Mercurial > repos > iuc > hmmer_hmmemit

view test-data/globins.pfamtblout @ 5:9415f29a3926 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hmmer3 commit 7d31599a80c15f11ed00b2b3cbfb77ed6dfc8f3d"
author iuc
date Tue, 16 Jun 2020 05:27:39 -0400
parents 1cd4d0cf8fd9
children 96b127c59e6a
line wrap: on
line source

# Sequence scores
# ---------------
#
# name                  bits   E-value   n   exp  bias    description
# ------------------- ------ --------- --- ----- -----    ---------------------
sp|P02024|HBB_GORGO    223.2   1.3e-70   1   1.0   0.1    Hemoglobin subunit beta OS=Gorilla gorilla gorilla GN=HBB PE=1 SV=2
sp|P02185|MYG_PHYCD    221.1   5.8e-70   1   1.0   3.3    Myoglobin OS=Physeter catodon GN=MB PE=1 SV=2

# Domain scores
# -------------
#
#  name                 bits   E-value   hit  bias env-st env-en ali-st ali-en hmm-st hmm-en     description
# ------------------- ------ --------- ----- ----- ------ ------ ------ ------ ------ ------      ---------------------
sp|P02024|HBB_GORGO    223.0   1.4e-70     1   0.1      2    147      2    147      1    149     Hemoglobin subunit beta OS=Gorilla gorilla gorilla GN=HBB PE=1 SV=2
sp|P02185|MYG_PHYCD    220.9   6.4e-70     1   3.3      1    148      2    148      2    149     Myoglobin OS=Physeter catodon GN=MB PE=1 SV=2
#
# Program:         hmmsearch
# Version:         3.3 (Nov 2019)
# Pipeline mode:   SEARCH
# Query file:      /tmp/tmpqydies2m/files/6/d/6/dataset_6d69e63c-e7d8-450d-b7f8-3e08a51472f0.dat
# Target file:     /tmp/tmpqydies2m/files/8/2/8/dataset_8282288a-91ea-4a46-89c2-d1f3b4e67c52.dat
# Option settings: hmmsearch --tblout /tmp/tmpqydies2m/files/4/6/b/dataset_46bff7ad-a6de-481d-adb4-50ccab8aacb8.dat --domtblout /tmp/tmpqydies2m/files/b/2/5/dataset_b258e52b-de8c-4e23-86d8-c69ebf229c95.dat --pfamtblout /tmp/tmpqydies2m/files/f/b/8/dataset_fb8cde04-dee0-4b38-9125-bf4766986c0c.dat --notextw -E 10.0 --domE 10.0 --F1 0.02 --F2 0.001 --F3 1e-05 --seed 4 --cpu 1 /tmp/tmpqydies2m/files/6/d/6/dataset_6d69e63c-e7d8-450d-b7f8-3e08a51472f0.dat /tmp/tmpqydies2m/files/8/2/8/dataset_8282288a-91ea-4a46-89c2-d1f3b4e67c52.dat 
# Current dir:     /tmp/tmpqydies2m/job_working_directory/000/11/working
# Date:            Thu May 14 18:54:00 2020
# [ok]