Mercurial > repos > iuc > hmmer_jackhmmer
view test-data/jackhmmer.tblout @ 4:793967b6ae8a draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hmmer3 commit 7c3ac4ad5a64b737e1b8f73c522e006097596f1d
| author | iuc |
|---|---|
| date | Mon, 11 Jun 2018 15:51:14 -0400 |
| parents | b23fd24e45a3 |
| children | 5113c71c7031 |
line wrap: on
line source
# --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- HBB_MANSP - sp|P02185|MYG_PHYCD - 1.5e-69 224.0 0.1 1.7e-69 223.9 0.1 1.0 1 0 0 1 1 1 1 - HBB_URSMA - sp|P02185|MYG_PHYCD - 4.6e-69 222.5 0.2 5e-69 222.3 0.2 1.0 1 0 0 1 1 1 1 - HBB_RABIT - sp|P02185|MYG_PHYCD - 2.5e-68 220.1 0.6 2.7e-68 220.0 0.6 1.0 1 0 0 1 1 1 1 - HBB_SUNMU - sp|P02185|MYG_PHYCD - 7.6e-68 218.5 0.0 8.3e-68 218.4 0.0 1.0 1 0 0 1 1 1 1 - HBB_COLLI - sp|P02185|MYG_PHYCD - 9.5e-68 218.2 0.0 1.1e-67 217.9 0.0 1.0 1 0 0 1 1 1 1 - HBB_EQUHE - sp|P02185|MYG_PHYCD - 1.4e-67 217.6 0.1 1.6e-67 217.5 0.1 1.0 1 0 0 1 1 1 1 - HBB_TACAC - sp|P02185|MYG_PHYCD - 1.5e-67 217.6 0.3 1.6e-67 217.4 0.3 1.0 1 0 0 1 1 1 1 - HBB_SPECI - sp|P02185|MYG_PHYCD - 3.3e-67 216.5 0.7 3.6e-67 216.3 0.7 1.0 1 0 0 1 1 1 1 - HBB_CALAR - sp|P02185|MYG_PHYCD - 3.4e-67 216.4 0.1 3.8e-67 216.3 0.1 1.0 1 0 0 1 1 1 1 - HBB_SPETO - sp|P02185|MYG_PHYCD - 3.7e-67 216.3 0.4 4.1e-67 216.1 0.4 1.0 1 0 0 1 1 1 1 - HBB_ORNAN - sp|P02185|MYG_PHYCD - 6.6e-67 215.5 0.0 7.2e-67 215.3 0.0 1.0 1 0 0 1 1 1 1 - HBE_PONPY - sp|P02185|MYG_PHYCD - 8.4e-67 215.1 0.3 9.2e-67 215.0 0.3 1.0 1 0 0 1 1 1 1 - MYG_ESCGI - sp|P02185|MYG_PHYCD - 2.3e-66 213.7 1.7 2.6e-66 213.5 1.7 1.0 1 0 0 1 1 1 1 - HBB_TRIIN - sp|P02185|MYG_PHYCD - 2.9e-66 213.4 0.1 3.2e-66 213.2 0.1 1.0 1 0 0 1 1 1 1 - HBB_LARRI - sp|P02185|MYG_PHYCD - 5.3e-66 212.5 0.0 6.4e-66 212.3 0.0 1.0 1 0 0 1 1 1 1 - MYG_LYCPI - sp|P02185|MYG_PHYCD - 8.7e-66 211.8 1.6 9.6e-66 211.7 1.6 1.0 1 0 0 1 1 1 1 - MYG_PROGU - sp|P02185|MYG_PHYCD - 1.8e-65 210.8 0.2 2e-65 210.6 0.2 1.0 1 0 0 1 1 1 1 - MYG_SAISC - sp|P02185|MYG_PHYCD - 2.5e-65 210.3 0.9 2.8e-65 210.2 0.9 1.0 1 0 0 1 1 1 1 - MYG_HORSE - sp|P02185|MYG_PHYCD - 2.6e-65 210.3 0.8 2.9e-65 210.1 0.8 1.0 1 0 0 1 1 1 1 - HBA_MESAU - sp|P02185|MYG_PHYCD - 9.1e-65 208.5 0.2 1e-64 208.4 0.2 1.0 1 0 0 1 1 1 1 - MYG_MOUSE - sp|P02185|MYG_PHYCD - 1.3e-64 208.0 0.3 1.4e-64 207.9 0.3 1.0 1 0 0 1 1 1 1 - HBB_TUPGL - sp|P02185|MYG_PHYCD - 1.5e-64 207.8 0.0 1.7e-64 207.6 0.0 1.0 1 0 0 1 1 1 1 - HBA_PONPY - sp|P02185|MYG_PHYCD - 1.3e-63 204.7 0.5 1.5e-63 204.6 0.5 1.0 1 0 0 1 1 1 1 - HBA_MACFA - sp|P02185|MYG_PHYCD - 2.9e-63 203.6 0.2 3.2e-63 203.5 0.2 1.0 1 0 0 1 1 1 1 - HBA_MACSI - sp|P02185|MYG_PHYCD - 4e-63 203.2 0.2 4.4e-63 203.0 0.2 1.0 1 0 0 1 1 1 1 - HBB1_VAREX - sp|P02185|MYG_PHYCD - 5e-63 202.9 0.1 5.9e-63 202.6 0.1 1.0 1 0 0 1 1 1 1 - HBA_AILME - sp|P02185|MYG_PHYCD - 5.7e-63 202.7 0.1 6.4e-63 202.5 0.1 1.0 1 0 0 1 1 1 1 - HBA2_BOSMU - sp|P02185|MYG_PHYCD - 8.6e-63 202.1 0.3 9.6e-63 201.9 0.3 1.0 1 0 0 1 1 1 1 - HBA_FRAPO - sp|P02185|MYG_PHYCD - 1.8e-62 201.0 0.3 2e-62 200.9 0.3 1.0 1 0 0 1 1 1 1 - HBA2_GALCR - sp|P02185|MYG_PHYCD - 1.9e-62 201.0 0.4 2.1e-62 200.8 0.4 1.0 1 0 0 1 1 1 1 - HBA_PHACO - sp|P02185|MYG_PHYCD - 2.1e-62 200.8 0.3 2.4e-62 200.7 0.3 1.0 1 0 0 1 1 1 1 - HBA_ANSSE - sp|P02185|MYG_PHYCD - 4e-62 199.9 0.3 4.4e-62 199.8 0.3 1.0 1 0 0 1 1 1 1 - HBA_ERIEU - sp|P02185|MYG_PHYCD - 4e-62 199.9 0.1 4.5e-62 199.8 0.1 1.0 1 0 0 1 1 1 1 - HBA_PAGLA - sp|P02185|MYG_PHYCD - 8.3e-62 198.9 0.3 9.2e-62 198.8 0.3 1.0 1 0 0 1 1 1 1 - HBA_PROLO - sp|P02185|MYG_PHYCD - 9.5e-62 198.7 0.0 1.1e-61 198.6 0.0 1.0 1 0 0 1 1 1 1 - HBA_TRIOC - sp|P02185|MYG_PHYCD - 2.2e-61 197.5 0.4 2.4e-61 197.4 0.4 1.0 1 0 0 1 1 1 1 - HBAD_CHLME - sp|P02185|MYG_PHYCD - 1.2e-60 195.1 0.5 1.3e-60 195.0 0.5 1.0 1 0 0 1 1 1 1 - HBAZ_HORSE - sp|P02185|MYG_PHYCD - 4.1e-60 193.4 0.1 4.5e-60 193.3 0.1 1.0 1 0 0 1 1 1 1 - HBA_COLLI - sp|P02185|MYG_PHYCD - 6e-60 192.9 0.2 6.7e-60 192.7 0.2 1.0 1 0 0 1 1 1 1 - HBBL_RANCA - sp|P02185|MYG_PHYCD - 1.7e-59 191.4 0.2 2e-59 191.2 0.2 1.0 1 0 0 1 1 1 1 - HBAD_PASMO - sp|P02185|MYG_PHYCD - 2.2e-59 191.0 0.1 2.4e-59 190.9 0.1 1.0 1 0 0 1 1 1 1 - HBB2_XENTR - sp|P02185|MYG_PHYCD - 1.1e-58 188.8 0.6 1.3e-58 188.6 0.6 1.0 1 0 0 1 1 1 1 - HBA4_SALIR - sp|P02185|MYG_PHYCD - 5.3e-56 180.0 0.1 5.9e-56 179.9 0.1 1.0 1 0 0 1 1 1 1 - MYG_MUSAN - sp|P02185|MYG_PHYCD - 2.5e-54 174.6 0.4 2.8e-54 174.5 0.4 1.0 1 0 0 1 1 1 1 - HBB2_TRICR - sp|P02185|MYG_PHYCD - 2e-52 168.4 0.0 2.2e-52 168.3 0.0 1.0 1 0 0 1 1 1 1 - HBB_MANSP - sp|P02024|HBB_GORGO - 3.6e-74 238.9 0.1 4e-74 238.8 0.1 1.0 1 0 0 1 1 1 1 - HBB_URSMA - sp|P02024|HBB_GORGO - 1.7e-73 236.7 0.3 1.9e-73 236.6 0.3 1.0 1 0 0 1 1 1 1 - HBB_RABIT - sp|P02024|HBB_GORGO - 2.2e-72 233.1 0.8 2.4e-72 233.0 0.8 1.0 1 0 0 1 1 1 1 - HBB_SUNMU - sp|P02024|HBB_GORGO - 5.4e-72 231.8 0.1 6e-72 231.7 0.1 1.0 1 0 0 1 1 1 1 - HBB_CALAR - sp|P02024|HBB_GORGO - 7e-72 231.5 0.2 7.7e-72 231.3 0.2 1.0 1 0 0 1 1 1 1 - HBB_COLLI - sp|P02024|HBB_GORGO - 9.6e-72 231.0 0.0 1.1e-71 230.9 0.0 1.0 1 0 0 1 1 1 1 - HBB_TACAC - sp|P02024|HBB_GORGO - 2.5e-71 229.7 0.4 2.8e-71 229.6 0.4 1.0 1 0 0 1 1 1 1 - HBE_PONPY - sp|P02024|HBB_GORGO - 4.8e-71 228.8 0.4 5.3e-71 228.6 0.4 1.0 1 0 0 1 1 1 1 - HBB_EQUHE - sp|P02024|HBB_GORGO - 5.1e-71 228.7 0.2 5.7e-71 228.5 0.2 1.0 1 0 0 1 1 1 1 - HBB_SPECI - sp|P02024|HBB_GORGO - 1.3e-70 227.3 1.0 1.5e-70 227.2 1.0 1.0 1 0 0 1 1 1 1 - HBB_SPETO - sp|P02024|HBB_GORGO - 2e-70 226.8 0.6 2.2e-70 226.6 0.6 1.0 1 0 0 1 1 1 1 - HBB_TRIIN - sp|P02024|HBB_GORGO - 3.7e-70 225.9 0.1 4.1e-70 225.8 0.1 1.0 1 0 0 1 1 1 1 - HBB_ORNAN - sp|P02024|HBB_GORGO - 4.1e-70 225.7 0.0 4.6e-70 225.6 0.0 1.0 1 0 0 1 1 1 1 - HBB_LARRI - sp|P02024|HBB_GORGO - 5.7e-70 225.3 0.0 6.4e-70 225.1 0.0 1.0 1 0 0 1 1 1 1 - HBB_TUPGL - sp|P02024|HBB_GORGO - 1.8e-68 220.5 0.0 1.9e-68 220.3 0.0 1.0 1 0 0 1 1 1 1 - HBB1_VAREX - sp|P02024|HBB_GORGO - 1.5e-67 217.4 0.1 1.7e-67 217.3 0.1 1.0 1 0 0 1 1 1 1 - HBBL_RANCA - sp|P02024|HBB_GORGO - 7.8e-64 205.4 0.3 8.7e-64 205.2 0.3 1.0 1 0 0 1 1 1 1 - HBA_MESAU - sp|P02024|HBB_GORGO - 4.5e-63 202.9 0.3 5e-63 202.8 0.3 1.0 1 0 0 1 1 1 1 - HBB2_XENTR - sp|P02024|HBB_GORGO - 2e-62 200.8 0.8 2.3e-62 200.6 0.8 1.0 1 0 0 1 1 1 1 - HBA_PONPY - sp|P02024|HBB_GORGO - 4.6e-62 199.6 0.7 5e-62 199.5 0.7 1.0 1 0 0 1 1 1 1 - HBA_MACFA - sp|P02024|HBB_GORGO - 8.7e-62 198.7 0.3 9.6e-62 198.6 0.3 1.0 1 0 0 1 1 1 1 - HBA_MACSI - sp|P02024|HBB_GORGO - 1.3e-61 198.2 0.3 1.4e-61 198.1 0.3 1.0 1 0 0 1 1 1 1 - HBA_AILME - sp|P02024|HBB_GORGO - 2.1e-61 197.5 0.1 2.4e-61 197.3 0.1 1.0 1 0 0 1 1 1 1 - HBA2_GALCR - sp|P02024|HBB_GORGO - 6.6e-61 195.9 0.6 7.3e-61 195.7 0.6 1.0 1 0 0 1 1 1 1 - HBA_FRAPO - sp|P02024|HBB_GORGO - 7.1e-61 195.8 0.4 7.8e-61 195.7 0.4 1.0 1 0 0 1 1 1 1 - HBA_PHACO - sp|P02024|HBB_GORGO - 7.3e-61 195.7 0.4 8e-61 195.6 0.4 1.0 1 0 0 1 1 1 1 - HBA2_BOSMU - sp|P02024|HBB_GORGO - 7.6e-61 195.7 0.4 8.3e-61 195.6 0.4 1.0 1 0 0 1 1 1 1 - HBA_ERIEU - sp|P02024|HBB_GORGO - 2.4e-60 194.0 0.1 2.7e-60 193.9 0.1 1.0 1 0 0 1 1 1 1 - HBA_PROLO - sp|P02024|HBB_GORGO - 3.3e-60 193.6 0.0 3.6e-60 193.5 0.0 1.0 1 0 0 1 1 1 1 - HBA_ANSSE - sp|P02024|HBB_GORGO - 3.9e-60 193.4 0.4 4.3e-60 193.2 0.4 1.0 1 0 0 1 1 1 1 - HBA_PAGLA - sp|P02024|HBB_GORGO - 4.1e-60 193.3 0.5 4.5e-60 193.2 0.5 1.0 1 0 0 1 1 1 1 - HBA_TRIOC - sp|P02024|HBB_GORGO - 2.7e-59 190.7 0.5 2.9e-59 190.5 0.5 1.0 1 0 0 1 1 1 1 - HBAD_CHLME - sp|P02024|HBB_GORGO - 6.3e-59 189.4 0.5 7e-59 189.3 0.5 1.0 1 0 0 1 1 1 1 - HBAZ_HORSE - sp|P02024|HBB_GORGO - 7.5e-59 189.2 0.1 8.2e-59 189.1 0.1 1.0 1 0 0 1 1 1 1 - HBA_COLLI - sp|P02024|HBB_GORGO - 1.6e-58 188.1 0.2 1.8e-58 188.0 0.2 1.0 1 0 0 1 1 1 1 - HBAD_PASMO - sp|P02024|HBB_GORGO - 2e-58 187.8 0.1 2.2e-58 187.7 0.1 1.0 1 0 0 1 1 1 1 - MYG_SAISC - sp|P02024|HBB_GORGO - 2.9e-57 184.1 1.0 3.2e-57 183.9 1.0 1.0 1 0 0 1 1 1 1 - MYG_LYCPI - sp|P02024|HBB_GORGO - 3e-57 184.0 1.9 3.3e-57 183.9 1.9 1.0 1 0 0 1 1 1 1 - MYG_PROGU - sp|P02024|HBB_GORGO - 8.3e-57 182.6 0.2 9.2e-57 182.4 0.2 1.0 1 0 0 1 1 1 1 - MYG_ESCGI - sp|P02024|HBB_GORGO - 8.8e-57 182.5 2.3 9.7e-57 182.4 2.3 1.0 1 0 0 1 1 1 1 - MYG_HORSE - sp|P02024|HBB_GORGO - 2.5e-56 181.0 1.0 2.7e-56 180.9 1.0 1.0 1 0 0 1 1 1 1 - MYG_MOUSE - sp|P02024|HBB_GORGO - 4.7e-56 180.1 0.3 5.2e-56 180.0 0.3 1.0 1 0 0 1 1 1 1 - HBA4_SALIR - sp|P02024|HBB_GORGO - 7.5e-56 179.5 0.1 8.3e-56 179.3 0.1 1.0 1 0 0 1 1 1 1 - HBB2_TRICR - sp|P02024|HBB_GORGO - 2.7e-55 177.7 0.0 3e-55 177.5 0.0 1.0 1 0 0 1 1 1 1 - MYG_MUSAN - sp|P02024|HBB_GORGO - 4.6e-45 144.5 0.3 5.1e-45 144.3 0.3 1.0 1 0 0 1 1 1 1 - # # Program: jackhmmer # Version: 3.2 (June 2018) # Pipeline mode: SEARCH # Query file: /tmp/tmpw5_nj0/files/000/dataset_1.dat # Target file: /tmp/tmpw5_nj0/files/000/dataset_2.dat # Option settings: jackhmmer -N 5 --tblout /tmp/tmpw5_nj0/files/000/dataset_4.dat --domtblout /tmp/tmpw5_nj0/files/000/dataset_5.dat --notextw -E 10.0 --domE 10.0 --F1 0.02 --F2 0.001 --F3 1e-05 --wpb --EmL 200 --EmN 200 --EvL 200 --EvN 200 --EfL 100 --EfN 200 --Eft 0.04 --seed 4 --cpu 1 /tmp/tmpw5_nj0/files/000/dataset_1.dat /tmp/tmpw5_nj0/files/000/dataset_2.dat # Current dir: /tmp/tmpw5_nj0/job_working_directory/000/3/working # Date: Mon Jun 11 17:59:06 2018 # [ok]