Mercurial > repos > iuc > hmmer_jackhmmer

comparison test-data/nhmmer.out.tblout @ 7:6e27bb3f0fa6 draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hmmer3 commit 0bccf5220ed6549db7e053f85bbe917326b0a0be"
author iuc
date Wed, 21 Jul 2021 14:16:41 +0000
parents 5113c71c7031
children
comparison
equal deleted inserted replaced
6:d9ce554da9b4 7:6e27bb3f0fa6
5 humanchr1/239220001-239550000 - MADE1 DF0000629.2 1 78 302466 302389 302466 302387 330000 - 6.3e-08 31.0 6.7 - 5 humanchr1/239220001-239550000 - MADE1 DF0000629.2 1 78 302466 302389 302466 302387 330000 - 6.3e-08 31.0 6.7 -
6 humanchr1/239220001-239550000 - MADE1 DF0000629.2 43 80 174493 174456 174513 174456 330000 - 4.9e-06 25.0 7.0 - 6 humanchr1/239220001-239550000 - MADE1 DF0000629.2 43 80 174493 174456 174513 174456 330000 - 4.9e-06 25.0 7.0 -
7 humanchr1/239220001-239550000 - MADE1 DF0000629.2 41 71 304073 304103 304053 304109 330000 + 2.2 6.9 7.2 - 7 humanchr1/239220001-239550000 - MADE1 DF0000629.2 41 71 304073 304103 304053 304109 330000 + 2.2 6.9 7.2 -
8 # 8 #
9 # Program: nhmmer 9 # Program: nhmmer
10 # Version: 3.3 (Nov 2019) 10 # Version: 3.3.2 (Nov 2020)
11 # Pipeline mode: SEARCH 11 # Pipeline mode: SEARCH
12 # Query file: /tmp/tmpqydies2m/files/c/4/e/dataset_c4e67f40-cb86-438e-8bc0-6020ada9fc86.dat 12 # Query file: /tmp/tmpzdnl83p_/files/8/6/7/dataset_867699d1-2c6c-4367-8540-aa72655041fb.dat
13 # Target file: /tmp/tmpqydies2m/files/a/1/b/dataset_a1b4364c-0e9a-4709-b4ef-ab7e5661d9e9.dat 13 # Target file: /tmp/tmpzdnl83p_/files/1/a/1/dataset_1a1fb3d8-05ff-474e-b627-c162ff1aa7a5.dat
14 # Option settings: nhmmer --tblout /tmp/tmpqydies2m/files/b/d/d/dataset_bdd87d82-1ce1-4051-8d5f-f7251bf7fd18.dat --dfamtblout /tmp/tmpqydies2m/files/d/8/e/dataset_d8ee0d50-d171-4e8a-9c7d-1cbd4394296f.dat --aliscoresout /tmp/tmpqydies2m/files/5/1/3/dataset_5139892f-c507-40c4-b43d-f73023c634f4.dat --notextw -E 10.0 --F1 0.02 --F2 0.001 --F3 1e-05 --dna --seed 4 --cpu 1 /tmp/tmpqydies2m/files/c/4/e/dataset_c4e67f40-cb86-438e-8bc0-6020ada9fc86.dat /tmp/tmpqydies2m/files/a/1/b/dataset_a1b4364c-0e9a-4709-b4ef-ab7e5661d9e9.dat 14 # Option settings: nhmmer --tblout /tmp/tmpzdnl83p_/files/0/a/c/dataset_0ac8367e-7ecc-41a5-a995-09d458438754.dat --dfamtblout /tmp/tmpzdnl83p_/files/d/6/0/dataset_d60239d4-a95a-45fb-9b76-7ccedc277d9e.dat --aliscoresout /tmp/tmpzdnl83p_/files/f/6/e/dataset_f6e4f662-4b72-4e7a-9f18-de39b61bce27.dat --notextw -E 10.0 --F1 0.02 --F2 0.001 --F3 1e-05 --dna --seed 4 --cpu 0 /tmp/tmpzdnl83p_/files/8/6/7/dataset_867699d1-2c6c-4367-8540-aa72655041fb.dat /tmp/tmpzdnl83p_/files/1/a/1/dataset_1a1fb3d8-05ff-474e-b627-c162ff1aa7a5.dat
15 # Current dir: /tmp/tmpqydies2m/job_working_directory/000/17/working 15 # Current dir: /tmp/tmpzdnl83p_/job_working_directory/000/36/working
16 # Date: Thu May 14 18:54:51 2020 16 # Date: Fri Jul 16 10:34:18 2021
17 # [ok] 17 # [ok]