Mercurial > repos > iuc > hmmer_hmmalign
comparison test-data/MADE1.out.pfamtblout @ 7:24fa8e890f08 draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hmmer3 commit 0bccf5220ed6549db7e053f85bbe917326b0a0be"
| author | iuc |
|---|---|
| date | Wed, 21 Jul 2021 14:15:36 +0000 |
| parents | b2453ee52845 |
| children |
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| 6:d430c68061f7 | 7:24fa8e890f08 |
|---|---|
| 1 # Sequence scores | 1 # Sequence scores |
| 2 # --------------- | 2 # --------------- |
| 3 # | 3 # |
| 4 # name bits E-value n exp bias description | 4 # name bits E-value n exp bias description |
| 5 # ------------------- ------ --------- --- ----- ----- --------------------- | 5 # ------------------- ------ --------- --- ----- ----- --------------------- |
| 6 MADE1 51.2 9.3e-18 4 8.6 26.3 MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon | |
| 7 | 6 |
| 8 # Domain scores | 7 # Domain scores |
| 9 # ------------- | 8 # ------------- |
| 10 # | 9 # |
| 11 # name bits E-value hit bias env-st env-en ali-st ali-en hmm-st hmm-en description | 10 # name bits E-value hit bias env-st env-en ali-st ali-en hmm-st hmm-en description |
| 12 # ------------------- ------ --------- ----- ----- ------ ------ ------ ------ ------ ------ --------------------- | 11 # ------------------- ------ --------- ----- ----- ------ ------ ------ ------ ------ ------ --------------------- |
| 13 MADE1 34.8 1.3e-12 3 0.7 302387 302466 302388 302466 2 80 MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon | |
| 14 MADE1 27.4 2.4e-10 1 0.6 174456 174520 174456 174498 1 43 MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon | |
| 15 MADE1 1.4 0.033 4 0.4 304029 304108 304060 304106 27 74 MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon | |
| 16 MADE1 -8.4 1 2 5.8 197272 197342 197274 197341 12 79 MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon | |
| 17 # | 12 # |
| 18 # Program: hmmscan | 13 # Program: hmmscan |
| 19 # Version: 3.3 (Nov 2019) | 14 # Version: 3.3.2 (Nov 2020) |
| 20 # Pipeline mode: SEARCH | 15 # Pipeline mode: SEARCH |
| 21 # Query file: /tmp/tmpqydies2m/files/5/d/3/dataset_5d34ccc7-9920-470e-9f13-678ab2ecd29d.dat | 16 # Query file: /tmp/tmpgjabmh94/files/d/c/f/dataset_dcfa47ad-e0da-4c8c-a808-c5bbd7eb2eda.dat |
| 22 # Target file: localref.hmm | 17 # Target file: localref.hmm |
| 23 # Option settings: hmmscan --tblout /tmp/tmpqydies2m/files/1/d/a/dataset_1da10e33-3e1c-48fc-abfb-7e3c263ec0df.dat --domtblout /tmp/tmpqydies2m/files/7/2/3/dataset_723f3cf1-e0de-4616-aec7-dd16680f3be3.dat --pfamtblout /tmp/tmpqydies2m/files/7/3/4/dataset_734c7f25-0a22-431b-9a7a-58849fcd6009.dat --notextw -E 10.0 --domE 10.0 --F1 0.02 --F2 0.001 --F3 1e-05 --seed 4 --cpu 1 localref.hmm /tmp/tmpqydies2m/files/5/d/3/dataset_5d34ccc7-9920-470e-9f13-678ab2ecd29d.dat | 18 # Option settings: hmmscan --tblout /tmp/tmpgjabmh94/files/9/8/3/dataset_9834554f-8f1e-4161-9c16-f4bd5042207c.dat --domtblout /tmp/tmpgjabmh94/files/8/e/b/dataset_8ebf81cb-d0c9-41a3-a725-c9e2f0d65d82.dat --pfamtblout /tmp/tmpgjabmh94/files/1/f/0/dataset_1f08bd39-0984-447e-b71e-7bf3442d708d.dat --notextw -E 10.0 --domE 10.0 --F1 0.02 --F2 0.001 --F3 1e-05 --seed 4 --cpu 0 localref.hmm /tmp/tmpgjabmh94/files/d/c/f/dataset_dcfa47ad-e0da-4c8c-a808-c5bbd7eb2eda.dat |
| 24 # Current dir: /tmp/tmpqydies2m/job_working_directory/000/8/working | 19 # Current dir: /tmp/tmpgjabmh94/job_working_directory/000/3/working |
| 25 # Date: Thu May 14 18:53:22 2020 | 20 # Date: Fri Jul 16 11:01:18 2021 |
| 26 # [ok] | 21 # [ok] |