diff test-data/cut_ga_test.out @ 8:5cbef50c0c63 draft

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hmmer3 commit 061757dd7b3bfe66b7738fd54bd6c5e135d9afe8

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+++ b/test-data/cut_ga_test.out	Mon Nov 06 20:26:42 2023 +0000
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+# hmmsearch :: search profile(s) against a sequence database
+# HMMER 3.3.2 (Nov 2020); http://hmmer.org/
+# Copyright (C) 2020 Howard Hughes Medical Institute.
+# Freely distributed under the BSD open source license.
+# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
+# query HMM file:                  /tmp/saskia/tmpug0qcpsy/files/9/9/b/dataset_99bcd3c6-6d16-4e09-9878-7117f928bb24.dat
+# target sequence database:        /tmp/saskia/tmpug0qcpsy/files/f/9/9/dataset_f99d0a82-fcb5-4323-b2d4-8b218045c72e.dat
+# max ASCII text line length:      unlimited
+# model-specific thresholding:     GA cutoffs
+# Vit filter P threshold:       <= 0.001
+# Fwd filter P threshold:       <= 1e-05
+# random number seed set to:       4
+# number of worker threads:        0
+# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
+
+Query:       fn3  [M=86]
+Accession:   PF00041.13
+Description: Fibronectin type III domain
+Scores for complete sequences (score includes all domains):
+   --- full sequence ---   --- best 1 domain ---    -#dom-
+    E-value  score  bias    E-value  score  bias    exp  N  Sequence Description
+    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
+
+   [No hits detected that satisfy reporting thresholds]
+
+
+Domain annotation for each sequence (and alignments):
+
+   [No targets detected that satisfy reporting thresholds]
+
+
+Internal pipeline statistics summary:
+-------------------------------------
+Query model(s):                            1  (86 nodes)
+Target sequences:                          2  (301 residues searched)
+Passed MSV filter:                         0  (0); expected 0.0 (0.02)
+Passed bias filter:                        0  (0); expected 0.0 (0.02)
+Passed Vit filter:                         0  (0); expected 0.0 (0.001)
+Passed Fwd filter:                         0  (0); expected 0.0 (1e-05)
+Initial search space (Z):                  2  [actual number of targets]
+Domain search space  (domZ):               0  [number of targets reported over threshold]
+# CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.00
+# Mc/sec: 144.45
+//
+[ok]