view test-data/meme-in1.fa @ 11:91cf1290ba6f draft default tip

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit e7a89841d59689e87db592e112f9c8fb5331d954
author iuc
date Thu, 02 Mar 2023 15:12:39 +0000
parents df56795c3d89
children
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>CHICKEN_HEBEI_326_2005
ATGGAGAGAATAGTGCTTCTTCTTGCAATAATCGGTCTTGTTAAAAGTGA
TCAGATTTGCATTGGTTACCATGCAAACAACTCGACAGAGCAGGTTGACA
CAATAATGGAAAAGAACGTTACTGTTACACATGCTCAAGACATACTGGAG
AAGACACACAACGGGAAGCTCTGCAACCCAGATGGAGTGAAGCCTCTAAT
TTTGAAAGATTGTAGTGTAGCTGGATGGCTCCTCGGAAACCCAATGTGTG
ACGAATTTATCAATGTGCCGGAATGGTCTTACATAGTGGAGAAGGCCAGT
CCAGCCAATGGCCTCTGTTACCCAGGGGATTTCAATGACTATGAAGAACT
GAAACACCTATTGAGCAGAATAAACCATTTTGAGAAAATTCAGATCATCC
CCAAAAGTTCTTGGTCCGATCATGGAGCCTCATCAGGGGTGAGCTCAGCA
TGTTCCTATCTGGGGAAGCCCTCCTTTTTCAGAAATGTGGTATGGCTTAT
CAAAAAGAATAATACATACCCACCAATAAAGGTGAGCTACAACAATACCA
ACCAAGAAGATCTTTTGGTACTGTGGGGGATTCACCATCCCAATGATGAG
GCAGAGCAGATAAAGATCTATCAAAACCCAACCACCTATATTTCCGTTGG
AACATCAACACTAAACCAGAGATTGGTACCAAAAATAGCTACTAGATCCA
AAGTAAACGGGCAAAGTGGAAGAATGGAGTTCTTCTGGACAATTTTAAAG
CCGAATGATGCTATCAATTTCGATAGTAATGGAAATTTCATTGCTCCAGA
ATATGCATACAAAATTGTCAAGAAAGGGGACTCAGCGATTATGAAAAGTG
AATTGGAATATGGCAACTGCAACACCAAGTGTCAAACTCCAATGGGGGCG
ATAAATTCTAGTATGCCATTCCACAACATACACCCTCTCACCGTCGGGGA
ATGCCCCAAATATGTGAAATCAAACAGATTAGTCCTCGCGACTGGACTCA
GAAATGCCCCTCAAAGAGAGGGAGGAAGAAAAAAGAGAGGACTATTTGGA
GCCATAGCAGGGTTTATAGAGGGAGGATGGCAGGGAATGGTAGATGGTTG
GTATGGGTACCACCATAGCAATGAGCAGGGGAGTGGATACGCTGCAGACA
AAGAATCCACTCAAAAGGCAATAGATGGAGTCACCAATAAGGTCAACTCG
ATCATTGACAAAATGAACACTCAGTTTGAGGCCGTTGGAAGGGAATTTAA
TAACTTAGAAAGGAGAATAGAAAATTTAAACAAGAAGATGGAGGACGGAT
TCCTAGATGTCTGGACTTATAACGCTGAACTTCTGGTTCTCATGGAAAAT
GAGAGAACTCTAGACTTTCATGACTCAAATGTCAAGAACCTTTACGAAAA
GGTCCGACTACAGCTTAGGGATAATGCAAAGGAGCTGGGTAACGGTTGTT
TCGAGTTCTATCACAAATGTGATAATGAATGTATGGAAAGTGTAAAAAAC
GGAACGTATGACTACCCGCAGTATTCAGAAGAAGCAAGACTAAACAGAGA
GGAAATAAGTGGAGTAAAATTGGAATCAATGGGAACTTACCAAATACTGT
CAATTTATTCAACAGTGGCGAGTTCCCTAGCATTGGCAATCATGGTAGCT
GGTCTATCTTTATGGATGTGCTCCAATGGATCGTTACAATGCAGAATT
>MALLARD_VIETNAM_16_2003
ATGGAGAAAATAGTGCTTCTTTTTGCAATAGTCAGTCTTGTTAAAAGTGA
TCAGATTTGCATTGGTTACCATGCAAACAACTCGACAGAGCAGGTTGACA
CAATAATGGAAAAGAACGTTACTGTTACACATGCCCAAGACATACTGGAA
AAGACACACAACGGGAAGCTCTGCGATCTAGATGGAGTGAAGCCTCTAAT
TTTGAGAGATTGTAGTGTAGCTGGATGGCTCCTCGGAAACCCAATGTGTG
ACGAATTCATCAATGTGCCGGAATGGTCTTACATAGTGGAGAAGGCCAAT
CCAGTCAATGACCTCTGTTACCCAGGGGATTTCAATGAATATGAAGAATT
GAAACACCTATTGAGCAGAATAAACCATTTTGAGAAAATTCAGATCATCC
CCAAAAGTTCTTGGTCCAGTCATGAAGCCTCATTAGGGGTGAGCTCAGCA
TGTCCATACCAGGGAAAGTCCTCCTTTTTCAGAAATGTGGTATGGCTTGT
CAAAAAGAACAGTACATACCCAACAATAAAGAGGAGCTACAATAATACCA
ACCAAGAAGATCTTTTGGTACTGTGGGGGATTCACCATCCTAATGATGCG
GCAGAGCAGACAAAGCTCTATCAAAATCCAACCACCTACATTTCCGTTGG
GACATCAACACTAAACCAGAGATTGGTACCAAGAATAGCTACTAGATCCA
AAGTAAACGGGCAAAGTGGAAGGATGGAGTTCTTCTGGACAATTTTAAAA
CCGAATGATGCAATCAACTTCGAGAGTAATGGAAATTTCATTGCTCCAGA
ATATGCATACAAAATTGTCAAGAAAGGGGACTCAACAATTATGAAAAGTG
AATTGGAATATGGTAACTGCAACACCAAGTGTCAAACTCCAATGGGGGCG
ATAAACTCTAGTATGCCATTCCACAATATACACCCCCTCACCATCGGGGA
ATGCCCCAAATATGTGAAATCAAACAGATTAGTCCTTGCGACTGGGCTCA
GAAATAGCCCTCAAAGAGAGAGAAGAAGAAAAAAGAGAGGATTATTTGGA
GCTATAGCAGGTTTTATAGAGGGAGGATGGCAAGGAATGGTAGATGGTTG
GTATGGGTACCACCATAGCAATGAGCAGGGGAGTGGGTACGCTGCAGACA
AAGAATCCACTCAAAAGGCAATAGATGGAGTCACCAATAAGGTCAACTCG
ATCATTGACAAAATGAACACTCAGTTTGAGGCCGTTGGAAGGGAATTTAA
CAACTTAGAAAGGAGAATAGAGAATTTAAACAAGAAGATGGAAGACGGGT
TCCTAGATGTCTGGACTTATAATGCTGAACTTCTGGTTCTCATGGAAAAT
GAGAGAACTCTAGACTTTCATGACTCAAATGTCAAGAACCTTTACGACAA
GGTCCGACTACAGCTTAGGGATAATGCAAAGGAGCTGGGTAACGGTTGTT
TCGAGTTCTATCATAAATGTGATAATGAATGTATGGAAAGTGTAAGAAAC
GGAACGTATGACTACCCGCAGTATTCAGAAGAAGCAAGACTAAAAAGAGA
GGAAATAAGTGGAGTAAAATTGGAATCAATAGGAATTTACCAAATACTGT
CAATTTATTCTACAGTGGCGAGTTCCCTAGCACTGGCAATCATGGTAGCT
GGTCTATCCTTATGGATGTGCTCCAATGGGTCGTTACAATGCAGA---
>CHICKEN_CK_160_2005
ATGGAGAAAATAGTGCTTCTTTTTGCAATAGTCAGTCTTGTTAAAAGTGA
TCAGATTTGCATTGGTTACCATGCAAACAACTCAACAGAGCAGGTTGACA
CAATAATGGAAAAGAACGTTACTGTTACACATGCCCAAGACATACTGGAA
AAGACACACAACGGGAAGCTCTGTGATCTAGATGGAGTGAAGCCTCTAAT
TTTGAGAGATTGTAGTGTAGCTGGATGGCTCCTTGGAAACCCAATGTGTG
ATGAATTCATCAATGTGCCGGAATGGTCTTACATAGTGGAGAAGGCCAAT
CCAGCCAATGACCTCTGTTACCCAGGGGATTTCAATGACTATGAAGAATT
GAAACACCTATTGAGCAGAATAAACCATTTTGAGAAAATTCAGATCATCC
CCAAAAGTTCTTGGTCCAGTCATGAAGCCTCATTAGGAGTGAGCTCAGCA
TGTCCATATCAGGGAAAGTCCTCCTTTTTCAGAAATGTGGTATGGCTTAT
CAAAAAGAACAGTACATACCCAACAATAAAGAGGAGCTACAATAATACCA
ACCAAGAAGATCTTTTGGTACTGTGGGGGATTCACCATCCTAATGATGCG
GCAGAGCAGACAAAGCTCTATCAAAACCCAACCACCTACATTTCCGTTGG
GACATCAACACTAAACCAGAGATTGGTACCAAGAATAGCTACTAGATCCA
AAGTAAACGGGCAAAGTGGAAGGATGGAGTTCTTCTGGACAATTTTAAAA
CCGAATGATGCAATCAACTTCGAGAGTAATGGAAATTTCATTGCTCCAGA
ATATGCATACAAAATTGTCAAGAAAGGGGACTCAACAATTATGAAAAGTG
AATTGGAATATGGTAACTGCAACACCAAGTGTCAAACTCCAATGGGGGCG
ATAAACTCTAGTATGCCATTCCACAATATACACCCTCTCACCATCGGGGA
ATGCCCCAAATATGTGAAATCAAACAGATTAGTCCTTGCGACTGGACTCA
GAAATAGCCCTCAAAGAGAGAAAAGAAGAAAAAAGAGAGGATTATTTGGA
GCTATAGCAGGTTTTATAGAGGGAGGATGGCAGGGAATGGTAGATGGTTG
GTATGGGTACCACCATAGCAATGAGCAGGGGAGTGGGTACGCTGCAGACA
AAGAATCCACTCAAAAGGCAATAGATGGAGTCACCAATAAGGTCAACTCG
ATCATTGACAAAATGAACACTCAGTTTGAGGCCGTTGGAAGGGAATTTAA
CAACTTAGAAAGGAGAATAGAGAATTTAAACAAGAAGATGGAAGACGGGT
TCCTAGATGTCTGGACTTATAATGCTGAACTTCTGGTTCTCATGGAAAAT
GAGAGAACTCTAGACTTTCATGACTCAAATGTCAAGAACCTTTACGACAA
GGTCCGACTACAGCTTAGGGATAATGCAAAGGAGCTGGGTAACGGTTGTT
TCGAGTTCTATCATAAATGTGATAATGAATGTATGGAAAGTGTAAGGAAC
GGAACGTATGACTACCCGCAGTATTCAGAAGAAGCAAGACTAAAAAGAGA
GGAAATAAGTGGAGTAAAATTGGAATCAATAGGAATTTACCAAATACTGT
CAATTTATTCTACAGTAGCGAGTTCCCTAGCACTGGCAATCATGGTAGCT
GGTCTATCCTTATGGATGTGCTTCAATGGGTCGTTACAATGCAGAATT
>CK_HK_WF157_2003
ATGGAGAAAATAGTGCTTCTTCTTGCAATAGTCAGTCTTGTTAAAAGTGA
TCAGATTTGCATTGGTTACCATGCAAACAACTCGACAGAGCAGGTTGACA
CAATAATGGAAAAGAACGTTACTGTTACACATGCCCAAGACATACTGGAA
AAGACCCACAACGGGAAGCTCTGCGACCTAGATGGAGTGAAGCCTCTAAT
TTTGAGAGATTGTAGTGTAGCTGGATGGCTCCTCGGGAACCCAATGTGTG
ACGAATTCATCAATGTACCGGAATGGTCTTACATAGTGGAGAAGGCCAGT
CCATCCAATGACCTCTGTTACCCAGGGGATTTCAACAATTATGAAGAACT
GAAACACCTATTGAGCAGAATAAACCATTTTGAGAAAATTCAGATCATCC
CCAAAAGCTCTTGGTCCAATCATGAAGCCTCATCAGGGGTGAGCTCAGCA
TGTCCATACCTGGGAAAGCCCTCCTTTTTCAGAAATGTGGTATGGCTTAT
CAAAAAGAACAGTACATACCCAACAATAAAGAGGAGCTACAATAATACCA
ACCAAGAAGATCTTTTGGTACTGTGGGGGATTCACCATCCTAATGATGCG
GCAGAGCAGATAAAGCTCTATCAAAACCCAACCACCTATATTTCCGTTGG
AACATCAACACTAAACCAGAGATTGGTACCAAAAATAGCTACTAGATCCA
AAGTAAACGGGCAAAGTGGAAGGATGGAGTTCTTCTGGACAATTTTAAAA
CCGAATGATGCAATCAACTTCGAGAGTAATGGAAATTTCATTGCTCCAGA
ATATGCATACAAAATTGTCAAGAAAGGGGACTCAGCAATTATGAAAAGTG
AATTGGAATATGGTAACTGCAACACCAAGTGTCAAACTCCAATGGGGGCG
ATAAACTCTAGTATGCCCTTCCACAACATACACCCTCTCACCATCGGGGA
ATGCCCCAAATATGTGAAATCAAACAGACTAGTCCTTGCGACTGGGCTCA
GAAATAGCCCTCAAAGAGAGAGAAGAAGAAAAAAGAGAGGACTATTTGGA
GCTATAGCGGGTTTTATAGAGGGAGGATGGCAGGGAATGGTAGATGGTTG
GTATGGATACCACCATAGCAATGAGCAGGGGAGTGGATACGCTGCAGACA
AAGAATCCACTCAAAAGGCAATAGATGGAGTCACCAATAAGGTCAACTCG
ATCATTGACAAAATGAACACTCAGTTTGAGGCCGTTGGAAGGGAATTTAA
TAACTTAGAAAGGAGAATAGAGAATTTAAACAAGAAGATGGAAGACGGAT
TCCTAGATGTCTGGACTTATAATGCTGAACTTCTAGTTCTCATGGAAAAT
GAGAGAACTCTAGACTTTCATGACTCAAATGTCAAGAACCTTTACGACAA
GGTCCGACTACAGCTTAGGGATAATGCAAAAGAGCTGGGTAACGGTTGTT
TCGAGTTCTATCACAAATGTGATAATGAATGTATGGAAAGTGTAAGAAAC
GGAACGTATGACTACTCGCAGTATTCAGAAGAAGCAAGACTAAAAAGAGA
GGAAATAAGTGGAGTAAAATTGGAATCAATAGGAACTTACCAAATACTGT
CAATTTATTCAACAGTGGCGAGTTCCCTAGCACTGGCAATCATGGTAGCT
GGTCTATCTTTATGGATGTGCTCCAATGGTTCGTTACAATGT------
>SWINE_ANHUI_1_2004
ATGGAGAAAATAGTGCTTCTTCTTGCAATAGTCAGTCTTGTTAAAGGTGA
TCAGATTTGCACTGGTTACCATGCAAACAACTCGACAGAGCAGGTTGACA
CAATAATGGAAAAGAACGTTACTGTTACACATGCTCAAGACATACTGGAA
AAGACACACAACGGGAAGCTCTGCGACCTAGATGGAGTGAAGCCTCTAAT
TTTAAGAGATTGTAGTGTAGCTGGATGGCTCCTCGGGAACCCAATGTGTG
ACGAATTCATCAATGTGCCGGAATGGTCTTACATAGTGGAGAAGGCCAAT
CCAGCCAATGACCTCTGTTACCCAGGGGATTTCAACGACTATGAAGAACT
GAAACACCTATTGAGCAGAATAAACCATTTTGAGAAAATTCAGATCATCC
CCAAAAGTTCTTGGTCCGATCATGAAGCCTCATCAGGGGTGAGCTCAGCA
TGTCCATACCAGGGAAGGTCCTCCTTTTTCAGAAATGTGGTATGGCTTAT
CAAAAAGAACAGTGCATACCCAACAATAAAGAGGAGCTACAATAATACCA
ACCAAGAAGATCTTTTGGTACTGTGGGGGATTCACCACCCTAATGATGCG
GCAGAGCAGATAAAGCTCTATCAAAACCCAACCACCTATATTTCCGTTGG
GACATCAACACTAAACCAGAGATTGGTACCAAAAATAGCTACTAGATCCA
AAGTAAACGGACAAAGTGGAAGAATGGAGTTCTTCTGGACAATTTTAAAA
CCGAATGATGCTATCAATTTCGAGAGTAATGGAAATTTCATTGCTCCAGA
ATATGCATACAAAATTGTCAAGAAAGGGGACTCTGCAATTATGAAAAGTG
AATTGGAATATGGCAACTGCAACACCAAGTGTCAAACTCCAGTGGGGGCG
ATAAATTCTAGCATGCCATTCCACAACATACACCCTCTCACCATCGGGGA
ATGCCCCAAATATGTGAAATCAAACAGATTAGTCCTTGCGACTGGACTCA
GAAATGCCCCTCAAAGAGAGGGAAGAAGAAAAAAGAGAGGACTATTTGGA
GCTATAGCAGGGTTTATAGAGGGAGGATGGCAGGGGATGGTAGATGGTTG
GTATGGGTACCACCATAGCAATGAGCAGGGGAGTGGATACGCTGCAGACA
AAGAATCCACTCAAAAAGCAATAGATGGAGTCACCAATAAGGTCAACTCG
ATCATTGACAAAATGAACACTCAGTTTGAGGCCGTTGGAAGGGAATTTAA
TAACTTAGAAAGGAGAATAGAAAATTTAAACAAGAAGATGGAGGACGGAT
TCCTAGATGTCTGGACTTATAATGCTGAACTTCTGGTTCTCATGGAAAAT
GAGAGAACTCTAGACTTTCATGACTCAAATGTCAAGAACCTTTACGACAA
GGTCCGACTACAGCTTAGGGATAATGCAAAGGAGCTGGGTAACGGTTGTT
TCGAGTTCTATCACAGATGTGATAATGAATGTATGGAAAGTGTAAGAAAC
GGAACGTATGACTACCCGCAGTATTCGGAAGAAGCAAGACTAAACAGAGA
GGAAATAAGTGGAGTAAAATTGGAATCAATAGGAACTTACCAAATACTGT
CAATTTATTCAACAGTGGCGAGTTCCCTAGCACTGGCAATCATGGTGGCT
GGTCTATCTTTATGGATGTGCTCCAATGGATCGTTACAATGCAGAATT