Information for 5-GATGATGC (Motif 8)

A C T G C G T A A C G T A C T G C G T A A C G T A C T G A G T C
Reverse Opposite:
A C T G A G T C C G T A A C G T A G T C C G T A A C G T A G T C
p-value:1e-1
log p-value:-2.889e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif223.5
Percentage of Background Sequences with motif5.58%
Average Position of motif in Targets117.0 +/- 0.0bp
Average Position of motif in Background93.3 +/- 78.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AGL42/MA1201.1/Jaspar

Match Rank:1
Score:0.90
Offset:0
Orientation:reverse strand
Alignment:GATGATGC
GATGATG-
A C T G C G T A A C G T A C T G C G T A A C G T A C T G A G T C
C T A G C G T A A C G T A C T G C T G A A C G T A C T G A C G T

RBM47(RRM)/Gallus_gallus-RNCMPT00279-PBM/HughesRNA

Match Rank:2
Score:0.83
Offset:0
Orientation:forward strand
Alignment:GATGATGC
GATGATN-
A C T G C G T A A C G T A C T G C G T A A C G T A C T G A G T C
A C T G C G T A A C G T A T C G C G T A C G A T C G A T A C G T

RIN(RRM)/Drosophila_melanogaster-RNCMPT00138-PBM/HughesRNA

Match Rank:3
Score:0.83
Offset:-1
Orientation:forward strand
Alignment:-GATGATGC
AGATGATG-
A C G T A C T G C G T A A C G T A C T G C G T A A C G T A C T G A G T C
C T G A C T A G C G T A A C G T A C T G C T G A G C A T C T A G A C G T

ZML2(C2C2gata)/col-ZML2-DAP-Seq(GSE60143)/Homer

Match Rank:4
Score:0.79
Offset:-3
Orientation:reverse strand
Alignment:---GATGATGC
GATGATGATG-
A C G T A C G T A C G T A C T G C G T A A C G T A C T G C G T A A C G T A C T G A G T C
C T A G C T G A C G A T T C A G C T G A C A G T A T C G C T G A C A G T A T C G A C G T

Rbm47(RRM)/Xenopus_tropicalis-RNCMPT00280-PBM/HughesRNA

Match Rank:5
Score:0.78
Offset:0
Orientation:forward strand
Alignment:GATGATGC
GATGATN-
A C T G C G T A A C G T A C T G C G T A A C G T A C T G A G T C
A C T G C G T A A C G T A T C G C G T A C G A T G A C T A C G T

RBP1-LIKE(RRM)/Drosophila_melanogaster-RNCMPT00127-PBM/HughesRNA

Match Rank:6
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-GATGATGC
CGTTGAT--
A C G T A C T G C G T A A C G T A C T G C G T A A C G T A C T G A G T C
A G T C A C T G G C A T A C G T A C T G C G T A A C G T A C G T A C G T

ATF4/MA0833.1/Jaspar

Match Rank:7
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-GATGATGC----
GGATGATGCAATA
A C G T A C T G C G T A A C G T A C T G C G T A A C G T A C T G A G T C A C G T A C G T A C G T A C G T
C T A G C A T G T G C A A C G T C T A G C G T A A G C T C A T G G A T C G T C A G C T A A G C T T G C A

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:8
Score:0.74
Offset:1
Orientation:forward strand
Alignment:GATGATGC---
-MTGATGCAAT
A C T G C G T A A C G T A C T G C G T A A C G T A C T G A G T C A C G T A C G T A C G T
A C G T T G C A A G C T C A T G C G T A A G C T A C T G G A T C G T C A C G T A A G C T

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:9
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:GATGATGC---
-ATGATGCAAT
A C T G C G T A A C G T A C T G C G T A A C G T A C T G A G T C A C G T A C G T A C G T
A C G T T G C A A G C T A C T G C G T A A G C T C A T G G A T C T G C A C G T A A G C T

AARE(HLH)/mES-cMyc-ChIP-Seq/Homer

Match Rank:10
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:GATGATGC----
--TGATGCAATC
A C T G C G T A A C G T A C T G C G T A A C G T A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T A C G C G T A A G C T A C T G G T A C C G T A G T C A A G C T G A T C