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view test-data/MADE1.out.tblout @ 5:b2453ee52845 draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hmmer3 commit 7d31599a80c15f11ed00b2b3cbfb77ed6dfc8f3d"
author iuc
date Tue, 16 Jun 2020 05:29:04 -0400
parents ca0b674e895b
children 24fa8e890f08
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#                                                                         --- full sequence ---- --- best 1 domain ---- --- domain number estimation ----
# target name        accession   query name                    accession    E-value  score  bias   E-value  score  bias   exp reg clu  ov env dom rep inc description of target
#-------------------  ----------          -------------------- ---------- --------- ------ ----- --------- ------ -----   --- --- --- --- --- --- --- --- ---------------------
MADE1                DF0000629.2 humanchr1/239220001-239550000 -            9.3e-18   51.2  26.3   1.3e-12   34.8   0.7   8.6   4   0   0   4   4   4   2 MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
#
# Program:         hmmscan
# Version:         3.3 (Nov 2019)
# Pipeline mode:   SCAN
# Query file:      /tmp/tmpqydies2m/files/5/d/3/dataset_5d34ccc7-9920-470e-9f13-678ab2ecd29d.dat
# Target file:     localref.hmm
# Option settings: hmmscan --tblout /tmp/tmpqydies2m/files/1/d/a/dataset_1da10e33-3e1c-48fc-abfb-7e3c263ec0df.dat --domtblout /tmp/tmpqydies2m/files/7/2/3/dataset_723f3cf1-e0de-4616-aec7-dd16680f3be3.dat --pfamtblout /tmp/tmpqydies2m/files/7/3/4/dataset_734c7f25-0a22-431b-9a7a-58849fcd6009.dat --notextw -E 10.0 --domE 10.0 --F1 0.02 --F2 0.001 --F3 1e-05 --seed 4 --cpu 1 localref.hmm /tmp/tmpqydies2m/files/5/d/3/dataset_5d34ccc7-9920-470e-9f13-678ab2ecd29d.dat 
# Current dir:     /tmp/tmpqydies2m/job_working_directory/000/8/working
# Date:            Thu May 14 18:53:22 2020
# [ok]