Mercurial > repos > iuc > hmmer3
comparison test-data/globins.pfamtblout @ 0:62479bdcc059 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hmmer3 commit 4164b44c651bcbdac6637eccce61b2a802c9b569
| author | iuc |
|---|---|
| date | Tue, 12 May 2015 15:04:26 -0400 |
| parents | |
| children |
comparison
equal
deleted
inserted
replaced
| -1:000000000000 | 0:62479bdcc059 |
|---|---|
| 1 # Sequence scores | |
| 2 # --------------- | |
| 3 # | |
| 4 # name bits E-value n exp bias description | |
| 5 # ------------------- ------ --------- --- ----- ----- --------------------- | |
| 6 sp|P02185|MYG_PHYCD 222.7 1.8e-70 1 1.0 3.2 Myoglobin OS=Physeter catodon GN=MB PE=1 SV=2 | |
| 7 sp|P02024|HBB_GORGO 217.2 9.2e-69 1 1.0 0.1 Hemoglobin subunit beta OS=Gorilla gorilla gorilla GN=HBB PE=1 SV=2 | |
| 8 | |
| 9 # Domain scores | |
| 10 # ------------- | |
| 11 # | |
| 12 # name bits E-value hit bias env-st env-en ali-st ali-en hmm-st hmm-en description | |
| 13 # ------------------- ------ --------- ----- ----- ------ ------ ------ ------ ------ ------ --------------------- | |
| 14 sp|P02185|MYG_PHYCD 222.6 2e-70 1 3.2 1 148 2 148 2 149 Myoglobin OS=Physeter catodon GN=MB PE=1 SV=2 | |
| 15 sp|P02024|HBB_GORGO 217.0 1e-68 1 0.1 2 147 2 147 1 149 Hemoglobin subunit beta OS=Gorilla gorilla gorilla GN=HBB PE=1 SV=2 | |
| 16 # | |
| 17 # Program: hmmsearch | |
| 18 # Version: 3.1b1 (May 2013) | |
| 19 # Pipeline mode: SEARCH | |
| 20 # Query file: test-data/globins4.hmm | |
| 21 # Target file: test-data/uniprot_matches.fasta | |
| 22 # Option settings: hmmsearch --tblout test-data/globins.tblout --domtblout test-data/globins.domtblout --pfamtblout test-data/globins.pfamtblout --notextw -E 10 --domE 10 --F1 0.02 --F2 0.001 --F3 1e-05 --seed 4 --cpu 2 test-data/globins4.hmm test-data/uniprot_matches.fasta | |
| 23 # Current dir: /home/users/cpt/cpt/esr/Projects/galaxy/tools-iuc/tools/hmmer | |
| 24 # Date: Mon Feb 9 14:36:36 2015 | |
| 25 # [ok] |