comparison hmmfetch.xml @ 9:34b09461bf87 draft default tip

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hmmer3 commit 721504306833ba97c91f285e5bfd86efc04875ee
author iuc
date Sun, 25 Feb 2024 18:33:41 +0000
parents 1fca13688921
children
comparison
equal deleted inserted replaced
8:1fca13688921 9:34b09461bf87
1 <?xml version="1.0"?> 1 <?xml version="1.0"?>
2 <tool id="hmmer_hmmfetch" name="hmmfetch" version="@TOOL_VERSION@"> 2 <tool id="hmmer_hmmfetch" name="hmmfetch" version="@TOOL_VERSION@+galaxy0" profile="@PROFILE@">
3 <description>retrieve profile HMM(s) from a file</description> 3 <description>retrieve profile HMM(s) from a file</description>
4 <macros> 4 <macros>
5 <import>macros.xml</import> 5 <import>macros.xml</import>
6 </macros> 6 </macros>
7 <expand macro="bio_tools"/> 7 <expand macro="bio_tools"/>
8 <expand macro="requirements"/> 8 <expand macro="requirements"/>
9 <expand macro="stdio"/> 9 <command detect_errors="aggressive"><![CDATA[
10 <command><![CDATA[
11 hmmfetch -f '$hmmfile' '$keyfile' > '$output' 10 hmmfetch -f '$hmmfile' '$keyfile' > '$output'
12 ]]></command> 11 ]]></command>
13 <inputs> 12 <inputs>
14 <!-- TODO: implement auto-indexing --> 13 <!-- TODO: implement auto-indexing -->
15 <expand macro="input_hmm" /> 14 <expand macro="input_hmm" />