Mercurial > repos > iuc > homer_gtf_to_annotations
view test-data/annotations_default_simplified.txt @ 2:396cf2c12173 draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/homer commit 186b72f369eb2a11d92f4d63cac2e8ebe386b9bd"
author | iuc |
---|---|
date | Mon, 13 Dec 2021 15:15:14 +0000 |
parents | 8ebb6520eef4 |
children |
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Intergenic chr2 1 74667309 + N 1900000000 promoter-TSS (ENSMUST00000001872) chr2 74667310 74668410 + P 1 exon (ENSMUST00000001872, exon 1 of 2) chr2 74668411 74669078 + E 33 intron (ENSMUST00000001872, intron 1 of 1) chr2 74669079 74669885 + I 88 exon (ENSMUST00000001872, exon 2 of 2) chr2 74669886 74670136 + E 35 3' UTR (ENSMUST00000001872, exon 2 of 2) chr2 74670137 74671498 + 3UTR 34 TTS (ENSMUST00000001872) chr2 74671499 74672599 + TTS 17 Intergenic--2 chr2 74672600 74674012 + N 1900000000 promoter-TSS (ENSMUST00000001878) chr2 74674013 74675113 + P 2 exon (ENSMUST00000001878, exon 1 of 2) chr2 74675114 74675654 + E 37 intron (ENSMUST00000001878, intron 1 of 1) chr2 74675655 74675813 + I 88 exon (ENSMUST00000001878, exon 2 of 2) chr2 74675814 74676052 + E 39 3' UTR (ENSMUST00000001878, exon 2 of 2) chr2 74676053 74677604 + 3UTR 38 TTS (ENSMUST00000001878) chr2 74677605 74678556 + TTS 18 promoter-TSS (ENSMUST00000048086) chr2 74678557 74679657 + P 4 exon (ENSMUST00000048086, exon 1 of 2) chr2 74679658 74679809 + E 44 intron (ENSMUST00000048086, intron 1 of 1) chr2 74679810 74681322 + I 88 promoter-TSS (ENSMUST00000142312) chr2 74681323 74682423 + P 11 exon (ENSMUST00000142312, exon 1 of 2) chr2 74682424 74682445 + E 69 promoter-TSS (ENSMUST00000136302) chr2 74682446 74683546 + P 10 intron (ENSMUST00000136302, intron 1 of 2) chr2 74683547 74683902 + I 88 exon (ENSMUST00000048086, exon 2 of 2) chr2 74683903 74684067 + E 45 TTS (ENSMUST00000142312) chr2 74684068 74685168 + TTS 27 intron (ENSMUST00000136302, intron 2 of 2) chr2 74684357 74685168 + I 88 exon (ENSMUST00000048086, exon 2 of 2)--2 chr2 74685169 74686915 + E 45 TTS (ENSMUST00000048086) chr2 74686916 74688016 + TTS 20 intron (ENSMUST00000136302, intron 2 of 2)--2 chr2 74688017 74690923 + I 88 promoter-TSS (ENSMUST00000061745) chr2 74690924 74692024 + P 6 exon (ENSMUST00000061745, exon 1 of 2) chr2 74692025 74692724 + E 51 intron (ENSMUST00000061745, intron 1 of 1) chr2 74692725 74694090 + I 88 exon (ENSMUST00000061745, exon 2 of 2) chr2 74694091 74694093 + E 53 TTS (ENSMUST00000136302) chr2 74694094 74694519 + TTS 26 promoter-TSS (ENSMUST00000126966) chr2 74694520 74695620 + P 9 TTS (ENSMUST00000061745) chr2 74695621 74696105 + TTS 22 TTS (ENSMUST00000190845) chr2 74696106 74696726 - TTS 31 promoter-TSS (ENSMUST00000059272) chr2 74696727 74697827 + P 5 promoter-TSS (ENSMUST00000190845) chr2 74697828 74698586 - P 15 exon (ENSMUST00000059272, exon 1 of 2) chr2 74698587 74698833 + E 47 intron (ENSMUST00000059272, intron 1 of 1) chr2 74698834 74699179 + I 88 exon (ENSMUST00000059272, exon 2 of 2) chr2 74699180 74699421 + E 49 3' UTR (ENSMUST00000059272, exon 2 of 2) chr2 74699422 74700005 + 3UTR 48 TTS (ENSMUST00000198895) chr2 74700006 74700107 - TTS 32 TTS (ENSMUST00000059272) chr2 74700108 74701041 + TTS 21 promoter-TSS (ENSMUST00000198895) chr2 74701042 74702142 - P 16 Intergenic--3 chr2 74702143 74703614 + N 1900000000 promoter-TSS (ENSMUST00000151380) chr2 74703615 74703904 + P 14 promoter-TSS (ENSMUST00000019749) chr2 74703905 74705005 + P 3 promoter-TSS (ENSMUST00000074721) chr2 74705006 74705252 + P 7 5' UTR (ENSMUST00000019749, exon 1 of 2) chr2 74705253 74705547 + 5UTR 40 exon (ENSMUST00000019749, exon 1 of 2) chr2 74705548 74706118 + E 41 intron (ENSMUST00000074721, intron 1 of 1) chr2 74706119 74706513 + I 88 exon (ENSMUST00000019749, exon 2 of 2) chr2 74706514 74706711 + E 43 TTS (ENSMUST00000151380) chr2 74706712 74707206 + TTS 30 TTS (ENSMUST00000074721) chr2 74707207 74707832 + TTS 23 TTS (ENSMUST00000019749) chr2 74707833 74708933 + TTS 19 Intergenic--4 chr2 74708934 74709192 + N 1900000000 TTS (ENSMUST00000145799) chr2 74709193 74710293 - TTS 29 intron (ENSMUST00000145799, intron 2 of 2) chr2 74710294 74710926 - I 88 promoter-TSS (ENSMUST00000111983) chr2 74710927 74712027 + P 8 promoter-TSS (ENSMUST00000144040) chr2 74712028 74712029 + P 12 5' UTR (ENSMUST00000111983, exon 1 of 3) chr2 74712030 74712316 + 5UTR 58 intron (ENSMUST00000111983, intron 1 of 2) chr2 74712317 74714270 + I 88 exon (ENSMUST00000145799, exon 2 of 3) chr2 74714271 74714401 - E 80 intron (ENSMUST00000145799, intron 1 of 2) chr2 74714402 74715705 - I 88 exon (ENSMUST00000145799, exon 1 of 3) chr2 74715706 74715895 - E 81 promoter-TSS (ENSMUST00000145799) chr2 74715896 74716996 - P 13 intron (ENSMUST00000111983, intron 1 of 2)--2 chr2 74716997 74722552 + I 88 exon (ENSMUST00000144040, exon 2 of 7) chr2 74722553 74722631 + E 73 intron (ENSMUST00000144040, intron 2 of 6) chr2 74722632 74723331 + I 88 exon (ENSMUST00000144040, exon 3 of 7) chr2 74723332 74723367 + E 74 intron (ENSMUST00000144040, intron 3 of 6) chr2 74723368 74725462 + I 88 exon (ENSMUST00000144040, exon 4 of 7) chr2 74725463 74725597 + E 75 intron (ENSMUST00000144040, intron 4 of 6) chr2 74725598 74725844 + I 88 exon (ENSMUST00000144040, exon 5 of 7) chr2 74725845 74725978 + E 76 intron (ENSMUST00000144040, intron 5 of 6) chr2 74725979 74726875 + I 88 exon (ENSMUST00000144040, exon 6 of 7) chr2 74726876 74726932 + E 77 intron (ENSMUST00000144040, intron 6 of 6) chr2 74726933 74728358 + I 88 exon (ENSMUST00000144040, exon 7 of 7) chr2 74728359 74728767 + E 78 TTS (ENSMUST00000144040) chr2 74728768 74729868 + TTS 28 intron (ENSMUST00000111983, intron 1 of 2)--3 chr2 74729869 74743927 + I 88 5' UTR (ENSMUST00000111983, exon 2 of 3) chr2 74743928 74744011 + 5UTR 59 exon (ENSMUST00000111983, exon 2 of 3) chr2 74744012 74744555 + E 60 intron (ENSMUST00000111983, intron 2 of 2) chr2 74744556 74746321 + I 88 exon (ENSMUST00000111983, exon 3 of 3) chr2 74746322 74747079 + E 62 3' UTR (ENSMUST00000111983, exon 3 of 3) chr2 74747080 74748170 + 3UTR 61 TTS (ENSMUST00000111983) chr2 74748171 74749271 + TTS 24 Intergenic--5 chr2 74749272 1500000000 + N 1900000000