Mercurial > repos > iuc > hmmer_hmmsearch
comparison hmmsearch.xml @ 2:4d2ba28f8c8c draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hmmer3 commit a1a31824fc24d5e652c263b998b7f2363cbd7610
author | iuc |
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date | Wed, 04 Apr 2018 14:00:41 -0400 |
parents | 1dde27bbdcba |
children | 284d40d6f5a1 |
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1:e779d71f871a | 2:4d2ba28f8c8c |
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33 <expand macro="seed"/> | 33 <expand macro="seed"/> |
34 </inputs> | 34 </inputs> |
35 <outputs> | 35 <outputs> |
36 <data format="txt" name="output" label="HMM matches of $hmmfile.name in $seqdb.name"/> | 36 <data format="txt" name="output" label="HMM matches of $hmmfile.name in $seqdb.name"/> |
37 <data format="txt" name="tblout" label="Table of per-sequence hits from HMM matches of $hmmfile.name in $seqdb.name"> | 37 <data format="txt" name="tblout" label="Table of per-sequence hits from HMM matches of $hmmfile.name in $seqdb.name"> |
38 <filter>'tblout' in str(oformat)</filter> | 38 <filter>oformat and 'tblout' in oformat</filter> |
39 </data> | 39 </data> |
40 <data format="txt" name="domtblout" label="Table of per-domain hits from HMM matches of $hmmfile.name in $seqdb.name"> | 40 <data format="txt" name="domtblout" label="Table of per-domain hits from HMM matches of $hmmfile.name in $seqdb.name"> |
41 <filter>'domtblout' in str(oformat)</filter> | 41 <filter>oformat and 'domtblout' in oformat</filter> |
42 </data> | 42 </data> |
43 <data format="txt" name="pfamtblout" label="Table of per-sequence/per-domain hits from HMM matches of $hmmfile.name in $seqdb.name"> | 43 <data format="txt" name="pfamtblout" label="Table of per-sequence/per-domain hits from HMM matches of $hmmfile.name in $seqdb.name"> |
44 <filter>'pfamtblout' in str(oformat)</filter> | 44 <filter>oformat and 'pfamtblout' in oformat</filter> |
45 </data> | 45 </data> |
46 </outputs> | 46 </outputs> |
47 <tests> | 47 <tests> |
48 <test> | 48 <test> |
49 <param name="hmmfile" value="globins4.hmm"/> | 49 <param name="hmmfile" value="globins4.hmm"/> |