Mercurial > repos > iuc > hmmer_nhmmer
diff test-data/MADE1.out.tblout @ 7:b28e8ed99424 draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hmmer3 commit 0bccf5220ed6549db7e053f85bbe917326b0a0be"
| author | iuc |
|---|---|
| date | Wed, 21 Jul 2021 14:11:12 +0000 |
| parents | b4fe2f703b4b |
| children |
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--- a/test-data/MADE1.out.tblout Thu Jan 14 15:42:52 2021 +0000 +++ b/test-data/MADE1.out.tblout Wed Jul 21 14:11:12 2021 +0000 @@ -1,14 +1,13 @@ -# --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- -# target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target -#------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- -MADE1 DF0000629.2 humanchr1/239220001-239550000 - 9.3e-18 51.2 26.3 1.3e-12 34.8 0.7 8.6 4 0 0 4 4 4 2 MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon +# --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- +# target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target +#------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- # # Program: hmmscan -# Version: 3.3 (Nov 2019) +# Version: 3.3.2 (Nov 2020) # Pipeline mode: SCAN -# Query file: /tmp/tmpqydies2m/files/5/d/3/dataset_5d34ccc7-9920-470e-9f13-678ab2ecd29d.dat +# Query file: /tmp/tmpgjabmh94/files/d/c/f/dataset_dcfa47ad-e0da-4c8c-a808-c5bbd7eb2eda.dat # Target file: localref.hmm -# Option settings: hmmscan --tblout /tmp/tmpqydies2m/files/1/d/a/dataset_1da10e33-3e1c-48fc-abfb-7e3c263ec0df.dat --domtblout /tmp/tmpqydies2m/files/7/2/3/dataset_723f3cf1-e0de-4616-aec7-dd16680f3be3.dat --pfamtblout /tmp/tmpqydies2m/files/7/3/4/dataset_734c7f25-0a22-431b-9a7a-58849fcd6009.dat --notextw -E 10.0 --domE 10.0 --F1 0.02 --F2 0.001 --F3 1e-05 --seed 4 --cpu 1 localref.hmm /tmp/tmpqydies2m/files/5/d/3/dataset_5d34ccc7-9920-470e-9f13-678ab2ecd29d.dat -# Current dir: /tmp/tmpqydies2m/job_working_directory/000/8/working -# Date: Thu May 14 18:53:22 2020 +# Option settings: hmmscan --tblout /tmp/tmpgjabmh94/files/9/8/3/dataset_9834554f-8f1e-4161-9c16-f4bd5042207c.dat --domtblout /tmp/tmpgjabmh94/files/8/e/b/dataset_8ebf81cb-d0c9-41a3-a725-c9e2f0d65d82.dat --pfamtblout /tmp/tmpgjabmh94/files/1/f/0/dataset_1f08bd39-0984-447e-b71e-7bf3442d708d.dat --notextw -E 10.0 --domE 10.0 --F1 0.02 --F2 0.001 --F3 1e-05 --seed 4 --cpu 0 localref.hmm /tmp/tmpgjabmh94/files/d/c/f/dataset_dcfa47ad-e0da-4c8c-a808-c5bbd7eb2eda.dat +# Current dir: /tmp/tmpgjabmh94/job_working_directory/000/3/working +# Date: Fri Jul 16 11:01:18 2021 # [ok]