Mercurial > repos > iuc > homer_findmotifsgenome

comparison test-data/demoDB/data/accession/worm.description @ 3:4fe92af4542b draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/homer commit 16a919905f336e34e237388c1921d0f4f8a368af
author iuc
date Thu, 06 Apr 2023 16:22:23 +0000
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comparison
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2:a8f207b43f64 3:4fe92af4542b
1 GeneID Unigene RefSeq Ensembl name alias orf chromosome description type
2 13206415 NR_064002 21ur-4655 - CELE_Y105C5A.437 - ncRNA ncRNA
3 13192190 NR_052929 Y77E11A.18 - CELE_Y77E11A.18 - ncRNA ncRNA
4 13205826 NR_063434 21ur-2817 - CELE_Y105C5A.430 - ncRNA ncRNA
5 13204810 NR_062450 21ur-833 - CELE_Y73F8A.138 - ncRNA ncRNA
6 13204564 NR_062214 21ur-7076 - CELE_Y73F8A.575 - ncRNA ncRNA
7 185688 Cel.18491 NM_060137 F42H11.1 - CELE_F42H11.1 - hypothetical protein protein-coding
8 13193193 NR_053268 21ur-14710 - CELE_T08B6.40 - ncRNA ncRNA
9 13207184 NR_064753 21ur-12409 - CELE_Y105C5B.845 - ncRNA ncRNA
10 3565853 Cel.29934 NM_001026043 C40H1.9 - CELE_C40H1.9 - hypothetical protein protein-coding
11 175579 Cel.10790 NM_065499 C28A5.6 - CELE_C28A5.6 - hypothetical protein protein-coding
12 13206434 NR_064019 21ur-9453 - CELE_Y105C5A.982 - ncRNA ncRNA
13 3896775 clec-69 - CELE_F56D6.15 - pseudo pseudo
14 188085 Cel.14467 NM_062428 T05A7.7 - CELE_T05A7.7 - hypothetical protein protein-coding
15 178946 NR_000460 CD4.10 - CELE_CD4.10 - ncRNA ncRNA
16 179411 Cel.39151 NM_001269256 C08B6.8 - CELE_C08B6.8 - Probable oligoribonuclease protein-coding
17 13206365 NR_063953 21ur-13842 - CELE_Y105C5A.724 - ncRNA ncRNA
18 13213220 NR_068896 F13H6.16 - CELE_F13H6.16 - ncRNA ncRNA
19 186367 Cel.845 NM_075857 F56C3.9 - CELE_F56C3.9 - Uncharacterized protein protein-coding
20 13209600 NR_067056 21ur-13635 - CELE_Y51H4A.677 - ncRNA ncRNA
21 13194638 NR_054502 21ur-4645 - CELE_H35B03.4 - ncRNA ncRNA
22 13204479 NR_062133 21ur-2192 - CELE_Y40H7A.54 - ncRNA ncRNA
23 13198459 NR_056762 21ur-13274 - CELE_M18.10 - ncRNA ncRNA
24 13191966 NR_052859 F29C4.10 - CELE_F29C4.10 - ncRNA ncRNA
25 13189564 NR_052313 D1044.13 - CELE_D1044.13 - ncRNA ncRNA
26 172598 Cel.4960 NM_059827 mau-2 - CELE_C09H6.3 - Maternal uncoordinated protein 2 protein-coding
27 13203659 NR_061358 21ur-14851 - CELE_Y41E3.446 - ncRNA ncRNA
28 180673 Cel.17944 NM_076270 F47F2.1 - CELE_F47F2.1 - cAMP-dependent protein kinase, catalytic subunit-like protein-coding
29 13224290 NR_072779 K09E9.11 - CELE_K09E9.11 - ncRNA ncRNA
30 13209673 NR_067125 21ur-7588 - CELE_Y51H4A.592 - ncRNA ncRNA
31 13206478 NR_064063 21ur-3061 - CELE_Y105C5A.100 - ncRNA ncRNA
32 13195162 NR_054986 21ur-6358 - CELE_K02B2.27 - ncRNA ncRNA
33 185825 F46A8.9 - CELE_F46A8.9 - pseudo pseudo
34 3565798 Cel.29917 NM_001027488 K04C2.7 - CELE_K04C2.7 - hypothetical protein protein-coding
35 24104712 NR_101537 anr-45 - CELE_K03E5.8 - ncRNA ncRNA
36 171853 Cel.18297 NM_058660 rpl-1 - CELE_Y71F9AL.13 - 60S ribosomal protein L10a;Ribosomal protein protein-coding
37 13193708 NR_053707 21ur-10684 - CELE_W03F8.39 - ncRNA ncRNA
38 266652 Cel.12614 NM_070191 mam-3 - CELE_K09B11.10 - MAM (Meprin, A5-protein, PTPmu) domain protein protein-coding
39 177485 Cel.11628 NM_068710 ZC477.2 - CELE_ZC477.2 - hypothetical protein protein-coding
40 174105 NM_062964 rpy-1 - CELE_C18H9.7 - 43 kDa receptor-associated protein of the synapse homolog protein-coding
41 13194942 NR_054788 21ur-4374 - CELE_C06E7.45 - ncRNA ncRNA
42 13193456 NR_053482 21ur-9776 - CELE_C09B9.55 - ncRNA ncRNA
43 185519 Cel.3982 NM_074947 srh-174 - CELE_F40D4.1 - Serpentine Receptor, class H protein-coding
44 13197724 NR_056512 K04D7.13 - CELE_K04D7.13 - ncRNA ncRNA
45 13190736 NR_052598 T23G5.11 - CELE_T23G5.11 - ncRNA ncRNA
46 13193728 NR_053722 21ur-7386 - CELE_W03F8.62 - ncRNA ncRNA
47 13202087 NR_059860 21ur-11012 - CELE_Y57G11B.142 - ncRNA ncRNA
48 173658 Cel.14131 NM_062049 clec-123 - CELE_Y25C1A.1 - C-type LECtin protein-coding
49 179137 NM_072537 C54F6.5 - CELE_C54F6.5 - hypothetical protein protein-coding
50 13207423 NR_064976 21ur-10260 - CELE_Y105C5B.891 - ncRNA ncRNA
51 179557 Cel.19449 NM_073455 mxl-1 - CELE_T19B10.11 - MaX-Like protein-coding
52 189331 Cel.28984 NM_058653 W10C8.3 - CELE_W10C8.3 - hypothetical protein protein-coding
53 179732 Cel.2017 NM_073761 lin-25 - CELE_F56H9.5 - Protein lin-25 protein-coding
54 13200806 NR_058631 21ur-15409 - CELE_F02H6.49 - ncRNA ncRNA
55 13217996 C47A10.t4 - CELE_C47A10.t4 - tRNA tRNA
56 13199284 NR_057197 21ur-14882 - CELE_F52D4.16 - ncRNA ncRNA
57 3896823 Cel.33071 NM_001038411 cnc-9 - CELE_R13D7.11 - CaeNaCin (Caenorhabditis bacteriocin) protein-coding
58 172133 Cel.8139 NM_059112 fhod-1 - CELE_C46H11.11 - Formin HOmology Domain protein-coding
59 188632 Cel.29141 NM_066228 T20B12.5 - CELE_T20B12.5 - hypothetical protein protein-coding
60 13194998 srv-23 - CELE_H04M03.10 - pseudo pseudo
61 13200004 NR_057881 21ur-7113 - CELE_C27H2.102 - ncRNA ncRNA
62 191464 Cel.13743 NM_064140 ZK930.4 - CELE_ZK930.4 - hypothetical protein protein-coding
63 174485 Cel.39094 NM_063595 C06C3.4 - CELE_C06C3.4 - hypothetical protein protein-coding
64 13186517 sra-5 - CELE_AH6.9 - pseudo pseudo
65 24104913 NM_001307295 T21D12.14 - CELE_T21D12.14 - hypothetical protein protein-coding
66 177948 Cel.12370 NM_069551 zim-2 - CELE_T07G12.10 - Zinc finger In Meiosis protein-coding
67 24104749 NR_101576 K10D3.10 - CELE_K10D3.10 - ncRNA ncRNA
68 13201278 NR_059084 21ur-9623 - CELE_Y67A10A.243 - ncRNA ncRNA
69 190555 Cel.98 NM_066238 Y69F12A.1 - CELE_Y69F12A.1 - hypothetical protein protein-coding
70 13224709 NR_072940 T08G2.6 - CELE_T08G2.6 - ncRNA ncRNA
71 13200468 NR_058324 21ur-2521 - CELE_F52B11.27 - ncRNA ncRNA
72 187147 NM_001318264 K08D9.4 - CELE_K08D9.4 - hypothetical protein protein-coding
73 179509 Cel.3784 NM_073375 F32D8.5 - CELE_F32D8.5 - hypothetical protein protein-coding
74 172774 Cel.29728 NM_060113 calm-1 - CELE_F30A10.1 - CALMyrin (Calcium and Integrin Binding protein) homolog protein-coding
75 13199751 NR_057638 21ur-3538 - CELE_B0513.32 - ncRNA ncRNA
76 13204783 NR_062428 21ur-232 - CELE_Y73F8A.211 - ncRNA ncRNA
77 176400 Cel.18047 NM_066790 alg-4 - CELE_ZK757.3 - Putative protein tag-76 protein-coding
78 13214270 NR_069154 T27E4.12 CELE_T27E4.22|T27E4.22 CELE_T27E4.12 - ncRNA ncRNA
79 7040179 Cel.37810 NM_001136302 F49B2.7 - CELE_F49B2.7 - hypothetical protein protein-coding
80 3565973 Cel.30300 NM_001029452 sssh-1 - CELE_F31F6.8 - Protein quiver protein-coding
81 13222557 NR_072003 F57C7.7 - CELE_F57C7.7 - ncRNA ncRNA
82 175585 Cel.19565 NM_065510 ins-17 - CELE_F56F3.6 - Insulin-like peptide 17 protein-coding
83 173573 Cel.20284 NM_061802 C33C12.4 - CELE_C33C12.4 - hypothetical protein protein-coding
84 184951 NM_001368429 F26A1.13 - CELE_F26A1.13 - hypothetical protein protein-coding
85 13207346 NR_064902 21ur-6362 - CELE_Y105C5B.979 - ncRNA ncRNA
86 176209 Cel.10581 NM_001129220 polk-1 - CELE_F22B7.6 - DNA polymerase kappa protein-coding
87 13191484 NR_052780 Y56A3A.39 - CELE_Y56A3A.39 - ncRNA ncRNA
88 6418844 Cel.37682 NM_001129654 F09F9.5 - CELE_F09F9.5 - Uncharacterized protein protein-coding
89 13217489 Y32B12B.t1 - CELE_Y32B12B.t1 - tRNA tRNA
90 13210773 NR_068161 21ur-2726 - CELE_Y116A8C.179 - ncRNA ncRNA
91 175186 Cel.7065 NM_064774 cox-17 - CELE_F40G9.2 - Cytochrome OXidase assembly protein protein-coding
92 13210106 NR_067531 21ur-11271 - CELE_Y43D4A.125 - ncRNA ncRNA
93 13209952 NR_067391 21ur-1073 - CELE_Y51H4A.342 - ncRNA ncRNA
94 13207233 NR_064800 21ur-1461 - CELE_Y105C5B.128 - ncRNA ncRNA
95 13195426 NR_055240 21ur-13780 - CELE_H16O14.51 - ncRNA ncRNA
96 13215667 NR_069706 ZK836.8 - CELE_ZK836.8 - ncRNA ncRNA
97 13210057 NR_067486 21ur-7835 - CELE_Y43D4A.89 - ncRNA ncRNA
98 178041 Cel.13662 NM_069722 B0035.13 - CELE_B0035.13 - hypothetical protein protein-coding
99 13205726 NR_063336 21ur-12263 - CELE_Y105C5A.1125 - ncRNA ncRNA
100 180727 Cel.772 NM_001029192 ham-2 - CELE_C07A12.1 - Uncharacterized protein protein-coding