Mercurial > repos > iuc > hyphy_conv
diff hyphy_conv.xml @ 1:c1d24ff838c8 draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit e22821f51ae326b3696a9456cbc44f9982512a52"
author | iuc |
---|---|
date | Tue, 20 Apr 2021 19:55:16 +0000 |
parents | 9ce3d6d4bd0e |
children | f6e7b5955712 |
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--- a/hyphy_conv.xml Tue Apr 20 10:31:50 2021 +0000 +++ b/hyphy_conv.xml Tue Apr 20 19:55:16 2021 +0000 @@ -1,5 +1,5 @@ <?xml version="1.0"?> -<tool id="hyphy_conv" name="HyPhy-Conv" version="@VERSION@+galaxy0" profile="19.09"> +<tool id="hyphy_conv" name="HyPhy-Conv" version="@VERSION@+galaxy1" profile="19.09"> <description>translate an in-frame codon alignment to proteins</description> <macros> <import>macros.xml</import> @@ -11,7 +11,7 @@ '$gencodeid' '$deletions' conv_input.fa - aa.nhx + aa.nex > ./conv.log @ERRORS@ ]]></command> @@ -25,13 +25,13 @@ <data name="conv_log" format="txt" from_work_dir="conv.log"> <filter>save_log</filter> </data> - <data name="proteins" format="nhx" from_work_dir="aa.nhx" /> + <data name="proteins" format="nex" from_work_dir="aa.nex" /> </outputs> <tests> <test> <param name="input_file" ftype="fasta" value="conv-in1.fa"/> <param name="deletions" value="Keep Deletions" /> - <output name="proteins" file="conv-out1.nhx" /> + <output name="proteins" file="conv-out1.nex" /> </test> </tests> <help><![CDATA[