Mercurial > repos > iuc > humann2
comparison humann2.xml @ 5:bb13650e8115 draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/humann2 commit 55eb503f50c54695ec36c3d4671c2b3e64d05f40"
| author | iuc |
|---|---|
| date | Fri, 05 Feb 2021 18:28:51 +0000 |
| parents | 019864881779 |
| children | cda49fede0c2 |
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| 4:019864881779 | 5:bb13650e8115 |
|---|---|
| 1 <tool id="humann2" name="HUMAnN2" version="@WRAPPER_VERSION@.1"> | 1 <tool id="humann2" name="HUMAnN2" version="@WRAPPER_VERSION@.2"> |
| 2 <description>to profile presence/absence and abundance of microbial pathways and gene families</description> | 2 <description>to profile presence/absence and abundance of microbial pathways and gene families</description> |
| 3 <macros> | 3 <macros> |
| 4 <import>humann2_macros.xml</import> | 4 <import>humann2_macros.xml</import> |
| 5 </macros> | 5 </macros> |
| 6 <stdio> | 6 <expand macro="stdio"/> |
| 7 <regex match="Failed to allocate sufficient memory." source="stderr" level="fatal_oom" description="Out of memory error occurred" /> | 7 <expand macro="requirements"> |
| 8 </stdio> | |
| 9 <expand macro="requirements"> | |
| 10 <requirement type="package" version="2.3.0">bowtie2</requirement> | 8 <requirement type="package" version="2.3.0">bowtie2</requirement> |
| 11 <requirement type="package" version="2.6.0">metaphlan2</requirement> | 9 <requirement type="package" version="2.6.0">metaphlan2</requirement> |
| 12 <requirement type="package" version="0.8.24">diamond</requirement> | 10 <requirement type="package" version="0.8.24">diamond</requirement> |
| 13 <requirement type="package" version="2.24">rapsearch</requirement> | 11 <requirement type="package" version="2.24">rapsearch</requirement> |
| 14 <requirement type="package" version="2.7.10">python</requirement> | 12 <requirement type="package" version="2.7.10">python</requirement> |