Mercurial > repos > iuc > hmmer_hmmfetch

comparison hmmfetch.xml @ 8:1fca13688921 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hmmer3 commit 061757dd7b3bfe66b7738fd54bd6c5e135d9afe8
author iuc
date Mon, 06 Nov 2023 20:23:52 +0000
parents cd078bda9921
children 34b09461bf87
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7:a28fd001de59 8:1fca13688921
1 <?xml version="1.0"?> 1 <?xml version="1.0"?>
2 <tool id="hmmer_hmmfetch" name="hmmfetch" version="@TOOL_VERSION@"> 2 <tool id="hmmer_hmmfetch" name="hmmfetch" version="@TOOL_VERSION@">
3 <description>retrieve profile HMM(s) from a file</description> 3 <description>retrieve profile HMM(s) from a file</description>
4 <macros> 4 <macros>
5 <import>macros.xml</import> 5 <import>macros.xml</import>
6 </macros> 6 </macros>
7 <expand macro="requirements"/> 7 <expand macro="bio_tools"/>
8 <expand macro="stdio"/> 8 <expand macro="requirements"/>
9 <command><![CDATA[ 9 <expand macro="stdio"/>
10 <command><![CDATA[
10 hmmfetch -f '$hmmfile' '$keyfile' > '$output' 11 hmmfetch -f '$hmmfile' '$keyfile' > '$output'
11 ]]></command> 12 ]]></command>
12 <inputs> 13 <inputs>
13 <!-- TODO: implement auto-indexing --> 14 <!-- TODO: implement auto-indexing -->
14 <expand macro="input_hmm" /> 15 <expand macro="input_hmm" />