Mercurial > repos > iuc > hmmer_hmmconvert
view test-data/globins.pfamtblout @ 5:8d5ec58d2172 draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hmmer3 commit 7d31599a80c15f11ed00b2b3cbfb77ed6dfc8f3d"
| author | iuc |
|---|---|
| date | Tue, 16 Jun 2020 05:37:52 -0400 |
| parents | f92edeb5e4c4 |
| children | db8a5a3195e7 |
line wrap: on
line source
# Sequence scores # --------------- # # name bits E-value n exp bias description # ------------------- ------ --------- --- ----- ----- --------------------- sp|P02024|HBB_GORGO 223.2 1.3e-70 1 1.0 0.1 Hemoglobin subunit beta OS=Gorilla gorilla gorilla GN=HBB PE=1 SV=2 sp|P02185|MYG_PHYCD 221.1 5.8e-70 1 1.0 3.3 Myoglobin OS=Physeter catodon GN=MB PE=1 SV=2 # Domain scores # ------------- # # name bits E-value hit bias env-st env-en ali-st ali-en hmm-st hmm-en description # ------------------- ------ --------- ----- ----- ------ ------ ------ ------ ------ ------ --------------------- sp|P02024|HBB_GORGO 223.0 1.4e-70 1 0.1 2 147 2 147 1 149 Hemoglobin subunit beta OS=Gorilla gorilla gorilla GN=HBB PE=1 SV=2 sp|P02185|MYG_PHYCD 220.9 6.4e-70 1 3.3 1 148 2 148 2 149 Myoglobin OS=Physeter catodon GN=MB PE=1 SV=2 # # Program: hmmsearch # Version: 3.3 (Nov 2019) # Pipeline mode: SEARCH # Query file: /tmp/tmpqydies2m/files/6/d/6/dataset_6d69e63c-e7d8-450d-b7f8-3e08a51472f0.dat # Target file: /tmp/tmpqydies2m/files/8/2/8/dataset_8282288a-91ea-4a46-89c2-d1f3b4e67c52.dat # Option settings: hmmsearch --tblout /tmp/tmpqydies2m/files/4/6/b/dataset_46bff7ad-a6de-481d-adb4-50ccab8aacb8.dat --domtblout /tmp/tmpqydies2m/files/b/2/5/dataset_b258e52b-de8c-4e23-86d8-c69ebf229c95.dat --pfamtblout /tmp/tmpqydies2m/files/f/b/8/dataset_fb8cde04-dee0-4b38-9125-bf4766986c0c.dat --notextw -E 10.0 --domE 10.0 --F1 0.02 --F2 0.001 --F3 1e-05 --seed 4 --cpu 1 /tmp/tmpqydies2m/files/6/d/6/dataset_6d69e63c-e7d8-450d-b7f8-3e08a51472f0.dat /tmp/tmpqydies2m/files/8/2/8/dataset_8282288a-91ea-4a46-89c2-d1f3b4e67c52.dat # Current dir: /tmp/tmpqydies2m/job_working_directory/000/11/working # Date: Thu May 14 18:54:00 2020 # [ok]