view macros.xml @ 2:5ae955d5bd2b draft

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/humann commit 0966faf8782e9043772acfa32f4a4281687a19dd

<?xml version="1.0"?>
<macros>
    <token name="@TOOL_VERSION@">3.6.0</token>
    <token name="@VERSION_SUFFIX@">0</token>
    <token name="@PROFILE@">22.01</token>
    <xml name="edam_ontology">
        <edam_topics>
            <edam_topic>topic_3174</edam_topic>
            <edam_topic>topic_0194</edam_topic>
        </edam_topics>
        <edam_operations>
            <edam_operation>operation_2478</edam_operation>
            <edam_operation>operation_0324</edam_operation>
        </edam_operations>
    </xml>
    <xml name="requirements">
        <requirements>
            <requirement type="package" version="@TOOL_VERSION@">humann</requirement>
            <yield/>
        </requirements>
    </xml>
    <xml name="version">
        <version_command>humann --version</version_command>
    </xml>
    <token name="@HELP_HEADER@">
What it does
============

HUMAnN is a pipeline for efficiently and accuretly profiling the presence/absence and abundance of microbial pathways in a community from metagenomic or metatranscriptomic sequencing data. 

Read more about the tool: http://huttenhower.sph.harvard.edu/humann
    </token>
    <xml name="citations">
        <citations>
            <citation type="doi">10.7554/eLife.65088</citation>
            <citation type="doi">10.1371/journal.pcbi.1002358</citation>
        </citations>
    </xml>
</macros>