hmmer_jackhmmer: test-data/MADE1.out.tblout annotate

annotate test-data/MADE1.out.tblout @ 8:5cbef50c0c63 draft

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hmmer3 commit 061757dd7b3bfe66b7738fd54bd6c5e135d9afe8

author	iuc
date	Mon, 06 Nov 2023 20:26:42 +0000
parents	6e27bb3f0fa6
children

rev	line source
7 6e27bb3f0fa6 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hmmer3 commit 0bccf5220ed6549db7e053f85bbe917326b0a0be" iuc parents: 5 diff changeset	1 # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ----
6e27bb3f0fa6 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hmmer3 commit 0bccf5220ed6549db7e053f85bbe917326b0a0be" iuc parents: 5 diff changeset	2 # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target
6e27bb3f0fa6 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hmmer3 commit 0bccf5220ed6549db7e053f85bbe917326b0a0be" iuc parents: 5 diff changeset	3 #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- ---------------------
0 b23fd24e45a3 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hmmer3 commit 4261b86af790a3535c0b9a8122f92225f8f67b47 iuc parents: diff changeset	4 #
b23fd24e45a3 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hmmer3 commit 4261b86af790a3535c0b9a8122f92225f8f67b47 iuc parents: diff changeset	5 # Program: hmmscan
7 6e27bb3f0fa6 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hmmer3 commit 0bccf5220ed6549db7e053f85bbe917326b0a0be" iuc parents: 5 diff changeset	6 # Version: 3.3.2 (Nov 2020)
0 b23fd24e45a3 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hmmer3 commit 4261b86af790a3535c0b9a8122f92225f8f67b47 iuc parents: diff changeset	7 # Pipeline mode: SCAN
7 6e27bb3f0fa6 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hmmer3 commit 0bccf5220ed6549db7e053f85bbe917326b0a0be" iuc parents: 5 diff changeset	8 # Query file: /tmp/tmpgjabmh94/files/d/c/f/dataset_dcfa47ad-e0da-4c8c-a808-c5bbd7eb2eda.dat
4 793967b6ae8a planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hmmer3 commit 7c3ac4ad5a64b737e1b8f73c522e006097596f1d iuc parents: 0 diff changeset	9 # Target file: localref.hmm
7 6e27bb3f0fa6 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hmmer3 commit 0bccf5220ed6549db7e053f85bbe917326b0a0be" iuc parents: 5 diff changeset	10 # Option settings: hmmscan --tblout /tmp/tmpgjabmh94/files/9/8/3/dataset_9834554f-8f1e-4161-9c16-f4bd5042207c.dat --domtblout /tmp/tmpgjabmh94/files/8/e/b/dataset_8ebf81cb-d0c9-41a3-a725-c9e2f0d65d82.dat --pfamtblout /tmp/tmpgjabmh94/files/1/f/0/dataset_1f08bd39-0984-447e-b71e-7bf3442d708d.dat --notextw -E 10.0 --domE 10.0 --F1 0.02 --F2 0.001 --F3 1e-05 --seed 4 --cpu 0 localref.hmm /tmp/tmpgjabmh94/files/d/c/f/dataset_dcfa47ad-e0da-4c8c-a808-c5bbd7eb2eda.dat
6e27bb3f0fa6 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hmmer3 commit 0bccf5220ed6549db7e053f85bbe917326b0a0be" iuc parents: 5 diff changeset	11 # Current dir: /tmp/tmpgjabmh94/job_working_directory/000/3/working
6e27bb3f0fa6 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hmmer3 commit 0bccf5220ed6549db7e053f85bbe917326b0a0be" iuc parents: 5 diff changeset	12 # Date: Fri Jul 16 11:01:18 2021
0 b23fd24e45a3 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hmmer3 commit 4261b86af790a3535c0b9a8122f92225f8f67b47 iuc parents: diff changeset	13 # [ok]