Mercurial > repos > iuc > hmmer_hmmconvert
comparison test-data/globins.pfamtblout @ 5:8d5ec58d2172 draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hmmer3 commit 7d31599a80c15f11ed00b2b3cbfb77ed6dfc8f3d"
| author | iuc |
|---|---|
| date | Tue, 16 Jun 2020 05:37:52 -0400 |
| parents | f92edeb5e4c4 |
| children | db8a5a3195e7 |
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| 4:f92edeb5e4c4 | 5:8d5ec58d2172 |
|---|---|
| 1 # Sequence scores | 1 # Sequence scores |
| 2 # --------------- | 2 # --------------- |
| 3 # | 3 # |
| 4 # name bits E-value n exp bias description | 4 # name bits E-value n exp bias description |
| 5 # ------------------- ------ --------- --- ----- ----- --------------------- | 5 # ------------------- ------ --------- --- ----- ----- --------------------- |
| 6 sp|P02185|MYG_PHYCD 222.7 1.8e-70 1 1.0 3.2 Myoglobin OS=Physeter catodon GN=MB PE=1 SV=2 | 6 sp|P02024|HBB_GORGO 223.2 1.3e-70 1 1.0 0.1 Hemoglobin subunit beta OS=Gorilla gorilla gorilla GN=HBB PE=1 SV=2 |
| 7 sp|P02024|HBB_GORGO 217.2 9.2e-69 1 1.0 0.1 Hemoglobin subunit beta OS=Gorilla gorilla gorilla GN=HBB PE=1 SV=2 | 7 sp|P02185|MYG_PHYCD 221.1 5.8e-70 1 1.0 3.3 Myoglobin OS=Physeter catodon GN=MB PE=1 SV=2 |
| 8 | 8 |
| 9 # Domain scores | 9 # Domain scores |
| 10 # ------------- | 10 # ------------- |
| 11 # | 11 # |
| 12 # name bits E-value hit bias env-st env-en ali-st ali-en hmm-st hmm-en description | 12 # name bits E-value hit bias env-st env-en ali-st ali-en hmm-st hmm-en description |
| 13 # ------------------- ------ --------- ----- ----- ------ ------ ------ ------ ------ ------ --------------------- | 13 # ------------------- ------ --------- ----- ----- ------ ------ ------ ------ ------ ------ --------------------- |
| 14 sp|P02185|MYG_PHYCD 222.6 2e-70 1 3.2 1 148 2 148 2 149 Myoglobin OS=Physeter catodon GN=MB PE=1 SV=2 | 14 sp|P02024|HBB_GORGO 223.0 1.4e-70 1 0.1 2 147 2 147 1 149 Hemoglobin subunit beta OS=Gorilla gorilla gorilla GN=HBB PE=1 SV=2 |
| 15 sp|P02024|HBB_GORGO 217.0 1e-68 1 0.1 2 147 2 147 1 149 Hemoglobin subunit beta OS=Gorilla gorilla gorilla GN=HBB PE=1 SV=2 | 15 sp|P02185|MYG_PHYCD 220.9 6.4e-70 1 3.3 1 148 2 148 2 149 Myoglobin OS=Physeter catodon GN=MB PE=1 SV=2 |
| 16 # | 16 # |
| 17 # Program: hmmsearch | 17 # Program: hmmsearch |
| 18 # Version: 3.2 (June 2018) | 18 # Version: 3.3 (Nov 2019) |
| 19 # Pipeline mode: SEARCH | 19 # Pipeline mode: SEARCH |
| 20 # Query file: /tmp/tmpp4O0Ju/files/000/dataset_25.dat | 20 # Query file: /tmp/tmpqydies2m/files/6/d/6/dataset_6d69e63c-e7d8-450d-b7f8-3e08a51472f0.dat |
| 21 # Target file: /tmp/tmpp4O0Ju/files/000/dataset_26.dat | 21 # Target file: /tmp/tmpqydies2m/files/8/2/8/dataset_8282288a-91ea-4a46-89c2-d1f3b4e67c52.dat |
| 22 # Option settings: hmmsearch --tblout /tmp/tmpp4O0Ju/files/000/dataset_28.dat --domtblout /tmp/tmpp4O0Ju/files/000/dataset_29.dat --pfamtblout /tmp/tmpp4O0Ju/files/000/dataset_30.dat --notextw -E 10.0 --domE 10.0 --F1 0.02 --F2 0.001 --F3 1e-05 --seed 4 --cpu 1 /tmp/tmpp4O0Ju/files/000/dataset_25.dat /tmp/tmpp4O0Ju/files/000/dataset_26.dat | 22 # Option settings: hmmsearch --tblout /tmp/tmpqydies2m/files/4/6/b/dataset_46bff7ad-a6de-481d-adb4-50ccab8aacb8.dat --domtblout /tmp/tmpqydies2m/files/b/2/5/dataset_b258e52b-de8c-4e23-86d8-c69ebf229c95.dat --pfamtblout /tmp/tmpqydies2m/files/f/b/8/dataset_fb8cde04-dee0-4b38-9125-bf4766986c0c.dat --notextw -E 10.0 --domE 10.0 --F1 0.02 --F2 0.001 --F3 1e-05 --seed 4 --cpu 1 /tmp/tmpqydies2m/files/6/d/6/dataset_6d69e63c-e7d8-450d-b7f8-3e08a51472f0.dat /tmp/tmpqydies2m/files/8/2/8/dataset_8282288a-91ea-4a46-89c2-d1f3b4e67c52.dat |
| 23 # Current dir: /tmp/tmpp4O0Ju/job_working_directory/000/24/working | 23 # Current dir: /tmp/tmpqydies2m/job_working_directory/000/11/working |
| 24 # Date: Fri Jun 8 12:18:13 2018 | 24 # Date: Thu May 14 18:54:00 2020 |
| 25 # [ok] | 25 # [ok] |