Homer de novo Motif Results (.//)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 15
Total background sequences = 68
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 * C G A T A C G T A C G T C G A T A G T C C G T A C G T A C G T A C G T A C G A T A G C T A T G C 1e-5-1.200e+0153.33%2.94%111.3bp (46.0bp)Unknown6/Drosophila-Promoters/Homer(0.818)
More Information | Similar Motifs Found		motif file (matrix)
2 * A C G T C G A T C G A T A G T C A C G T A C G T A C T G T C G A 1e-4-1.139e+0146.67%1.47%122.7bp (0.0bp)NAC078/MA1677.1/Jaspar(0.916)
More Information | Similar Motifs Found		motif file (matrix)
3 * C G T A A C G T A C G T A G C T A C T G A C G T A G T C C G T A A T G C C G T A 1e-3-9.177e+0033.33%0.00%121.8bp (0.0bp)PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer(0.746)
More Information | Similar Motifs Found		motif file (matrix)
4 * A C G T A C G T G A C T G T A C G A T C G T C A C T G A C G T A C T G A C G T A C G T A C G T A 1e-3-9.067e+0066.67%14.71%114.1bp (83.7bp)HuR(RRM)/Homo_sapiens-RNCMPT00274-PBM/HughesRNA(0.794)
More Information | Similar Motifs Found		motif file (matrix)
5 * C G A T A C G T A C T G C G T A G T C A A C G T C T G A C T A G C G T A C G A T 1e-3-8.883e+0046.67%4.41%69.4bp (85.9bp)PB0068.1_Sox1_1/Jaspar(0.716)
More Information | Similar Motifs Found		motif file (matrix)
6 * T A G C C G A T C T G A C G A T A C G T C A G T C T G A G T C A A C G T G T C A G T A C T G C A 1e-3-8.111e+0040.00%2.94%66.2bp (36.0bp)HDG1(Homeobox)/col100-HDG1-DAP-Seq(GSE60143)/Homer(0.716)
More Information | Similar Motifs Found		motif file (matrix)
7 * A C G T G T A C C G A T C G T A T A C G A C T G A G T C C G T A 1e-3-8.111e+0040.00%2.94%117.4bp (108.5bp)MOT3/MA0340.1/Jaspar(0.778)
More Information | Similar Motifs Found		motif file (matrix)
8 * G T C A G T A C C G T A G T C A C G T A C G T A A T G C A G T C A C G T C G A T 1e-3-7.498e+0033.33%1.47%78.4bp (0.0bp)Pp_0206(RRM)/Physcomitrella_patens-RNCMPT00206-PBM/HughesRNA(0.823)
More Information | Similar Motifs Found		motif file (matrix)
9 * G C T A A C G T C A T G G T A C C A T G A G T C C G A T G T A C 1e-3-7.368e+0060.00%14.71%82.6bp (111.5bp)ZC3H10(Znf)/Homo_sapiens-RNCMPT00085-PBM/HughesRNA(0.753)
More Information | Similar Motifs Found		motif file (matrix)
10 * C G T A C G T A C G T A G C T A G C T A G C T A A T G C C T G A T G C A G T C A C G T A C G T A 1e-3-7.120e+0040.00%4.41%82.9bp (107.9bp)RLR1?/SacCer-Promoters/Homer(0.799)
More Information | Similar Motifs Found		motif file (matrix)
11 * A C T G C T A G G T A C T C A G G T A C A G T C C G A T C T A G 1e-2-5.714e+0026.67%1.47%125.4bp (0.0bp)brk/dmmpmm(Papatsenko)/fly(0.807)
More Information | Similar Motifs Found		motif file (matrix)