Mercurial > repos > iuc > hyphy_bgm
annotate test-data/summary/nsp8.MEME.json @ 34:4515f2f64e13 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 821e0f3e4546bc55e093ab63bd9f9b57f2bf772d
author | iuc |
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date | Thu, 18 Aug 2022 14:01:09 +0000 |
parents | 1c3a2f66373f |
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rev | line source |
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1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
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1 { |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
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2 "MLE":{ |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
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3 "content":{ |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
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4 "0": [ |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
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5 [0, 0, 1, 0, 0, 0, 1, 0, 0, 0, 0], |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
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6 [0, 0, 1, 0, 0, 0, 1, 0, 0, 0, 0], |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
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1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
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8 [0, 0, 1, 0, 0, 0, 1, 0, 0, 0, 0], |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
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9 [0.0002152055713864022, 5.380139284660055e-05, 1, 0.5537159057721711, 0, 0, 0.6666666666666666, 0, 0, -9.653547986238197, -9.653323462942367], |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
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10 [0, 0, 1, 0, 0, 0, 1, 0, 0, 0, 0], |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
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11 [0, 0, 1, 0, 0, 0, 1, 0, 0, 0, 0], |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
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1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
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13 [0, 0, 1, 1.464518485321612, 0, 0, 0.6666666666666666, 0, 0, -10.62393719963694, -10.62320682078165], |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
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14 [0, 0, 1, 0, 0, 0, 1, 0, 0, 0, 0], |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
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15 [0, 0, 1, 0, 0, 0, 1, 0, 0, 0, 0], |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
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16 [0, 0, 1, 0, 0, 0, 1, 0, 0, 0, 0], |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
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17 [0, 0, 1, 0, 0, 0, 1, 0, 0, 0, 0], |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
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1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
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1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
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1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
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21 [0, 0, 1, 0, 0, 0, 1, 0, 0, 0, 0], |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
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1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
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23 [0, 0, 1, 0, 0, 0, 1, 0, 0, 0, 0], |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
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24 [0, 0, 1, 0, 0, 0, 1, 0, 0, 0, 0], |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
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25 [0, 0, 1, 1.640491119619624, 0, 0, 0.6666666666666666, 0, 0, -9.354308226158436, -9.353594494276042], |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
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1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
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1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
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28 [0, 0, 1, 0, 0, 0, 1, 0, 0, 0, 0], |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
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1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
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1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
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1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
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1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
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1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
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1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
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1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
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1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
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1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
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diff
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1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
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1c3a2f66373f
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iuc
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diff
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1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
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1c3a2f66373f
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iuc
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diff
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1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
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1c3a2f66373f
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iuc
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1c3a2f66373f
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iuc
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1c3a2f66373f
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iuc
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1c3a2f66373f
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iuc
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diff
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1c3a2f66373f
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iuc
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diff
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1c3a2f66373f
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iuc
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1c3a2f66373f
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iuc
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1c3a2f66373f
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iuc
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1c3a2f66373f
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iuc
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1c3a2f66373f
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iuc
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1c3a2f66373f
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iuc
parents:
diff
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1c3a2f66373f
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iuc
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1c3a2f66373f
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iuc
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1c3a2f66373f
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iuc
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1c3a2f66373f
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iuc
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1c3a2f66373f
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iuc
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1c3a2f66373f
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iuc
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1c3a2f66373f
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iuc
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1c3a2f66373f
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iuc
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1c3a2f66373f
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iuc
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1c3a2f66373f
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iuc
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1c3a2f66373f
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iuc
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1c3a2f66373f
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iuc
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1c3a2f66373f
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iuc
parents:
diff
changeset
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iuc
parents:
diff
changeset
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1c3a2f66373f
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iuc
parents:
diff
changeset
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1c3a2f66373f
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iuc
parents:
diff
changeset
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1c3a2f66373f
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iuc
parents:
diff
changeset
|
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1c3a2f66373f
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iuc
parents:
diff
changeset
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1c3a2f66373f
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iuc
parents:
diff
changeset
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1c3a2f66373f
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iuc
parents:
diff
changeset
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1c3a2f66373f
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iuc
parents:
diff
changeset
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1c3a2f66373f
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iuc
parents:
diff
changeset
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1c3a2f66373f
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iuc
parents:
diff
changeset
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1c3a2f66373f
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iuc
parents:
diff
changeset
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1c3a2f66373f
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iuc
parents:
diff
changeset
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1c3a2f66373f
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iuc
parents:
diff
changeset
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1c3a2f66373f
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iuc
parents:
diff
changeset
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1c3a2f66373f
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iuc
parents:
diff
changeset
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1c3a2f66373f
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iuc
parents:
diff
changeset
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1c3a2f66373f
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iuc
parents:
diff
changeset
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1c3a2f66373f
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iuc
parents:
diff
changeset
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1c3a2f66373f
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iuc
parents:
diff
changeset
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1c3a2f66373f
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iuc
parents:
diff
changeset
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1c3a2f66373f
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iuc
parents:
diff
changeset
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1c3a2f66373f
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iuc
parents:
diff
changeset
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1c3a2f66373f
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iuc
parents:
diff
changeset
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1c3a2f66373f
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iuc
parents:
diff
changeset
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1c3a2f66373f
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iuc
parents:
diff
changeset
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iuc
parents:
diff
changeset
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1c3a2f66373f
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iuc
parents:
diff
changeset
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1c3a2f66373f
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iuc
parents:
diff
changeset
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1c3a2f66373f
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iuc
parents:
diff
changeset
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1c3a2f66373f
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iuc
parents:
diff
changeset
|
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1c3a2f66373f
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iuc
parents:
diff
changeset
|
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1c3a2f66373f
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iuc
parents:
diff
changeset
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1c3a2f66373f
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iuc
parents:
diff
changeset
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iuc
parents:
diff
changeset
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1c3a2f66373f
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iuc
parents:
diff
changeset
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1c3a2f66373f
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iuc
parents:
diff
changeset
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1c3a2f66373f
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iuc
parents:
diff
changeset
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1c3a2f66373f
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iuc
parents:
diff
changeset
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1c3a2f66373f
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iuc
parents:
diff
changeset
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1c3a2f66373f
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iuc
parents:
diff
changeset
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1c3a2f66373f
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iuc
parents:
diff
changeset
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1c3a2f66373f
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iuc
parents:
diff
changeset
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1c3a2f66373f
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iuc
parents:
diff
changeset
|
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1c3a2f66373f
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iuc
parents:
diff
changeset
|
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1c3a2f66373f
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iuc
parents:
diff
changeset
|
112 [0, 0, 1, 0, 0, 0, 1, 0, 0, 0, 0], |
1c3a2f66373f
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iuc
parents:
diff
changeset
|
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1c3a2f66373f
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iuc
parents:
diff
changeset
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1c3a2f66373f
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iuc
parents:
diff
changeset
|
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1c3a2f66373f
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iuc
parents:
diff
changeset
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1c3a2f66373f
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iuc
parents:
diff
changeset
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1c3a2f66373f
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iuc
parents:
diff
changeset
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1c3a2f66373f
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iuc
parents:
diff
changeset
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1c3a2f66373f
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iuc
parents:
diff
changeset
|
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1c3a2f66373f
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iuc
parents:
diff
changeset
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iuc
parents:
diff
changeset
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1c3a2f66373f
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iuc
parents:
diff
changeset
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1c3a2f66373f
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iuc
parents:
diff
changeset
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1c3a2f66373f
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iuc
parents:
diff
changeset
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1c3a2f66373f
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iuc
parents:
diff
changeset
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1c3a2f66373f
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iuc
parents:
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changeset
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1c3a2f66373f
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iuc
parents:
diff
changeset
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1c3a2f66373f
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iuc
parents:
diff
changeset
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iuc
parents:
diff
changeset
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iuc
parents:
diff
changeset
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1c3a2f66373f
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iuc
parents:
diff
changeset
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1c3a2f66373f
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iuc
parents:
diff
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1c3a2f66373f
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iuc
parents:
diff
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iuc
parents:
diff
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1c3a2f66373f
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iuc
parents:
diff
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1c3a2f66373f
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iuc
parents:
diff
changeset
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1c3a2f66373f
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iuc
parents:
diff
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iuc
parents:
diff
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1c3a2f66373f
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iuc
parents:
diff
changeset
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1c3a2f66373f
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iuc
parents:
diff
changeset
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1c3a2f66373f
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iuc
parents:
diff
changeset
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1c3a2f66373f
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iuc
parents:
diff
changeset
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1c3a2f66373f
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iuc
parents:
diff
changeset
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iuc
parents:
diff
changeset
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1c3a2f66373f
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iuc
parents:
diff
changeset
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1c3a2f66373f
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iuc
parents:
diff
changeset
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1c3a2f66373f
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iuc
parents:
diff
changeset
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1c3a2f66373f
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iuc
parents:
diff
changeset
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1c3a2f66373f
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iuc
parents:
diff
changeset
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1c3a2f66373f
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iuc
parents:
diff
changeset
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1c3a2f66373f
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iuc
parents:
diff
changeset
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1c3a2f66373f
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iuc
parents:
diff
changeset
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1c3a2f66373f
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iuc
parents:
diff
changeset
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1c3a2f66373f
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iuc
parents:
diff
changeset
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1c3a2f66373f
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iuc
parents:
diff
changeset
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1c3a2f66373f
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iuc
parents:
diff
changeset
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1c3a2f66373f
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iuc
parents:
diff
changeset
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1c3a2f66373f
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iuc
parents:
diff
changeset
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1c3a2f66373f
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iuc
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diff
changeset
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iuc
parents:
diff
changeset
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1c3a2f66373f
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iuc
parents:
diff
changeset
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1c3a2f66373f
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iuc
parents:
diff
changeset
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1c3a2f66373f
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iuc
parents:
diff
changeset
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1c3a2f66373f
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iuc
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diff
changeset
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1c3a2f66373f
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iuc
parents:
diff
changeset
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1c3a2f66373f
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iuc
parents:
diff
changeset
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1c3a2f66373f
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iuc
parents:
diff
changeset
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1c3a2f66373f
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iuc
parents:
diff
changeset
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1c3a2f66373f
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iuc
parents:
diff
changeset
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1c3a2f66373f
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iuc
parents:
diff
changeset
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1c3a2f66373f
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iuc
parents:
diff
changeset
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1c3a2f66373f
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iuc
parents:
diff
changeset
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1c3a2f66373f
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iuc
parents:
diff
changeset
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1c3a2f66373f
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iuc
parents:
diff
changeset
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1c3a2f66373f
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iuc
parents:
diff
changeset
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1c3a2f66373f
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iuc
parents:
diff
changeset
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1c3a2f66373f
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iuc
parents:
diff
changeset
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1c3a2f66373f
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iuc
parents:
diff
changeset
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1c3a2f66373f
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iuc
parents:
diff
changeset
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iuc
parents:
diff
changeset
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1c3a2f66373f
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iuc
parents:
diff
changeset
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1c3a2f66373f
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iuc
parents:
diff
changeset
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1c3a2f66373f
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iuc
parents:
diff
changeset
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1c3a2f66373f
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iuc
parents:
diff
changeset
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1c3a2f66373f
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iuc
parents:
diff
changeset
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1c3a2f66373f
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iuc
parents:
diff
changeset
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1c3a2f66373f
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iuc
parents:
diff
changeset
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1c3a2f66373f
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iuc
parents:
diff
changeset
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1c3a2f66373f
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iuc
parents:
diff
changeset
|
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1c3a2f66373f
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iuc
parents:
diff
changeset
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1c3a2f66373f
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iuc
parents:
diff
changeset
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1c3a2f66373f
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iuc
parents:
diff
changeset
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1c3a2f66373f
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iuc
parents:
diff
changeset
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1c3a2f66373f
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iuc
parents:
diff
changeset
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1c3a2f66373f
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iuc
parents:
diff
changeset
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1c3a2f66373f
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iuc
parents:
diff
changeset
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1c3a2f66373f
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iuc
parents:
diff
changeset
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1c3a2f66373f
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iuc
parents:
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changeset
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199 [0, 0, 1, 0, 0, 0, 1, 0, 0, 0, 0], |
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200 [0, 0, 1, 0, 0, 0, 1, 0, 0, 0, 0], |
1c3a2f66373f
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201 [0, 0, 1, 0, 0, 0, 1, 0, 0, 0, 0], |
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202 [0.0001047939488656373, 2.619848721640933e-05, 1, 1.231388513343972, 0, 0, 0.6666666666666666, 0, 0, -13.77239892007799, -13.77191643637779] |
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203 ] |
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204 }, |
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205 "headers": [ |
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206 ["alpha;", "Synonymous substitution rate at a site"], |
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207 ["β<sup>-</sup>", "Non-synonymous substitution rate at a site for the negative/neutral evolution component"], |
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208 ["p<sup>-</sup>", "Mixture distribution weight allocated to β<sup>-</sup>; loosely -- the proportion of the tree evolving neutrally or under negative selection"], |
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209 ["β<sup>+</sup>", "Non-synonymous substitution rate at a site for the positive/neutral evolution component"], |
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210 ["p<sup>+</sup>", "Mixture distribution weight allocated to β<sup>+</sup>; loosely -- the proportion of the tree evolving neutrally or under positive selection"], |
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211 ["LRT", "Likelihood ratio test statistic for episodic diversification, i.e., p<sup>+</sup> > 0 <emph>and<emph> β<sup>+</sup> > α"], |
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212 ["p-value", "Asymptotic p-value for episodic diversification, i.e., p<sup>+</sup> > 0 <emph>and<emph> β<sup>+</sup> > α"], |
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213 ["# branches under selection", "The (very approximate and rough) estimate of how many branches may have been under selection at this site, i.e., had an empirical Bayes factor of 100 or more for the β<sup>+</sup> rate"], |
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214 ["Total branch length", "The total length of branches contributing to inference at this site, and used to scale dN-dS"], |
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215 ["MEME LogL", "Site Log-likelihood under the MEME model"], |
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216 ["FEL LogL", "Site Log-likelihood under the FEL model"] |
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217 ] |
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218 }, |
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219 "analysis":{ |
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220 "authors":"Sergei L. Kosakovsky Pond, Steven Weaver", |
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221 "citation":"Detecting Individual Sites Subject to Episodic Diversifying Selection. _PLoS Genet_ 8(7): e1002764.", |
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222 "contact":"spond@temple.edu", |
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223 "info":"MEME (Mixed Effects Model of Evolution)\n estimates a site-wise synonymous (α) and a two-category mixture of non-synonymous\n (β-, with proportion p-, and β+ with proportion [1-p-]) rates, and\n uses a likelihood ratio test to determine if β+ > α at a site.\n The estimates aggregate information over a proportion of branches at a site,\n so the signal is derived from\n episodic diversification, which is a combination of strength of selection [effect size] and\n the proportion of the tree affected. A subset of branches can be selected\n for testing as well, in which case an additional (nuisance) parameter will be\n inferred -- the non-synonymous rate on branches NOT selected for testing. Multiple partitions within a NEXUS file are also supported\n for recombination - aware analysis.\n ", |
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224 "requirements":"in-frame codon alignment and a phylogenetic tree", |
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225 "version":"2.1.2" |
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226 }, |
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227 "branch attributes":{ |
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228 "0":{ |
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229 "Node20":{ |
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230 "EBF site 101 (partition 1)":1, |
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231 "EBF site 103 (partition 1)":1, |
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232 "EBF site 116 (partition 1)":1, |
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233 "EBF site 123 (partition 1)":1, |
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234 "EBF site 125 (partition 1)":0.9999823899944797, |
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235 "EBF site 126 (partition 1)":1, |
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236 "EBF site 128 (partition 1)":1, |
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237 "EBF site 133 (partition 1)":0.5654898147900533, |
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238 "EBF site 134 (partition 1)":1, |
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239 "EBF site 14 (partition 1)":1, |
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240 "EBF site 140 (partition 1)":1, |
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241 "EBF site 141 (partition 1)":1, |
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242 "EBF site 145 (partition 1)":1, |
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243 "EBF site 146 (partition 1)":1, |
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244 "EBF site 148 (partition 1)":1, |
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245 "EBF site 15 (partition 1)":1, |
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246 "EBF site 156 (partition 1)":1, |
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247 "EBF site 16 (partition 1)":1, |
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248 "EBF site 160 (partition 1)":1, |
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249 "EBF site 161 (partition 1)":1, |
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250 "EBF site 163 (partition 1)":1, |
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251 "EBF site 164 (partition 1)":1, |
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252 "EBF site 170 (partition 1)":1, |
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253 "EBF site 176 (partition 1)":1, |
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254 "EBF site 179 (partition 1)":1, |
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255 "EBF site 18 (partition 1)":1, |
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256 "EBF site 187 (partition 1)":1, |
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257 "EBF site 190 (partition 1)":1, |
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258 "EBF site 198 (partition 1)":1, |
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259 "EBF site 21 (partition 1)":1, |
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260 "EBF site 23 (partition 1)":1, |
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261 "EBF site 25 (partition 1)":1, |
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262 "EBF site 27 (partition 1)":1, |
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263 "EBF site 3 (partition 1)":1, |
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264 "EBF site 30 (partition 1)":1, |
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265 "EBF site 37 (partition 1)":1616.162948531769, |
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266 "EBF site 39 (partition 1)":1, |
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267 "EBF site 40 (partition 1)":1, |
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268 "EBF site 5 (partition 1)":1, |
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269 "EBF site 51 (partition 1)":0.9995339403671608, |
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270 "EBF site 63 (partition 1)":1, |
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271 "EBF site 67 (partition 1)":1, |
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272 "EBF site 70 (partition 1)":1, |
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273 "EBF site 73 (partition 1)":1, |
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274 "EBF site 74 (partition 1)":1, |
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275 "EBF site 76 (partition 1)":1, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
276 "EBF site 8 (partition 1)":1, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
277 "EBF site 81 (partition 1)":1, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
278 "EBF site 83 (partition 1)":1, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
279 "EBF site 85 (partition 1)":0.9998333727208876, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
280 "EBF site 88 (partition 1)":1, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
281 "EBF site 89 (partition 1)":1, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
282 "EBF site 9 (partition 1)":1, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
283 "EBF site 96 (partition 1)":0.9999780756681181, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
284 "EBF site 99 (partition 1)":1, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
285 "Global MG94xREV":0.001634413111541721, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
286 "Nucleotide GTR":0.001684521619549293 |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
287 }, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
288 "Node38":{ |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
289 "Global MG94xREV":0.001735516182878667, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
290 "Nucleotide GTR":0.00168484920326581 |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
291 }, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
292 "Node4":{ |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
293 "EBF site 101 (partition 1)":1, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
294 "EBF site 103 (partition 1)":1, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
295 "EBF site 116 (partition 1)":1, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
296 "EBF site 123 (partition 1)":1, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
297 "EBF site 125 (partition 1)":0.9999823935606595, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
298 "EBF site 126 (partition 1)":1, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
299 "EBF site 128 (partition 1)":1, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
300 "EBF site 133 (partition 1)":1e+26, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
301 "EBF site 134 (partition 1)":1, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
302 "EBF site 14 (partition 1)":1, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
303 "EBF site 140 (partition 1)":1, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
304 "EBF site 141 (partition 1)":1, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
305 "EBF site 145 (partition 1)":1, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
306 "EBF site 146 (partition 1)":1, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
307 "EBF site 148 (partition 1)":1, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
308 "EBF site 15 (partition 1)":1, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
309 "EBF site 156 (partition 1)":1, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
310 "EBF site 16 (partition 1)":1, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
311 "EBF site 160 (partition 1)":1, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
312 "EBF site 161 (partition 1)":1, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
313 "EBF site 163 (partition 1)":1, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
314 "EBF site 164 (partition 1)":1, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
315 "EBF site 170 (partition 1)":1, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
316 "EBF site 176 (partition 1)":1, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
317 "EBF site 179 (partition 1)":1, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
318 "EBF site 18 (partition 1)":1, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
319 "EBF site 187 (partition 1)":1, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
320 "EBF site 190 (partition 1)":1, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
321 "EBF site 198 (partition 1)":1, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
322 "EBF site 21 (partition 1)":1, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
323 "EBF site 23 (partition 1)":1, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
324 "EBF site 25 (partition 1)":1, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
325 "EBF site 27 (partition 1)":1, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
326 "EBF site 3 (partition 1)":1, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
327 "EBF site 30 (partition 1)":1, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
328 "EBF site 37 (partition 1)":0.5725438663972433, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
329 "EBF site 39 (partition 1)":1, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
330 "EBF site 40 (partition 1)":1, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
331 "EBF site 5 (partition 1)":1, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
332 "EBF site 51 (partition 1)":0.9995340347254161, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
333 "EBF site 63 (partition 1)":1, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
334 "EBF site 67 (partition 1)":1, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
335 "EBF site 70 (partition 1)":1, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
336 "EBF site 73 (partition 1)":1, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
337 "EBF site 74 (partition 1)":1, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
338 "EBF site 76 (partition 1)":1, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
339 "EBF site 8 (partition 1)":1, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
340 "EBF site 81 (partition 1)":1, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
341 "EBF site 83 (partition 1)":1, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
342 "EBF site 85 (partition 1)":0.9998334064611279, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
343 "EBF site 88 (partition 1)":1, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
344 "EBF site 89 (partition 1)":1, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
345 "EBF site 9 (partition 1)":1, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
346 "EBF site 96 (partition 1)":0.9999780801079843, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
347 "EBF site 99 (partition 1)":1, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
348 "Global MG94xREV":0.001634082124753167, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
349 "Nucleotide GTR":0.001683801387489096 |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
350 }, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
351 "REFERENCE":{ |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
352 "Global MG94xREV":0, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
353 "Nucleotide GTR":0, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
354 "original name":"REFERENCE" |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
355 }, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
356 "epi_isl_1181694_hCoV_19_USA_DE_DHSS_B1064373_2021":{ |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
357 "Global MG94xREV":0, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
358 "Nucleotide GTR":0, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
359 "original name":"epi_isl_1181694/hCoV-19/USA/DE-DHSS-B1064373/2021" |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
360 }, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
361 "epi_isl_1357692_hCoV_19_India_WB_1931500870015_2021":{ |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
362 "Global MG94xREV":0.001732287228161539, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
363 "Nucleotide GTR":0.001682745450340891, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
364 "original name":"epi_isl_1357692/hCoV-19/India/WB-1931500870015/2021" |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
365 }, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
366 "epi_isl_1384851_hCoV_19_India_MH_NCCS_ND13683_2021":{ |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
367 "Global MG94xREV":0, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
368 "Nucleotide GTR":0, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
369 "original name":"epi_isl_1384851/hCoV-19/India/MH-NCCS-ND13683/2021" |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
370 }, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
371 "epi_isl_1415270_hCoV_19_India_MH_NCCS_BJ2_2021":{ |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
372 "Global MG94xREV":0.001731614560044905, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
373 "Nucleotide GTR":0.00168274558227101, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
374 "original name":"epi_isl_1415270/hCoV-19/India/MH-NCCS-BJ2/2021" |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
375 }, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
376 "epi_isl_1416968_hCoV_19_Guadeloupe_IPP06229_2021":{ |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
377 "Global MG94xREV":0.001735723691511758, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
378 "Nucleotide GTR":0.001684401404203384, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
379 "original name":"epi_isl_1416968/hCoV-19/Guadeloupe/IPP06229/2021" |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
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|
380 }, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
381 "epi_isl_1533793_hCoV_19_India_MH_NCCS_CHN21027888_2021":{ |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
382 "Global MG94xREV":0.001732400226671219, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
383 "Nucleotide GTR":0.00168406792173386, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
384 "original name":"epi_isl_1533793/hCoV-19/India/MH-NCCS-CHN21027888/2021" |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
385 }, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
386 "epi_isl_1543980_hCoV_19_Singapore_490_2021":{ |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
387 "Global MG94xREV":0.001734572373969102, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
388 "Nucleotide GTR":0.001684975469042935, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
389 "original name":"epi_isl_1543980/hCoV-19/Singapore/490/2021" |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
390 }, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
391 "epi_isl_1544068_hCoV_19_India_MH_NCCS_RT231527_2021":{ |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
392 "Global MG94xREV":0.001735567214549057, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
393 "Nucleotide GTR":0.001684401583391051, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
394 "original name":"epi_isl_1544068/hCoV-19/India/MH-NCCS-RT231527/2021" |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
395 }, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
396 "epi_isl_1573247_hCoV_19_Germany_un_RKI_I_068985_2021":{ |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
397 "Global MG94xREV":0.001732287292348436, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
398 "Nucleotide GTR":0.001682745512695379, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
399 "original name":"epi_isl_1573247/hCoV-19/Germany/un-RKI-I-068985/2021" |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
400 }, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
401 "epi_isl_1589870_hCoV_19_India_WB_1931501009078_2021":{ |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
402 "Global MG94xREV":0, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
403 "Nucleotide GTR":0, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
404 "original name":"epi_isl_1589870/hCoV-19/India/WB-1931501009078/2021" |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
405 }, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
406 "epi_isl_1589885_hCoV_19_India_WB_1931300250528_2021":{ |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
407 "Global MG94xREV":0.001733756931612698, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
408 "Nucleotide GTR":0.001684431017860219, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
409 "original name":"epi_isl_1589885/hCoV-19/India/WB-1931300250528/2021" |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
410 }, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
411 "epi_isl_1592421_hCoV_19_USA_MA_CDC_STM_000044850_2021":{ |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
412 "Global MG94xREV":0.001733765374593157, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
413 "Nucleotide GTR":0.001684439221071522, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
414 "original name":"epi_isl_1592421/hCoV-19/USA/MA-CDC-STM-000044850/2021" |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
415 }, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
416 "epi_isl_1615709_hCoV_19_England_CAMC_14E792B_2021":{ |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
417 "Global MG94xREV":0, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
418 "Nucleotide GTR":0, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
419 "original name":"epi_isl_1615709/hCoV-19/England/CAMC-14E792B/2021" |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
420 }, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
421 "epi_isl_1632256_hCoV_19_England_RAND_14E1D70_2021":{ |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
422 "Global MG94xREV":0.001736016201075139, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
423 "Nucleotide GTR":0.00168443927661716, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
424 "original name":"epi_isl_1632256/hCoV-19/England/RAND-14E1D70/2021" |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
425 }, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
426 "epi_isl_1652105_hCoV_19_Singapore_561_2021":{ |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
427 "Global MG94xREV":0.001733699173848011, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
428 "Nucleotide GTR":0.001685171120971631, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
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|
429 "original name":"epi_isl_1652105/hCoV-19/Singapore/561/2021" |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
430 }, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
431 "epi_isl_1652118_hCoV_19_Singapore_575_2021":{ |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
432 "Global MG94xREV":0.001733317355190017, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
433 "Nucleotide GTR":0.001684401899924961, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
434 "original name":"epi_isl_1652118/hCoV-19/Singapore/575/2021" |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
435 }, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
436 "gb_LR757997_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_UNKNOWN_LR757997_Segment_null_Host_Human":{ |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
437 "Global MG94xREV":0.01050948250215542, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
438 "Nucleotide GTR":0.01020457779555702, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
439 "original name":"gb_LR757997_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_UNKNOWN_LR757997_Segment_null_Host_Human" |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
440 }, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
441 "gb_MT226610_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_CHN_KMS1_2020_Segment_null_Host_Human":{ |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
442 "Global MG94xREV":0.02683667582570331, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
443 "Nucleotide GTR":0.02592331511084145, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
444 "original name":"gb_MT226610_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_CHN_KMS1_2020_Segment_null_Host_Human" |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
445 }, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
446 "gb_MT326179_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_WA_UW_1572_2020_Segment_null_Host_Human":{ |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
447 "Global MG94xREV":0.005257318387802578, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
448 "Nucleotide GTR":0.005093980037543817, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
449 "original name":"gb_MT326179_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_WA_UW_1572_2020_Segment_null_Host_Human" |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
450 }, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
451 "gb_MT745751_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_BGD_DNAS_isl_BRB_2020_Segment_null_Host_Human":{ |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
452 "Global MG94xREV":0.003479916219393658, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
453 "Nucleotide GTR":0.003379296026417724, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
454 "original name":"gb_MT745751_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_BGD_DNAS_isl_BRB_2020_Segment_null_Host_Human" |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
455 }, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
456 "gb_MW154124_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_AUS_VIC7567_2020_Segment_null_Host_Human":{ |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
457 "Global MG94xREV":0.003464849068174243, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
458 "Nucleotide GTR":0.003372774424630234, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
459 "original name":"gb_MW154124_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_AUS_VIC7567_2020_Segment_null_Host_Human" |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
460 }, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
461 "gb_MW345265_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_MD_MDH_0448_2020_Segment_null_Host_Human":{ |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
462 "Global MG94xREV":0.003473329349813396, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
463 "Nucleotide GTR":0.003374190595560375, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
464 "original name":"gb_MW345265_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_MD_MDH_0448_2020_Segment_null_Host_Human" |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
465 }, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
466 "gb_MW486334_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_WI_UW_2535_2020_Segment_null_Host_Human":{ |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
467 "Global MG94xREV":0.00521423750951572, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
468 "Nucleotide GTR":0.00505933790460295, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
469 "original name":"gb_MW486334_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_WI_UW_2535_2020_Segment_null_Host_Human" |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
470 }, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
471 "gb_MW523870_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_LA_CDC_STM_A100279_2021_Segment_null_Host_Human":{ |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
472 "Global MG94xREV":0.003464011563798612, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
473 "Nucleotide GTR":0.003373764235314068, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
474 "original name":"gb_MW523870_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_LA_CDC_STM_A100279_2021_Segment_null_Host_Human" |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
475 }, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
476 "gb_MW525063_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_MI_CDC_STM_0000013_D10_2021_Segment_null_Host_Human":{ |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
477 "Global MG94xREV":0.005236219930619085, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
478 "Nucleotide GTR":0.005068409188375663, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
479 "original name":"gb_MW525063_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_MI_CDC_STM_0000013_D10_2021_Segment_null_Host_Human" |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
480 }, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
481 "gb_MW540189_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_MA_MASPHL_01215_2020_Segment_null_Host_Human":{ |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
482 "Global MG94xREV":0.003464842725215135, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
483 "Nucleotide GTR":0.003372774424770855, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
484 "original name":"gb_MW540189_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_MA_MASPHL_01215_2020_Segment_null_Host_Human" |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
485 }, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
486 "gb_MW562702_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_UT_UPHL_2102128070_2020_Segment_null_Host_Human":{ |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
487 "Global MG94xREV":0.001735902731024219, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
488 "Nucleotide GTR":0.001686266012390882, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
489 "original name":"gb_MW562702_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_UT_UPHL_2102128070_2020_Segment_null_Host_Human" |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
490 }, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
491 "gb_MW583322_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_AL_CDC_STM_000001665_2021_Segment_null_Host_Human":{ |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
492 "Global MG94xREV":0.00348009744950267, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
493 "Nucleotide GTR":0.003374436490976879, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
494 "original name":"gb_MW583322_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_AL_CDC_STM_000001665_2021_Segment_null_Host_Human" |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
495 }, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
496 "gb_MW585851_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_GA_CDC_STM_000004152_2021_Segment_null_Host_Human":{ |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
497 "Global MG94xREV":0.003472571050955705, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
498 "Nucleotide GTR":0.003376034743011948, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
499 "original name":"gb_MW585851_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_GA_CDC_STM_000004152_2021_Segment_null_Host_Human" |
1c3a2f66373f
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500 }, |
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diff
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501 "gb_MW585867_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CA_CDC_STM_000003621_2021_Segment_null_Host_Human":{ |
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502 "Global MG94xREV":0.003474988467202712, |
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503 "Nucleotide GTR":0.003374190741831846, |
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diff
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504 "original name":"gb_MW585867_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CA_CDC_STM_000003621_2021_Segment_null_Host_Human" |
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506 "gb_MW593074_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_MN_MDH_2645_2021_Segment_null_Host_Human":{ |
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507 "Global MG94xREV":0.003471294884078775, |
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508 "Nucleotide GTR":0.003376937492543959, |
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diff
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509 "original name":"gb_MW593074_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_MN_MDH_2645_2021_Segment_null_Host_Human" |
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510 } |
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512 "attributes":{ |
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527 "display order":200 |
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539 "display order":200 |
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559 "display order":200 |
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668 }, |
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679 "display order":200 |
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681 "EBF site 70 (partition 1)":{ |
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683 "display order":200 |
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684 }, |
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687 "display order":200 |
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691 "display order":200 |
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692 }, |
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694 "attribute type":"branch label", |
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695 "display order":200 |
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696 }, |
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699 "display order":200 |
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700 }, |
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703 "display order":200 |
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704 }, |
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705 "EBF site 83 (partition 1)":{ |
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707 "display order":200 |
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708 }, |
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709 "EBF site 85 (partition 1)":{ |
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711 "display order":200 |
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712 }, |
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713 "EBF site 88 (partition 1)":{ |
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714 "attribute type":"branch label", |
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715 "display order":200 |
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716 }, |
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717 "EBF site 89 (partition 1)":{ |
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718 "attribute type":"branch label", |
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changeset
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719 "display order":200 |
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720 }, |
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721 "EBF site 9 (partition 1)":{ |
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722 "attribute type":"branch label", |
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changeset
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723 "display order":200 |
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724 }, |
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725 "EBF site 96 (partition 1)":{ |
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726 "attribute type":"branch label", |
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changeset
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727 "display order":200 |
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728 }, |
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729 "EBF site 99 (partition 1)":{ |
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730 "attribute type":"branch label", |
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changeset
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731 "display order":200 |
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changeset
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732 }, |
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733 "Global MG94xREV":{ |
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734 "attribute type":"branch length", |
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changeset
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735 "display order":1 |
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736 }, |
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changeset
|
737 "Nucleotide GTR":{ |
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|
738 "attribute type":"branch length", |
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changeset
|
739 "display order":0 |
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changeset
|
740 }, |
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iuc
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changeset
|
741 "original name":{ |
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changeset
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742 "attribute type":"node label", |
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changeset
|
743 "display order":-1 |
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changeset
|
744 } |
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changeset
|
745 } |
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746 }, |
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changeset
|
747 "data partitions":{ |
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changeset
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748 "0":{ |
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changeset
|
749 "coverage": [ |
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iuc
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1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
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|
751 ], |
1c3a2f66373f
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iuc
parents:
diff
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|
752 "name":"meme.filter.default" |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
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|
753 } |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
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|
754 }, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
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755 "fits":{ |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
756 "Global MG94xREV":{ |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
757 "AIC-c":2512.962001126494, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
758 "Equilibrium frequencies": [ |
1c3a2f66373f
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iuc
parents:
diff
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|
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diff
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diff
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diff
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diff
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diff
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772 [0.01016412464618009], |
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diff
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diff
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diff
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diff
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changeset
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changeset
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changeset
|
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changeset
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changeset
|
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changeset
|
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changeset
|
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changeset
|
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changeset
|
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changeset
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changeset
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801 [0.0060540580187001], |
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changeset
|
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1c3a2f66373f
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changeset
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diff
changeset
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changeset
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changeset
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changeset
|
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diff
changeset
|
808 [0.03199221880690793], |
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changeset
|
809 [0.01801483181642438], |
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changeset
|
810 [0.006455230577911434], |
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diff
changeset
|
811 [0.01122180073845716], |
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changeset
|
812 [0.02433965804833868], |
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changeset
|
813 [0.002295465694104339], |
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changeset
|
814 [0.003990447484454917], |
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changeset
|
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changeset
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816 [0.01755532734880559], |
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changeset
|
817 [0.00629057695692368], |
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changeset
|
818 [0.01093556617204019], |
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iuc
parents:
diff
changeset
|
819 [0.02371882618448924] |
1c3a2f66373f
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iuc
parents:
diff
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|
820 ], |
1c3a2f66373f
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iuc
parents:
diff
changeset
|
821 "Log Likelihood":-1205.058976374832, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
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|
822 "Rate Distributions":{ |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
823 "non-synonymous/synonymous rate ratio for *background*": [ |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
824 [0.4929148115209321, 1] |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
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|
825 ], |
1c3a2f66373f
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iuc
parents:
diff
changeset
|
826 "non-synonymous/synonymous rate ratio for *test*": [ |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
827 [24.31954771499909, 1] |
1c3a2f66373f
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iuc
parents:
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|
828 ] |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
829 }, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
830 "display order":1, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
831 "estimated parameters":51 |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
832 }, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
833 "Nucleotide GTR":{ |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
834 "AIC-c":2633.0046471406, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
835 "Equilibrium frequencies": [ |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
836 [0.3251262626262627], |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
837 [0.1799242424242424], |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
838 [0.2026515151515151], |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
839 [0.2922979797979798] |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
840 ], |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
841 "Log Likelihood":-1247.247280799152, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
842 "Rate Distributions":{ |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
843 "Substitution rate from nucleotide A to nucleotide C":0, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
844 "Substitution rate from nucleotide A to nucleotide G":1, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
845 "Substitution rate from nucleotide A to nucleotide T":0.3101631549852981, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
846 "Substitution rate from nucleotide C to nucleotide G":1.129990583516242, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
847 "Substitution rate from nucleotide C to nucleotide T":2.723444388603395, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
848 "Substitution rate from nucleotide G to nucleotide T":1.720896006888861 |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
849 }, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
850 "display order":0, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
851 "estimated parameters":69 |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
852 } |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
853 }, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
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|
854 "input":{ |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
855 "file name":"/home/aglucaci/SARS-CoV-2/clades/B-1-617/nsp8.combined.fas", |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
856 "number of sequences":32, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
857 "number of sites":198, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
858 "partition count":1, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
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|
859 "trees":{ |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
860 "0":"(REFERENCE,(gb_MT226610_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_CHN_KMS1_2020_Segment_null_Host_Human,epi_isl_1589870_hCoV_19_India_WB_1931501009078_2021)Node20,gb_MT326179_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_WA_UW_1572_2020_Segment_null_Host_Human,epi_isl_1589885_hCoV_19_India_WB_1931300250528_2021,(epi_isl_1615709_hCoV_19_England_CAMC_14E792B_2021,gb_MW523870_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_LA_CDC_STM_A100279_2021_Segment_null_Host_Human)Node4,epi_isl_1592421_hCoV_19_USA_MA_CDC_STM_000044850_2021,gb_MW345265_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_MD_MDH_0448_2020_Segment_null_Host_Human,gb_MW525063_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_MI_CDC_STM_0000013_D10_2021_Segment_null_Host_Human,epi_isl_1181694_hCoV_19_USA_DE_DHSS_B1064373_2021,gb_MW585851_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_GA_CDC_STM_000004152_2021_Segment_null_Host_Human,(gb_MW583322_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_AL_CDC_STM_000001665_2021_Segment_null_Host_Human,gb_MW562702_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_UT_UPHL_2102128070_2020_Segment_null_Host_Human,epi_isl_1384851_hCoV_19_India_MH_NCCS_ND13683_2021)Node38,epi_isl_1357692_hCoV_19_India_WB_1931500870015_2021,gb_MW486334_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_WI_UW_2535_2020_Segment_null_Host_Human,epi_isl_1533793_hCoV_19_India_MH_NCCS_CHN21027888_2021,gb_LR757997_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_UNKNOWN_LR757997_Segment_null_Host_Human,epi_isl_1415270_hCoV_19_India_MH_NCCS_BJ2_2021,epi_isl_1543980_hCoV_19_Singapore_490_2021,epi_isl_1632256_hCoV_19_England_RAND_14E1D70_2021,gb_MT745751_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_BGD_DNAS_isl_BRB_2020_Segment_null_Host_Human,epi_isl_1573247_hCoV_19_Germany_un_RKI_I_068985_2021,gb_MW585867_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CA_CDC_STM_000003621_2021_Segment_null_Host_Human,gb_MW540189_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_MA_MASPHL_01215_2020_Segment_null_Host_Human,epi_isl_1652118_hCoV_19_Singapore_575_2021,epi_isl_1652105_hCoV_19_Singapore_561_2021,gb_MW593074_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_MN_MDH_2645_2021_Segment_null_Host_Human,gb_MW154124_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_AUS_VIC7567_2020_Segment_null_Host_Human,epi_isl_1416968_hCoV_19_Guadeloupe_IPP06229_2021,epi_isl_1544068_hCoV_19_India_MH_NCCS_RT231527_2021)" |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
861 } |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
862 }, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
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|
863 "tested":{ |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
864 "0":{ |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
865 "Node20":"test", |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
866 "Node38":"background", |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
867 "Node4":"test", |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
868 "REFERENCE":"background", |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
869 "epi_isl_1181694_hCoV_19_USA_DE_DHSS_B1064373_2021":"background", |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
870 "epi_isl_1357692_hCoV_19_India_WB_1931500870015_2021":"background", |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
871 "epi_isl_1384851_hCoV_19_India_MH_NCCS_ND13683_2021":"background", |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
872 "epi_isl_1415270_hCoV_19_India_MH_NCCS_BJ2_2021":"background", |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
873 "epi_isl_1416968_hCoV_19_Guadeloupe_IPP06229_2021":"background", |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
874 "epi_isl_1533793_hCoV_19_India_MH_NCCS_CHN21027888_2021":"background", |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
875 "epi_isl_1543980_hCoV_19_Singapore_490_2021":"background", |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
876 "epi_isl_1544068_hCoV_19_India_MH_NCCS_RT231527_2021":"background", |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
877 "epi_isl_1573247_hCoV_19_Germany_un_RKI_I_068985_2021":"background", |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
878 "epi_isl_1589870_hCoV_19_India_WB_1931501009078_2021":"background", |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
879 "epi_isl_1589885_hCoV_19_India_WB_1931300250528_2021":"background", |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
880 "epi_isl_1592421_hCoV_19_USA_MA_CDC_STM_000044850_2021":"background", |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
881 "epi_isl_1615709_hCoV_19_England_CAMC_14E792B_2021":"background", |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
882 "epi_isl_1632256_hCoV_19_England_RAND_14E1D70_2021":"background", |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
883 "epi_isl_1652105_hCoV_19_Singapore_561_2021":"background", |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
884 "epi_isl_1652118_hCoV_19_Singapore_575_2021":"background", |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
885 "gb_LR757997_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_UNKNOWN_LR757997_Segment_null_Host_Human":"background", |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
886 "gb_MT226610_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_CHN_KMS1_2020_Segment_null_Host_Human":"background", |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
887 "gb_MT326179_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_WA_UW_1572_2020_Segment_null_Host_Human":"background", |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
888 "gb_MT745751_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_BGD_DNAS_isl_BRB_2020_Segment_null_Host_Human":"background", |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
889 "gb_MW154124_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_AUS_VIC7567_2020_Segment_null_Host_Human":"background", |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
890 "gb_MW345265_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_MD_MDH_0448_2020_Segment_null_Host_Human":"background", |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
891 "gb_MW486334_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_WI_UW_2535_2020_Segment_null_Host_Human":"background", |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
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892 "gb_MW523870_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_LA_CDC_STM_A100279_2021_Segment_null_Host_Human":"background", |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
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|
893 "gb_MW525063_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_MI_CDC_STM_0000013_D10_2021_Segment_null_Host_Human":"background", |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
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894 "gb_MW540189_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_MA_MASPHL_01215_2020_Segment_null_Host_Human":"background", |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
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895 "gb_MW562702_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_UT_UPHL_2102128070_2020_Segment_null_Host_Human":"background", |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
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896 "gb_MW583322_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_AL_CDC_STM_000001665_2021_Segment_null_Host_Human":"background", |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
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897 "gb_MW585851_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_GA_CDC_STM_000004152_2021_Segment_null_Host_Human":"background", |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
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898 "gb_MW585867_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CA_CDC_STM_000003621_2021_Segment_null_Host_Human":"background", |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
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|
899 "gb_MW593074_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_MN_MDH_2645_2021_Segment_null_Host_Human":"background" |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
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|
900 } |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
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|
901 }, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
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|
902 "timers":{ |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
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|
903 "MEME analysis":{ |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
904 "order":2, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
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|
905 "timer":5 |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
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|
906 }, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
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|
907 "Model fitting":{ |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
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|
908 "order":1, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
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|
909 "timer":5 |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
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|
910 }, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
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911 "Total time":{ |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
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|
912 "order":0, |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
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|
913 "timer":10 |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
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|
914 } |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
changeset
|
915 } |
1c3a2f66373f
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
iuc
parents:
diff
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|
916 } |