Mercurial > repos > iuc > homer_gtf_to_annotations
annotate test-data/phiXcpg.txt @ 2:396cf2c12173 draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/homer commit 186b72f369eb2a11d92f4d63cac2e8ebe386b9bd"
author | iuc |
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date | Mon, 13 Dec 2021 15:15:14 +0000 |
parents | 8ebb6520eef4 |
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8ebb6520eef4
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/homer commit e49d856e0181edc6120220a1b819cba2466a4289"
iuc
parents:
diff
changeset
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1 PeakID (cmd=annotatePeaks.pl test-data/fake_phix_peaks.bed test-data/phiX174.fasta -CpG) Chr Start End Strand Peak Score Focus Ratio/Region Size Annotation Detailed Annotation Distance to TSS Nearest PromoterID Entrez ID Nearest Unigene Nearest Refseq Nearest Ensembl Gene Name Gene Alias Gene Description Gene Type CpG% GC% |
8ebb6520eef4
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/homer commit e49d856e0181edc6120220a1b819cba2466a4289"
iuc
parents:
diff
changeset
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2 1 phiX174 1401 1500 + 0 NA NA NA NA NA 0.060606 0.470000 |