# HG changeset patch
# User iuc
# Date 1633410715 0
# Node ID a8ea0db2c606a7cbb476281466cb2ab658770905
# Parent  194108d6da227f6f6e3fdf9e31b569fc4bc4d370
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 9ef881c2d3d5f240cbff33667b55f72cb82d9896"

diff -r 194108d6da22 -r a8ea0db2c606 hyphy_bgm.xml
--- a/hyphy_bgm.xml	Sat Jul 03 08:57:30 2021 +0000
+++ b/hyphy_bgm.xml	Tue Oct 05 05:11:55 2021 +0000
@@ -1,6 +1,7 @@
 <?xml version="1.0"?>
 <tool id="hyphy_bgm" name="HyPhy-BGM" version="@VERSION@+galaxy2" profile="19.09">
     <description>- Detecting coevolving sites via Bayesian graphical models</description>
+    <expand macro="bio_tools"/>
     <macros>
         <import>macros.xml</import>
     </macros>
diff -r 194108d6da22 -r a8ea0db2c606 macros.xml
--- a/macros.xml	Sat Jul 03 08:57:30 2021 +0000
+++ b/macros.xml	Tue Oct 05 05:11:55 2021 +0000
@@ -4,6 +4,11 @@
 	    <param name="input_file" type="data" format="fasta,fasta.gz,nex" label="Input FASTA or NEXUS file" help="If the input file type is NEXUS and it includes a valid newick tree, that tree will override an uploaded newick tree" />
         <param name="input_nhx" type="data" format="nhx,newick" optional="true" label="Input newick file"/>
     </xml>
+    <xml name="bio_tools">
+        <xrefs>
+            <xref type="bio.tools">HyPhy</xref>
+        </xrefs>
+    </xml>
     <xml name="substitution">
         <param name="model" type="select" label="Substitution model">
             <option value="GTR">GTR - General time reversible