Mercurial > repos > iuc > hmmer_hmmscan
diff test-data/globins.pfamtblout @ 0:216b19e6c317 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hmmer3 commit 4261b86af790a3535c0b9a8122f92225f8f67b47
| author | iuc |
|---|---|
| date | Sat, 25 Jun 2016 15:06:16 -0400 |
| parents | |
| children | 01219a31c48e |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/globins.pfamtblout Sat Jun 25 15:06:16 2016 -0400 @@ -0,0 +1,25 @@ +# Sequence scores +# --------------- +# +# name bits E-value n exp bias description +# ------------------- ------ --------- --- ----- ----- --------------------- +sp|P02185|MYG_PHYCD 222.7 1.8e-70 1 1.0 3.2 Myoglobin OS=Physeter catodon GN=MB PE=1 SV=2 +sp|P02024|HBB_GORGO 217.2 9.2e-69 1 1.0 0.1 Hemoglobin subunit beta OS=Gorilla gorilla gorilla GN=HBB PE=1 SV=2 + +# Domain scores +# ------------- +# +# name bits E-value hit bias env-st env-en ali-st ali-en hmm-st hmm-en description +# ------------------- ------ --------- ----- ----- ------ ------ ------ ------ ------ ------ --------------------- +sp|P02185|MYG_PHYCD 222.6 2e-70 1 3.2 1 148 2 148 2 149 Myoglobin OS=Physeter catodon GN=MB PE=1 SV=2 +sp|P02024|HBB_GORGO 217.0 1e-68 1 0.1 2 147 2 147 1 149 Hemoglobin subunit beta OS=Gorilla gorilla gorilla GN=HBB PE=1 SV=2 +# +# Program: hmmsearch +# Version: 3.1b2 (February 2015) +# Pipeline mode: SEARCH +# Query file: /tmp/tmpJW6ntL/files/000/dataset_1.dat +# Target file: /tmp/tmpJW6ntL/files/000/dataset_2.dat +# Option settings: hmmsearch --tblout /tmp/tmpJW6ntL/files/000/dataset_4.dat --domtblout /tmp/tmpJW6ntL/files/000/dataset_5.dat --pfamtblout /tmp/tmpJW6ntL/files/000/dataset_6.dat --notextw -E 10.0 --domE 10.0 --F1 0.02 --F2 0.001 --F3 1e-05 --seed 4 --cpu 1 /tmp/tmpJW6ntL/files/000/dataset_1.dat /tmp/tmpJW6ntL/files/000/dataset_2.dat +# Current dir: /tmp/tmpJW6ntL/job_working_directory/000/3 +# Date: Sat Jun 25 19:27:08 2016 +# [ok]