Mercurial > repos > iuc > hmmer_alimask
comparison alimask.xml @ 8:3734a6ad6363 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hmmer3 commit 061757dd7b3bfe66b7738fd54bd6c5e135d9afe8
| author | iuc |
|---|---|
| date | Mon, 06 Nov 2023 20:25:57 +0000 |
| parents | b4dc65565864 |
| children | e3e5f208e93c |
comparison
equal
deleted
inserted
replaced
| 7:80c713789d13 | 8:3734a6ad6363 |
|---|---|
| 1 <?xml version="1.0"?> | 1 <?xml version="1.0"?> |
| 2 <tool id="hmmer_alimask" name="alimask" version="@TOOL_VERSION@"> | 2 <tool id="hmmer_alimask" name="alimask" version="@TOOL_VERSION@"> |
| 3 <description>append modelmask line to a multiple sequence alignments</description> | 3 <description>append modelmask line to a multiple sequence alignments</description> |
| 4 <macros> | 4 <macros> |
| 5 <import>macros.xml</import> | 5 <import>macros.xml</import> |
| 6 </macros> | 6 </macros> |
| 7 <expand macro="requirements"/> | 7 <expand macro="bio_tools"/> |
| 8 <expand macro="stdio"/> | 8 <expand macro="requirements"/> |
| 9 <command><![CDATA[ | 9 <expand macro="stdio"/> |
| 10 <command><![CDATA[ | |
| 10 alimask | 11 alimask |
| 11 | 12 |
| 12 #if $range_type.range_type_select == "model": | 13 #if $range_type.range_type_select == "model": |
| 13 #set range = ','.join( [ "%s-%s" % (str($range.modelrangestart), str($range.modelrangeend)) for $range in $range_type.modelranges]) | 14 #set range = ','.join( [ "%s-%s" % (str($range.modelrangestart), str($range.modelrangeend)) for $range in $range_type.modelranges]) |
| 14 --modelrange $range | 15 --modelrange $range |