diff test-data/MADE1.nhmmscan_out.tblout @ 5:8d5ec58d2172 draft

"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hmmer3 commit 7d31599a80c15f11ed00b2b3cbfb77ed6dfc8f3d"
author iuc
date Tue, 16 Jun 2020 05:37:52 -0400
parents f92edeb5e4c4
children db8a5a3195e7
line wrap: on
line diff
--- a/test-data/MADE1.nhmmscan_out.tblout	Mon Jun 11 15:52:53 2018 -0400
+++ b/test-data/MADE1.nhmmscan_out.tblout	Tue Jun 16 05:37:52 2020 -0400
@@ -1,17 +1,17 @@
 # target name        accession   query name                    accession  hmmfrom hmm to alifrom  ali to envfrom  env to  modlen strand   E-value  score  bias  description of target
 #-------------------  ----------          -------------------- ---------- ------- ------- ------- ------- ------- ------- ------- ------ --------- ------ ----- ---------------------
-MADE1                DF0000629.2 humanchr1/239220001-239550000 -                4      80  302390  302466  302387  302466      80    +     8.7e-11   39.2   7.4  MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
-MADE1                DF0000629.2 humanchr1/239220001-239550000 -                1      43  174456  174498  174456  174518      80    +     6.4e-08   30.0   8.3  MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
-MADE1                DF0000629.2 humanchr1/239220001-239550000 -                1      77  302466  302390  302466  302387      80    -     9.3e-08   29.5   6.1  MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
-MADE1                DF0000629.2 humanchr1/239220001-239550000 -               43      80  174493  174456  174513  174456      80    -     6.3e-06   23.7   7.0  MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
-MADE1                DF0000629.2 humanchr1/239220001-239550000 -               41      72  304073  304104  304053  304109      80    +         1.4    6.5   7.0  MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
+MADE1                DF0000629.2 humanchr1/239220001-239550000 -                4      80  302390  302466  302387  302466      80    +       4e-11   41.3   7.5  MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
+MADE1                DF0000629.2 humanchr1/239220001-239550000 -                1      43  174456  174498  174456  174518      80    +     1.9e-08   32.8   8.3  MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
+MADE1                DF0000629.2 humanchr1/239220001-239550000 -                1      78  302466  302389  302466  302387      80    -     6.3e-08   31.0   6.7  MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
+MADE1                DF0000629.2 humanchr1/239220001-239550000 -               43      80  174493  174456  174513  174456      80    -     4.9e-06   25.0   7.0  MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
+MADE1                DF0000629.2 humanchr1/239220001-239550000 -               41      71  304073  304103  304053  304109      80    +         2.2    6.9   7.2  MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
 #
 # Program:         hmmscan
-# Version:         3.2 (June 2018)
+# Version:         3.3 (Nov 2019)
 # Pipeline mode:   SCAN
-# Query file:      /tmp/tmpp4O0Ju/files/000/dataset_41.dat
+# Query file:      /tmp/tmpqydies2m/files/f/a/5/dataset_fa559c91-0436-48cb-a47d-20062d4af284.dat
 # Target file:     localref.hmm
-# Option settings: nhmmscan --tblout /tmp/tmpp4O0Ju/files/000/dataset_43.dat --dfamtblout /tmp/tmpp4O0Ju/files/000/dataset_44.dat --notextw -E 10.0 --F1 0.02 --F2 0.001 --F3 1e-05 --seed 4 --B1 110 --B2 240 --B3 1000 --cpu 1 localref.hmm /tmp/tmpp4O0Ju/files/000/dataset_41.dat 
-# Current dir:     /tmp/tmpp4O0Ju/job_working_directory/000/33/working
-# Date:            Fri Jun  8 12:19:16 2018
+# Option settings: nhmmscan --tblout /tmp/tmpqydies2m/files/4/7/2/dataset_4723128d-8711-4edb-8afe-a68476a6c127.dat --dfamtblout /tmp/tmpqydies2m/files/1/a/e/dataset_1aeea50b-1263-4750-8237-4fc3f10c0999.dat --notextw -E 10.0 --F1 0.02 --F2 0.001 --F3 1e-05 --seed 4 --B1 110 --B2 240 --B3 1000 --cpu 1 localref.hmm /tmp/tmpqydies2m/files/f/a/5/dataset_fa559c91-0436-48cb-a47d-20062d4af284.dat 
+# Current dir:     /tmp/tmpqydies2m/job_working_directory/000/20/working
+# Date:            Thu May 14 18:55:28 2020
 # [ok]