Mercurial > repos > iuc > hmmer_hmmconvert
view test-data/jackhmmer.domtblout @ 5:8d5ec58d2172 draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hmmer3 commit 7d31599a80c15f11ed00b2b3cbfb77ed6dfc8f3d"
| author | iuc |
|---|---|
| date | Tue, 16 Jun 2020 05:37:52 -0400 |
| parents | f92edeb5e4c4 |
| children | db8a5a3195e7 |
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# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- HBB_MANSP - 146 sp|P02185|MYG_PHYCD - 154 1.5e-69 224.0 0.1 1 1 1.7e-69 1.7e-69 223.9 0.1 3 147 3 145 1 146 0.99 - HBB_URSMA - 146 sp|P02185|MYG_PHYCD - 154 4.6e-69 222.5 0.2 1 1 5e-69 5e-69 222.3 0.2 3 147 3 145 1 146 0.99 - HBB_RABIT - 146 sp|P02185|MYG_PHYCD - 154 2.5e-68 220.1 0.6 1 1 2.7e-68 2.7e-68 220.0 0.6 3 147 3 145 1 146 0.99 - HBB_SUNMU - 146 sp|P02185|MYG_PHYCD - 154 7.6e-68 218.5 0.0 1 1 8.3e-68 8.3e-68 218.4 0.0 3 147 3 145 1 146 0.99 - HBB_COLLI - 146 sp|P02185|MYG_PHYCD - 154 9.5e-68 218.2 0.0 1 1 1.1e-67 1.1e-67 217.9 0.0 4 147 4 145 2 146 0.99 - HBB_EQUHE - 146 sp|P02185|MYG_PHYCD - 154 1.4e-67 217.6 0.1 1 1 1.6e-67 1.6e-67 217.5 0.1 3 147 3 145 1 146 0.98 - HBB_TACAC - 146 sp|P02185|MYG_PHYCD - 154 1.5e-67 217.6 0.3 1 1 1.6e-67 1.6e-67 217.4 0.3 3 147 3 145 1 146 0.99 - HBB_SPECI - 146 sp|P02185|MYG_PHYCD - 154 3.3e-67 216.5 0.7 1 1 3.6e-67 3.6e-67 216.3 0.7 3 147 3 145 1 146 0.98 - HBB_CALAR - 146 sp|P02185|MYG_PHYCD - 154 3.4e-67 216.4 0.1 1 1 3.8e-67 3.8e-67 216.3 0.1 3 147 3 145 1 146 0.99 - HBB_SPETO - 146 sp|P02185|MYG_PHYCD - 154 3.7e-67 216.3 0.4 1 1 4.1e-67 4.1e-67 216.1 0.4 3 147 3 145 1 146 0.98 - HBB_ORNAN - 146 sp|P02185|MYG_PHYCD - 154 6.6e-67 215.5 0.0 1 1 7.2e-67 7.2e-67 215.3 0.0 3 147 3 145 1 146 0.99 - HBE_PONPY - 146 sp|P02185|MYG_PHYCD - 154 8.4e-67 215.1 0.3 1 1 9.2e-67 9.2e-67 215.0 0.3 4 147 4 145 1 146 0.98 - MYG_ESCGI - 153 sp|P02185|MYG_PHYCD - 154 2.3e-66 213.7 1.7 1 1 2.6e-66 2.6e-66 213.5 1.7 2 154 1 153 1 153 1.00 - HBB_TRIIN - 146 sp|P02185|MYG_PHYCD - 154 2.9e-66 213.4 0.1 1 1 3.2e-66 3.2e-66 213.2 0.1 3 147 3 145 1 146 0.99 - HBB_LARRI - 146 sp|P02185|MYG_PHYCD - 154 5.3e-66 212.5 0.0 1 1 6.4e-66 6.4e-66 212.3 0.0 4 147 4 145 2 146 0.99 - MYG_LYCPI - 153 sp|P02185|MYG_PHYCD - 154 8.7e-66 211.8 1.6 1 1 9.6e-66 9.6e-66 211.7 1.6 3 154 2 153 1 153 1.00 - MYG_PROGU - 153 sp|P02185|MYG_PHYCD - 154 1.8e-65 210.8 0.2 1 1 2e-65 2e-65 210.6 0.2 3 154 2 153 1 153 1.00 - MYG_SAISC - 153 sp|P02185|MYG_PHYCD - 154 2.5e-65 210.3 0.9 1 1 2.8e-65 2.8e-65 210.2 0.9 3 154 2 153 1 153 1.00 - MYG_HORSE - 153 sp|P02185|MYG_PHYCD - 154 2.6e-65 210.3 0.8 1 1 2.9e-65 2.9e-65 210.1 0.8 3 154 2 153 1 153 1.00 - HBA_MESAU - 141 sp|P02185|MYG_PHYCD - 154 9.1e-65 208.5 0.2 1 1 1e-64 1e-64 208.4 0.2 2 148 1 141 1 141 0.99 - MYG_MOUSE - 153 sp|P02185|MYG_PHYCD - 154 1.3e-64 208.0 0.3 1 1 1.4e-64 1.4e-64 207.9 0.3 3 154 2 153 1 153 1.00 - HBB_TUPGL - 146 sp|P02185|MYG_PHYCD - 154 1.5e-64 207.8 0.0 1 1 1.7e-64 1.7e-64 207.6 0.0 3 147 3 145 1 146 0.98 - HBA_PONPY - 141 sp|P02185|MYG_PHYCD - 154 1.3e-63 204.7 0.5 1 1 1.5e-63 1.5e-63 204.6 0.5 2 148 1 141 1 141 0.99 - HBA_MACFA - 141 sp|P02185|MYG_PHYCD - 154 2.9e-63 203.6 0.2 1 1 3.2e-63 3.2e-63 203.5 0.2 2 148 1 141 1 141 0.99 - HBA_MACSI - 141 sp|P02185|MYG_PHYCD - 154 4e-63 203.2 0.2 1 1 4.4e-63 4.4e-63 203.0 0.2 2 148 1 141 1 141 0.99 - HBB1_VAREX - 146 sp|P02185|MYG_PHYCD - 154 5e-63 202.9 0.1 1 1 5.9e-63 5.9e-63 202.6 0.1 4 147 4 145 2 146 0.98 - HBA_AILME - 141 sp|P02185|MYG_PHYCD - 154 5.7e-63 202.7 0.1 1 1 6.4e-63 6.4e-63 202.5 0.1 2 148 1 141 1 141 0.99 - HBA2_BOSMU - 141 sp|P02185|MYG_PHYCD - 154 8.6e-63 202.1 0.3 1 1 9.6e-63 9.6e-63 201.9 0.3 2 148 1 141 1 141 0.99 - HBA_FRAPO - 141 sp|P02185|MYG_PHYCD - 154 1.8e-62 201.0 0.3 1 1 2e-62 2e-62 200.9 0.3 2 148 1 141 1 141 0.99 - HBA2_GALCR - 141 sp|P02185|MYG_PHYCD - 154 1.9e-62 201.0 0.4 1 1 2.1e-62 2.1e-62 200.8 0.4 2 148 1 141 1 141 0.99 - HBA_PHACO - 141 sp|P02185|MYG_PHYCD - 154 2.1e-62 200.8 0.3 1 1 2.4e-62 2.4e-62 200.7 0.3 2 148 1 141 1 141 0.99 - HBA_ANSSE - 141 sp|P02185|MYG_PHYCD - 154 4e-62 199.9 0.3 1 1 4.4e-62 4.4e-62 199.8 0.3 2 148 1 141 1 141 0.99 - HBA_ERIEU - 141 sp|P02185|MYG_PHYCD - 154 4e-62 199.9 0.1 1 1 4.5e-62 4.5e-62 199.8 0.1 2 148 1 141 1 141 0.99 - HBA_PAGLA - 141 sp|P02185|MYG_PHYCD - 154 8.3e-62 198.9 0.3 1 1 9.2e-62 9.2e-62 198.8 0.3 2 148 1 141 1 141 0.99 - HBA_PROLO - 141 sp|P02185|MYG_PHYCD - 154 9.5e-62 198.7 0.0 1 1 1.1e-61 1.1e-61 198.6 0.0 2 148 1 141 1 141 0.99 - HBA_TRIOC - 141 sp|P02185|MYG_PHYCD - 154 2.2e-61 197.5 0.4 1 1 2.4e-61 2.4e-61 197.4 0.4 2 148 1 141 1 141 0.99 - HBAD_CHLME - 141 sp|P02185|MYG_PHYCD - 154 1.2e-60 195.1 0.5 1 1 1.3e-60 1.3e-60 195.0 0.5 3 148 2 141 1 141 0.99 - HBAZ_HORSE - 141 sp|P02185|MYG_PHYCD - 154 4.1e-60 193.4 0.1 1 1 4.5e-60 4.5e-60 193.3 0.1 3 148 2 141 1 141 0.99 - HBA_COLLI - 141 sp|P02185|MYG_PHYCD - 154 6e-60 192.9 0.2 1 1 6.7e-60 6.7e-60 192.7 0.2 2 148 1 141 1 141 0.99 - HBBL_RANCA - 146 sp|P02185|MYG_PHYCD - 154 1.7e-59 191.4 0.2 1 1 2e-59 2e-59 191.2 0.2 4 147 4 145 2 146 0.98 - HBAD_PASMO - 141 sp|P02185|MYG_PHYCD - 154 2.2e-59 191.0 0.1 1 1 2.4e-59 2.4e-59 190.9 0.1 3 148 2 141 1 141 0.99 - HBB2_XENTR - 146 sp|P02185|MYG_PHYCD - 154 1.1e-58 188.8 0.6 1 1 1.3e-58 1.3e-58 188.6 0.6 4 147 4 145 2 146 0.98 - HBA4_SALIR - 142 sp|P02185|MYG_PHYCD - 154 5.3e-56 180.0 0.1 1 1 5.9e-56 5.9e-56 179.9 0.1 3 148 2 142 1 142 0.99 - MYG_MUSAN - 148 sp|P02185|MYG_PHYCD - 154 2.5e-54 174.6 0.4 1 1 2.8e-54 2.8e-54 174.5 0.4 7 154 2 148 1 148 0.99 - HBB2_TRICR - 145 sp|P02185|MYG_PHYCD - 154 2e-52 168.4 0.0 1 1 2.2e-52 2.2e-52 168.3 0.0 3 147 3 145 1 145 0.99 - HBB_MANSP - 146 sp|P02024|HBB_GORGO - 147 2.3e-75 242.8 0.1 1 1 2.6e-75 2.6e-75 242.6 0.1 2 147 1 146 1 146 1.00 - HBB_URSMA - 146 sp|P02024|HBB_GORGO - 147 1.1e-74 240.6 0.3 1 1 1.2e-74 1.2e-74 240.5 0.3 2 147 1 146 1 146 1.00 - HBB_RABIT - 146 sp|P02024|HBB_GORGO - 147 1.4e-73 237.0 0.9 1 1 1.5e-73 1.5e-73 236.9 0.9 2 147 1 146 1 146 1.00 - HBB_CALAR - 146 sp|P02024|HBB_GORGO - 147 4.1e-73 235.5 0.2 1 1 4.5e-73 4.5e-73 235.4 0.2 2 147 1 146 1 146 1.00 - HBB_SUNMU - 146 sp|P02024|HBB_GORGO - 147 4.2e-73 235.4 0.1 1 1 4.7e-73 4.7e-73 235.3 0.1 2 147 1 146 1 146 1.00 - HBB_COLLI - 146 sp|P02024|HBB_GORGO - 147 7.8e-73 234.6 0.0 1 1 8.7e-73 8.7e-73 234.4 0.0 2 147 1 146 1 146 1.00 - HBB_TACAC - 146 sp|P02024|HBB_GORGO - 147 1.9e-72 233.3 0.4 1 1 2.1e-72 2.1e-72 233.2 0.4 2 147 1 146 1 146 1.00 - HBE_PONPY - 146 sp|P02024|HBB_GORGO - 147 3.1e-72 232.6 0.4 1 1 3.4e-72 3.4e-72 232.5 0.4 2 147 1 146 1 146 1.00 - HBB_EQUHE - 146 sp|P02024|HBB_GORGO - 147 3.5e-72 232.5 0.2 1 1 3.8e-72 3.8e-72 232.3 0.2 2 147 1 146 1 146 0.99 - HBB_SPECI - 146 sp|P02024|HBB_GORGO - 147 1.1e-71 230.8 1.0 1 1 1.3e-71 1.3e-71 230.7 1.0 2 147 1 146 1 146 1.00 - HBB_SPETO - 146 sp|P02024|HBB_GORGO - 147 1.6e-71 230.3 0.6 1 1 1.7e-71 1.7e-71 230.2 0.6 2 147 1 146 1 146 1.00 - HBB_TRIIN - 146 sp|P02024|HBB_GORGO - 147 2.6e-71 229.6 0.1 1 1 2.9e-71 2.9e-71 229.5 0.1 2 147 1 146 1 146 1.00 - HBB_ORNAN - 146 sp|P02024|HBB_GORGO - 147 2.9e-71 229.5 0.0 1 1 3.2e-71 3.2e-71 229.4 0.0 2 147 1 146 1 146 1.00 - HBB_LARRI - 146 sp|P02024|HBB_GORGO - 147 5.2e-71 228.7 0.0 1 1 5.7e-71 5.7e-71 228.5 0.0 2 147 1 146 1 146 1.00 - HBB_TUPGL - 146 sp|P02024|HBB_GORGO - 147 1.1e-69 224.3 0.0 1 1 1.3e-69 1.3e-69 224.2 0.0 2 147 1 146 1 146 1.00 - HBB1_VAREX - 146 sp|P02024|HBB_GORGO - 147 1.5e-68 220.7 0.1 1 1 1.6e-68 1.6e-68 220.5 0.1 2 147 1 146 1 146 1.00 - HBBL_RANCA - 146 sp|P02024|HBB_GORGO - 147 7.6e-65 208.7 0.3 1 1 8.5e-65 8.5e-65 208.5 0.3 2 147 1 146 1 146 1.00 - HBB2_XENTR - 146 sp|P02024|HBB_GORGO - 147 2.5e-63 203.7 0.9 1 1 2.8e-63 2.8e-63 203.6 0.9 2 146 1 145 1 146 1.00 - HBA_MESAU - 141 sp|P02024|HBB_GORGO - 147 6.9e-63 202.3 0.3 1 1 7.5e-63 7.5e-63 202.2 0.3 4 146 2 140 1 141 0.99 - HBA_PONPY - 141 sp|P02024|HBB_GORGO - 147 1.1e-61 198.4 0.7 1 1 1.2e-61 1.2e-61 198.3 0.7 4 146 2 140 1 141 0.98 - HBA_MACFA - 141 sp|P02024|HBB_GORGO - 147 1.8e-61 197.7 0.3 1 1 1.9e-61 1.9e-61 197.6 0.3 4 146 2 140 1 141 0.99 - HBA_MACSI - 141 sp|P02024|HBB_GORGO - 147 2.6e-61 197.2 0.3 1 1 2.8e-61 2.8e-61 197.1 0.3 4 146 2 140 1 141 0.99 - HBA_AILME - 141 sp|P02024|HBB_GORGO - 147 3.6e-61 196.8 0.1 1 1 3.9e-61 3.9e-61 196.6 0.1 4 146 2 140 1 141 0.99 - HBA_PHACO - 141 sp|P02024|HBB_GORGO - 147 1.2e-60 195.1 0.4 1 1 1.3e-60 1.3e-60 194.9 0.4 4 146 2 140 1 141 0.99 - HBA2_BOSMU - 141 sp|P02024|HBB_GORGO - 147 1.2e-60 195.1 0.4 1 1 1.3e-60 1.3e-60 194.9 0.4 4 146 2 140 1 141 0.99 - HBA_FRAPO - 141 sp|P02024|HBB_GORGO - 147 1.2e-60 195.0 0.4 1 1 1.4e-60 1.4e-60 194.9 0.4 4 146 2 140 1 141 0.98 - HBA2_GALCR - 141 sp|P02024|HBB_GORGO - 147 1.4e-60 194.8 0.6 1 1 1.6e-60 1.6e-60 194.7 0.6 4 146 2 140 1 141 0.98 - HBA_ERIEU - 141 sp|P02024|HBB_GORGO - 147 4.5e-60 193.2 0.1 1 1 4.9e-60 4.9e-60 193.1 0.1 4 146 2 140 1 141 0.98 - HBA_PROLO - 141 sp|P02024|HBB_GORGO - 147 5.1e-60 193.0 0.0 1 1 5.6e-60 5.6e-60 192.9 0.0 4 146 2 140 1 141 0.99 - HBA_ANSSE - 141 sp|P02024|HBB_GORGO - 147 7.4e-60 192.5 0.4 1 1 8.1e-60 8.1e-60 192.3 0.4 4 146 2 140 1 141 0.99 - HBA_PAGLA - 141 sp|P02024|HBB_GORGO - 147 7.4e-60 192.5 0.5 1 1 8.1e-60 8.1e-60 192.3 0.5 4 146 2 140 1 141 0.98 - HBA_TRIOC - 141 sp|P02024|HBB_GORGO - 147 4.5e-59 189.9 0.5 1 1 5e-59 5e-59 189.8 0.5 4 146 2 140 1 141 0.98 - HBAD_CHLME - 141 sp|P02024|HBB_GORGO - 147 6e-59 189.5 0.5 1 1 6.6e-59 6.6e-59 189.4 0.5 4 146 2 140 1 141 0.98 - HBAZ_HORSE - 141 sp|P02024|HBB_GORGO - 147 2.2e-58 187.7 0.1 1 1 2.5e-58 2.5e-58 187.5 0.1 4 146 2 140 1 141 0.98 - HBAD_PASMO - 141 sp|P02024|HBB_GORGO - 147 2.4e-58 187.6 0.1 1 1 2.7e-58 2.7e-58 187.4 0.1 4 146 2 140 1 141 0.98 - HBA_COLLI - 141 sp|P02024|HBB_GORGO - 147 2.5e-58 187.5 0.2 1 1 2.8e-58 2.8e-58 187.4 0.2 4 146 2 140 1 141 0.98 - HBB2_TRICR - 145 sp|P02024|HBB_GORGO - 147 1.9e-56 181.4 0.0 1 1 2.2e-56 2.2e-56 181.2 0.0 2 146 1 145 1 145 1.00 - HBA4_SALIR - 142 sp|P02024|HBB_GORGO - 147 5.3e-56 180.0 0.1 1 1 5.8e-56 5.8e-56 179.8 0.1 4 146 2 141 1 142 0.98 - MYG_LYCPI - 153 sp|P02024|HBB_GORGO - 147 9.5e-56 179.1 1.8 1 1 1.1e-55 1.1e-55 179.0 1.8 4 146 2 146 1 147 0.97 - MYG_SAISC - 153 sp|P02024|HBB_GORGO - 147 1.3e-55 178.7 1.0 1 1 1.4e-55 1.4e-55 178.6 1.0 4 146 2 146 1 147 0.98 - MYG_ESCGI - 153 sp|P02024|HBB_GORGO - 147 3.1e-55 177.5 2.2 1 1 3.4e-55 3.4e-55 177.3 2.2 4 146 2 146 1 147 0.97 - MYG_PROGU - 153 sp|P02024|HBB_GORGO - 147 5.1e-55 176.8 0.2 1 1 5.7e-55 5.7e-55 176.6 0.2 4 146 2 146 1 147 0.97 - MYG_HORSE - 153 sp|P02024|HBB_GORGO - 147 9.3e-55 175.9 1.0 1 1 1e-54 1e-54 175.8 1.0 4 146 2 146 1 147 0.97 - MYG_MOUSE - 153 sp|P02024|HBB_GORGO - 147 1.4e-54 175.3 0.3 1 1 1.6e-54 1.6e-54 175.2 0.3 4 146 2 146 1 147 0.97 - MYG_MUSAN - 148 sp|P02024|HBB_GORGO - 147 1.6e-44 142.7 0.3 1 1 1.8e-44 1.8e-44 142.6 0.3 8 146 2 141 1 142 0.96 - # # Program: jackhmmer # Version: 3.3 (Nov 2019) # Pipeline mode: SEARCH # Query file: /tmp/tmpfvu1k4r6/files/e/a/d/dataset_ead1ef79-dd40-459b-b072-01fc401e229a.dat # Target file: /tmp/tmpfvu1k4r6/files/c/9/e/dataset_c9eb6990-14c2-41da-9304-1bdf155f29e9.dat # Option settings: jackhmmer -N 5 --tblout /tmp/tmpfvu1k4r6/files/c/c/a/dataset_cca87e56-6fd4-49f3-b29f-dca9b665fb4e.dat --domtblout /tmp/tmpfvu1k4r6/files/a/9/3/dataset_a93530ef-2a8d-4611-9764-b317aa42a6b4.dat --notextw -E 10.0 --domE 10.0 --F1 0.02 --F2 0.001 --F3 1e-05 --wpb --EmL 200 --EmN 200 --EvL 200 --EvN 200 --EfL 100 --EfN 200 --Eft 0.04 --seed 4 --cpu 1 /tmp/tmpfvu1k4r6/files/e/a/d/dataset_ead1ef79-dd40-459b-b072-01fc401e229a.dat /tmp/tmpfvu1k4r6/files/c/9/e/dataset_c9eb6990-14c2-41da-9304-1bdf155f29e9.dat # Current dir: /tmp/tmpfvu1k4r6/job_working_directory/000/3/working # Date: Thu May 14 18:30:01 2020 # [ok]