# HG changeset patch
# User iuc
# Date 1677770138 0
# Node ID ec783806a5c3299559531c1caffac5dcf9b52040
# Parent  b110a31a9c618bc5ae6aef491e4712c4d02f17d4
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit e7a89841d59689e87db592e112f9c8fb5331d954

diff -r b110a31a9c61 -r ec783806a5c3 hyphy_fel.xml
--- a/hyphy_fel.xml	Thu Aug 18 13:53:29 2022 +0000
+++ b/hyphy_fel.xml	Thu Mar 02 15:15:38 2023 +0000
@@ -1,5 +1,4 @@
-<?xml version="1.0"?>
-<tool id="hyphy_fel" name="HyPhy-FEL" version="@TOOL_VERSION@+galaxy1" profile="19.09">
+<tool id="hyphy_fel" name="HyPhy-FEL" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" profile="@PROFILE@">
     <description>Fixed Effects Likelihood</description>
     <macros>
         <import>macros.xml</import>
@@ -25,7 +24,7 @@
         <expand macro="inputs"/>
         <expand macro="gencode"/>
         <expand macro="branches"/>
-        <param name="p_value" type="float" value=".1" min="0" max="1" label="P-value"/>
+        <param argument="--pvalue" name="p_value" type="float" value=".1" min="0" max="1" label="P-value"/>
         <param name="include_srv" type="select" label="Include synonymous rate variation" help = "Allow synonymous rates to vary from site to site">
             <option value="Yes">Yes (recommended)</option>
             <option value="No">No</option>
diff -r b110a31a9c61 -r ec783806a5c3 macros.xml
--- a/macros.xml	Thu Aug 18 13:53:29 2022 +0000
+++ b/macros.xml	Thu Mar 02 15:15:38 2023 +0000
@@ -1,6 +1,9 @@
 <?xml version="1.0"?>
 <macros>
-    <token name="@TOOL_VERSION@">2.5.36</token>
+    <token name="@TOOL_VERSION@">2.5.47</token>
+    <token name="@VERSION_SUFFIX@">0</token>
+    <token name="@PROFILE@">21.05</token>
+
     <xml name="inputs">
 	    <param name="input_file" type="data" format="fasta,fasta.gz,nex" label="Input FASTA or NEXUS file" help="If the input file type is NEXUS and it includes a valid newick tree, that tree will override an uploaded newick tree" />
         <param name="input_nhx" type="data" format="nhx,newick" optional="true" label="Input newick file"/>
@@ -10,8 +13,8 @@
             <xref type="bio.tools">HyPhy</xref>
         </xrefs>
     </xml>
-    <xml name="substitution">
-        <param name="model" type="select" label="Substitution model">
+    <xml name="substitution" tokens="argument">
+        <param argument="@ARGUMENT@" type="select" label="Substitution model">
             <option value="GTR">GTR - General time reversible
             model</option>
             <option value="LG">LG - Generalist empirical model from
@@ -66,13 +69,13 @@
 
     <xml name="mcmc_options">
         <param argument="--chains" type="integer" value="5" min="2" max="20" label="Number of MCMC chains" />
-        <param argument="--chain-length" name="chain_length" type="integer" value="2000000" min="500000" max="50000000" label="Length of each chain" />
+        <param argument="--chain-length" type="integer" value="2000000" min="500000" max="50000000" label="Length of each chain" />
         <param argument="--burn-in" name="samples" type="integer" value="1000000" min="100000" max="1900000" label="Samples to use for burn-in" />
         <param argument="--samples" name="samples_per_chain" type="integer" value="100" min="50" max="1000000" label="Samples to draw from each chain" />
     </xml>
 
     <xml name="gencode">
-        <param name="gencodeid" type="select" label="Genetic code">
+        <param argument="--code" name="gencodeid" type="select" label="Genetic code">
             <option value="Universal">Universal code</option>
             <option value="Vertebrate-mtDNA">Vertebrate mitochondrial DNA
             code</option>
@@ -119,7 +122,7 @@
 
     <xml name="branches">
         <conditional name="branch_cond">
-            <param name="branch_sel" type="select" label="Set of branches to test">
+            <param argument="--branches" name="branch_sel" type="select" label="Set of branches to test">
                 <option value="All">All branches</option>
                 <option value="Internal">Internal branches</option>
                 <option value="Leaves">Leaf branches</option>
@@ -152,7 +155,7 @@
         </requirements>
     </xml>
     <xml name="alternative_model_output">
-        <data name="alternative_model" format="hyphy_results.json" from_work_dir="alternative_model.json">
+        <data name="alternative_model" format="nhx" from_work_dir="alternative_model.nhx" label="${tool.name} on ${on_string}: Alternative model">
             <filter>advanced['save_alternative_model']</filter>
         </data>
     </xml>
@@ -188,7 +191,7 @@
             --rates $advanced.rates
             --srv $advanced.srv
             #if $advanced.save_alternative_model:
-                --save-fit alternative_model.json
+                --save-fit alternative_model.nhx
             #end if
         #end if
     ]]></token>
diff -r b110a31a9c61 -r ec783806a5c3 test-data/absrel-in1.fa
--- a/test-data/absrel-in1.fa	Thu Aug 18 13:53:29 2022 +0000
+++ b/test-data/absrel-in1.fa	Thu Mar 02 15:15:38 2023 +0000
@@ -1,20 +1,8 @@
->Human
-AAAGAGATTACGAATGCCTTGGAAACCTGGGGTGCCTTGGGTCAGGACATCAACTTGGACATTCCTAGTTTTCAAATGAGTGATGATATTGACGATATAAAATGGGAAAAAACTTCAGACAAGAAAAAGATTGCACAATTCAGAAAAGAGAAAGAGACTTTCAAGGAAAAAGATACATATAAGCTATTTAAAAATGGAACTCTGAAAATTAAGCAT---CTGAAGACCGATGATCAGGATATCTACAAGGTATCAATATATGATACAAAAGGAAAAAATGTGTTGGAAAAAATATTTGATTTGAAGATTCAAGAGAGGGTCTCAAAACCAAAGATCTCCTGGACTTGTATCAACACAACCCTGACCTGTGAGGTAATGAATGGAACTGACCCCGAATTAAACCTGTATCAAGATGGGAAACATCTAAAA---CTTTCTCAGAGGGTCATCACACACAAGTGGACCACCAGCCTGAGTGCAAAATTCAAGTGCACAGCAGGGAACAAAGTCAGCAAGGAATCCAGTGTCGAGCCTGTCAGCTGTCCAGAGAAAGGTCTGGAC
->Chimp
-GAAGAGATTACGAATGCCTTGGAAACCTGGGGTGCCTTGGGTCAGGACATCAACTTGGACATTCCTAGTTTTCAAATGAGTGATGATATTGACGATATAAAATGGGAAAAAACTTCAGACAAGAAAAAGATTGCACAATTCAGAAAAGAGAAAGAGACTTTCAAGGAAAAAGATACATATAAGCTATTTAAAAATGGAACTCTGAAAATTAAGCAT---CTGAAGACCGATGATCAGGATATCTACAAGGTATCAATATATGATACAAAAGGAAAAAATGTGTTGGAAAAAATATTTGATTTGAAGATTCAAGAGAGGGTCTCAAAACCAAAGATCTCCTGGACTTGTATCAACACAACCCTGACCTGTGAGGTAATGAATGGAACTGACCCCGAATTAAACCTGTATCAAGATGGGAAACATCTAAAA---CTTTCTCAGAGGGTCATCACACACAAGTGGACCACCAGCCTGAGTGCAAAATTCAAGTGCACAGCAGGGAACAAAGTCAGCAAGGAATCCAGTGTCGAGCCTGTCAGCTGTCCAGAGAAAGGTCTGGAC
 >Baboon
 AAAGAGATTAGGAATGCTTTGGAAACCTGGGGAGCGCTGGGTCAGGACATCGACTTGGACATTCCTAGTTTTCAAATGAGTGATGATATTGATGATATAAAATGGGAGAAAACTTCAGACAAGAAAAAGATTGCACAATTCAGAAAAGAGAAGGAGACTTTCGAGGAAAAAGATGCATATAAGCTATTTAAAAACGGAACTCTGAAAATTAAGCAT---CTGAAGATCCATGATCAGGATAGCTACAAGGTATCAATATACGATACAAAAGGAAAAAATGTGTTGGAAAAAACATTTGATTTGAAGATTCAAGAGAGGGTCTCAGAACCAAAGATCTCCTGGACTTGTATCAACACAACCCTGACCTGTGAAGTAATGAATGGAACTGACCCCGAATTAAACCTGTATCAAGATGGGAAACATCTAAAA---CTTTCTCAGAGGGTCATCACACACAAGTGGACCACCAGCCTGAGTGCGAAATTCAAGTGCACAGCAGGGAACAAAGTCAGCAAGGAATCCAGGATGGAGACTGTCAGCTGTCCAGAGAAAGGTCTGGAC
->RhMonkey
-AAAGAGATTAGGAATGCTTTGGAAACCTGGGGAGCGCTGGGTCAGGACATCGACTTGGACATTCCTAGTTTTCAAATGAGTGATGATATTGATGATATAAGATGGGAAAAAACTTCAGACAAGAAAAAGATTGCACAATTCAGAAAAGAGAAGGAGACTTTCGAGGAAAAAGATGCATATAAGCTATTTAAAAACGGAACTCTGAAAAYTAAGCAT---CTGAAGATCCATGATCAGGATAGCTACAAGGTATCAATATACGATACAAAAGGAAAAAATGTGTTGGAAAAAACATTTGATTTGAAGATTCAAGAGAGGGTCTCAGAACCAAAGATCTCCTGGACTTGTATCAACACAACCCTGACCTGTGAAGTAATGAATGGAACTGRCCCCGAATTAAACCTGTATCAAGATGGGAAACATGTAAAA---CTTTCTCAGAGGGTCATCACACACAAGTGGACCACCAGCCTGAGTGCGAAATTCAAGTGCACAGCAGGGAACAAAGTCAGCAAGGAATCCAGGATGGAGACTGTCAGCTGTCCAGAGAAAGGTCTGGAC
 >Cow
 ------------GAAAGCATTGTCGTCTGGGGTGCCCTGGATCATGACCTCAACCTGGACATTCCTGGTTTTCCAAGAAGTGATATAGTGGCAGATATAAAATGGAACAGA------AACAAAAACAAGATTGCACGAATAAAGAAAGATATGCCACTTCACAATGAAATGGACAAATATGATATGTTTACAAATGGAACTCTGAAAATTAAAACT---CTGATGAGAAACGATAGTGGTCTCTATGAGGTAGAGGTTTATGATTCAAATGGAGTAAACCTACTGAGCAAAAAATTTGATTTGAAGATTCAAGAGATGCTCTCAGGACCTGAAATTAACTGGATCTGTACCAACAGAACTGTGAGCTGCAAGGTAGAAAATGGAAGTAATCCTAAATTACAACTGTTTTTAAATACGACCCGTGTCAAACAAGATCATGGGAAGCTCATCACCTACACGTGGAACACCAGATGGAATAAAACATTCAAGTGCGTGGCGAGTAACCATGTCGATAGCAAAGTCAGCATAGAGATCGCCGTGTGTCCAGATGAAGGTCTGGAT
 >Pig
 ---------------ACTGAGGTTGTCTGGGGCATCGTGGATCAAGACATCAACCTGGACATTCCTGAACTTTCAAAACATGATAACGTAGATCATATACGATGGCAGAAG------AATGAAAACAAGATCGCAGAATTTAAAAAAAACAAAGAAACTCACCCTGTGAAAGACACATACATGATGTTACCAAATGGAACTCTGAGAATTAAAGAT---CTGAAGAGAGATGATGAGGGTATCTACAAGGTAACTGTCTATGCTACGGATGGAAAACACATGCTGGAGAGAAAATTTGATTTGCCGATTCTAGATGGGGTCTCAAAACCTGTAATCTCCTGGAGCTGTGCCGACAAAACGGTGACCTGTGAGGTAGCAGAAGGAAGTGACCCTAAGTTAAAACTGTATGTAAATAAGTCCACTGCCAGAGAAGGTCGTCAGAAGGTCATCCTGTGGAAGTGGAACACCAAATGGAGCACATTATTCAAGTGTGTGGCCAGTAACAACGCCAGTGAGCAAATCAGCATGGTGACCATCAGTTGTACGGGGCAAGGTCTGGAT
->Horse
-------------AAGAATATCACCATCTTGGGTGCCCTGGAACGTGATATCAACCTGGACATTCCTGCTTTTCAAATGAGTGAGCATGTAGAAGATATACAATGGAGCAAA------GGAAAAACCAAGATTGCAAAATTCAAAAATGGCAGTATGACTTTCCAGAAAGATAAAACATACGAGGTATTAAAAAATGGAACTCTGAAAATTAAACAT---CTGGAGAGAATTCATGAAGGTACCTACAAGGTAGACGCATATGATAGTGATGGAAAAAATGTGTTGGAGGAAACATTTCATTTGAGCCTTCTAGAGATGGTCTCAAAACCTAATATCTCCTGGAGCTGCACCAACACCACCCTGACCTGCGAGGTGACAAAAGGAACTGACTTTGAGTTAAAACTCTATCTAAATGGGAGAATGATCCAAAAAAGTCCTCGCAAAGTCATCGTATACAAGCGGGCCAGCAACCAAATTGCGTCCTTCAAGTGCACAGCCAATAACACAGTCAGCGAGGAAAGCAGCTCTGTGGTCATCAGGTGTACAGAGAAAGGTCTGGAT
->Cat
----------GCAAATGATGATATCGTCTGGGGTACCCTGGGTCAGGACATCAACCTGGACATTCCTGATTCTCAA---GGGATTAATATAGATGATATACACTGGGAAAAA------GGCAAGAAGAAGGTGGCGAGGTTCCAAATTAGCAACAAGCCTAAGAATCCAGATGAAAAATATAATGTGTCAATGAATGGAACTCTGAAAATTAAACAT---CTGATGCTAGAAGACTGCGATACCTACAAGGTTGTTATATACGATAAGGATGGAAAGAATGTGTTGGATAAAACATTTCAGCTGAAGATTCAAGAGAAGGTCTCAACGCCTAACATCGACTGGAATTGTATCAACAAAACCCTGGTCTGTAAGGTATCAAATGGAACAGACCCTGAATTAAAACTGTACGTAAATGGGACCAGTATCAAGCCCGTTTCTTCGAAGTTCAGCACATACAGGTTTATAAACAAGCAGAAGATATTAGTCAACTGCACGGCAGAAAACAAAGTCAGCAAGGAAAGCGACGTGAAGATGATCACTTGTTCAGAGAAGGGTCTGGAC
->Mouse
----------AGAGACAATGAGACCATCTGGGGTGTCTTGGGTCATGGCATCACCCTGAACATCCCCAACTTTCAAATGACTGATGATATTGATGAGGTGCGATGGGTAAGG------AGGGGCACCCTGGTCGCAGAGTTTAAAAGGAAGAAGCCACCTTTTTTGATATCAGAAACGTATGAGGTCTTAGCAAACGGATCCCTGAAGATAAAGAAGCCGATGATGAGAAACGACAGTGGCACCTATAATGTAATGGTGTATGGCACAAATGGGATGACTAGGCTGGAGAAGGACCTGGACGTGAGGATTCTGGAGAGGGTCTCAAAGCCCATGATCCACTGGGAATGCCCCAACACAACCCTGACCTGTGCGGTCTTGCAAGGGACAGATTTTGAACTGAAGCTGTATCAAGGGGAAACACTACTCAATAGTCTCCCCCAGAAGAACATGAGTTACCAGTGG---ACCAACCTGAACGCACCATTCAAGTGTGAGGCGATAAACCCGGTCAGCAAGGAGTCTAAGATGGAAGTTGTTAACTGTCCAGAGAAAGGTCTGTCC
 >Rat
 ---------AGAGACAGTGGGACCGTCTGGGGTGCCCTGGGTCATGGCATCAACCTGAACATCCCTAACTTTCAAATGACTGATGATATTGATGAGGTGCGATGGGAGAGG------GGGAGCACCCTGGTTGCCGAGTTTAAAAGGAAGATGAAGCCTTTTTTGAAATCGGGAGCATTTGAGATCTTAGCAAATGGAGACTTGAAGATAAAGAAT---CTGACAAGAGATGACAGTGGCACCTATAATGTAACGGTATACAGCACAAATGGGACACGTATCCTGGACAAGGCACTGGACTTGAGGATTCTAGAGATGGTCTCAAAGCCGATGATCTACTGGGAGTGCAGCAACGCAACCCTGACCTGTGAGGTCTTGGAAGGAACAGATGTTGAACTAAAGCTGTACCAAGGAAAGGAGCATCTCAGGAGCCTCCGTCAGAAGACCATGAGTTACCAGTGG---ACCAACCTGAGAGCACCGTTTAAGTGCAAGGCGGTAAACAGGGTCAGCCAGGAGTCTGAGATGGAAGTTGTCAACTGTCCAGAGAAAGGTCTGCCC
diff -r b110a31a9c61 -r ec783806a5c3 test-data/absrel-in1.nhx
--- a/test-data/absrel-in1.nhx	Thu Aug 18 13:53:29 2022 +0000
+++ b/test-data/absrel-in1.nhx	Thu Mar 02 15:15:38 2023 +0000
@@ -1,1 +1,1 @@
-((((Pig:0.147969,Cow:0.213430):0.085099,Horse:0.165787,Cat:0.264806):0.058611,((RhMonkey:0.002015,Baboon:0.003108):0.022733,(Human:0.004349,Chimp:0.000799):0.011873):0.101856):0.340802,Rat:0.050958,Mouse:0.097950);
\ No newline at end of file
+(((Pig:0.147969,Cow:0.21343):0.085099,Baboon:0.011873):0.340802,Rat:0.050958);
diff -r b110a31a9c61 -r ec783806a5c3 test-data/absrel-out1.json
--- a/test-data/absrel-out1.json	Thu Aug 18 13:53:29 2022 +0000
+++ /dev/null	Thu Jan 01 00:00:00 1970 +0000
@@ -1,478 +0,0 @@
-{
- "analysis":{
-   "authors":"Sergei L Kosakovsky Pond, Ben Murrell, Steven Weaver and Temple iGEM / UCSD viral evolution group",
-   "citation":"Less Is More: An Adaptive Branch-Site Random Effects Model for Efficient Detection of Episodic Diversifying Selection (2015). Mol Biol Evol 32 (5): 1342-1353. v2.2 adds support for multiple-hit models",
-   "contact":"spond@temple.edu",
-   "info":"aBSREL (Adaptive branch-site random effects likelihood)\n                            uses an adaptive random effects branch-site model framework\n                            to test whether each branch has evolved under positive selection,\n                            using a procedure which infers an optimal number of rate categories per branch.",
-   "requirements":"in-frame codon alignment and a phylogenetic tree",
-   "version":"2.2"
-  },
- "branch attributes":{
-   "0":{
-     "Baboon":{
-       "Baseline MG94xREV":0.001816807585564731,
-       "Baseline MG94xREV omega ratio":0,
-       "Corrected P-value":1,
-       "Full adaptive model":0.001810407118394509,
-       "LRT":0,
-       "Nucleotide GTR":0.001678881906620672,
-       "Rate Distributions":        [
-[0, 1] 
-        ],
-       "Rate classes":1,
-       "Uncorrected P-value":1,
-       "original name":"Baboon",
-       "rate at which 2 nucleotides are changed instantly within a single codon":0
-      },
-     "Cat":{
-       "Baseline MG94xREV":0.2286001363527903,
-       "Baseline MG94xREV omega ratio":1.403298474422089,
-       "Corrected P-value":1,
-       "Full adaptive model":0.1219386838393392,
-       "LRT":1.644967676056694,
-       "Nucleotide GTR":0.265904547400163,
-       "Rate Distributions":        [
-[0.2130519766306851, 0.6352283641519592],
-        [2.628217450705319, 0.3647716358480408] 
-        ],
-       "Rate classes":2,
-       "Uncorrected P-value":0.171730764045231,
-       "original name":"Cat",
-       "rate at which 2 nucleotides are changed instantly within a single codon":0
-      },
-     "Chimp":{
-       "Baseline MG94xREV":0.001840311209746262,
-       "Baseline MG94xREV omega ratio":10000000000,
-       "Corrected P-value":1,
-       "Full adaptive model":0.001841979303044237,
-       "LRT":0.6159123786974305,
-       "Nucleotide GTR":0.001816713800925801,
-       "Rate Distributions":        [
-[10000000000, 1] 
-        ],
-       "Rate classes":1,
-       "Uncorrected P-value":0.3069983227523322,
-       "original name":"Chimp",
-       "rate at which 2 nucleotides are changed instantly within a single codon":0
-      },
-     "Cow":{
-       "Baseline MG94xREV":0.2070244948790512,
-       "Baseline MG94xREV omega ratio":2.153434974462683,
-       "Corrected P-value":0.5006146299996015,
-       "Full adaptive model":0.1241125417707662,
-       "LRT":4.898194538953248,
-       "Nucleotide GTR":0.2481512612523618,
-       "Rate Distributions":        [
-[0, 0.52318726440949],
-        [2.444056517734385, 0.47681273559051] 
-        ],
-       "Rate classes":2,
-       "Uncorrected P-value":0.03128841437497509,
-       "original name":"Cow",
-       "rate at which 2 nucleotides are changed instantly within a single codon":0
-      },
-     "Horse":{
-       "Baseline MG94xREV":0.190365915457708,
-       "Baseline MG94xREV omega ratio":1.182933895494305,
-       "Corrected P-value":1,
-       "Full adaptive model":0.0869489794025302,
-       "LRT":2.047309801283518,
-       "Nucleotide GTR":0.2090927256979082,
-       "Rate Distributions":        [
-[0, 0.5397658078247131],
-        [1.633257246666139, 0.4602341921752869] 
-        ],
-       "Rate classes":2,
-       "Uncorrected P-value":0.1382789032066179,
-       "original name":"Horse",
-       "rate at which 2 nucleotides are changed instantly within a single codon":0
-      },
-     "Human":{
-       "Baseline MG94xREV":0,
-       "Baseline MG94xREV omega ratio":1,
-       "Corrected P-value":1,
-       "Full adaptive model":0,
-       "LRT":0,
-       "Nucleotide GTR":0,
-       "Rate Distributions":        [
-[1, 1] 
-        ],
-       "Rate classes":1,
-       "Uncorrected P-value":1,
-       "original name":"Human",
-       "rate at which 2 nucleotides are changed instantly within a single codon":0.0006106118725184574
-      },
-     "Mouse":{
-       "Baseline MG94xREV":0.1083167307250788,
-       "Baseline MG94xREV omega ratio":0.5108576904540283,
-       "Corrected P-value":1,
-       "Full adaptive model":0.1078010043714489,
-       "LRT":0,
-       "Nucleotide GTR":0.1181001275359051,
-       "Rate Distributions":        [
-[0.5087375113796073, 1] 
-        ],
-       "Rate classes":1,
-       "Uncorrected P-value":1,
-       "original name":"Mouse",
-       "rate at which 2 nucleotides are changed instantly within a single codon":0.4244832903005548
-      },
-     "Node1":{
-       "Baseline MG94xREV":0.2542393300501047,
-       "Baseline MG94xREV omega ratio":0.2997498382776075,
-       "Corrected P-value":1,
-       "Full adaptive model":0.2550466752020236,
-       "LRT":0,
-       "Nucleotide GTR":0.2767426965701868,
-       "Rate Distributions":        [
-[0.2932817609633239, 1] 
-        ],
-       "Rate classes":1,
-       "Uncorrected P-value":1,
-       "rate at which 2 nucleotides are changed instantly within a single codon":0.9114373463003921
-      },
-     "Node12":{
-       "Baseline MG94xREV":0.01400815185374474,
-       "Baseline MG94xREV omega ratio":0.2754467062829232,
-       "Corrected P-value":1,
-       "Full adaptive model":0.01437973904273591,
-       "LRT":0,
-       "Nucleotide GTR":0.01784721909304638,
-       "Rate Distributions":        [
-[0.3037614070859027, 1] 
-        ],
-       "Rate classes":1,
-       "Uncorrected P-value":1,
-       "rate at which 2 nucleotides are changed instantly within a single codon":0.5084909616267814
-      },
-     "Node2":{
-       "Baseline MG94xREV":0.0400106272595141,
-       "Baseline MG94xREV omega ratio":0.116408812566168,
-       "Corrected P-value":1,
-       "Full adaptive model":0.03991940069030483,
-       "LRT":0,
-       "Nucleotide GTR":0.06613304839358287,
-       "Rate Distributions":        [
-[0.1193993042178124, 1] 
-        ],
-       "Rate classes":1,
-       "Uncorrected P-value":1,
-       "rate at which 2 nucleotides are changed instantly within a single codon":9.28646275825122
-      },
-     "Node3":{
-       "Baseline MG94xREV":0.08548068002443369,
-       "Baseline MG94xREV omega ratio":1.293385437932658,
-       "Corrected P-value":1,
-       "Full adaptive model":0.08590119038008139,
-       "LRT":0.1383887036890883,
-       "Nucleotide GTR":0.09881178513658169,
-       "Rate Distributions":        [
-[1.330576641567385, 1] 
-        ],
-       "Rate classes":1,
-       "Uncorrected P-value":0.4219212196398351,
-       "rate at which 2 nucleotides are changed instantly within a single codon":0.8390789546113498
-      },
-     "Node8":{
-       "Baseline MG94xREV":0.09463393920061362,
-       "Baseline MG94xREV omega ratio":1.862136443854597,
-       "Corrected P-value":1,
-       "Full adaptive model":0.0958035263641453,
-       "LRT":0.7150293976401372,
-       "Nucleotide GTR":0.1062333225692588,
-       "Rate Distributions":        [
-[1.883870769808856, 1] 
-        ],
-       "Rate classes":1,
-       "Uncorrected P-value":0.2893795680778183,
-       "rate at which 2 nucleotides are changed instantly within a single codon":0.512238843416092
-      },
-     "Node9":{
-       "Baseline MG94xREV":0.02846111726225027,
-       "Baseline MG94xREV omega ratio":0.4321055128385307,
-       "Corrected P-value":1,
-       "Full adaptive model":0.02810856974543091,
-       "LRT":0,
-       "Nucleotide GTR":0.02566185438854229,
-       "Rate Distributions":        [
-[0.4185836885800617, 1] 
-        ],
-       "Rate classes":1,
-       "Uncorrected P-value":1,
-       "rate at which 2 nucleotides are changed instantly within a single codon":0
-      },
-     "Pig":{
-       "Baseline MG94xREV":0.1782835053555321,
-       "Baseline MG94xREV omega ratio":1.275728452678247,
-       "Corrected P-value":1,
-       "Full adaptive model":0.1729188354138871,
-       "LRT":0.3324036585026988,
-       "Nucleotide GTR":0.1871760137183495,
-       "Rate Distributions":        [
-[1.235108129487059, 1] 
-        ],
-       "Rate classes":1,
-       "Uncorrected P-value":0.3669120164240152,
-       "original name":"Pig",
-       "rate at which 2 nucleotides are changed instantly within a single codon":0.1143447431158695
-      },
-     "Rat":{
-       "Baseline MG94xREV":0.06315403896300904,
-       "Baseline MG94xREV omega ratio":0.8744850915248316,
-       "Corrected P-value":1,
-       "Full adaptive model":0.06408078523886611,
-       "LRT":0,
-       "Nucleotide GTR":0.0666364425850592,
-       "Rate Distributions":        [
-[0.8782045320352186, 1] 
-        ],
-       "Rate classes":1,
-       "Uncorrected P-value":1,
-       "original name":"Rat",
-       "rate at which 2 nucleotides are changed instantly within a single codon":0.1346164190615118
-      },
-     "RhMonkey":{
-       "Baseline MG94xREV":0.003671939837747083,
-       "Baseline MG94xREV omega ratio":10000000000,
-       "Corrected P-value":1,
-       "Full adaptive model":0.003675047654636179,
-       "LRT":1.165062770327495,
-       "Nucleotide GTR":0.003777016173741061,
-       "Rate Distributions":        [
-[10000000000, 1] 
-        ],
-       "Rate classes":1,
-       "Uncorrected P-value":0.2236284592802686,
-       "original name":"RhMonkey",
-       "rate at which 2 nucleotides are changed instantly within a single codon":0
-      }
-    },
-   "attributes":{
-     "Baseline MG94xREV":{
-       "attribute type":"branch length",
-       "display order":1
-      },
-     "Baseline MG94xREV omega ratio":{
-       "attribute type":"branch label",
-       "display order":1
-      },
-     "Corrected P-value":{
-       "attribute type":"branch label",
-       "display order":6
-      },
-     "Full adaptive model":{
-       "attribute type":"branch length",
-       "display order":2
-      },
-     "LRT":{
-       "attribute type":"branch label",
-       "display order":4
-      },
-     "Nucleotide GTR":{
-       "attribute type":"branch length",
-       "display order":0
-      },
-     "Rate Distributions":{
-       "attribute type":"branch label",
-       "display order":3
-      },
-     "Rate classes":{
-       "attribute type":"branch label",
-       "display order":2
-      },
-     "Uncorrected P-value":{
-       "attribute type":"branch label",
-       "display order":5
-      },
-     "original name":{
-       "attribute type":"node label",
-       "display order":-1
-      },
-     "rate at which 2 nucleotides are changed instantly within a single codon":{
-       "attribute type":"branch label",
-       "display order":7
-      }
-    }
-  },
- "data partitions":{
-   "0":{
-     "coverage":      [
-[0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 142, 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 154, 155, 156, 157, 158, 159, 160, 161, 162, 163, 164, 165, 166, 167, 168, 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181, 182, 183, 184, 185, 186] 
-      ],
-     "name":"absrel.filter.default"
-    }
-  },
- "fits":{
-   "Baseline MG94xREV":{
-     "AIC-c":6983.763305606333,
-     "Equilibrium frequencies":      [
-[0.04875339327772683],
-      [0.03982858547830345],
-      [0.04946803524790992],
-      [0.04152216138298744],
-      [0.01811683453600613],
-      [0.01480036248560469],
-      [0.0183823965708893],
-      [0.01542969784826435],
-      [0.01894694796506697],
-      [0.01547851515238824],
-      [0.01922467805342367],
-      [0.01613668666381816],
-      [0.02832099415740372],
-      [0.02313654621336914],
-      [0.02873613184734657],
-      [0.02412034959764736],
-      [0.01662182431200483],
-      [0.01357902918971745],
-      [0.01686547203528639],
-      [0.01415643148428886],
-      [0.006176695005242439],
-      [0.005045987744654046],
-      [0.006267234867003878],
-      [0.005260551308914496],
-      [0.006459711194459957],
-      [0.005277194922783805],
-      [0.006554399593040238],
-      [0.005501589790395056],
-      [0.009655668202293983],
-      [0.007888099278638223],
-      [0.009797203904398108],
-      [0.008223514024394991],
-      [0.03326722643528176],
-      [0.02717732003095303],
-      [0.03375486749252685],
-      [0.02833294365668738],
-      [0.01236215156074466],
-      [0.01009913314808799],
-      [0.01254335971371867],
-      [0.01052856463184265],
-      [0.01292858539344675],
-      [0.0105618754683007],
-      [0.0131180965046964],
-      [0.01101098350431497],
-      [0.0193250328267319],
-      [0.01578738770911659],
-      [0.0196083049972345],
-      [0.01645869298147252],
-      [0.01962343746171723],
-      [0.02045785777700414],
-      [0.008926115885166477],
-      [0.007292098982657142],
-      [0.009056957588961733],
-      [0.007602170831388156],
-      [0.007626222986467745],
-      [0.009471947420992787],
-      [0.007950502328516303],
-      [0.01395367801862353],
-      [0.01139931439306339],
-      [0.01415821524731906],
-      [0.01188403168729233] 
-      ],
-     "Log Likelihood":-3427.720059001285,
-     "Rate Distributions":{
-       "Per-branch delta":{
-         "2.5%":0,
-         "97.5%":12.07373117808175,
-         "Mean":1.277646334033236,
-         "Median":0.4551223038316586
-        },
-       "Per-branch omega":{
-         "2.5%":0,
-         "97.5%":2.153434974462683,
-         "Mean":666666667.5119981,
-         "Median":1
-        }
-      },
-     "display order":1,
-     "estimated parameters":62
-    },
-   "Full adaptive model":{
-     "AIC-c":6972.859938351839,
-     "Log Likelihood":-3415.824749853321,
-     "Rate Distributions":{
-      },
-     "display order":2,
-     "estimated parameters":68
-    },
-   "Nucleotide GTR":{
-     "AIC-c":7112.857317645923,
-     "Equilibrium frequencies":      [
-[0.3592490842490842],
-      [0.181959706959707],
-      [0.240018315018315],
-      [0.2187728937728937] 
-      ],
-     "Log Likelihood":-3532.321228205235,
-     "Rate Distributions":{
-       "Substitution rate from nucleotide A to nucleotide C":0.5498703043473002,
-       "Substitution rate from nucleotide A to nucleotide G":1,
-       "Substitution rate from nucleotide A to nucleotide T":0.2646979624678532,
-       "Substitution rate from nucleotide C to nucleotide G":0.4921328068285813,
-       "Substitution rate from nucleotide C to nucleotide T":1.028960084526602,
-       "Substitution rate from nucleotide G to nucleotide T":0.3044365000595399
-      },
-     "display order":0,
-     "estimated parameters":24
-    }
-  },
- "input":{
-   "file name":"/tmp/tmpx_42i6f0/job_working_directory/000/6/working/./absrel_input.fa",
-   "number of sequences":10,
-   "number of sites":187,
-   "partition count":1,
-   "trees":{
-     "0":"((((Pig:0.147969,Cow:0.21343)Node3:0.08509899999999999,Horse:0.165787,Cat:0.264806)Node2:0.058611,((RhMonkey:0.002015,Baboon:0.003108)Node9:0.022733,(Human:0.004349,Chimp:0.000799)Node12:0.011873)Node8:0.101856)Node1:0.340802,Rat:0.050958,Mouse:0.09795)"
-    }
-  },
- "test results":{
-   "P-value threshold":0.05,
-   "positive test results":0,
-   "tested":16
-  },
- "tested":{
-   "0":{
-     "Baboon":"test",
-     "Cat":"test",
-     "Chimp":"test",
-     "Cow":"test",
-     "Horse":"test",
-     "Human":"test",
-     "Mouse":"test",
-     "Node1":"test",
-     "Node12":"test",
-     "Node2":"test",
-     "Node3":"test",
-     "Node8":"test",
-     "Node9":"test",
-     "Pig":"test",
-     "Rat":"test",
-     "RhMonkey":"test"
-    }
-  },
- "timers":{
-   "Baseline model fitting":{
-     "order":2,
-     "timer":17
-    },
-   "Complexity analysis":{
-     "order":3,
-     "timer":110
-    },
-   "Full adaptive model fitting":{
-     "order":4,
-     "timer":20
-    },
-   "Overall":{
-     "order":0,
-     "timer":259
-    },
-   "Preliminary model fitting":{
-     "order":1,
-     "timer":0
-    },
-   "Testing for selection":{
-     "order":5,
-     "timer":112
-    }
-  }
-}
\ No newline at end of file
diff -r b110a31a9c61 -r ec783806a5c3 test-data/absrel-out2.json
--- a/test-data/absrel-out2.json	Thu Aug 18 13:53:29 2022 +0000
+++ /dev/null	Thu Jan 01 00:00:00 1970 +0000
@@ -1,535 +0,0 @@
-{
- "Synonymous site-posteriors":  [
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-  ],
- "analysis":{
-   "authors":"Sergei L Kosakovsky Pond, Ben Murrell, Steven Weaver and Temple iGEM / UCSD viral evolution group",
-   "citation":"Less Is More: An Adaptive Branch-Site Random Effects Model for Efficient Detection of Episodic Diversifying Selection (2015). Mol Biol Evol 32 (5): 1342-1353. v2.2 adds support for multiple-hit models. v2.3 adds support for SRV",
-   "contact":"spond@temple.edu",
-   "info":"aBSREL (Adaptive branch-site random effects likelihood)\n                            uses an adaptive random effects branch-site model framework\n                            to test whether each branch has evolved under positive selection,\n                            using a procedure which infers an optimal number of rate categories per branch.",
-   "requirements":"in-frame codon alignment and a phylogenetic tree",
-   "version":"2.3"
-  },
- "branch attributes":{
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-       "Rate Distributions":        [
-[0, 1] 
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-       "Rate classes":1,
-       "Uncorrected P-value":1,
-       "original name":"Baboon",
-       "rate at which 2 nucleotides are changed instantly within a single codon":0
-      },
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-        ],
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-       "original name":"Cat",
-       "rate at which 2 nucleotides are changed instantly within a single codon":0.2039176940606485
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-[10000000000, 1] 
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-       "original name":"Chimp",
-       "rate at which 2 nucleotides are changed instantly within a single codon":0
-      },
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-       "Baseline MG94xREV omega ratio":1.996288552263199,
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-       "Rate Distributions":        [
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-       "Rate classes":1,
-       "Uncorrected P-value":0.07889622593515888,
-       "original name":"Cow",
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-      },
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-       "Rate Distributions":        [
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-        ],
-       "Rate classes":1,
-       "Uncorrected P-value":0.393889915055757,
-       "original name":"Horse",
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-     "Human":{
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-       "Corrected P-value":1,
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-       "Full adaptive model (non-synonymous subs/site)":1e-10,
-       "Full adaptive model (synonymous subs/site)":1e-10,
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-       "Nucleotide GTR":0,
-       "Rate Distributions":        [
-[1, 1] 
-        ],
-       "Rate classes":1,
-       "Uncorrected P-value":1,
-       "original name":"Human",
-       "rate at which 2 nucleotides are changed instantly within a single codon":0.0009494209875164728
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-       "Rate Distributions":        [
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-       "Uncorrected P-value":1,
-       "original name":"Mouse",
-       "rate at which 2 nucleotides are changed instantly within a single codon":0.02214869577417109
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-       "Full adaptive model (synonymous subs/site)":0.006974058389585205,
-       "LRT":0,
-       "Nucleotide GTR":0.01784222107494562,
-       "Rate Distributions":        [
-[0.2813759516294281, 1] 
-        ],
-       "Rate classes":1,
-       "Uncorrected P-value":1,
-       "rate at which 2 nucleotides are changed instantly within a single codon":0.4640974620285408
-      },
-     "Node2":{
-       "Baseline MG94xREV":0.04571805957848055,
-       "Baseline MG94xREV omega ratio":0.07808093503260165,
-       "Corrected P-value":1,
-       "Full adaptive model":0.0459318071864371,
-       "Full adaptive model (non-synonymous subs/site)":0.02632650948831447,
-       "Full adaptive model (synonymous subs/site)":0.01960529769812262,
-       "LRT":0,
-       "Nucleotide GTR":0.06614755778044307,
-       "Rate Distributions":        [
-[0.07994399997950775, 1] 
-        ],
-       "Rate classes":1,
-       "Uncorrected P-value":1,
-       "rate at which 2 nucleotides are changed instantly within a single codon":10.77888358494443
-      },
-     "Node3":{
-       "Baseline MG94xREV":0.1076878090259787,
-       "Baseline MG94xREV omega ratio":1.418168092305362,
-       "Corrected P-value":1,
-       "Full adaptive model":0.1082923487440297,
-       "Full adaptive model (non-synonymous subs/site)":0.08948990966777266,
-       "Full adaptive model (synonymous subs/site)":0.01880243907625684,
-       "LRT":0.2456529644996408,
-       "Nucleotide GTR":0.09883748387954429,
-       "Rate Distributions":        [
-[1.433858907010162, 1] 
-        ],
-       "Rate classes":1,
-       "Uncorrected P-value":0.389355679288724,
-       "rate at which 2 nucleotides are changed instantly within a single codon":0.3287265444712935
-      },
-     "Node8":{
-       "Baseline MG94xREV":0.1135770124969486,
-       "Baseline MG94xREV omega ratio":2.028136557891868,
-       "Corrected P-value":1,
-       "Full adaptive model":0.1147398059647541,
-       "Full adaptive model (non-synonymous subs/site)":0.0990475665351926,
-       "Full adaptive model (synonymous subs/site)":0.01569223942956148,
-       "LRT":0.7886998749927443,
-       "Nucleotide GTR":0.1062201244057951,
-       "Rate Distributions":        [
-[1.988476719481082, 1] 
-        ],
-       "Rate classes":1,
-       "Uncorrected P-value":0.2771341436242022,
-       "rate at which 2 nucleotides are changed instantly within a single codon":0.2354207827705045
-      },
-     "Node9":{
-       "Baseline MG94xREV":0.03003888198106763,
-       "Baseline MG94xREV omega ratio":0.4077675922423373,
-       "Corrected P-value":1,
-       "Full adaptive model":0.03019973043687331,
-       "Full adaptive model (non-synonymous subs/site)":0.01619043357790366,
-       "Full adaptive model (synonymous subs/site)":0.01400929685896962,
-       "LRT":0,
-       "Nucleotide GTR":0.02567813733543303,
-       "Rate Distributions":        [
-[0.4119078417573153, 1] 
-        ],
-       "Rate classes":1,
-       "Uncorrected P-value":1,
-       "rate at which 2 nucleotides are changed instantly within a single codon":0
-      },
-     "Pig":{
-       "Baseline MG94xREV":0.217114312357174,
-       "Baseline MG94xREV omega ratio":1.283370430439691,
-       "Corrected P-value":1,
-       "Full adaptive model":0.2181331361104026,
-       "Full adaptive model (non-synonymous subs/site)":0.1712686263446052,
-       "Full adaptive model (synonymous subs/site)":0.04686450976579729,
-       "LRT":0.5406119303397645,
-       "Nucleotide GTR":0.1871390433004313,
-       "Rate Distributions":        [
-[1.302541757406645, 1] 
-        ],
-       "Rate classes":1,
-       "Uncorrected P-value":0.3213796354214938,
-       "original name":"Pig",
-       "rate at which 2 nucleotides are changed instantly within a single codon":0
-      },
-     "Rat":{
-       "Baseline MG94xREV":0.06785652890791004,
-       "Baseline MG94xREV omega ratio":0.9234518387715737,
-       "Corrected P-value":1,
-       "Full adaptive model":0.06783877994658692,
-       "Full adaptive model (non-synonymous subs/site)":0.04934287026354431,
-       "Full adaptive model (synonymous subs/site)":0.01849590968304254,
-       "LRT":0,
-       "Nucleotide GTR":0.06661490534189227,
-       "Rate Distributions":        [
-[0.939079296251313, 1] 
-        ],
-       "Rate classes":1,
-       "Uncorrected P-value":1,
-       "original name":"Rat",
-       "rate at which 2 nucleotides are changed instantly within a single codon":0.02234985038534893
-      },
-     "RhMonkey":{
-       "Baseline MG94xREV":0.0036869629402653,
-       "Baseline MG94xREV omega ratio":10000000000,
-       "Corrected P-value":1,
-       "Full adaptive model":0.003691831254195047,
-       "Full adaptive model (non-synonymous subs/site)":0.003691831254195047,
-       "Full adaptive model (synonymous subs/site)":1e-10,
-       "LRT":1.049935795353122,
-       "Nucleotide GTR":0.003778804730491441,
-       "Rate Distributions":        [
-[10000000000, 1] 
-        ],
-       "Rate classes":1,
-       "Uncorrected P-value":0.2385766813428075,
-       "original name":"RhMonkey",
-       "rate at which 2 nucleotides are changed instantly within a single codon":0
-      }
-    },
-   "attributes":{
-     "Baseline MG94xREV":{
-       "attribute type":"branch length",
-       "display order":1
-      },
-     "Baseline MG94xREV omega ratio":{
-       "attribute type":"branch label",
-       "display order":1
-      },
-     "Corrected P-value":{
-       "attribute type":"branch label",
-       "display order":6
-      },
-     "Full adaptive model":{
-       "attribute type":"branch length",
-       "display order":2
-      },
-     "Full adaptive model (non-synonymous subs/site)":{
-       "attribute type":"branch label",
-       "display order":10
-      },
-     "Full adaptive model (synonymous subs/site)":{
-       "attribute type":"branch label",
-       "display order":9
-      },
-     "LRT":{
-       "attribute type":"branch label",
-       "display order":4
-      },
-     "Nucleotide GTR":{
-       "attribute type":"branch length",
-       "display order":0
-      },
-     "Rate Distributions":{
-       "attribute type":"branch label",
-       "display order":3
-      },
-     "Rate classes":{
-       "attribute type":"branch label",
-       "display order":2
-      },
-     "Uncorrected P-value":{
-       "attribute type":"branch label",
-       "display order":5
-      },
-     "original name":{
-       "attribute type":"node label",
-       "display order":-1
-      },
-     "rate at which 2 nucleotides are changed instantly within a single codon":{
-       "attribute type":"branch label",
-       "display order":7
-      }
-    }
-  },
- "data partitions":{
-   "0":{
-     "coverage":      [
-[0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 142, 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 154, 155, 156, 157, 158, 159, 160, 161, 162, 163, 164, 165, 166, 167, 168, 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181, 182, 183, 184, 185, 186] 
-      ],
-     "name":"absrel.filter.default"
-    }
-  },
- "fits":{
-   "Baseline MG94xREV":{
-     "AIC-c":6938.369899478594,
-     "Equilibrium frequencies":      [
-[0.04876086397632926],
-      [0.03982224127745371],
-      [0.0494959405650269],
-      [0.04152830682371345],
-      [0.01810345074594235],
-      [0.01478480742075003],
-      [0.01837636270304883],
-      [0.01541821854326533],
-      [0.01892910005547028],
-      [0.01545910240515689],
-      [0.01921445878706794],
-      [0.01612140169177368],
-      [0.02829747763884322],
-      [0.02311011106415996],
-      [0.02872406592369408],
-      [0.02410019507229243],
-      [0.01663805943190806],
-      [0.01358804506433061],
-      [0.01688888041768248],
-      [0.01417018446135155],
-      [0.006177213955434187],
-      [0.005044834822351987],
-      [0.006270336287397383],
-      [0.00526096577332031],
-      [0.006458939937330408],
-      [0.005274916061901906],
-      [0.006556309326397028],
-      [0.005500904159606446],
-      [0.009655594186286731],
-      [0.007885574003572761],
-      [0.009801153568494354],
-      [0.008223407979974132],
-      [0.03327785448210915],
-      [0.02717750758119989],
-      [0.03377952261833742],
-      [0.02834184710178207],
-      [0.01235507229404208],
-      [0.01009019590244688],
-      [0.01254132667213156],
-      [0.01052248035033209],
-      [0.01291855364640413],
-      [0.01055038238273567],
-      [0.01311330258173711],
-      [0.01100238215235291],
-      [0.01931219560697892],
-      [0.0157719705998612],
-      [0.01960332955558842],
-      [0.01644767379420349],
-      [0.01965132601881859],
-      [0.02049322866376102],
-      [0.008933621043463411],
-      [0.007295949736387736],
-      [0.009068296583349953],
-      [0.007608523013862737],
-      [0.007628698224327205],
-      [0.009481877006094248],
-      [0.00795552712159237],
-      [0.01396413011303752],
-      [0.01140428846505027],
-      [0.01417464125436193],
-      [0.01189287130232129] 
-      ],
-     "Log Likelihood":-3399.656647852504,
-     "Rate Distributions":{
-       "Per-branch delta":{
-         "2.5%":0,
-         "97.5%":10.66318587577853,
-         "Mean":1.142287895998736,
-         "Median":0.2080459069952131
-        },
-       "Per-branch omega":{
-         "2.5%":0,
-         "97.5%":2.028136557891868,
-         "Mean":666666667.5178814,
-         "Median":1
-        },
-       "Synonymous site-to-site rates":{
-         "0":{
-           "proportion":0.3499070593950995,
-           "rate":0.3584907731592092
-          },
-         "1":{
-           "proportion":0.5579704535685105,
-           "rate":1.083607309819905
-          },
-         "2":{
-           "proportion":0.09212248703639001,
-           "rate":2.93023662601063
-          }
-        }
-      },
-     "display order":1,
-     "estimated parameters":67
-    },
-   "Full adaptive model":{
-     "AIC-c":6937.867430345418,
-     "Log Likelihood":-3399.405413285916,
-     "Rate Distributions":{
-      },
-     "display order":2,
-     "estimated parameters":67
-    },
-   "Nucleotide GTR":{
-     "AIC-c":7112.857288723968,
-     "Equilibrium frequencies":      [
-[0.3592490842490842],
-      [0.181959706959707],
-      [0.240018315018315],
-      [0.2187728937728937] 
-      ],
-     "Log Likelihood":-3532.321213744258,
-     "Rate Distributions":{
-       "Substitution rate from nucleotide A to nucleotide C":0.5501644800943087,
-       "Substitution rate from nucleotide A to nucleotide G":1,
-       "Substitution rate from nucleotide A to nucleotide T":0.2646800222727828,
-       "Substitution rate from nucleotide C to nucleotide G":0.4918071762416347,
-       "Substitution rate from nucleotide C to nucleotide T":1.028675134787727,
-       "Substitution rate from nucleotide G to nucleotide T":0.3045013055839741
-      },
-     "display order":0,
-     "estimated parameters":24
-    }
-  },
- "input":{
-   "file name":"/tmp/tmpasswxnks/job_working_directory/000/9/working/./input.fasta",
-   "number of sequences":10,
-   "number of sites":187,
-   "partition count":1,
-   "trees":{
-     "0":"((((Pig:0.147969,Cow:0.21343)Node3:0.08509899999999999,Horse:0.165787,Cat:0.264806)Node2:0.058611,((RhMonkey:0.002015,Baboon:0.003108)Node9:0.022733,(Human:0.004349,Chimp:0.000799)Node12:0.011873)Node8:0.101856)Node1:0.340802,Rat:0.050958,Mouse:0.09795)"
-    }
-  },
- "runtime":"2.5.36",
- "test results":{
-   "P-value threshold":0.05,
-   "positive test results":0,
-   "tested":16
-  },
- "tested":{
-   "0":{
-     "Baboon":"test",
-     "Cat":"test",
-     "Chimp":"test",
-     "Cow":"test",
-     "Horse":"test",
-     "Human":"test",
-     "Mouse":"test",
-     "Node1":"test",
-     "Node12":"test",
-     "Node2":"test",
-     "Node3":"test",
-     "Node8":"test",
-     "Node9":"test",
-     "Pig":"test",
-     "Rat":"test",
-     "RhMonkey":"test"
-    }
-  },
- "timers":{
-   "Baseline model fitting":{
-     "order":2,
-     "timer":129
-    },
-   "Complexity analysis":{
-     "order":3,
-     "timer":406
-    },
-   "Full adaptive model fitting":{
-     "order":4,
-     "timer":46
-    },
-   "Overall":{
-     "order":0,
-     "timer":1006
-    },
-   "Preliminary model fitting":{
-     "order":1,
-     "timer":0
-    },
-   "Testing for selection":{
-     "order":5,
-     "timer":424
-    }
-  }
-}
\ No newline at end of file
diff -r b110a31a9c61 -r ec783806a5c3 test-data/busted-out1.json
--- a/test-data/busted-out1.json	Thu Aug 18 13:53:29 2022 +0000
+++ /dev/null	Thu Jan 01 00:00:00 1970 +0000
@@ -1,394 +0,0 @@
-{
- "Evidence Ratios":{
-   "constrained":    [
-[1.751697313438667, 0.9490151622254345, 0.9575938099872893, 1.827482077500528, 1.505094606485015, 2.088346790071941, 7.070051504373732, 3.867967952992799, 2.545750919582881, 0.7247660693488289, 0.3196737937441124, 1.489449650902744, 0.6530151351740718, 1.04337285373284, 1.058333334239147, 0.5088801718500566, 0.8550055907613735, 1.110381942461004, 0.565683766000719, 0.6740763008813015, 0.4649952970969699, 0.4036426325687712, 2.442336342315371, 0.9859501295040206, 1.104892115806872, 1.062417300927637, 1.753888646580218, 1.31233150141181, 1.885518048500539, 0.7894296553774935, 0.723576644239061, 0.8827532839004689, 0.6984548336173313, 4.520258616283331, 0.501963856483453, 1.807812329244406, 0.6240669422720765, 0.9486848826066486, 0.9673516986934556, 1.479968294590536, 1.364799619489093, 1.709865961585205, 1.218557239747954, 0.7108467425303473, 0.3215450048962207, 2.271412336163041, 0.6355183534074139, 0.8839058954441763, 1.497501825835906, 2.637709102972778, 1.711470421506773, 3.027431470913309, 1.57278424917318, 3.277990564747366, 6.926286311855851, 3.784092751645639, 3.146955337815139, 1.955427417762355, 2.022694964562529, 0.666396825353515, 3.560060598929708, 1.666971860419219, 1.738637096007019, 3.220829375167113, 0.3447106216301303, 0.4881402535027675, 1.387141991322175, 0.5556476307196163, 0.6310295884570762, 0.4580705327203016, 0.4272583872429177, 2.901848650844198, 0.9999999999999991, 1.027519028508734, 2.915165037860989, 2.8354880840935, 1.858569677080054, 0.4521292148676688, 3.009136246768449, 0.705314987368983, 2.743480940643173, 0.3932432097494273, 0.9370673501878248, 0.4620247121091633, 2.83829096947346, 0.9007779218604833, 0.3302046680129435, 1.07627096358673, 1.391320542790854, 1.521972158264955, 0.4323783230969274, 2.334048026570822, 2.149795581008433, 3.074008352247498, 0.4499660997382409, 1.699461664815503, 0.8463586773204229, 2.696688856522739, 0.5804226171984278, 1.135876829610681, 0.8103519829402507, 2.896966803514224, 0.8351241901463535, 1.602690102144888, 0.7282588483860968, 2.78698806913424, 0.9149220061406503, 0.6214951247464974, 1.819052515045006, 0.2353728426618933, 2.441495991316177, 0.4689975029575301, 6.36479070098702, 0.501963856483453, 1.155173566804371, 0.3029791752249296, 3.710694239289469, 0.7371667962152887, 1.911346283016054, 0.3691203298834842, 1.027711744192628, 1.502724363578014, 0.3011502503588185, 0.9854850481813123, 0.3756291290353144, 4.112619261559145, 2.95680467264194, 0.4290868700547413, 0.4685206821924932, 0.4059560116267469, 2.50268310954176, 0.5227540827634783, 0.4671119113495291, 0.9338453011500626, 0.5571522059019809, 0.5886144003589358, 1.839204151926823, 1.060599026952742, 3.125234562282934, 2.54439731915596, 5.066889740057174, 2.915048895304102, 1.905524097635808, 2.212264991895895, 3.738815510070657, 2.074128973780481, 3.31083714843465, 0.6408491718084866, 3.068722634962862, 0.9229478196348808, 2.172843296216792, 1.750529904876356, 1.222415748191823, 1.340180507105605, 1.65676234501901, 1.177884311452671, 1.853985207061093, 1.949028686126, 1.848056555892881, 1.490331787720329, 2.808897643683787, 0.5370047325763545, 0.754447735175597, 0.292920631250886, 1.922199953975427, 0.2194780669088011, 2.411432550287456, 0.4936742969382611, 2.687417056073211, 0.8937719293629136, 0.630203462304753, 3.500554848762429, 0.8047116371904648, 2.9258711565943, 2.978602987543041, 1.892870394871532, 1.224886235480212, 3.334368853761007, 1.443700495825233, 1.7051887541283, 0.480593393899601, 0.907604501104216, 0.9198540076829841, 0.8702783448030316, 0.4699917745647508, 0.6213048344098008, 0.9960464828596589] 
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- "analysis":{
-   "authors":"Sergei L Kosakovsky Pond",
-   "citation":"*Gene-wide identification of episodic selection*, Mol Biol Evol. 32(5):1365-71",
-   "contact":"spond@temple.edu",
-   "info":"BUSTED (branch-site unrestricted statistical test of episodic diversification) uses a random effects branch-site model fitted \njointly to all or a subset of tree branches in order to test for alignment-wide evidence of episodic diversifying selection. \nAssuming there is evidence of positive selection (i.e. there is an omega > 1),  BUSTED will also perform a quick evidence-ratio \nstyle analysis to explore which individual sites may have been subject to selection. v2.0 adds support for synonymous rate variation, \nand relaxes the test statistic to 0.5 (chi^2_0 + chi^2_2). Version 2.1 adds a grid search for the initial starting point.\nVersion 2.2 changes the grid search to LHC, and adds an initial search phase to use adaptive Nedler-Mead. Version 3.0 implements the option\nfor branch-site variation in synonymous substitution rates. Version 3.1 adds HMM auto-correlation option for SRV, and binds SRV distributions for multiple branch sets\n",
-   "requirements":"in-frame codon alignment and a phylogenetic tree (optionally annotated with {})",
-   "version":"3.1"
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-[0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 142, 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 154, 155, 156, 157, 158, 159, 160, 161, 162, 163, 164, 165, 166, 167, 168, 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181, 182, 183, 184, 185, 186] 
-      ],
-     "name":"busted.filter.default"
-    }
-  },
- "fits":{
-   "Constrained model":{
-     "AIC-c":6918.865252134614,
-     "Log Likelihood":-3419.580167050914,
-     "Rate Distributions":{
-       "Synonymous site-to-site rates":{
-         "0":{
-           "proportion":0.3286044813984554,
-           "rate":0.3114745230555425
-          },
-         "1":{
-           "proportion":0.5759073485616787,
-           "rate":1.038727366194607
-          },
-         "2":{
-           "proportion":0.09548817003986594,
-           "rate":3.135858111155513
-          }
-        },
-       "Test":{
-         "0":{
-           "omega":0,
-           "proportion":0.1610337459523823
-          },
-         "1":{
-           "omega":0.9239856235614761,
-           "proportion":0
-          },
-         "2":{
-           "omega":1,
-           "proportion":0.8389662540476177
-          }
-        }
-      },
-     "display order":3,
-     "estimated parameters":39
-    },
-   "MG94xREV with separate rates for branch sets":{
-     "AIC-c":6997.104847699299,
-     "Equilibrium frequencies":      [
-[0.04876086397632926],
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-      [0.0494959405650269],
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-      [0.01612140169177368],
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-      [0.02872406592369408],
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-      [0.01663805943190806],
-      [0.01358804506433061],
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-      [0.03327785448210915],
-      [0.02717750758119989],
-      [0.03377952261833742],
-      [0.02834184710178207],
-      [0.01235507229404208],
-      [0.01009019590244688],
-      [0.01254132667213156],
-      [0.01052248035033209],
-      [0.01291855364640413],
-      [0.01055038238273567],
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-      [0.01100238215235291],
-      [0.01931219560697892],
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-      [0.02049322866376102],
-      [0.008933621043463411],
-      [0.007295949736387736],
-      [0.009068296583349953],
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-      [0.007628698224327205],
-      [0.009481877006094248],
-      [0.00795552712159237],
-      [0.01396413011303752],
-      [0.01140428846505027],
-      [0.01417464125436193],
-      [0.01189287130232129] 
-      ],
-     "Log Likelihood":-3467.012706765863,
-     "Rate Distributions":{
-       "non-synonymous/synonymous rate ratio for *test*":        [
-[0.9959842858928788, 1] 
-        ]
-      },
-     "display order":1,
-     "estimated parameters":31
-    },
-   "Nucleotide GTR":{
-     "AIC-c":7112.857310169033,
-     "Equilibrium frequencies":      [
-[0.3592490842490842],
-      [0.181959706959707],
-      [0.240018315018315],
-      [0.2187728937728937] 
-      ],
-     "Log Likelihood":-3532.32122446679,
-     "Rate Distributions":{
-       "Substitution rate from nucleotide A to nucleotide C":0.5501644800943087,
-       "Substitution rate from nucleotide A to nucleotide G":1,
-       "Substitution rate from nucleotide A to nucleotide T":0.2647746107611847,
-       "Substitution rate from nucleotide C to nucleotide G":0.4917423221832032,
-       "Substitution rate from nucleotide C to nucleotide T":1.02837595903795,
-       "Substitution rate from nucleotide G to nucleotide T":0.304509117524575
-      },
-     "display order":0,
-     "estimated parameters":24
-    },
-   "Unconstrained model":{
-     "AIC-c":6910.776988890891,
-     "Log Likelihood":-3414.491829601268,
-     "Rate Distributions":{
-       "Synonymous site-to-site rates":{
-         "0":{
-           "proportion":0.2655037162058198,
-           "rate":0.2749303122566129
-          },
-         "1":{
-           "proportion":0.6321791898264187,
-           "rate":0.9740711294478059
-          },
-         "2":{
-           "proportion":0.1023170939677615,
-           "rate":3.041695877803997
-          }
-        },
-       "Test":{
-         "0":{
-           "omega":0,
-           "proportion":0.386646389823596
-          },
-         "1":{
-           "omega":0.9964438830494696,
-           "proportion":0
-          },
-         "2":{
-           "omega":1.876622752045829,
-           "proportion":0.613353610176404
-          }
-        }
-      },
-     "display order":2,
-     "estimated parameters":40
-    }
-  },
- "input":{
-   "file name":"/tmp/tmpfqvtss8b/job_working_directory/000/3/working/./input.fasta",
-   "number of sequences":10,
-   "number of sites":187,
-   "partition count":1,
-   "trees":{
-     "0":"((((Pig:0.147969,Cow:0.21343)Node3:0.08509899999999999,Horse:0.165787,Cat:0.264806)Node2:0.058611,((RhMonkey:0.002015,Baboon:0.003108)Node9:0.022733,(Human:0.004349,Chimp:0.000799)Node12:0.011873)Node8:0.101856)Node1:0.340802,Rat:0.050958,Mouse:0.09795)"
-    }
-  },
- "test results":{
-   "LRT":10.17667489929045,
-   "p-value":0.003084133210483175
-  },
- "tested":{
-   "0":{
-     "Baboon":"test",
-     "Cat":"test",
-     "Chimp":"test",
-     "Cow":"test",
-     "Horse":"test",
-     "Human":"test",
-     "Mouse":"test",
-     "Node1":"test",
-     "Node12":"test",
-     "Node2":"test",
-     "Node3":"test",
-     "Node8":"test",
-     "Node9":"test",
-     "Pig":"test",
-     "Rat":"test",
-     "RhMonkey":"test"
-    }
-  },
- "timers":{
-   "Constrained BUSTED model fitting":{
-     "order":3,
-     "timer":70
-    },
-   "Overall":{
-     "order":0,
-     "timer":451
-    },
-   "Preliminary model fitting":{
-     "order":1,
-     "timer":10
-    },
-   "Unconstrained BUSTED model fitting":{
-     "order":2,
-     "timer":370
-    }
-  }
-}
\ No newline at end of file
diff -r b110a31a9c61 -r ec783806a5c3 test-data/busted-out2-1.json
--- a/test-data/busted-out2-1.json	Thu Aug 18 13:53:29 2022 +0000
+++ /dev/null	Thu Jan 01 00:00:00 1970 +0000
@@ -1,369 +0,0 @@
-{
- "Evidence Ratios":{
-   "constrained":    [
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-    ]
-  },
- "analysis":{
-   "authors":"Sergei L Kosakovsky Pond",
-   "citation":"*Gene-wide identification of episodic selection*, Mol Biol Evol. 32(5):1365-71",
-   "contact":"spond@temple.edu",
-   "info":"BUSTED (branch-site unrestricted statistical test of episodic diversification) uses a random effects branch-site model fitted \njointly to all or a subset of tree branches in order to test for alignment-wide evidence of episodic diversifying selection. \nAssuming there is evidence of positive selection (i.e. there is an omega > 1),  BUSTED will also perform a quick evidence-ratio \nstyle analysis to explore which individual sites may have been subject to selection. v2.0 adds support for synonymous rate variation, \nand relaxes the test statistic to 0.5 (chi^2_0 + chi^2_2). Version 2.1 adds a grid search for the initial starting point.\nVersion 2.2 changes the grid search to LHC, and adds an initial search phase to use adaptive Nedler-Mead. Version 3.0 implements the option\nfor branch-site variation in synonymous substitution rates. Version 3.1 adds HMM auto-correlation option for SRV, and binds SRV distributions for multiple branch sets\n",
-   "requirements":"in-frame codon alignment and a phylogenetic tree (optionally annotated with {})",
-   "version":"3.1"
-  },
- "background":1,
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- "data partitions":{
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-      ],
-     "name":"busted.filter.default"
-    }
-  },
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-     "Log Likelihood":-3164.403373999521,
-     "Rate Distributions":{
-       "Background":{
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-     "display order":3,
-     "estimated parameters":36
-    },
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-      [0.01017282094890981],
-      [0.01030905823951665],
-      [0.004328407393735399],
-      [0.008746226896405704],
-      [0.008863358836639712],
-      [0.03414665788893068],
-      [0.006538513303760755],
-      [0.0132120929750345],
-      [0.01338903305480236] 
-      ],
-     "Log Likelihood":-3175.995949441886,
-     "Rate Distributions":{
-       "non-synonymous/synonymous rate ratio for *background*":        [
-[0.2379324068936849, 1] 
-        ],
-       "non-synonymous/synonymous rate ratio for *test*":        [
-[0.1777604776475358, 1] 
-        ]
-      },
-     "display order":1,
-     "estimated parameters":29
-    },
-   "Nucleotide GTR":{
-     "AIC-c":6683.094244259512,
-     "Equilibrium frequencies":      [
-[0.4044507575757576],
-      [0.1662878787878788],
-      [0.2095643939393939],
-      [0.2196969696969697] 
-      ],
-     "Log Likelihood":-3320.503280793639,
-     "Rate Distributions":{
-       "Substitution rate from nucleotide A to nucleotide C":0.1815218119292989,
-       "Substitution rate from nucleotide A to nucleotide G":1,
-       "Substitution rate from nucleotide A to nucleotide T":0.08433479296165451,
-       "Substitution rate from nucleotide C to nucleotide G":0.1775869374255926,
-       "Substitution rate from nucleotide C to nucleotide T":1.184827038118431,
-       "Substitution rate from nucleotide G to nucleotide T":0.04288318031815568
-      },
-     "display order":0,
-     "estimated parameters":21
-    },
-   "Unconstrained model":{
-     "AIC-c":6400.149223170942,
-     "Log Likelihood":-3162.670820660715,
-     "Rate Distributions":{
-       "Background":{
-         "0":{
-           "omega":0.1679188282558003,
-           "proportion":0.8207520434237199
-          },
-         "1":{
-           "omega":0.2120937673953722,
-           "proportion":0.1693698006934513
-          },
-         "2":{
-           "omega":13.84252711122189,
-           "proportion":0.00987815588282877
-          }
-        },
-       "Test":{
-         "0":{
-           "omega":0.08367159828032572,
-           "proportion":0.9533274940567786
-          },
-         "1":{
-           "omega":0.2493792697064242,
-           "proportion":0.03716922067476962
-          },
-         "2":{
-           "omega":34.20463703717275,
-           "proportion":0.009503285268451747
-          }
-        }
-      },
-     "display order":2,
-     "estimated parameters":37
-    }
-  },
- "input":{
-   "file name":"/tmp/tmpfzf3u9m4/job_working_directory/000/2/working/./input.nex",
-   "number of sequences":8,
-   "number of sites":440,
-   "partition count":1,
-   "trees":{
-     "0":"((((D_CD_83_ELI,D_CD_83_NDK)Node3,D_UG_94_94UG114)Node2,D_CD_84_84ZR085)Node1,B_US_83_RF,((B_FR_83_HXB2,B_US_86_JRFL)Node10,B_US_90_WEAU160)Node9)"
-    }
-  },
- "test results":{
-   "LRT":3.465106677611402,
-   "p-value":0.08841616008911996
-  },
- "tested":{
-   "0":{
-     "B_FR_83_HXB2":"background",
-     "B_US_83_RF":"background",
-     "B_US_86_JRFL":"background",
-     "B_US_90_WEAU160":"test",
-     "D_CD_83_ELI":"background",
-     "D_CD_83_NDK":"background",
-     "D_CD_84_84ZR085":"background",
-     "D_UG_94_94UG114":"background",
-     "Node1":"background",
-     "Node10":"background",
-     "Node2":"background",
-     "Node3":"background",
-     "Node9":"background"
-    }
-  },
- "timers":{
-   "Constrained BUSTED model fitting":{
-     "order":3,
-     "timer":14
-    },
-   "Overall":{
-     "order":0,
-     "timer":60
-    },
-   "Preliminary model fitting":{
-     "order":1,
-     "timer":3
-    },
-   "Unconstrained BUSTED model fitting":{
-     "order":2,
-     "timer":40
-    }
-  }
-}
\ No newline at end of file
diff -r b110a31a9c61 -r ec783806a5c3 test-data/busted-out2-2.json
--- a/test-data/busted-out2-2.json	Thu Aug 18 13:53:29 2022 +0000
+++ /dev/null	Thu Jan 01 00:00:00 1970 +0000
@@ -1,3395 +0,0 @@
-#NEXUS
-
-BEGIN TAXA;
-	DIMENSIONS NTAX = 8;
-	TAXLABELS
-		'B_FR_83_HXB2' 'B_US_83_RF' 'B_US_86_JRFL' 'B_US_90_WEAU160' 'D_CD_83_ELI' 'D_CD_83_NDK' 'D_CD_84_84ZR085' 'D_UG_94_94UG114' ;
-END;
-
-BEGIN CHARACTERS;
-	DIMENSIONS NCHAR = 1320;
-	FORMAT
-		DATATYPE = DNA
-		GAP=-
-		MISSING=?
-	;
-
-MATRIX
-	'B_FR_83_HXB2'    CCCATTAGCCCTATTGAGACTGTACCAGTAAAATTAAAGCCAGGAATGGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAGAAAAAATAAAAGCATTAGTAGAAATTTGTACAGAGATGGAAAAGGAAGGGAAAATTTCAAAAATTGGGCCTGAAAATCCATACAATACTCCAGTATTTGCCATAAAGAAAAAAGACAGTACTAAATGGAGAAAATTAGTAGATTTCAGAGAACTTAATAAGAGAACTCAAGACTTCTGGGAAGTTCAATTAGGAATACCACATCCCGCAGGGTTAAAAAAGAAAAAATCAGTAACAGTACTGGATGTGGGTGATGCATATTTTTCAGTTCCCTTAGATGAAGACTTCAGGAAGTATACTGCATTTACCATACCTAGTATAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATCTTAGAGCCTTTTAGAAAACAAAATCCAGACATAGTTATCTATCAATACATGGATGATTTGTATGTAGGATCTGACTTAGAAATAGGGCAGCATAGAACAAAAATAGAGGAGCTGAGACAACATCTGTTGAGGTGGGGACTTACCACACCAGACAAAAAACATCAGAAAGAACCTCCATTCCTTTGGATGGGTTATGAACTCCATCCTGATAAATGGACAGTACAGCCTATAGTGCTGCCAGAAAAAGACAGCTGGACTGTCAATGACATACAGAAGTTAGTGGGGAAATTGAATTGGGCAAGTCAGATTTACCCAGGGATTAAAGTAAGGCAATTATGTAAACTCCTTAGAGGAACCAAAGCACTAACAGAAGTAATACCACTAACAGAAGAAGCAGAGCTAGAACTGGCAGAAAACAGAGAGATTCTAAAAGAACCAGTACATGGAGTGTATTATGACCCATCAAAAGACTTAATAGCAGAAATACAGAAGCAGGGGCAAGGCCAATGGACATATCAAATTTATCAAGAGCCATTTAAAAATCTGAAAACAGGAAAATATGCAAGAATGAGGGGTGCCCACACTAATGATGTAAAACAATTAACAGAGGCAGTGCAAAAAATAACCACAGAAAGCATAGTAATATGGGGAAAGACTCCTAAATTTAAACTGCCCATACAAAAGGAAACATGGGAAACATGGTGGACAGAGTATTGGCAAGCCACCTGGATTCCTGAGTGGGAGTTTGTTAATACCCCTCCCTTAGTGAAATTATGGTACCAGTTAGAGAAAGAACCCATAGTAGGAGCAGAAACCTTC
-	'B_US_83_RF'      CCCATTAGTCCTATTGAAACTGTACCAGTAAAATTAAAGCCAGGAATGGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAGGAAAAAATAAAAGCATTGGTAGAAATTTGTACAGAAATGGAAAAGGAAGGAAAAATTTCCAAAATTGGGCCTGAAAATCCATACAATACTCCAGTATTTGCCATAAAGAAAAAAGACAGTACTAAATGGAGAAAATTAGTAGATTTCAGAGAACTTAATAAGAGAACTCAAGACTTCTGGGAAGTTCAGTTAGGAATACCACATCCTGCAGGGTTAAAAAAGAAGAAATCAGTAACAGTATTGGATGTGGGTGATGCATATTTTTCAGTTCCCTTAGATAAAGAGTTCAGGAAGTATACTGCATTTACCATACCTAGTATAAACAATGAAACACCACGGATTAGATATCAGTACAATGTGCTTCCACAAGGGTGGAAAGGATCACCAGCAATATTCCAAAGTAGTATGACAAAAATCTTAGAGCCTTTTAAAAAACAAAATCCAGAAATAGTTATCTATCAATACATGGATGATTTGTATGTAGGATCTGATTTAGAAATAGGGCAGCATAGAATAAAAATAGAGGAACTGAGAGAACATCTGTTAAAGTGGGGGTTTACCACACCGGACAAGAAACATCAGAAAGAACCTCCATTTCTTTGGATGGGTTATGAACTCCATCCTGATAAATGGACAGTACAGCCTATAGTGCTGCCAGAAAAAGACAGCTGGACTGTCAATGACATACAGAAGTTAGTGGGAAAATTGAATTGGGCAAGTCAGATTTATGCAGGGATTAAAGTAAAGCAATTATGTAAACTCCTTAGGGGAACCAAAGCACTAACAGAAGTAGTACAACTAACAAAAGAAGCAGAGCTAGAACTGGCAGAAAATAGGGAGATTCTAAAAGAACCAGTACATGGAGTGTATTATGACCCATCAAAAGACTTAATAGCAGAAATACAGAAGCAGGGGCAAGGCCAATGGACATACCAAATTTATCAAGAGCCATTTAAAAACCTGAAAACAGGAAAGTATGCAAGAATGAGGGGTGCCCACACTAATGATGTAAAACAATTAACAGAGGCAGTACAAAAAGTAGCCACAGAAAGCATAGTAATATGGGGAAAGACTCCTAAATTTAAACTACCCATACAAAAAGAAACATGGGAGGCATGGTGGACAGAGTATTGGCAAGCCACCTGGATTCCTGAGTGGGAGTTTGTCAATACCCCTCCCTTAGTAAAATTGTGGTACCAGTTAGAAAAAGAACCCATAATAGGAGCAGAAACTTTC
-	'B_US_86_JRFL'    CCCATTAGTCCTATTGAAACTGTACCAGTAAAATTAAAGCCAGGAATGGATGGCCCAAAAGTCAAACAATGGCCATTGACAGAAGAAAAAATAAAAGCATTAGTAGAAATTTGTACAGAAATGGAAAAGGAAGGGAAAATTTCAAAAATTGGGCCTGAAAATCCATACAATACTCCAGTATTTGCCATAAAGAAAAAGGACAGTACTAAATGGAGAAAATTAGTAGATTTCAGAGAACTTAATAAGAAAACTCAAGACTTCTGGGAAGTTCAATTAGGAATACCACATCCCGCAGGGTTAAAAAAGAGAAAATCAGTAACAGTACTGGATGTGGGTGATGCATATTTTTCAGTTCCCTTAGATAAAGACTTCAGGAAATATACTGCATTTACCATACCTAGTATAAACAATGAGACACCAGGGATTAGGTATCAGTACAATGTGCTTCCGCAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATCTTAGAGCCTTTTAGAAAACAAAATCCAGACATAATTATCTATCAATACATGGATGATTTGTATGTAGGATCTGACTTAGAGATAGGGCAGCATAGAGCAAAAATAGAGGAATTGAGACAACATCTGTTGAGGTGGGGGTTTACCACACCAGACAAAAAACATCAGAAAGAACCTCCATTCCTTTGGATGGGTTATGAACTCCATCCTGACAAATGGACAGTACAGCCTATAGTGCTGCCAGAAAAAGACAGCTGGACTGTCAATGACATACAGAAGTTAGTGGGAAAATTAAATTGGGCAAGTCAGATTTACGCAGGGATTAAAGTAAAGCAATTATGTAAACTCCTTAGGGGAACCAAAGCACTAACAGAAGTAATACCACTAACAGAAGAAGCAGAGCTAGAACTGGCAGAAAACAGGGAGATTCTAAAAGAGCCAGTACATGGAGTGTATTATGACCCATCAAAAGACTTAATAGCAGAACTACAGAAGCAGGGGCAAGGCCAATGGACATATCAAATTTATCAAGAGCCATTTAAAATTCTGAAAACAGGAAAATATGCAAGAACGAGGGGTGCCCACACTAATGATGTAAAACAATTAACAGAGGCAGTGCAAAAAATAGCCAATGAAAGCATAGTAATATGGGGAAAGATTCCTAAATTTAAATTACCCATACAAAAAGAAACATGGGAAACATGGTGGACAGAGTATTGGCAAGCCACCTGGATTCCTGAGTGGGAGTTTGTCAATACCCCTCCCTTAGTGAAATTATGGTACCAGTTAGAGAAAGAACCCATAGTAGGAGCAGAAACTTTC
-	'B_US_90_WEAU160' CCCATTAGTCCTATTGAAACTGTACCAGTAAAATTAAAGCCAGGAATGGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAGAGAAAATAAAAGCATTAGTAGAAATTTGTACAGAAATGGAAAAGGAAGGAAAAATTTCAAAAATTGGGCCTGAAAATCCATATAATACTCCAGTATTTGCCATAAAGAAAAAAGACAGTACTAAATGGAGAAAATTAGTAGATTTCAGAGAACTTAATAAGAGAACTCAAGACTTCTGGGAAGTTCAATTAGGAATACCACATCCTTCAGGGTTAAAAAAGAAAAAATCAGTAACAGTACTGGATGTGGGTGATGCATATTTTTCAGTACCCTTAGATGAAGACTTCAGGAAGTACACTGCATTTACCATACCTAGTATAAACAATGAAACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATATTAGAGCCTTTTAGAAAACAAAATCCAGACATAGTTATCTATCAATACATGGATGATTTGTATGTAGGATCTGACTTAGAAATAGGGCAGCATAGAACAAAAATAGAGGAGCTGAGACAACATCTGTTGAGGTGGGGATTTACCACACCAGACAAAAAACATCAAAAAGACCCTCCATTCCTTTGGATGGGTTATGAACTCCATCCTGATAAATGGACAGTACAGCCTATAAAGCTGCCAGAAAAAGAAAGTTGGACTGTCAATGACATACAGAAGTTAGTGGGAAAATTGAATTGGGCAAGTCAGATTTACGCAGGGATTAAAGTAAAGCAACTATGTAAACTCCTTAGGGGGACCAAAGCACTAACAGAAATAATACCAATAACAGAAGAAGCAGAGCTAGAGCTGGCAGAAAACAGGGAAATTCTAAAAGAACCGGTACATGGAGTGTATTATGACCCATCAAAAGACTTAATAGCAGAGCTACAGAAGCAGGGGCAAGGCCAATGGACATATCAGATTTATCAAGAGCCATTTAAAAATCTGAAAACAGGAAAGTATGCAAGAGTGAGGGGTGCCCACACTAATGATGTAAAACAATTAACAGAGGCAGTGCAGAAAATAACCACAGAAAGCATAGTAATATGGGGAAAGACTCCTAAATTTAAACTACCCATACAAAAAGAAACATGGGAAACATGGTGGACAGAGTATTGGCAAGCCACCTGGATTCCTGAGTGGGAGTTTGTCAATACCCCTCCCTTAGTGAAATTATGGTATCAGTTAGAGAAAGAACCCATAGTAGGAGCAGAAACTTTC
-	'D_CD_83_ELI'     CCAATTAGTCCTATTGAAACTGTACCAGTAAAATTAAAGCCAGGAATGGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAGAAAAAATAAAAGCATTAACAGAAATTTGTACAGATATGGAAAAGGAAGGAAAAATTTCAAGAATTGGGCCTGAAAATCCATACAATACTCCAATATTTGCCATAAAGAAAAAAGACAGTACCAAGTGGAGAAAATTAGTAGATTTCAGAGAACTTAATAAGAGAACTCAAGATTTCTGGGAAGTTCAATTAGGAATACCGCATCCTGCAGGGCTGAAAAAGAAAAAATCAGTAACAGTACTGGATGTGGGTGATGCATATTTTTCAGTTCCCTTAGATGAAGATTTTAGGAAATATACCGCCTTTACCATATCTAGTATAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCGGCAATATTCCAAAGTAGCATGACAAAAATCTTAGAGCCCTTTAGAAAACAAAATCCAGAAATGGTTATCTATCAATACATGGATGATTTGTATGTAGGATCTGACTTAGAAATAGGGCAGCATAGGACAAAAATAGAGAAATTAAGAGAACATCTATTGAGGTGGGGATTTACCAGACCAGATAAAAAACATCAGAAAGAACCCCCATTTCTTTGGATGGGTTATGAACTCCATCCTGATAAATGGACAGTACAGTCTATAAAACTGCCAGAAAAGGAGAGCTGGACTGTCAATGATATACAGAACTTAGTGGAGAGATTAAACTGGGCAAGCCAGATTTATCCAGGAATTAAAGTAAGACAATTATGTAAACTCCTTAGGGGAACCAAAGCACTAACAGAAGTAATACCACTAACAGAAGAAGCAGAATTAGAACTGGCAGAAAACAGGGAAATTTTAAAAGAACCAGTACATGGAGTGTATTATGACCCATCAAAAGACTTAATAGCAGAAATACAGAAACAAGGGCACGGCCAATGGACATACCAAATTTATCAAGAACCATTTAAAAATCTGAAAACAGGAAAGTATGCAAGAATGAGGGGTGCCCACACTAATGATGTAAAGCAATTAGCAGAGGCAGTGCAAAGAATATCCACAGAAAGCATAGTGATATGGGGAAGGACTCCTAAATTTAGACTACCCATACAAAAGGAAACATGGGAAACATGGTGGGCAGAGTATTGGCAAGCCACTTGGATTCCTGAGTGGGAATTTGTCAATACCCCTCCTTTAGTAAAATTATGGTACCAGTTAGAGAAGGAACCCATAATAGGAGCAGAAACTTTC
-	'D_CD_83_NDK'     CCAATTAGTCCTATTGAAACTGTACCAGTAAAATTAAAGCCAGGAATGGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAGAAAAAATAAAAGCATTAACAGAAATTTGTACAGAAATGGAAAAGGAAGGAAAAATTTCAAGAATTGGGCCTGAAAATCCATATAATACTCCAATATTTGCCATAAAGAAAAAAGACAGTACCAAGTGGAGAAAATTAGTAGATTTCAGAGAACTTAATAAGAGAACTCAAGATTTCTGGGAGGTTCAATTAGGAATACCGCATCCTGCAGGGCTGAAAAAGAAAAAATCAGTAACAGTACTGGATGTGGGTGATGCATATTTCTCAGTTCCCTTAGATGAAGATTTTAGGAAATATACCGCATTTACCATACCTAGTATAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTCCCACAGGGATGGAAAGGATCACCGGCAATATTCCAAAGTAGCATGACAAAAATCTTAGAGCCCTTTAGAAAACAAAATCCAGAAATAGTTATCTATCAATACATGGATGATTTGTATGTAGGATCTGACTTAGAAATAGGGCAGCATAGAACAAAAATAGAGGAATTAAGAGAACATCTATTGAGGTGGGGATTTACCACACCAGATAAAAAACATCAGAAAGAACCTCCATTTCTTTGGATGGGTTATGAACTCCATCCTGATAAATGGACAGTACAGCCTATAAACCTGCCAGAAAAAGAAAGCTGGACTGTCAATGATATACAGAAGTTAGTGGGGAAATTAAACTGGGCAAGCCAGATTTATGCAGGAATTAAAGTAAAGCAATTATGTAAACTCCTTAGGGGAACCAAAGCACTAACAGAAGTAGTACCACTAACAGAAGAAGCAGAATTAGAACTGGCAGAAAACAGGGAAATTCTAAAAGAACCAGTACATGGAGTGTATTATGACCCATCAAAAGACTTAATAGCAGAACTACAGAAACAAGGGGACGGCCAATGGACATACCAAATTTATCAAGAACCATTTAAAAATCTAAAAACAGGAAAGTATGCAAGAACGAGGGGTGCCCACACTAATGATGTAAAACAATTAACAGAGGCAGTGCAAAAAATAGCCACAGAAAGCATAGTGATATGGGGAAAGACTCCTAAATTTAAACTACCCATACAAAAGGAAACATGGGAAACATGGTGGATAGAGTATTGGCAAGCCACCTGGATTCCTGAGTGGGAATTTGTCAATACCCCTCCTTTAGTAAAATTATGGTACCAGTTAGAGAAGGAACCCATAATAGGAGCAGAAACTTTC
-	'D_CD_84_84ZR085' CCAATTAGTCCTATTGAAACTGTACCAGTAAAATTAAAGCCAGGAATGGATGGCCCAAAAGTTAAACAATGGCCGTTGACAGAAGAAAAAATAAAAGCATTAACAGAAATTTGTACAGATATGGAAAAGGAAGGAAAAATTTCAAGAATTGGGCCTGAAAATCCATACAATACTCCAATATTTGCCATAAAGAAAAAAGACAGTACTAAGTGGAGAAAATTAGTAGATTTCAGAGAACTTAATAAGAGAACTCAAGACTTCTGGGAAGTTCAATTAGGGATACCACATCCTGCAGGATTAAAGAAGAAAAAGTCAATAACAGTACTGGATGTGGGCGATGCATATTTTTCAATTCCCTTATGTGAAGACTTTAGGAAGTACACTGCATTTACCATACCTAGTATAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTACTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGATAAAAATCTTAGAGCCCTTTAGAAAACAAAATCCAGAAGTAGTTATCTATCAATACATGGATGATTTGTATGTAGGATCTGATTTAGAAATAGGACAGCATAGAGCAAAAATAGAGAAATTAAGAGAACATCTGTTGAGGTGGGGGCTTACCACACCAGACAAAAAACATCAGAAAGAACCTCCATTTCTTTGGATGGGTTATGAACTCCATCCTGATAAGTGGACAGTACAGTCTATAACACTGCCAGAGAAAGAAAGCTGGACTGTCAATGATATACAGAAGTTAGTGGGAAAATTAAATTGGGCAAGCCAGATTTATCCAGGAATTAAAGTAAAGCAATTATGTAAACTCCTTAGGGGAACCAAGGCACTAACAGAGGTAATACCACTAACAGAAGAAGCAGAATTAGAACTGGCAGAAAACAGGGAGATTCTAAAGGAACCAATGCATGGAGTGTATTATGACCCATCAAAAGACTTAATAGCAGAATTACAGAAACAAGGGCAAGGTCAATGGACATATCAAATTTATCAAGAACCATTTAAAAATCTGAAAACAGGAAAGTATGCAAGAATGAGGGGTGCCCACACTAATGATGTAAAACAGTTAACAGAGGCAGTGCAAAAAATAGCCATAGAAAGCATAGTGATATGGGGAAAGACTCCTAAATTTAGACTACCCATACAAAAGGAAACATGGGAAACATGGTGGATAGACTATTGGCAAGCCACCTGGATTCCTGAGTGGGAATTTGTCAATACCCCTCCTTTAGTAAAATTATGGTACCAGTTAGAGAAGGAACCCATAATAGGAGCAGAAACTTTC
-	'D_UG_94_94UG114' CCAATTAGTCCTATTGAAACTGTACCAGTAAAATTAAAGCCAGGGATGGATGGCCCAAAAGTTAAACAATGGCCGTTGACAGAAGAAAAAATAAAAGCACTAATAGAAATTTGTTCAGAACTAGAAAAGGAAGGAAAAATTTCAAAAATTGGGCCTGAAAACCCATACAATACTCCAATATTTGCCATAAAGAAAAAAGACAGTACTAAGTGGAGAAAATTAGTAGATTTCAGAGAACTTAATAAGAGAACTCAAGACTTTTGGGAAGTTCAACTAGGAATACCACATCCTGCAGGGCTAAAAAAGAAAAAATCAGTAACAGTACTGGATGTGGGTGACGCATATTTTTCAGTTCCCTTACATGAAGACTTTAGAAAATATACCGCATTCACCATACCTAGTACAAACAATGAGACACCAGGAATTAGATATCAGTACAATGTGCTTCCACAAGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATCTTAGAACCTTTTAGAAAACAAAATCCAGAAATGATTATCTATCAATACATGGATGATTTGTATGTAGGATCTGACTTAGAAATAGGGCAGCATAGAATAAAAATAGAGGAATTAAGGGGACACCTCTTGAAGTGGGGATTTACCACACCAGACAAAAAGTATCAGAAAGAACCCCCATTTCTTTGGATGGGTTATGAACTCCATCCTGATAAGTGGACAGTACAGCCTATACATCTGCCAGAAAAGGAAAGCTGGACTGTCAATGATATACAGAAGTTAGTGGGAAAATTAAATTGGGCAAGCCAGATTTATCCAGGAATTAAAGTAAGACAATTATGCAAATGCCTTAGGGGAGCCAAAGCACTGACAGAAGTAATACCACTGACAGCAGAAGCAGAATTAGAACTGGCAGAAAACAGGGAAATACTAAAAGAACCAGTACATGGAGCGTATTATGACCCATCAAAAGACTTAATAGCAGAAATACAGAAACAAGGGCAAGATCAATGGACATATCAAATATATCAAGAACAATATAAAAATCTGAAAACAGGAAAGTATGCGAAAATGAGGGGTACCCACACTAATGATGTAAAACAATTAACAGAGGCAGTGCAGAAAATAGCCCAAGAATGTATAGTAATATGGGGAAAGACTCCTAAATTTAGACTACCCATACAAAAGGAAACATGGGAAACATGGTGGACAGAGTATTGGCAGGCCACCTGGATTCCTGAGTGGGAGTATGTCAACACCCCTCCTTTAGTTAAATTATGGTATCAGTTAGAGAAGGAACCCATAGTAGGAGCAGAAACTTTC;
-END;
-
-BEGIN TREES;
-	TREE tree = ((((D_CD_83_ELI,D_CD_83_NDK),D_UG_94_94UG114),D_CD_84_84ZR085),B_US_83_RF,((B_FR_83_HXB2,B_US_86_JRFL),B_US_90_WEAU160{B_US_90_WEAU160_BRANCH}));
-END;
-
-BEGIN HYPHY;
-
-
-global busted.background.bsrel_mixture_aux_0=0.1693698006934513;
-busted.background.bsrel_mixture_aux_0:<1;
-global busted.background.bsrel_mixture_aux_1=0.988107636959172;
-busted.background.bsrel_mixture_aux_1:<1;
-global busted.background.omega1=0.2120937673953722;
-busted.background.omega1:<1;
-global busted.background.omega2=0.1679188282558003;
-busted.background.omega2:<1;
-global busted.background.omega3=13.84252711122189;
-global busted.test.theta_AT=0.08592789487428711;
-global busted.test.theta_CG=0.3252168536335274;
-global busted.test.theta_CT=1.270142771514482;
-global busted.test.theta_AC=0.2087011772321373;
-global busted.test.theta_GT=0.01381611313186033;
-global busted.test.bsrel_mixture_aux_0=0.9533274940567786;
-busted.test.bsrel_mixture_aux_0:<1;
-global busted.test.omega1=0.08367159828032572;
-busted.test.omega1:<1;
-global busted.test.bsrel_mixture_aux_1=0.7963836507940498;
-busted.test.bsrel_mixture_aux_1:<1;
-global busted.test.omega3=34.20463703717275;
-busted.test.omega3:>1;
-busted.test.omega3:<10000000000;
-global busted.test.omega2=0.2493792697064242;
-busted.test.omega2:<1;
-global busted.test.theta_AG:=1;
-global busted.background.theta_AC:=busted.test.theta_AC;
-global busted.background.theta_AG:=1;
-global busted.background.theta_AT:=busted.test.theta_AT;
-global busted.background.theta_CG:=busted.test.theta_CG;
-global busted.background.theta_CT:=busted.test.theta_CT;
-global busted.background.theta_GT:=busted.test.theta_GT;
-busted.background_Q_component_1={61,61};
-busted.background_Q_component_1[0][1]:=0.09717451507454297*t*busted.background.omega1*busted.background.theta_AC;
-busted.background_Q_component_1[0][2]:=0.1963563685387479*t*busted.background.theta_AG;
-busted.background_Q_component_1[0][3]:=0.1989860284705866*t*busted.background.omega1*busted.background.theta_AT;
-busted.background_Q_component_1[0][4]:=0.1818409092376876*t*busted.background.omega1*busted.background.theta_AC;
-busted.background_Q_component_1[0][8]:=0.1563402972714242*t*busted.background.omega1*busted.background.theta_AG;
-busted.background_Q_component_1[0][12]:=0.2361684149931496*t*busted.background.omega1*busted.background.theta_AT;
-busted.background_Q_component_1[0][16]:=0.1712746635706107*t*busted.background.omega1*busted.background.theta_AC;
-busted.background_Q_component_1[0][32]:=0.2567033972679326*t*busted.background.omega1*busted.background.theta_AG;
-busted.background_Q_component_1[1][0]:=0.5074830879161225*t*busted.background.omega1*busted.background.theta_AC;
-busted.background_Q_component_1[1][2]:=0.1963563685387479*t*busted.background.omega1*busted.background.theta_CG;
-busted.background_Q_component_1[1][3]:=0.1989860284705866*t*busted.background.theta_CT;
-busted.background_Q_component_1[1][5]:=0.1818409092376876*t*busted.background.omega1*busted.background.theta_AC;
-busted.background_Q_component_1[1][9]:=0.1563402972714242*t*busted.background.omega1*busted.background.theta_AG;
-busted.background_Q_component_1[1][13]:=0.2361684149931496*t*busted.background.omega1*busted.background.theta_AT;
-busted.background_Q_component_1[1][17]:=0.1712746635706107*t*busted.background.omega1*busted.background.theta_AC;
-busted.background_Q_component_1[1][33]:=0.2567033972679326*t*busted.background.omega1*busted.background.theta_AG;
-busted.background_Q_component_1[1][48]:=0.257146542110382*t*busted.background.omega1*busted.background.theta_AT;
-busted.background_Q_component_1[2][0]:=0.5074830879161225*t*busted.background.theta_AG;
-busted.background_Q_component_1[2][1]:=0.09717451507454297*t*busted.background.omega1*busted.background.theta_CG;
-busted.background_Q_component_1[2][3]:=0.1989860284705866*t*busted.background.omega1*busted.background.theta_GT;
-busted.background_Q_component_1[2][6]:=0.1818409092376876*t*busted.background.omega1*busted.background.theta_AC;
-busted.background_Q_component_1[2][10]:=0.1563402972714242*t*busted.background.omega1*busted.background.theta_AG;
-busted.background_Q_component_1[2][14]:=0.2361684149931496*t*busted.background.omega1*busted.background.theta_AT;
-busted.background_Q_component_1[2][18]:=0.1712746635706107*t*busted.background.omega1*busted.background.theta_AC;
-busted.background_Q_component_1[2][34]:=0.2567033972679326*t*busted.background.omega1*busted.background.theta_AG;
-busted.background_Q_component_1[3][0]:=0.5074830879161225*t*busted.background.omega1*busted.background.theta_AT;
-busted.background_Q_component_1[3][1]:=0.09717451507454297*t*busted.background.theta_CT;
-busted.background_Q_component_1[3][2]:=0.1963563685387479*t*busted.background.omega1*busted.background.theta_GT;
-busted.background_Q_component_1[3][7]:=0.1818409092376876*t*busted.background.omega1*busted.background.theta_AC;
-busted.background_Q_component_1[3][11]:=0.1563402972714242*t*busted.background.omega1*busted.background.theta_AG;
-busted.background_Q_component_1[3][15]:=0.2361684149931496*t*busted.background.omega1*busted.background.theta_AT;
-busted.background_Q_component_1[3][19]:=0.1712746635706107*t*busted.background.omega1*busted.background.theta_AC;
-busted.background_Q_component_1[3][35]:=0.2567033972679326*t*busted.background.omega1*busted.background.theta_AG;
-busted.background_Q_component_1[3][49]:=0.257146542110382*t*busted.background.omega1*busted.background.theta_AT;
-busted.background_Q_component_1[4][0]:=0.4256503784977386*t*busted.background.omega1*busted.background.theta_AC;
-busted.background_Q_component_1[4][5]:=0.09717451507454297*t*busted.background.theta_AC;
-busted.background_Q_component_1[4][6]:=0.1963563685387479*t*busted.background.theta_AG;
-busted.background_Q_component_1[4][7]:=0.1989860284705866*t*busted.background.theta_AT;
-busted.background_Q_component_1[4][8]:=0.1563402972714242*t*busted.background.omega1*busted.background.theta_CG;
-busted.background_Q_component_1[4][12]:=0.2361684149931496*t*busted.background.omega1*busted.background.theta_CT;
-busted.background_Q_component_1[4][20]:=0.1712746635706107*t*busted.background.omega1*busted.background.theta_AC;
-busted.background_Q_component_1[4][36]:=0.2567033972679326*t*busted.background.omega1*busted.background.theta_AG;
-busted.background_Q_component_1[4][50]:=0.257146542110382*t*busted.background.omega1*busted.background.theta_AT;
-busted.background_Q_component_1[5][1]:=0.4256503784977386*t*busted.background.omega1*busted.background.theta_AC;
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-busted.background_Q_component_2[1][48]:=0.257146542110382*t*busted.background.theta_AT*busted.background.omega2;
-busted.background_Q_component_2[2][0]:=0.5074830879161225*t*busted.background.theta_AG;
-busted.background_Q_component_2[2][1]:=0.09717451507454297*t*busted.background.theta_CG*busted.background.omega2;
-busted.background_Q_component_2[2][3]:=0.1989860284705866*t*busted.background.theta_GT*busted.background.omega2;
-busted.background_Q_component_2[2][6]:=0.1818409092376876*t*busted.background.theta_AC*busted.background.omega2;
-busted.background_Q_component_2[2][10]:=0.1563402972714242*t*busted.background.theta_AG*busted.background.omega2;
-busted.background_Q_component_2[2][14]:=0.2361684149931496*t*busted.background.theta_AT*busted.background.omega2;
-busted.background_Q_component_2[2][18]:=0.1712746635706107*t*busted.background.theta_AC*busted.background.omega2;
-busted.background_Q_component_2[2][34]:=0.2567033972679326*t*busted.background.theta_AG*busted.background.omega2;
-busted.background_Q_component_2[3][0]:=0.5074830879161225*t*busted.background.theta_AT*busted.background.omega2;
-busted.background_Q_component_2[3][1]:=0.09717451507454297*t*busted.background.theta_CT;
-busted.background_Q_component_2[3][2]:=0.1963563685387479*t*busted.background.theta_GT*busted.background.omega2;
-busted.background_Q_component_2[3][7]:=0.1818409092376876*t*busted.background.theta_AC*busted.background.omega2;
-busted.background_Q_component_2[3][11]:=0.1563402972714242*t*busted.background.theta_AG*busted.background.omega2;
-busted.background_Q_component_2[3][15]:=0.2361684149931496*t*busted.background.theta_AT*busted.background.omega2;
-busted.background_Q_component_2[3][19]:=0.1712746635706107*t*busted.background.theta_AC*busted.background.omega2;
-busted.background_Q_component_2[3][35]:=0.2567033972679326*t*busted.background.theta_AG*busted.background.omega2;
-busted.background_Q_component_2[3][49]:=0.257146542110382*t*busted.background.theta_AT*busted.background.omega2;
-busted.background_Q_component_2[4][0]:=0.4256503784977386*t*busted.background.theta_AC*busted.background.omega2;
-busted.background_Q_component_2[4][5]:=0.09717451507454297*t*busted.background.theta_AC;
-busted.background_Q_component_2[4][6]:=0.1963563685387479*t*busted.background.theta_AG;
-busted.background_Q_component_2[4][7]:=0.1989860284705866*t*busted.background.theta_AT;
-busted.background_Q_component_2[4][8]:=0.1563402972714242*t*busted.background.theta_CG*busted.background.omega2;
-busted.background_Q_component_2[4][12]:=0.2361684149931496*t*busted.background.theta_CT*busted.background.omega2;
-busted.background_Q_component_2[4][20]:=0.1712746635706107*t*busted.background.theta_AC*busted.background.omega2;
-busted.background_Q_component_2[4][36]:=0.2567033972679326*t*busted.background.theta_AG*busted.background.omega2;
-busted.background_Q_component_2[4][50]:=0.257146542110382*t*busted.background.theta_AT*busted.background.omega2;
-busted.background_Q_component_2[5][1]:=0.4256503784977386*t*busted.background.theta_AC*busted.background.omega2;
-busted.background_Q_component_2[5][4]:=0.5074830879161225*t*busted.background.theta_AC;
-busted.background_Q_component_2[5][6]:=0.1963563685387479*t*busted.background.theta_CG;
-busted.background_Q_component_2[5][7]:=0.1989860284705866*t*busted.background.theta_CT;
-busted.background_Q_component_2[5][9]:=0.1563402972714242*t*busted.background.theta_CG*busted.background.omega2;
-busted.background_Q_component_2[5][13]:=0.2361684149931496*t*busted.background.theta_CT*busted.background.omega2;
-busted.background_Q_component_2[5][21]:=0.1712746635706107*t*busted.background.theta_AC*busted.background.omega2;
-busted.background_Q_component_2[5][37]:=0.2567033972679326*t*busted.background.theta_AG*busted.background.omega2;
-busted.background_Q_component_2[5][51]:=0.257146542110382*t*busted.background.theta_AT*busted.background.omega2;
-busted.background_Q_component_2[6][2]:=0.4256503784977386*t*busted.background.theta_AC*busted.background.omega2;
-busted.background_Q_component_2[6][4]:=0.5074830879161225*t*busted.background.theta_AG;
-busted.background_Q_component_2[6][5]:=0.09717451507454297*t*busted.background.theta_CG;
-busted.background_Q_component_2[6][7]:=0.1989860284705866*t*busted.background.theta_GT;
-busted.background_Q_component_2[6][10]:=0.1563402972714242*t*busted.background.theta_CG*busted.background.omega2;
-busted.background_Q_component_2[6][14]:=0.2361684149931496*t*busted.background.theta_CT*busted.background.omega2;
-busted.background_Q_component_2[6][22]:=0.1712746635706107*t*busted.background.theta_AC*busted.background.omega2;
-busted.background_Q_component_2[6][38]:=0.2567033972679326*t*busted.background.theta_AG*busted.background.omega2;
-busted.background_Q_component_2[6][52]:=0.257146542110382*t*busted.background.theta_AT*busted.background.omega2;
-busted.background_Q_component_2[7][3]:=0.4256503784977386*t*busted.background.theta_AC*busted.background.omega2;
-busted.background_Q_component_2[7][4]:=0.5074830879161225*t*busted.background.theta_AT;
-busted.background_Q_component_2[7][5]:=0.09717451507454297*t*busted.background.theta_CT;
-busted.background_Q_component_2[7][6]:=0.1963563685387479*t*busted.background.theta_GT;
-busted.background_Q_component_2[7][11]:=0.1563402972714242*t*busted.background.theta_CG*busted.background.omega2;
-busted.background_Q_component_2[7][15]:=0.2361684149931496*t*busted.background.theta_CT*busted.background.omega2;
-busted.background_Q_component_2[7][23]:=0.1712746635706107*t*busted.background.theta_AC*busted.background.omega2;
-busted.background_Q_component_2[7][39]:=0.2567033972679326*t*busted.background.theta_AG*busted.background.omega2;
-busted.background_Q_component_2[7][53]:=0.257146542110382*t*busted.background.theta_AT*busted.background.omega2;
-busted.background_Q_component_2[8][0]:=0.4256503784977386*t*busted.background.theta_AG*busted.background.omega2;
-busted.background_Q_component_2[8][4]:=0.1818409092376876*t*busted.background.theta_CG*busted.background.omega2;
-busted.background_Q_component_2[8][9]:=0.09717451507454297*t*busted.background.theta_AC*busted.background.omega2;
-busted.background_Q_component_2[8][10]:=0.1963563685387479*t*busted.background.theta_AG;
-busted.background_Q_component_2[8][11]:=0.1989860284705866*t*busted.background.theta_AT*busted.background.omega2;
-busted.background_Q_component_2[8][12]:=0.2361684149931496*t*busted.background.theta_GT*busted.background.omega2;
-busted.background_Q_component_2[8][24]:=0.1712746635706107*t*busted.background.theta_AC;
-busted.background_Q_component_2[8][40]:=0.2567033972679326*t*busted.background.theta_AG*busted.background.omega2;
-busted.background_Q_component_2[9][1]:=0.4256503784977386*t*busted.background.theta_AG*busted.background.omega2;
-busted.background_Q_component_2[9][5]:=0.1818409092376876*t*busted.background.theta_CG*busted.background.omega2;
-busted.background_Q_component_2[9][8]:=0.5074830879161225*t*busted.background.theta_AC*busted.background.omega2;
-busted.background_Q_component_2[9][10]:=0.1963563685387479*t*busted.background.theta_CG*busted.background.omega2;
-busted.background_Q_component_2[9][11]:=0.1989860284705866*t*busted.background.theta_CT;
-busted.background_Q_component_2[9][13]:=0.2361684149931496*t*busted.background.theta_GT*busted.background.omega2;
-busted.background_Q_component_2[9][25]:=0.1712746635706107*t*busted.background.theta_AC*busted.background.omega2;
-busted.background_Q_component_2[9][41]:=0.2567033972679326*t*busted.background.theta_AG*busted.background.omega2;
-busted.background_Q_component_2[9][54]:=0.257146542110382*t*busted.background.theta_AT*busted.background.omega2;
-busted.background_Q_component_2[10][2]:=0.4256503784977386*t*busted.background.theta_AG*busted.background.omega2;
-busted.background_Q_component_2[10][6]:=0.1818409092376876*t*busted.background.theta_CG*busted.background.omega2;
-busted.background_Q_component_2[10][8]:=0.5074830879161225*t*busted.background.theta_AG;
-busted.background_Q_component_2[10][9]:=0.09717451507454297*t*busted.background.theta_CG*busted.background.omega2;
-busted.background_Q_component_2[10][11]:=0.1989860284705866*t*busted.background.theta_GT*busted.background.omega2;
-busted.background_Q_component_2[10][14]:=0.2361684149931496*t*busted.background.theta_GT*busted.background.omega2;
-busted.background_Q_component_2[10][26]:=0.1712746635706107*t*busted.background.theta_AC;
-busted.background_Q_component_2[10][42]:=0.2567033972679326*t*busted.background.theta_AG*busted.background.omega2;
-busted.background_Q_component_2[10][55]:=0.257146542110382*t*busted.background.theta_AT*busted.background.omega2;
-busted.background_Q_component_2[11][3]:=0.4256503784977386*t*busted.background.theta_AG*busted.background.omega2;
-busted.background_Q_component_2[11][7]:=0.1818409092376876*t*busted.background.theta_CG*busted.background.omega2;
-busted.background_Q_component_2[11][8]:=0.5074830879161225*t*busted.background.theta_AT*busted.background.omega2;
-busted.background_Q_component_2[11][9]:=0.09717451507454297*t*busted.background.theta_CT;
-busted.background_Q_component_2[11][10]:=0.1963563685387479*t*busted.background.theta_GT*busted.background.omega2;
-busted.background_Q_component_2[11][15]:=0.2361684149931496*t*busted.background.theta_GT*busted.background.omega2;
-busted.background_Q_component_2[11][27]:=0.1712746635706107*t*busted.background.theta_AC*busted.background.omega2;
-busted.background_Q_component_2[11][43]:=0.2567033972679326*t*busted.background.theta_AG*busted.background.omega2;
-busted.background_Q_component_2[11][56]:=0.257146542110382*t*busted.background.theta_AT*busted.background.omega2;
-busted.background_Q_component_2[12][0]:=0.4256503784977386*t*busted.background.theta_AT*busted.background.omega2;
-busted.background_Q_component_2[12][4]:=0.1818409092376876*t*busted.background.theta_CT*busted.background.omega2;
-busted.background_Q_component_2[12][8]:=0.1563402972714242*t*busted.background.theta_GT*busted.background.omega2;
-busted.background_Q_component_2[12][13]:=0.09717451507454297*t*busted.background.theta_AC;
-busted.background_Q_component_2[12][14]:=0.1963563685387479*t*busted.background.theta_AG*busted.background.omega2;
-busted.background_Q_component_2[12][15]:=0.1989860284705866*t*busted.background.theta_AT;
-busted.background_Q_component_2[12][28]:=0.1712746635706107*t*busted.background.theta_AC*busted.background.omega2;
-busted.background_Q_component_2[12][44]:=0.2567033972679326*t*busted.background.theta_AG*busted.background.omega2;
-busted.background_Q_component_2[12][57]:=0.257146542110382*t*busted.background.theta_AT*busted.background.omega2;
-busted.background_Q_component_2[13][1]:=0.4256503784977386*t*busted.background.theta_AT*busted.background.omega2;
-busted.background_Q_component_2[13][5]:=0.1818409092376876*t*busted.background.theta_CT*busted.background.omega2;
-busted.background_Q_component_2[13][9]:=0.1563402972714242*t*busted.background.theta_GT*busted.background.omega2;
-busted.background_Q_component_2[13][12]:=0.5074830879161225*t*busted.background.theta_AC;
-busted.background_Q_component_2[13][14]:=0.1963563685387479*t*busted.background.theta_CG*busted.background.omega2;
-busted.background_Q_component_2[13][15]:=0.1989860284705866*t*busted.background.theta_CT;
-busted.background_Q_component_2[13][29]:=0.1712746635706107*t*busted.background.theta_AC*busted.background.omega2;
-busted.background_Q_component_2[13][45]:=0.2567033972679326*t*busted.background.theta_AG*busted.background.omega2;
-busted.background_Q_component_2[13][58]:=0.257146542110382*t*busted.background.theta_AT*busted.background.omega2;
-busted.background_Q_component_2[14][2]:=0.4256503784977386*t*busted.background.theta_AT*busted.background.omega2;
-busted.background_Q_component_2[14][6]:=0.1818409092376876*t*busted.background.theta_CT*busted.background.omega2;
-busted.background_Q_component_2[14][10]:=0.1563402972714242*t*busted.background.theta_GT*busted.background.omega2;
-busted.background_Q_component_2[14][12]:=0.5074830879161225*t*busted.background.theta_AG*busted.background.omega2;
-busted.background_Q_component_2[14][13]:=0.09717451507454297*t*busted.background.theta_CG*busted.background.omega2;
-busted.background_Q_component_2[14][15]:=0.1989860284705866*t*busted.background.theta_GT*busted.background.omega2;
-busted.background_Q_component_2[14][30]:=0.1712746635706107*t*busted.background.theta_AC*busted.background.omega2;
-busted.background_Q_component_2[14][46]:=0.2567033972679326*t*busted.background.theta_AG*busted.background.omega2;
-busted.background_Q_component_2[14][59]:=0.257146542110382*t*busted.background.theta_AT*busted.background.omega2;
-busted.background_Q_component_2[15][3]:=0.4256503784977386*t*busted.background.theta_AT*busted.background.omega2;
-busted.background_Q_component_2[15][7]:=0.1818409092376876*t*busted.background.theta_CT*busted.background.omega2;
-busted.background_Q_component_2[15][11]:=0.1563402972714242*t*busted.background.theta_GT*busted.background.omega2;
-busted.background_Q_component_2[15][12]:=0.5074830879161225*t*busted.background.theta_AT;
-busted.background_Q_component_2[15][13]:=0.09717451507454297*t*busted.background.theta_CT;
-busted.background_Q_component_2[15][14]:=0.1963563685387479*t*busted.background.theta_GT*busted.background.omega2;
-busted.background_Q_component_2[15][31]:=0.1712746635706107*t*busted.background.theta_AC*busted.background.omega2;
-busted.background_Q_component_2[15][47]:=0.2567033972679326*t*busted.background.theta_AG*busted.background.omega2;
-busted.background_Q_component_2[15][60]:=0.257146542110382*t*busted.background.theta_AT*busted.background.omega2;
-busted.background_Q_component_2[16][0]:=0.3148753970510747*t*busted.background.theta_AC*busted.background.omega2;
-busted.background_Q_component_2[16][17]:=0.09717451507454297*t*busted.background.theta_AC*busted.background.omega2;
-busted.background_Q_component_2[16][18]:=0.1963563685387479*t*busted.background.theta_AG;
-busted.background_Q_component_2[16][19]:=0.1989860284705866*t*busted.background.theta_AT*busted.background.omega2;
-busted.background_Q_component_2[16][20]:=0.1818409092376876*t*busted.background.theta_AC*busted.background.omega2;
-busted.background_Q_component_2[16][24]:=0.1563402972714242*t*busted.background.theta_AG*busted.background.omega2;
-busted.background_Q_component_2[16][28]:=0.2361684149931496*t*busted.background.theta_AT*busted.background.omega2;
-busted.background_Q_component_2[16][32]:=0.2567033972679326*t*busted.background.theta_CG*busted.background.omega2;
-busted.background_Q_component_2[17][1]:=0.3148753970510747*t*busted.background.theta_AC*busted.background.omega2;
-busted.background_Q_component_2[17][16]:=0.5074830879161225*t*busted.background.theta_AC*busted.background.omega2;
-busted.background_Q_component_2[17][18]:=0.1963563685387479*t*busted.background.theta_CG*busted.background.omega2;
-busted.background_Q_component_2[17][19]:=0.1989860284705866*t*busted.background.theta_CT;
-busted.background_Q_component_2[17][21]:=0.1818409092376876*t*busted.background.theta_AC*busted.background.omega2;
-busted.background_Q_component_2[17][25]:=0.1563402972714242*t*busted.background.theta_AG*busted.background.omega2;
-busted.background_Q_component_2[17][29]:=0.2361684149931496*t*busted.background.theta_AT*busted.background.omega2;
-busted.background_Q_component_2[17][33]:=0.2567033972679326*t*busted.background.theta_CG*busted.background.omega2;
-busted.background_Q_component_2[17][48]:=0.257146542110382*t*busted.background.theta_CT*busted.background.omega2;
-busted.background_Q_component_2[18][2]:=0.3148753970510747*t*busted.background.theta_AC*busted.background.omega2;
-busted.background_Q_component_2[18][16]:=0.5074830879161225*t*busted.background.theta_AG;
-busted.background_Q_component_2[18][17]:=0.09717451507454297*t*busted.background.theta_CG*busted.background.omega2;
-busted.background_Q_component_2[18][19]:=0.1989860284705866*t*busted.background.theta_GT*busted.background.omega2;
-busted.background_Q_component_2[18][22]:=0.1818409092376876*t*busted.background.theta_AC*busted.background.omega2;
-busted.background_Q_component_2[18][26]:=0.1563402972714242*t*busted.background.theta_AG*busted.background.omega2;
-busted.background_Q_component_2[18][30]:=0.2361684149931496*t*busted.background.theta_AT*busted.background.omega2;
-busted.background_Q_component_2[18][34]:=0.2567033972679326*t*busted.background.theta_CG*busted.background.omega2;
-busted.background_Q_component_2[19][3]:=0.3148753970510747*t*busted.background.theta_AC*busted.background.omega2;
-busted.background_Q_component_2[19][16]:=0.5074830879161225*t*busted.background.theta_AT*busted.background.omega2;
-busted.background_Q_component_2[19][17]:=0.09717451507454297*t*busted.background.theta_CT;
-busted.background_Q_component_2[19][18]:=0.1963563685387479*t*busted.background.theta_GT*busted.background.omega2;
-busted.background_Q_component_2[19][23]:=0.1818409092376876*t*busted.background.theta_AC*busted.background.omega2;
-busted.background_Q_component_2[19][27]:=0.1563402972714242*t*busted.background.theta_AG*busted.background.omega2;
-busted.background_Q_component_2[19][31]:=0.2361684149931496*t*busted.background.theta_AT*busted.background.omega2;
-busted.background_Q_component_2[19][35]:=0.2567033972679326*t*busted.background.theta_CG*busted.background.omega2;
-busted.background_Q_component_2[19][49]:=0.257146542110382*t*busted.background.theta_CT*busted.background.omega2;
-busted.background_Q_component_2[20][4]:=0.3148753970510747*t*busted.background.theta_AC*busted.background.omega2;
-busted.background_Q_component_2[20][16]:=0.4256503784977386*t*busted.background.theta_AC*busted.background.omega2;
-busted.background_Q_component_2[20][21]:=0.09717451507454297*t*busted.background.theta_AC;
-busted.background_Q_component_2[20][22]:=0.1963563685387479*t*busted.background.theta_AG;
-busted.background_Q_component_2[20][23]:=0.1989860284705866*t*busted.background.theta_AT;
-busted.background_Q_component_2[20][24]:=0.1563402972714242*t*busted.background.theta_CG*busted.background.omega2;
-busted.background_Q_component_2[20][28]:=0.2361684149931496*t*busted.background.theta_CT*busted.background.omega2;
-busted.background_Q_component_2[20][36]:=0.2567033972679326*t*busted.background.theta_CG*busted.background.omega2;
-busted.background_Q_component_2[20][50]:=0.257146542110382*t*busted.background.theta_CT*busted.background.omega2;
-busted.background_Q_component_2[21][5]:=0.3148753970510747*t*busted.background.theta_AC*busted.background.omega2;
-busted.background_Q_component_2[21][17]:=0.4256503784977386*t*busted.background.theta_AC*busted.background.omega2;
-busted.background_Q_component_2[21][20]:=0.5074830879161225*t*busted.background.theta_AC;
-busted.background_Q_component_2[21][22]:=0.1963563685387479*t*busted.background.theta_CG;
-busted.background_Q_component_2[21][23]:=0.1989860284705866*t*busted.background.theta_CT;
-busted.background_Q_component_2[21][25]:=0.1563402972714242*t*busted.background.theta_CG*busted.background.omega2;
-busted.background_Q_component_2[21][29]:=0.2361684149931496*t*busted.background.theta_CT*busted.background.omega2;
-busted.background_Q_component_2[21][37]:=0.2567033972679326*t*busted.background.theta_CG*busted.background.omega2;
-busted.background_Q_component_2[21][51]:=0.257146542110382*t*busted.background.theta_CT*busted.background.omega2;
-busted.background_Q_component_2[22][6]:=0.3148753970510747*t*busted.background.theta_AC*busted.background.omega2;
-busted.background_Q_component_2[22][18]:=0.4256503784977386*t*busted.background.theta_AC*busted.background.omega2;
-busted.background_Q_component_2[22][20]:=0.5074830879161225*t*busted.background.theta_AG;
-busted.background_Q_component_2[22][21]:=0.09717451507454297*t*busted.background.theta_CG;
-busted.background_Q_component_2[22][23]:=0.1989860284705866*t*busted.background.theta_GT;
-busted.background_Q_component_2[22][26]:=0.1563402972714242*t*busted.background.theta_CG*busted.background.omega2;
-busted.background_Q_component_2[22][30]:=0.2361684149931496*t*busted.background.theta_CT*busted.background.omega2;
-busted.background_Q_component_2[22][38]:=0.2567033972679326*t*busted.background.theta_CG*busted.background.omega2;
-busted.background_Q_component_2[22][52]:=0.257146542110382*t*busted.background.theta_CT*busted.background.omega2;
-busted.background_Q_component_2[23][7]:=0.3148753970510747*t*busted.background.theta_AC*busted.background.omega2;
-busted.background_Q_component_2[23][19]:=0.4256503784977386*t*busted.background.theta_AC*busted.background.omega2;
-busted.background_Q_component_2[23][20]:=0.5074830879161225*t*busted.background.theta_AT;
-busted.background_Q_component_2[23][21]:=0.09717451507454297*t*busted.background.theta_CT;
-busted.background_Q_component_2[23][22]:=0.1963563685387479*t*busted.background.theta_GT;
-busted.background_Q_component_2[23][27]:=0.1563402972714242*t*busted.background.theta_CG*busted.background.omega2;
-busted.background_Q_component_2[23][31]:=0.2361684149931496*t*busted.background.theta_CT*busted.background.omega2;
-busted.background_Q_component_2[23][39]:=0.2567033972679326*t*busted.background.theta_CG*busted.background.omega2;
-busted.background_Q_component_2[23][53]:=0.257146542110382*t*busted.background.theta_CT*busted.background.omega2;
-busted.background_Q_component_2[24][8]:=0.3148753970510747*t*busted.background.theta_AC;
-busted.background_Q_component_2[24][16]:=0.4256503784977386*t*busted.background.theta_AG*busted.background.omega2;
-busted.background_Q_component_2[24][20]:=0.1818409092376876*t*busted.background.theta_CG*busted.background.omega2;
-busted.background_Q_component_2[24][25]:=0.09717451507454297*t*busted.background.theta_AC;
-busted.background_Q_component_2[24][26]:=0.1963563685387479*t*busted.background.theta_AG;
-busted.background_Q_component_2[24][27]:=0.1989860284705866*t*busted.background.theta_AT;
-busted.background_Q_component_2[24][28]:=0.2361684149931496*t*busted.background.theta_GT*busted.background.omega2;
-busted.background_Q_component_2[24][40]:=0.2567033972679326*t*busted.background.theta_CG*busted.background.omega2;
-busted.background_Q_component_2[25][9]:=0.3148753970510747*t*busted.background.theta_AC*busted.background.omega2;
-busted.background_Q_component_2[25][17]:=0.4256503784977386*t*busted.background.theta_AG*busted.background.omega2;
-busted.background_Q_component_2[25][21]:=0.1818409092376876*t*busted.background.theta_CG*busted.background.omega2;
-busted.background_Q_component_2[25][24]:=0.5074830879161225*t*busted.background.theta_AC;
-busted.background_Q_component_2[25][26]:=0.1963563685387479*t*busted.background.theta_CG;
-busted.background_Q_component_2[25][27]:=0.1989860284705866*t*busted.background.theta_CT;
-busted.background_Q_component_2[25][29]:=0.2361684149931496*t*busted.background.theta_GT*busted.background.omega2;
-busted.background_Q_component_2[25][41]:=0.2567033972679326*t*busted.background.theta_CG*busted.background.omega2;
-busted.background_Q_component_2[25][54]:=0.257146542110382*t*busted.background.theta_CT*busted.background.omega2;
-busted.background_Q_component_2[26][10]:=0.3148753970510747*t*busted.background.theta_AC;
-busted.background_Q_component_2[26][18]:=0.4256503784977386*t*busted.background.theta_AG*busted.background.omega2;
-busted.background_Q_component_2[26][22]:=0.1818409092376876*t*busted.background.theta_CG*busted.background.omega2;
-busted.background_Q_component_2[26][24]:=0.5074830879161225*t*busted.background.theta_AG;
-busted.background_Q_component_2[26][25]:=0.09717451507454297*t*busted.background.theta_CG;
-busted.background_Q_component_2[26][27]:=0.1989860284705866*t*busted.background.theta_GT;
-busted.background_Q_component_2[26][30]:=0.2361684149931496*t*busted.background.theta_GT*busted.background.omega2;
-busted.background_Q_component_2[26][42]:=0.2567033972679326*t*busted.background.theta_CG*busted.background.omega2;
-busted.background_Q_component_2[26][55]:=0.257146542110382*t*busted.background.theta_CT*busted.background.omega2;
-busted.background_Q_component_2[27][11]:=0.3148753970510747*t*busted.background.theta_AC*busted.background.omega2;
-busted.background_Q_component_2[27][19]:=0.4256503784977386*t*busted.background.theta_AG*busted.background.omega2;
-busted.background_Q_component_2[27][23]:=0.1818409092376876*t*busted.background.theta_CG*busted.background.omega2;
-busted.background_Q_component_2[27][24]:=0.5074830879161225*t*busted.background.theta_AT;
-busted.background_Q_component_2[27][25]:=0.09717451507454297*t*busted.background.theta_CT;
-busted.background_Q_component_2[27][26]:=0.1963563685387479*t*busted.background.theta_GT;
-busted.background_Q_component_2[27][31]:=0.2361684149931496*t*busted.background.theta_GT*busted.background.omega2;
-busted.background_Q_component_2[27][43]:=0.2567033972679326*t*busted.background.theta_CG*busted.background.omega2;
-busted.background_Q_component_2[27][56]:=0.257146542110382*t*busted.background.theta_CT*busted.background.omega2;
-busted.background_Q_component_2[28][12]:=0.3148753970510747*t*busted.background.theta_AC*busted.background.omega2;
-busted.background_Q_component_2[28][16]:=0.4256503784977386*t*busted.background.theta_AT*busted.background.omega2;
-busted.background_Q_component_2[28][20]:=0.1818409092376876*t*busted.background.theta_CT*busted.background.omega2;
-busted.background_Q_component_2[28][24]:=0.1563402972714242*t*busted.background.theta_GT*busted.background.omega2;
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-busted.background_Q_component_2[28][30]:=0.1963563685387479*t*busted.background.theta_AG;
-busted.background_Q_component_2[28][31]:=0.1989860284705866*t*busted.background.theta_AT;
-busted.background_Q_component_2[28][44]:=0.2567033972679326*t*busted.background.theta_CG*busted.background.omega2;
-busted.background_Q_component_2[28][57]:=0.257146542110382*t*busted.background.theta_CT;
-busted.background_Q_component_2[29][13]:=0.3148753970510747*t*busted.background.theta_AC*busted.background.omega2;
-busted.background_Q_component_2[29][17]:=0.4256503784977386*t*busted.background.theta_AT*busted.background.omega2;
-busted.background_Q_component_2[29][21]:=0.1818409092376876*t*busted.background.theta_CT*busted.background.omega2;
-busted.background_Q_component_2[29][25]:=0.1563402972714242*t*busted.background.theta_GT*busted.background.omega2;
-busted.background_Q_component_2[29][28]:=0.5074830879161225*t*busted.background.theta_AC;
-busted.background_Q_component_2[29][30]:=0.1963563685387479*t*busted.background.theta_CG;
-busted.background_Q_component_2[29][31]:=0.1989860284705866*t*busted.background.theta_CT;
-busted.background_Q_component_2[29][45]:=0.2567033972679326*t*busted.background.theta_CG*busted.background.omega2;
-busted.background_Q_component_2[29][58]:=0.257146542110382*t*busted.background.theta_CT*busted.background.omega2;
-busted.background_Q_component_2[30][14]:=0.3148753970510747*t*busted.background.theta_AC*busted.background.omega2;
-busted.background_Q_component_2[30][18]:=0.4256503784977386*t*busted.background.theta_AT*busted.background.omega2;
-busted.background_Q_component_2[30][22]:=0.1818409092376876*t*busted.background.theta_CT*busted.background.omega2;
-busted.background_Q_component_2[30][26]:=0.1563402972714242*t*busted.background.theta_GT*busted.background.omega2;
-busted.background_Q_component_2[30][28]:=0.5074830879161225*t*busted.background.theta_AG;
-busted.background_Q_component_2[30][29]:=0.09717451507454297*t*busted.background.theta_CG;
-busted.background_Q_component_2[30][31]:=0.1989860284705866*t*busted.background.theta_GT;
-busted.background_Q_component_2[30][46]:=0.2567033972679326*t*busted.background.theta_CG*busted.background.omega2;
-busted.background_Q_component_2[30][59]:=0.257146542110382*t*busted.background.theta_CT;
-busted.background_Q_component_2[31][15]:=0.3148753970510747*t*busted.background.theta_AC*busted.background.omega2;
-busted.background_Q_component_2[31][19]:=0.4256503784977386*t*busted.background.theta_AT*busted.background.omega2;
-busted.background_Q_component_2[31][23]:=0.1818409092376876*t*busted.background.theta_CT*busted.background.omega2;
-busted.background_Q_component_2[31][27]:=0.1563402972714242*t*busted.background.theta_GT*busted.background.omega2;
-busted.background_Q_component_2[31][28]:=0.5074830879161225*t*busted.background.theta_AT;
-busted.background_Q_component_2[31][29]:=0.09717451507454297*t*busted.background.theta_CT;
-busted.background_Q_component_2[31][30]:=0.1963563685387479*t*busted.background.theta_GT;
-busted.background_Q_component_2[31][47]:=0.2567033972679326*t*busted.background.theta_CG*busted.background.omega2;
-busted.background_Q_component_2[31][60]:=0.257146542110382*t*busted.background.theta_CT*busted.background.omega2;
-busted.background_Q_component_2[32][0]:=0.3148753970510747*t*busted.background.theta_AG*busted.background.omega2;
-busted.background_Q_component_2[32][16]:=0.1712746635706107*t*busted.background.theta_CG*busted.background.omega2;
-busted.background_Q_component_2[32][33]:=0.09717451507454297*t*busted.background.theta_AC*busted.background.omega2;
-busted.background_Q_component_2[32][34]:=0.1963563685387479*t*busted.background.theta_AG;
-busted.background_Q_component_2[32][35]:=0.1989860284705866*t*busted.background.theta_AT*busted.background.omega2;
-busted.background_Q_component_2[32][36]:=0.1818409092376876*t*busted.background.theta_AC*busted.background.omega2;
-busted.background_Q_component_2[32][40]:=0.1563402972714242*t*busted.background.theta_AG*busted.background.omega2;
-busted.background_Q_component_2[32][44]:=0.2361684149931496*t*busted.background.theta_AT*busted.background.omega2;
-busted.background_Q_component_2[33][1]:=0.3148753970510747*t*busted.background.theta_AG*busted.background.omega2;
-busted.background_Q_component_2[33][17]:=0.1712746635706107*t*busted.background.theta_CG*busted.background.omega2;
-busted.background_Q_component_2[33][32]:=0.5074830879161225*t*busted.background.theta_AC*busted.background.omega2;
-busted.background_Q_component_2[33][34]:=0.1963563685387479*t*busted.background.theta_CG*busted.background.omega2;
-busted.background_Q_component_2[33][35]:=0.1989860284705866*t*busted.background.theta_CT;
-busted.background_Q_component_2[33][37]:=0.1818409092376876*t*busted.background.theta_AC*busted.background.omega2;
-busted.background_Q_component_2[33][41]:=0.1563402972714242*t*busted.background.theta_AG*busted.background.omega2;
-busted.background_Q_component_2[33][45]:=0.2361684149931496*t*busted.background.theta_AT*busted.background.omega2;
-busted.background_Q_component_2[33][48]:=0.257146542110382*t*busted.background.theta_GT*busted.background.omega2;
-busted.background_Q_component_2[34][2]:=0.3148753970510747*t*busted.background.theta_AG*busted.background.omega2;
-busted.background_Q_component_2[34][18]:=0.1712746635706107*t*busted.background.theta_CG*busted.background.omega2;
-busted.background_Q_component_2[34][32]:=0.5074830879161225*t*busted.background.theta_AG;
-busted.background_Q_component_2[34][33]:=0.09717451507454297*t*busted.background.theta_CG*busted.background.omega2;
-busted.background_Q_component_2[34][35]:=0.1989860284705866*t*busted.background.theta_GT*busted.background.omega2;
-busted.background_Q_component_2[34][38]:=0.1818409092376876*t*busted.background.theta_AC*busted.background.omega2;
-busted.background_Q_component_2[34][42]:=0.1563402972714242*t*busted.background.theta_AG*busted.background.omega2;
-busted.background_Q_component_2[34][46]:=0.2361684149931496*t*busted.background.theta_AT*busted.background.omega2;
-busted.background_Q_component_2[35][3]:=0.3148753970510747*t*busted.background.theta_AG*busted.background.omega2;
-busted.background_Q_component_2[35][19]:=0.1712746635706107*t*busted.background.theta_CG*busted.background.omega2;
-busted.background_Q_component_2[35][32]:=0.5074830879161225*t*busted.background.theta_AT*busted.background.omega2;
-busted.background_Q_component_2[35][33]:=0.09717451507454297*t*busted.background.theta_CT;
-busted.background_Q_component_2[35][34]:=0.1963563685387479*t*busted.background.theta_GT*busted.background.omega2;
-busted.background_Q_component_2[35][39]:=0.1818409092376876*t*busted.background.theta_AC*busted.background.omega2;
-busted.background_Q_component_2[35][43]:=0.1563402972714242*t*busted.background.theta_AG*busted.background.omega2;
-busted.background_Q_component_2[35][47]:=0.2361684149931496*t*busted.background.theta_AT*busted.background.omega2;
-busted.background_Q_component_2[35][49]:=0.257146542110382*t*busted.background.theta_GT*busted.background.omega2;
-busted.background_Q_component_2[36][4]:=0.3148753970510747*t*busted.background.theta_AG*busted.background.omega2;
-busted.background_Q_component_2[36][20]:=0.1712746635706107*t*busted.background.theta_CG*busted.background.omega2;
-busted.background_Q_component_2[36][32]:=0.4256503784977386*t*busted.background.theta_AC*busted.background.omega2;
-busted.background_Q_component_2[36][37]:=0.09717451507454297*t*busted.background.theta_AC;
-busted.background_Q_component_2[36][38]:=0.1963563685387479*t*busted.background.theta_AG;
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-busted.background_Q_component_2[36][40]:=0.1563402972714242*t*busted.background.theta_CG*busted.background.omega2;
-busted.background_Q_component_2[36][44]:=0.2361684149931496*t*busted.background.theta_CT*busted.background.omega2;
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-busted.background_Q_component_2[37][33]:=0.4256503784977386*t*busted.background.theta_AC*busted.background.omega2;
-busted.background_Q_component_2[37][36]:=0.5074830879161225*t*busted.background.theta_AC;
-busted.background_Q_component_2[37][38]:=0.1963563685387479*t*busted.background.theta_CG;
-busted.background_Q_component_2[37][39]:=0.1989860284705866*t*busted.background.theta_CT;
-busted.background_Q_component_2[37][41]:=0.1563402972714242*t*busted.background.theta_CG*busted.background.omega2;
-busted.background_Q_component_2[37][45]:=0.2361684149931496*t*busted.background.theta_CT*busted.background.omega2;
-busted.background_Q_component_2[37][51]:=0.257146542110382*t*busted.background.theta_GT*busted.background.omega2;
-busted.background_Q_component_2[38][6]:=0.3148753970510747*t*busted.background.theta_AG*busted.background.omega2;
-busted.background_Q_component_2[38][22]:=0.1712746635706107*t*busted.background.theta_CG*busted.background.omega2;
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-busted.background_Q_component_2[38][36]:=0.5074830879161225*t*busted.background.theta_AG;
-busted.background_Q_component_2[38][37]:=0.09717451507454297*t*busted.background.theta_CG;
-busted.background_Q_component_2[38][39]:=0.1989860284705866*t*busted.background.theta_GT;
-busted.background_Q_component_2[38][42]:=0.1563402972714242*t*busted.background.theta_CG*busted.background.omega2;
-busted.background_Q_component_2[38][46]:=0.2361684149931496*t*busted.background.theta_CT*busted.background.omega2;
-busted.background_Q_component_2[38][52]:=0.257146542110382*t*busted.background.theta_GT*busted.background.omega2;
-busted.background_Q_component_2[39][7]:=0.3148753970510747*t*busted.background.theta_AG*busted.background.omega2;
-busted.background_Q_component_2[39][23]:=0.1712746635706107*t*busted.background.theta_CG*busted.background.omega2;
-busted.background_Q_component_2[39][35]:=0.4256503784977386*t*busted.background.theta_AC*busted.background.omega2;
-busted.background_Q_component_2[39][36]:=0.5074830879161225*t*busted.background.theta_AT;
-busted.background_Q_component_2[39][37]:=0.09717451507454297*t*busted.background.theta_CT;
-busted.background_Q_component_2[39][38]:=0.1963563685387479*t*busted.background.theta_GT;
-busted.background_Q_component_2[39][43]:=0.1563402972714242*t*busted.background.theta_CG*busted.background.omega2;
-busted.background_Q_component_2[39][47]:=0.2361684149931496*t*busted.background.theta_CT*busted.background.omega2;
-busted.background_Q_component_2[39][53]:=0.257146542110382*t*busted.background.theta_GT*busted.background.omega2;
-busted.background_Q_component_2[40][8]:=0.3148753970510747*t*busted.background.theta_AG*busted.background.omega2;
-busted.background_Q_component_2[40][24]:=0.1712746635706107*t*busted.background.theta_CG*busted.background.omega2;
-busted.background_Q_component_2[40][32]:=0.4256503784977386*t*busted.background.theta_AG*busted.background.omega2;
-busted.background_Q_component_2[40][36]:=0.1818409092376876*t*busted.background.theta_CG*busted.background.omega2;
-busted.background_Q_component_2[40][41]:=0.09717451507454297*t*busted.background.theta_AC;
-busted.background_Q_component_2[40][42]:=0.1963563685387479*t*busted.background.theta_AG;
-busted.background_Q_component_2[40][43]:=0.1989860284705866*t*busted.background.theta_AT;
-busted.background_Q_component_2[40][44]:=0.2361684149931496*t*busted.background.theta_GT*busted.background.omega2;
-busted.background_Q_component_2[41][9]:=0.3148753970510747*t*busted.background.theta_AG*busted.background.omega2;
-busted.background_Q_component_2[41][25]:=0.1712746635706107*t*busted.background.theta_CG*busted.background.omega2;
-busted.background_Q_component_2[41][33]:=0.4256503784977386*t*busted.background.theta_AG*busted.background.omega2;
-busted.background_Q_component_2[41][37]:=0.1818409092376876*t*busted.background.theta_CG*busted.background.omega2;
-busted.background_Q_component_2[41][40]:=0.5074830879161225*t*busted.background.theta_AC;
-busted.background_Q_component_2[41][42]:=0.1963563685387479*t*busted.background.theta_CG;
-busted.background_Q_component_2[41][43]:=0.1989860284705866*t*busted.background.theta_CT;
-busted.background_Q_component_2[41][45]:=0.2361684149931496*t*busted.background.theta_GT*busted.background.omega2;
-busted.background_Q_component_2[41][54]:=0.257146542110382*t*busted.background.theta_GT*busted.background.omega2;
-busted.background_Q_component_2[42][10]:=0.3148753970510747*t*busted.background.theta_AG*busted.background.omega2;
-busted.background_Q_component_2[42][26]:=0.1712746635706107*t*busted.background.theta_CG*busted.background.omega2;
-busted.background_Q_component_2[42][34]:=0.4256503784977386*t*busted.background.theta_AG*busted.background.omega2;
-busted.background_Q_component_2[42][38]:=0.1818409092376876*t*busted.background.theta_CG*busted.background.omega2;
-busted.background_Q_component_2[42][40]:=0.5074830879161225*t*busted.background.theta_AG;
-busted.background_Q_component_2[42][41]:=0.09717451507454297*t*busted.background.theta_CG;
-busted.background_Q_component_2[42][43]:=0.1989860284705866*t*busted.background.theta_GT;
-busted.background_Q_component_2[42][46]:=0.2361684149931496*t*busted.background.theta_GT*busted.background.omega2;
-busted.background_Q_component_2[42][55]:=0.257146542110382*t*busted.background.theta_GT*busted.background.omega2;
-busted.background_Q_component_2[43][11]:=0.3148753970510747*t*busted.background.theta_AG*busted.background.omega2;
-busted.background_Q_component_2[43][27]:=0.1712746635706107*t*busted.background.theta_CG*busted.background.omega2;
-busted.background_Q_component_2[43][35]:=0.4256503784977386*t*busted.background.theta_AG*busted.background.omega2;
-busted.background_Q_component_2[43][39]:=0.1818409092376876*t*busted.background.theta_CG*busted.background.omega2;
-busted.background_Q_component_2[43][40]:=0.5074830879161225*t*busted.background.theta_AT;
-busted.background_Q_component_2[43][41]:=0.09717451507454297*t*busted.background.theta_CT;
-busted.background_Q_component_2[43][42]:=0.1963563685387479*t*busted.background.theta_GT;
-busted.background_Q_component_2[43][47]:=0.2361684149931496*t*busted.background.theta_GT*busted.background.omega2;
-busted.background_Q_component_2[43][56]:=0.257146542110382*t*busted.background.theta_GT*busted.background.omega2;
-busted.background_Q_component_2[44][12]:=0.3148753970510747*t*busted.background.theta_AG*busted.background.omega2;
-busted.background_Q_component_2[44][28]:=0.1712746635706107*t*busted.background.theta_CG*busted.background.omega2;
-busted.background_Q_component_2[44][32]:=0.4256503784977386*t*busted.background.theta_AT*busted.background.omega2;
-busted.background_Q_component_2[44][36]:=0.1818409092376876*t*busted.background.theta_CT*busted.background.omega2;
-busted.background_Q_component_2[44][40]:=0.1563402972714242*t*busted.background.theta_GT*busted.background.omega2;
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-busted.background_Q_component_2[44][46]:=0.1963563685387479*t*busted.background.theta_AG;
-busted.background_Q_component_2[44][47]:=0.1989860284705866*t*busted.background.theta_AT;
-busted.background_Q_component_2[44][57]:=0.257146542110382*t*busted.background.theta_GT*busted.background.omega2;
-busted.background_Q_component_2[45][13]:=0.3148753970510747*t*busted.background.theta_AG*busted.background.omega2;
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-busted.background_Q_component_2[45][46]:=0.1963563685387479*t*busted.background.theta_CG;
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-busted.background_Q_component_3[42][43]:=0.1989860284705866*t*busted.background.theta_GT;
-busted.background_Q_component_3[42][46]:=0.2361684149931496*t*busted.background.theta_GT*busted.background.omega3;
-busted.background_Q_component_3[42][55]:=0.257146542110382*t*busted.background.theta_GT*busted.background.omega3;
-busted.background_Q_component_3[43][11]:=0.3148753970510747*t*busted.background.theta_AG*busted.background.omega3;
-busted.background_Q_component_3[43][27]:=0.1712746635706107*t*busted.background.theta_CG*busted.background.omega3;
-busted.background_Q_component_3[43][35]:=0.4256503784977386*t*busted.background.theta_AG*busted.background.omega3;
-busted.background_Q_component_3[43][39]:=0.1818409092376876*t*busted.background.theta_CG*busted.background.omega3;
-busted.background_Q_component_3[43][40]:=0.5074830879161225*t*busted.background.theta_AT;
-busted.background_Q_component_3[43][41]:=0.09717451507454297*t*busted.background.theta_CT;
-busted.background_Q_component_3[43][42]:=0.1963563685387479*t*busted.background.theta_GT;
-busted.background_Q_component_3[43][47]:=0.2361684149931496*t*busted.background.theta_GT*busted.background.omega3;
-busted.background_Q_component_3[43][56]:=0.257146542110382*t*busted.background.theta_GT*busted.background.omega3;
-busted.background_Q_component_3[44][12]:=0.3148753970510747*t*busted.background.theta_AG*busted.background.omega3;
-busted.background_Q_component_3[44][28]:=0.1712746635706107*t*busted.background.theta_CG*busted.background.omega3;
-busted.background_Q_component_3[44][32]:=0.4256503784977386*t*busted.background.theta_AT*busted.background.omega3;
-busted.background_Q_component_3[44][36]:=0.1818409092376876*t*busted.background.theta_CT*busted.background.omega3;
-busted.background_Q_component_3[44][40]:=0.1563402972714242*t*busted.background.theta_GT*busted.background.omega3;
-busted.background_Q_component_3[44][45]:=0.09717451507454297*t*busted.background.theta_AC;
-busted.background_Q_component_3[44][46]:=0.1963563685387479*t*busted.background.theta_AG;
-busted.background_Q_component_3[44][47]:=0.1989860284705866*t*busted.background.theta_AT;
-busted.background_Q_component_3[44][57]:=0.257146542110382*t*busted.background.theta_GT*busted.background.omega3;
-busted.background_Q_component_3[45][13]:=0.3148753970510747*t*busted.background.theta_AG*busted.background.omega3;
-busted.background_Q_component_3[45][29]:=0.1712746635706107*t*busted.background.theta_CG*busted.background.omega3;
-busted.background_Q_component_3[45][33]:=0.4256503784977386*t*busted.background.theta_AT*busted.background.omega3;
-busted.background_Q_component_3[45][37]:=0.1818409092376876*t*busted.background.theta_CT*busted.background.omega3;
-busted.background_Q_component_3[45][41]:=0.1563402972714242*t*busted.background.theta_GT*busted.background.omega3;
-busted.background_Q_component_3[45][44]:=0.5074830879161225*t*busted.background.theta_AC;
-busted.background_Q_component_3[45][46]:=0.1963563685387479*t*busted.background.theta_CG;
-busted.background_Q_component_3[45][47]:=0.1989860284705866*t*busted.background.theta_CT;
-busted.background_Q_component_3[45][58]:=0.257146542110382*t*busted.background.theta_GT*busted.background.omega3;
-busted.background_Q_component_3[46][14]:=0.3148753970510747*t*busted.background.theta_AG*busted.background.omega3;
-busted.background_Q_component_3[46][30]:=0.1712746635706107*t*busted.background.theta_CG*busted.background.omega3;
-busted.background_Q_component_3[46][34]:=0.4256503784977386*t*busted.background.theta_AT*busted.background.omega3;
-busted.background_Q_component_3[46][38]:=0.1818409092376876*t*busted.background.theta_CT*busted.background.omega3;
-busted.background_Q_component_3[46][42]:=0.1563402972714242*t*busted.background.theta_GT*busted.background.omega3;
-busted.background_Q_component_3[46][44]:=0.5074830879161225*t*busted.background.theta_AG;
-busted.background_Q_component_3[46][45]:=0.09717451507454297*t*busted.background.theta_CG;
-busted.background_Q_component_3[46][47]:=0.1989860284705866*t*busted.background.theta_GT;
-busted.background_Q_component_3[46][59]:=0.257146542110382*t*busted.background.theta_GT*busted.background.omega3;
-busted.background_Q_component_3[47][15]:=0.3148753970510747*t*busted.background.theta_AG*busted.background.omega3;
-busted.background_Q_component_3[47][31]:=0.1712746635706107*t*busted.background.theta_CG*busted.background.omega3;
-busted.background_Q_component_3[47][35]:=0.4256503784977386*t*busted.background.theta_AT*busted.background.omega3;
-busted.background_Q_component_3[47][39]:=0.1818409092376876*t*busted.background.theta_CT*busted.background.omega3;
-busted.background_Q_component_3[47][43]:=0.1563402972714242*t*busted.background.theta_GT*busted.background.omega3;
-busted.background_Q_component_3[47][44]:=0.5074830879161225*t*busted.background.theta_AT;
-busted.background_Q_component_3[47][45]:=0.09717451507454297*t*busted.background.theta_CT;
-busted.background_Q_component_3[47][46]:=0.1963563685387479*t*busted.background.theta_GT;
-busted.background_Q_component_3[47][60]:=0.257146542110382*t*busted.background.theta_GT*busted.background.omega3;
-busted.background_Q_component_3[48][1]:=0.3148753970510747*t*busted.background.theta_AT*busted.background.omega3;
-busted.background_Q_component_3[48][17]:=0.1712746635706107*t*busted.background.theta_CT*busted.background.omega3;
-busted.background_Q_component_3[48][33]:=0.2567033972679326*t*busted.background.theta_GT*busted.background.omega3;
-busted.background_Q_component_3[48][49]:=0.1989860284705866*t*busted.background.theta_CT;
-busted.background_Q_component_3[48][51]:=0.1818409092376876*t*busted.background.theta_AC*busted.background.omega3;
-busted.background_Q_component_3[48][54]:=0.1563402972714242*t*busted.background.theta_AG*busted.background.omega3;
-busted.background_Q_component_3[48][58]:=0.2361684149931496*t*busted.background.theta_AT*busted.background.omega3;
-busted.background_Q_component_3[49][3]:=0.3148753970510747*t*busted.background.theta_AT*busted.background.omega3;
-busted.background_Q_component_3[49][19]:=0.1712746635706107*t*busted.background.theta_CT*busted.background.omega3;
-busted.background_Q_component_3[49][35]:=0.2567033972679326*t*busted.background.theta_GT*busted.background.omega3;
-busted.background_Q_component_3[49][48]:=0.09717451507454297*t*busted.background.theta_CT;
-busted.background_Q_component_3[49][53]:=0.1818409092376876*t*busted.background.theta_AC*busted.background.omega3;
-busted.background_Q_component_3[49][56]:=0.1563402972714242*t*busted.background.theta_AG*busted.background.omega3;
-busted.background_Q_component_3[49][60]:=0.2361684149931496*t*busted.background.theta_AT*busted.background.omega3;
-busted.background_Q_component_3[50][4]:=0.3148753970510747*t*busted.background.theta_AT*busted.background.omega3;
-busted.background_Q_component_3[50][20]:=0.1712746635706107*t*busted.background.theta_CT*busted.background.omega3;
-busted.background_Q_component_3[50][36]:=0.2567033972679326*t*busted.background.theta_GT*busted.background.omega3;
-busted.background_Q_component_3[50][51]:=0.09717451507454297*t*busted.background.theta_AC;
-busted.background_Q_component_3[50][52]:=0.1963563685387479*t*busted.background.theta_AG;
-busted.background_Q_component_3[50][53]:=0.1989860284705866*t*busted.background.theta_AT;
-busted.background_Q_component_3[50][57]:=0.2361684149931496*t*busted.background.theta_CT*busted.background.omega3;
-busted.background_Q_component_3[51][5]:=0.3148753970510747*t*busted.background.theta_AT*busted.background.omega3;
-busted.background_Q_component_3[51][21]:=0.1712746635706107*t*busted.background.theta_CT*busted.background.omega3;
-busted.background_Q_component_3[51][37]:=0.2567033972679326*t*busted.background.theta_GT*busted.background.omega3;
-busted.background_Q_component_3[51][48]:=0.4256503784977386*t*busted.background.theta_AC*busted.background.omega3;
-busted.background_Q_component_3[51][50]:=0.5074830879161225*t*busted.background.theta_AC;
-busted.background_Q_component_3[51][52]:=0.1963563685387479*t*busted.background.theta_CG;
-busted.background_Q_component_3[51][53]:=0.1989860284705866*t*busted.background.theta_CT;
-busted.background_Q_component_3[51][54]:=0.1563402972714242*t*busted.background.theta_CG*busted.background.omega3;
-busted.background_Q_component_3[51][58]:=0.2361684149931496*t*busted.background.theta_CT*busted.background.omega3;
-busted.background_Q_component_3[52][6]:=0.3148753970510747*t*busted.background.theta_AT*busted.background.omega3;
-busted.background_Q_component_3[52][22]:=0.1712746635706107*t*busted.background.theta_CT*busted.background.omega3;
-busted.background_Q_component_3[52][38]:=0.2567033972679326*t*busted.background.theta_GT*busted.background.omega3;
-busted.background_Q_component_3[52][50]:=0.5074830879161225*t*busted.background.theta_AG;
-busted.background_Q_component_3[52][51]:=0.09717451507454297*t*busted.background.theta_CG;
-busted.background_Q_component_3[52][53]:=0.1989860284705866*t*busted.background.theta_GT;
-busted.background_Q_component_3[52][55]:=0.1563402972714242*t*busted.background.theta_CG*busted.background.omega3;
-busted.background_Q_component_3[52][59]:=0.2361684149931496*t*busted.background.theta_CT*busted.background.omega3;
-busted.background_Q_component_3[53][7]:=0.3148753970510747*t*busted.background.theta_AT*busted.background.omega3;
-busted.background_Q_component_3[53][23]:=0.1712746635706107*t*busted.background.theta_CT*busted.background.omega3;
-busted.background_Q_component_3[53][39]:=0.2567033972679326*t*busted.background.theta_GT*busted.background.omega3;
-busted.background_Q_component_3[53][49]:=0.4256503784977386*t*busted.background.theta_AC*busted.background.omega3;
-busted.background_Q_component_3[53][50]:=0.5074830879161225*t*busted.background.theta_AT;
-busted.background_Q_component_3[53][51]:=0.09717451507454297*t*busted.background.theta_CT;
-busted.background_Q_component_3[53][52]:=0.1963563685387479*t*busted.background.theta_GT;
-busted.background_Q_component_3[53][56]:=0.1563402972714242*t*busted.background.theta_CG*busted.background.omega3;
-busted.background_Q_component_3[53][60]:=0.2361684149931496*t*busted.background.theta_CT*busted.background.omega3;
-busted.background_Q_component_3[54][9]:=0.3148753970510747*t*busted.background.theta_AT*busted.background.omega3;
-busted.background_Q_component_3[54][25]:=0.1712746635706107*t*busted.background.theta_CT*busted.background.omega3;
-busted.background_Q_component_3[54][41]:=0.2567033972679326*t*busted.background.theta_GT*busted.background.omega3;
-busted.background_Q_component_3[54][48]:=0.4256503784977386*t*busted.background.theta_AG*busted.background.omega3;
-busted.background_Q_component_3[54][51]:=0.1818409092376876*t*busted.background.theta_CG*busted.background.omega3;
-busted.background_Q_component_3[54][55]:=0.1963563685387479*t*busted.background.theta_CG*busted.background.omega3;
-busted.background_Q_component_3[54][56]:=0.1989860284705866*t*busted.background.theta_CT;
-busted.background_Q_component_3[54][58]:=0.2361684149931496*t*busted.background.theta_GT*busted.background.omega3;
-busted.background_Q_component_3[55][10]:=0.3148753970510747*t*busted.background.theta_AT*busted.background.omega3;
-busted.background_Q_component_3[55][26]:=0.1712746635706107*t*busted.background.theta_CT*busted.background.omega3;
-busted.background_Q_component_3[55][42]:=0.2567033972679326*t*busted.background.theta_GT*busted.background.omega3;
-busted.background_Q_component_3[55][52]:=0.1818409092376876*t*busted.background.theta_CG*busted.background.omega3;
-busted.background_Q_component_3[55][54]:=0.09717451507454297*t*busted.background.theta_CG*busted.background.omega3;
-busted.background_Q_component_3[55][56]:=0.1989860284705866*t*busted.background.theta_GT*busted.background.omega3;
-busted.background_Q_component_3[55][59]:=0.2361684149931496*t*busted.background.theta_GT*busted.background.omega3;
-busted.background_Q_component_3[56][11]:=0.3148753970510747*t*busted.background.theta_AT*busted.background.omega3;
-busted.background_Q_component_3[56][27]:=0.1712746635706107*t*busted.background.theta_CT*busted.background.omega3;
-busted.background_Q_component_3[56][43]:=0.2567033972679326*t*busted.background.theta_GT*busted.background.omega3;
-busted.background_Q_component_3[56][49]:=0.4256503784977386*t*busted.background.theta_AG*busted.background.omega3;
-busted.background_Q_component_3[56][53]:=0.1818409092376876*t*busted.background.theta_CG*busted.background.omega3;
-busted.background_Q_component_3[56][54]:=0.09717451507454297*t*busted.background.theta_CT;
-busted.background_Q_component_3[56][55]:=0.1963563685387479*t*busted.background.theta_GT*busted.background.omega3;
-busted.background_Q_component_3[56][60]:=0.2361684149931496*t*busted.background.theta_GT*busted.background.omega3;
-busted.background_Q_component_3[57][12]:=0.3148753970510747*t*busted.background.theta_AT*busted.background.omega3;
-busted.background_Q_component_3[57][28]:=0.1712746635706107*t*busted.background.theta_CT;
-busted.background_Q_component_3[57][44]:=0.2567033972679326*t*busted.background.theta_GT*busted.background.omega3;
-busted.background_Q_component_3[57][50]:=0.1818409092376876*t*busted.background.theta_CT*busted.background.omega3;
-busted.background_Q_component_3[57][58]:=0.09717451507454297*t*busted.background.theta_AC*busted.background.omega3;
-busted.background_Q_component_3[57][59]:=0.1963563685387479*t*busted.background.theta_AG;
-busted.background_Q_component_3[57][60]:=0.1989860284705866*t*busted.background.theta_AT*busted.background.omega3;
-busted.background_Q_component_3[58][13]:=0.3148753970510747*t*busted.background.theta_AT*busted.background.omega3;
-busted.background_Q_component_3[58][29]:=0.1712746635706107*t*busted.background.theta_CT*busted.background.omega3;
-busted.background_Q_component_3[58][45]:=0.2567033972679326*t*busted.background.theta_GT*busted.background.omega3;
-busted.background_Q_component_3[58][48]:=0.4256503784977386*t*busted.background.theta_AT*busted.background.omega3;
-busted.background_Q_component_3[58][51]:=0.1818409092376876*t*busted.background.theta_CT*busted.background.omega3;
-busted.background_Q_component_3[58][54]:=0.1563402972714242*t*busted.background.theta_GT*busted.background.omega3;
-busted.background_Q_component_3[58][57]:=0.5074830879161225*t*busted.background.theta_AC*busted.background.omega3;
-busted.background_Q_component_3[58][59]:=0.1963563685387479*t*busted.background.theta_CG*busted.background.omega3;
-busted.background_Q_component_3[58][60]:=0.1989860284705866*t*busted.background.theta_CT;
-busted.background_Q_component_3[59][14]:=0.3148753970510747*t*busted.background.theta_AT*busted.background.omega3;
-busted.background_Q_component_3[59][30]:=0.1712746635706107*t*busted.background.theta_CT;
-busted.background_Q_component_3[59][46]:=0.2567033972679326*t*busted.background.theta_GT*busted.background.omega3;
-busted.background_Q_component_3[59][52]:=0.1818409092376876*t*busted.background.theta_CT*busted.background.omega3;
-busted.background_Q_component_3[59][55]:=0.1563402972714242*t*busted.background.theta_GT*busted.background.omega3;
-busted.background_Q_component_3[59][57]:=0.5074830879161225*t*busted.background.theta_AG;
-busted.background_Q_component_3[59][58]:=0.09717451507454297*t*busted.background.theta_CG*busted.background.omega3;
-busted.background_Q_component_3[59][60]:=0.1989860284705866*t*busted.background.theta_GT*busted.background.omega3;
-busted.background_Q_component_3[60][15]:=0.3148753970510747*t*busted.background.theta_AT*busted.background.omega3;
-busted.background_Q_component_3[60][31]:=0.1712746635706107*t*busted.background.theta_CT*busted.background.omega3;
-busted.background_Q_component_3[60][47]:=0.2567033972679326*t*busted.background.theta_GT*busted.background.omega3;
-busted.background_Q_component_3[60][49]:=0.4256503784977386*t*busted.background.theta_AT*busted.background.omega3;
-busted.background_Q_component_3[60][53]:=0.1818409092376876*t*busted.background.theta_CT*busted.background.omega3;
-busted.background_Q_component_3[60][56]:=0.1563402972714242*t*busted.background.theta_GT*busted.background.omega3;
-busted.background_Q_component_3[60][57]:=0.5074830879161225*t*busted.background.theta_AT*busted.background.omega3;
-busted.background_Q_component_3[60][58]:=0.09717451507454297*t*busted.background.theta_CT;
-busted.background_Q_component_3[60][59]:=0.1963563685387479*t*busted.background.theta_GT*busted.background.omega3;
-
-
-busted.background_pi={
-{0.07535940345366139} 
-{0.01443006409728228} 
-{0.02915821068672351} 
-{0.02954870567752823} 
-{0.03219408024958758} 
-{0.006164627375802654} 
-{0.01245659774045292} 
-{0.01262342001471309} 
-{0.0276793164843978} 
-{0.005300125700761717} 
-{0.01070973633984303} 
-{0.01085316415297191} 
-{0.0418125103783387} 
-{0.008006395714089126} 
-{0.01617817990958604} 
-{0.0163948426631036} 
-{0.0409913146415633} 
-{0.007849150478922548} 
-{0.01586044121725868} 
-{0.01607284872448998} 
-{0.01751178502783737} 
-{0.003353213651232053} 
-{0.006775694789785172} 
-{0.006866436807635995} 
-{0.01505600521072376} 
-{0.002882972930821469} 
-{0.005825499564956559} 
-{0.005903516300053625} 
-{0.02274367484777162} 
-{0.004355032959661065} 
-{0.008800028033786655} 
-{0.008917880494044083} 
-{0.06143704799998004} 
-{0.01176416611541591} 
-{0.0237713451467977} 
-{0.0240896977132239} 
-{0.0262463496652457} 
-{0.005025736545566795} 
-{0.01015528996016046} 
-{0.01029129247081581} 
-{0.02256567087217255} 
-{0.004320948178469224} 
-{0.008731154380523415} 
-{0.00884808446536876} 
-{0.034087812394816} 
-{0.006527245376826684} 
-{0.01318932435908579} 
-{0.01336595951511979} 
-{0.01178447449308153} 
-{0.02413128354890585} 
-{0.0262916585104385} 
-{0.005034412430862358} 
-{0.01017282094890981} 
-{0.01030905823951665} 
-{0.004328407393735399} 
-{0.008746226896405704} 
-{0.008863358836639712} 
-{0.03414665788893068} 
-{0.006538513303760755} 
-{0.0132120929750345} 
-{0.01338903305480236} 
-};
-Model busted.background=('Exp(busted.background_Q_component_1)*1*busted.background.bsrel_mixture_aux_0+Exp(busted.background_Q_component_2)*1*(1-busted.background.bsrel_mixture_aux_0)*busted.background.bsrel_mixture_aux_1+Exp(busted.background_Q_component_3)*1*(1-busted.background.bsrel_mixture_aux_0)*(1-busted.background.bsrel_mixture_aux_1)',busted.background_pi,EXPLICIT_FORM_MATRIX_EXPONENTIAL);
-
-busted.test_Q_component_1={61,61};
-busted.test_Q_component_1[0][1]:=0.09717451507454297*t*busted.test.theta_AC*busted.test.omega1;
-busted.test_Q_component_1[0][2]:=0.1963563685387479*t*busted.test.theta_AG;
-busted.test_Q_component_1[0][3]:=0.1989860284705866*t*busted.test.omega1*busted.test.theta_AT;
-busted.test_Q_component_1[0][4]:=0.1818409092376876*t*busted.test.theta_AC*busted.test.omega1;
-busted.test_Q_component_1[0][8]:=0.1563402972714242*t*busted.test.theta_AG*busted.test.omega1;
-busted.test_Q_component_1[0][12]:=0.2361684149931496*t*busted.test.omega1*busted.test.theta_AT;
-busted.test_Q_component_1[0][16]:=0.1712746635706107*t*busted.test.theta_AC*busted.test.omega1;
-busted.test_Q_component_1[0][32]:=0.2567033972679326*t*busted.test.theta_AG*busted.test.omega1;
-busted.test_Q_component_1[1][0]:=0.5074830879161225*t*busted.test.theta_AC*busted.test.omega1;
-busted.test_Q_component_1[1][2]:=0.1963563685387479*t*busted.test.omega1*busted.test.theta_CG;
-busted.test_Q_component_1[1][3]:=0.1989860284705866*t*busted.test.theta_CT;
-busted.test_Q_component_1[1][5]:=0.1818409092376876*t*busted.test.theta_AC*busted.test.omega1;
-busted.test_Q_component_1[1][9]:=0.1563402972714242*t*busted.test.theta_AG*busted.test.omega1;
-busted.test_Q_component_1[1][13]:=0.2361684149931496*t*busted.test.omega1*busted.test.theta_AT;
-busted.test_Q_component_1[1][17]:=0.1712746635706107*t*busted.test.theta_AC*busted.test.omega1;
-busted.test_Q_component_1[1][33]:=0.2567033972679326*t*busted.test.theta_AG*busted.test.omega1;
-busted.test_Q_component_1[1][48]:=0.257146542110382*t*busted.test.omega1*busted.test.theta_AT;
-busted.test_Q_component_1[2][0]:=0.5074830879161225*t*busted.test.theta_AG;
-busted.test_Q_component_1[2][1]:=0.09717451507454297*t*busted.test.omega1*busted.test.theta_CG;
-busted.test_Q_component_1[2][3]:=0.1989860284705866*t*busted.test.omega1*busted.test.theta_GT;
-busted.test_Q_component_1[2][6]:=0.1818409092376876*t*busted.test.theta_AC*busted.test.omega1;
-busted.test_Q_component_1[2][10]:=0.1563402972714242*t*busted.test.theta_AG*busted.test.omega1;
-busted.test_Q_component_1[2][14]:=0.2361684149931496*t*busted.test.omega1*busted.test.theta_AT;
-busted.test_Q_component_1[2][18]:=0.1712746635706107*t*busted.test.theta_AC*busted.test.omega1;
-busted.test_Q_component_1[2][34]:=0.2567033972679326*t*busted.test.theta_AG*busted.test.omega1;
-busted.test_Q_component_1[3][0]:=0.5074830879161225*t*busted.test.omega1*busted.test.theta_AT;
-busted.test_Q_component_1[3][1]:=0.09717451507454297*t*busted.test.theta_CT;
-busted.test_Q_component_1[3][2]:=0.1963563685387479*t*busted.test.omega1*busted.test.theta_GT;
-busted.test_Q_component_1[3][7]:=0.1818409092376876*t*busted.test.theta_AC*busted.test.omega1;
-busted.test_Q_component_1[3][11]:=0.1563402972714242*t*busted.test.theta_AG*busted.test.omega1;
-busted.test_Q_component_1[3][15]:=0.2361684149931496*t*busted.test.omega1*busted.test.theta_AT;
-busted.test_Q_component_1[3][19]:=0.1712746635706107*t*busted.test.theta_AC*busted.test.omega1;
-busted.test_Q_component_1[3][35]:=0.2567033972679326*t*busted.test.theta_AG*busted.test.omega1;
-busted.test_Q_component_1[3][49]:=0.257146542110382*t*busted.test.omega1*busted.test.theta_AT;
-busted.test_Q_component_1[4][0]:=0.4256503784977386*t*busted.test.theta_AC*busted.test.omega1;
-busted.test_Q_component_1[4][5]:=0.09717451507454297*t*busted.test.theta_AC;
-busted.test_Q_component_1[4][6]:=0.1963563685387479*t*busted.test.theta_AG;
-busted.test_Q_component_1[4][7]:=0.1989860284705866*t*busted.test.theta_AT;
-busted.test_Q_component_1[4][8]:=0.1563402972714242*t*busted.test.omega1*busted.test.theta_CG;
-busted.test_Q_component_1[4][12]:=0.2361684149931496*t*busted.test.omega1*busted.test.theta_CT;
-busted.test_Q_component_1[4][20]:=0.1712746635706107*t*busted.test.theta_AC*busted.test.omega1;
-busted.test_Q_component_1[4][36]:=0.2567033972679326*t*busted.test.theta_AG*busted.test.omega1;
-busted.test_Q_component_1[4][50]:=0.257146542110382*t*busted.test.omega1*busted.test.theta_AT;
-busted.test_Q_component_1[5][1]:=0.4256503784977386*t*busted.test.theta_AC*busted.test.omega1;
-busted.test_Q_component_1[5][4]:=0.5074830879161225*t*busted.test.theta_AC;
-busted.test_Q_component_1[5][6]:=0.1963563685387479*t*busted.test.theta_CG;
-busted.test_Q_component_1[5][7]:=0.1989860284705866*t*busted.test.theta_CT;
-busted.test_Q_component_1[5][9]:=0.1563402972714242*t*busted.test.omega1*busted.test.theta_CG;
-busted.test_Q_component_1[5][13]:=0.2361684149931496*t*busted.test.omega1*busted.test.theta_CT;
-busted.test_Q_component_1[5][21]:=0.1712746635706107*t*busted.test.theta_AC*busted.test.omega1;
-busted.test_Q_component_1[5][37]:=0.2567033972679326*t*busted.test.theta_AG*busted.test.omega1;
-busted.test_Q_component_1[5][51]:=0.257146542110382*t*busted.test.omega1*busted.test.theta_AT;
-busted.test_Q_component_1[6][2]:=0.4256503784977386*t*busted.test.theta_AC*busted.test.omega1;
-busted.test_Q_component_1[6][4]:=0.5074830879161225*t*busted.test.theta_AG;
-busted.test_Q_component_1[6][5]:=0.09717451507454297*t*busted.test.theta_CG;
-busted.test_Q_component_1[6][7]:=0.1989860284705866*t*busted.test.theta_GT;
-busted.test_Q_component_1[6][10]:=0.1563402972714242*t*busted.test.omega1*busted.test.theta_CG;
-busted.test_Q_component_1[6][14]:=0.2361684149931496*t*busted.test.omega1*busted.test.theta_CT;
-busted.test_Q_component_1[6][22]:=0.1712746635706107*t*busted.test.theta_AC*busted.test.omega1;
-busted.test_Q_component_1[6][38]:=0.2567033972679326*t*busted.test.theta_AG*busted.test.omega1;
-busted.test_Q_component_1[6][52]:=0.257146542110382*t*busted.test.omega1*busted.test.theta_AT;
-busted.test_Q_component_1[7][3]:=0.4256503784977386*t*busted.test.theta_AC*busted.test.omega1;
-busted.test_Q_component_1[7][4]:=0.5074830879161225*t*busted.test.theta_AT;
-busted.test_Q_component_1[7][5]:=0.09717451507454297*t*busted.test.theta_CT;
-busted.test_Q_component_1[7][6]:=0.1963563685387479*t*busted.test.theta_GT;
-busted.test_Q_component_1[7][11]:=0.1563402972714242*t*busted.test.omega1*busted.test.theta_CG;
-busted.test_Q_component_1[7][15]:=0.2361684149931496*t*busted.test.omega1*busted.test.theta_CT;
-busted.test_Q_component_1[7][23]:=0.1712746635706107*t*busted.test.theta_AC*busted.test.omega1;
-busted.test_Q_component_1[7][39]:=0.2567033972679326*t*busted.test.theta_AG*busted.test.omega1;
-busted.test_Q_component_1[7][53]:=0.257146542110382*t*busted.test.omega1*busted.test.theta_AT;
-busted.test_Q_component_1[8][0]:=0.4256503784977386*t*busted.test.theta_AG*busted.test.omega1;
-busted.test_Q_component_1[8][4]:=0.1818409092376876*t*busted.test.omega1*busted.test.theta_CG;
-busted.test_Q_component_1[8][9]:=0.09717451507454297*t*busted.test.theta_AC*busted.test.omega1;
-busted.test_Q_component_1[8][10]:=0.1963563685387479*t*busted.test.theta_AG;
-busted.test_Q_component_1[8][11]:=0.1989860284705866*t*busted.test.omega1*busted.test.theta_AT;
-busted.test_Q_component_1[8][12]:=0.2361684149931496*t*busted.test.omega1*busted.test.theta_GT;
-busted.test_Q_component_1[8][24]:=0.1712746635706107*t*busted.test.theta_AC;
-busted.test_Q_component_1[8][40]:=0.2567033972679326*t*busted.test.theta_AG*busted.test.omega1;
-busted.test_Q_component_1[9][1]:=0.4256503784977386*t*busted.test.theta_AG*busted.test.omega1;
-busted.test_Q_component_1[9][5]:=0.1818409092376876*t*busted.test.omega1*busted.test.theta_CG;
-busted.test_Q_component_1[9][8]:=0.5074830879161225*t*busted.test.theta_AC*busted.test.omega1;
-busted.test_Q_component_1[9][10]:=0.1963563685387479*t*busted.test.omega1*busted.test.theta_CG;
-busted.test_Q_component_1[9][11]:=0.1989860284705866*t*busted.test.theta_CT;
-busted.test_Q_component_1[9][13]:=0.2361684149931496*t*busted.test.omega1*busted.test.theta_GT;
-busted.test_Q_component_1[9][25]:=0.1712746635706107*t*busted.test.theta_AC*busted.test.omega1;
-busted.test_Q_component_1[9][41]:=0.2567033972679326*t*busted.test.theta_AG*busted.test.omega1;
-busted.test_Q_component_1[9][54]:=0.257146542110382*t*busted.test.omega1*busted.test.theta_AT;
-busted.test_Q_component_1[10][2]:=0.4256503784977386*t*busted.test.theta_AG*busted.test.omega1;
-busted.test_Q_component_1[10][6]:=0.1818409092376876*t*busted.test.omega1*busted.test.theta_CG;
-busted.test_Q_component_1[10][8]:=0.5074830879161225*t*busted.test.theta_AG;
-busted.test_Q_component_1[10][9]:=0.09717451507454297*t*busted.test.omega1*busted.test.theta_CG;
-busted.test_Q_component_1[10][11]:=0.1989860284705866*t*busted.test.omega1*busted.test.theta_GT;
-busted.test_Q_component_1[10][14]:=0.2361684149931496*t*busted.test.omega1*busted.test.theta_GT;
-busted.test_Q_component_1[10][26]:=0.1712746635706107*t*busted.test.theta_AC;
-busted.test_Q_component_1[10][42]:=0.2567033972679326*t*busted.test.theta_AG*busted.test.omega1;
-busted.test_Q_component_1[10][55]:=0.257146542110382*t*busted.test.omega1*busted.test.theta_AT;
-busted.test_Q_component_1[11][3]:=0.4256503784977386*t*busted.test.theta_AG*busted.test.omega1;
-busted.test_Q_component_1[11][7]:=0.1818409092376876*t*busted.test.omega1*busted.test.theta_CG;
-busted.test_Q_component_1[11][8]:=0.5074830879161225*t*busted.test.omega1*busted.test.theta_AT;
-busted.test_Q_component_1[11][9]:=0.09717451507454297*t*busted.test.theta_CT;
-busted.test_Q_component_1[11][10]:=0.1963563685387479*t*busted.test.omega1*busted.test.theta_GT;
-busted.test_Q_component_1[11][15]:=0.2361684149931496*t*busted.test.omega1*busted.test.theta_GT;
-busted.test_Q_component_1[11][27]:=0.1712746635706107*t*busted.test.theta_AC*busted.test.omega1;
-busted.test_Q_component_1[11][43]:=0.2567033972679326*t*busted.test.theta_AG*busted.test.omega1;
-busted.test_Q_component_1[11][56]:=0.257146542110382*t*busted.test.omega1*busted.test.theta_AT;
-busted.test_Q_component_1[12][0]:=0.4256503784977386*t*busted.test.omega1*busted.test.theta_AT;
-busted.test_Q_component_1[12][4]:=0.1818409092376876*t*busted.test.omega1*busted.test.theta_CT;
-busted.test_Q_component_1[12][8]:=0.1563402972714242*t*busted.test.omega1*busted.test.theta_GT;
-busted.test_Q_component_1[12][13]:=0.09717451507454297*t*busted.test.theta_AC;
-busted.test_Q_component_1[12][14]:=0.1963563685387479*t*busted.test.theta_AG*busted.test.omega1;
-busted.test_Q_component_1[12][15]:=0.1989860284705866*t*busted.test.theta_AT;
-busted.test_Q_component_1[12][28]:=0.1712746635706107*t*busted.test.theta_AC*busted.test.omega1;
-busted.test_Q_component_1[12][44]:=0.2567033972679326*t*busted.test.theta_AG*busted.test.omega1;
-busted.test_Q_component_1[12][57]:=0.257146542110382*t*busted.test.omega1*busted.test.theta_AT;
-busted.test_Q_component_1[13][1]:=0.4256503784977386*t*busted.test.omega1*busted.test.theta_AT;
-busted.test_Q_component_1[13][5]:=0.1818409092376876*t*busted.test.omega1*busted.test.theta_CT;
-busted.test_Q_component_1[13][9]:=0.1563402972714242*t*busted.test.omega1*busted.test.theta_GT;
-busted.test_Q_component_1[13][12]:=0.5074830879161225*t*busted.test.theta_AC;
-busted.test_Q_component_1[13][14]:=0.1963563685387479*t*busted.test.omega1*busted.test.theta_CG;
-busted.test_Q_component_1[13][15]:=0.1989860284705866*t*busted.test.theta_CT;
-busted.test_Q_component_1[13][29]:=0.1712746635706107*t*busted.test.theta_AC*busted.test.omega1;
-busted.test_Q_component_1[13][45]:=0.2567033972679326*t*busted.test.theta_AG*busted.test.omega1;
-busted.test_Q_component_1[13][58]:=0.257146542110382*t*busted.test.omega1*busted.test.theta_AT;
-busted.test_Q_component_1[14][2]:=0.4256503784977386*t*busted.test.omega1*busted.test.theta_AT;
-busted.test_Q_component_1[14][6]:=0.1818409092376876*t*busted.test.omega1*busted.test.theta_CT;
-busted.test_Q_component_1[14][10]:=0.1563402972714242*t*busted.test.omega1*busted.test.theta_GT;
-busted.test_Q_component_1[14][12]:=0.5074830879161225*t*busted.test.theta_AG*busted.test.omega1;
-busted.test_Q_component_1[14][13]:=0.09717451507454297*t*busted.test.omega1*busted.test.theta_CG;
-busted.test_Q_component_1[14][15]:=0.1989860284705866*t*busted.test.omega1*busted.test.theta_GT;
-busted.test_Q_component_1[14][30]:=0.1712746635706107*t*busted.test.theta_AC*busted.test.omega1;
-busted.test_Q_component_1[14][46]:=0.2567033972679326*t*busted.test.theta_AG*busted.test.omega1;
-busted.test_Q_component_1[14][59]:=0.257146542110382*t*busted.test.omega1*busted.test.theta_AT;
-busted.test_Q_component_1[15][3]:=0.4256503784977386*t*busted.test.omega1*busted.test.theta_AT;
-busted.test_Q_component_1[15][7]:=0.1818409092376876*t*busted.test.omega1*busted.test.theta_CT;
-busted.test_Q_component_1[15][11]:=0.1563402972714242*t*busted.test.omega1*busted.test.theta_GT;
-busted.test_Q_component_1[15][12]:=0.5074830879161225*t*busted.test.theta_AT;
-busted.test_Q_component_1[15][13]:=0.09717451507454297*t*busted.test.theta_CT;
-busted.test_Q_component_1[15][14]:=0.1963563685387479*t*busted.test.omega1*busted.test.theta_GT;
-busted.test_Q_component_1[15][31]:=0.1712746635706107*t*busted.test.theta_AC*busted.test.omega1;
-busted.test_Q_component_1[15][47]:=0.2567033972679326*t*busted.test.theta_AG*busted.test.omega1;
-busted.test_Q_component_1[15][60]:=0.257146542110382*t*busted.test.omega1*busted.test.theta_AT;
-busted.test_Q_component_1[16][0]:=0.3148753970510747*t*busted.test.theta_AC*busted.test.omega1;
-busted.test_Q_component_1[16][17]:=0.09717451507454297*t*busted.test.theta_AC*busted.test.omega1;
-busted.test_Q_component_1[16][18]:=0.1963563685387479*t*busted.test.theta_AG;
-busted.test_Q_component_1[16][19]:=0.1989860284705866*t*busted.test.omega1*busted.test.theta_AT;
-busted.test_Q_component_1[16][20]:=0.1818409092376876*t*busted.test.theta_AC*busted.test.omega1;
-busted.test_Q_component_1[16][24]:=0.1563402972714242*t*busted.test.theta_AG*busted.test.omega1;
-busted.test_Q_component_1[16][28]:=0.2361684149931496*t*busted.test.omega1*busted.test.theta_AT;
-busted.test_Q_component_1[16][32]:=0.2567033972679326*t*busted.test.omega1*busted.test.theta_CG;
-busted.test_Q_component_1[17][1]:=0.3148753970510747*t*busted.test.theta_AC*busted.test.omega1;
-busted.test_Q_component_1[17][16]:=0.5074830879161225*t*busted.test.theta_AC*busted.test.omega1;
-busted.test_Q_component_1[17][18]:=0.1963563685387479*t*busted.test.omega1*busted.test.theta_CG;
-busted.test_Q_component_1[17][19]:=0.1989860284705866*t*busted.test.theta_CT;
-busted.test_Q_component_1[17][21]:=0.1818409092376876*t*busted.test.theta_AC*busted.test.omega1;
-busted.test_Q_component_1[17][25]:=0.1563402972714242*t*busted.test.theta_AG*busted.test.omega1;
-busted.test_Q_component_1[17][29]:=0.2361684149931496*t*busted.test.omega1*busted.test.theta_AT;
-busted.test_Q_component_1[17][33]:=0.2567033972679326*t*busted.test.omega1*busted.test.theta_CG;
-busted.test_Q_component_1[17][48]:=0.257146542110382*t*busted.test.omega1*busted.test.theta_CT;
-busted.test_Q_component_1[18][2]:=0.3148753970510747*t*busted.test.theta_AC*busted.test.omega1;
-busted.test_Q_component_1[18][16]:=0.5074830879161225*t*busted.test.theta_AG;
-busted.test_Q_component_1[18][17]:=0.09717451507454297*t*busted.test.omega1*busted.test.theta_CG;
-busted.test_Q_component_1[18][19]:=0.1989860284705866*t*busted.test.omega1*busted.test.theta_GT;
-busted.test_Q_component_1[18][22]:=0.1818409092376876*t*busted.test.theta_AC*busted.test.omega1;
-busted.test_Q_component_1[18][26]:=0.1563402972714242*t*busted.test.theta_AG*busted.test.omega1;
-busted.test_Q_component_1[18][30]:=0.2361684149931496*t*busted.test.omega1*busted.test.theta_AT;
-busted.test_Q_component_1[18][34]:=0.2567033972679326*t*busted.test.omega1*busted.test.theta_CG;
-busted.test_Q_component_1[19][3]:=0.3148753970510747*t*busted.test.theta_AC*busted.test.omega1;
-busted.test_Q_component_1[19][16]:=0.5074830879161225*t*busted.test.omega1*busted.test.theta_AT;
-busted.test_Q_component_1[19][17]:=0.09717451507454297*t*busted.test.theta_CT;
-busted.test_Q_component_1[19][18]:=0.1963563685387479*t*busted.test.omega1*busted.test.theta_GT;
-busted.test_Q_component_1[19][23]:=0.1818409092376876*t*busted.test.theta_AC*busted.test.omega1;
-busted.test_Q_component_1[19][27]:=0.1563402972714242*t*busted.test.theta_AG*busted.test.omega1;
-busted.test_Q_component_1[19][31]:=0.2361684149931496*t*busted.test.omega1*busted.test.theta_AT;
-busted.test_Q_component_1[19][35]:=0.2567033972679326*t*busted.test.omega1*busted.test.theta_CG;
-busted.test_Q_component_1[19][49]:=0.257146542110382*t*busted.test.omega1*busted.test.theta_CT;
-busted.test_Q_component_1[20][4]:=0.3148753970510747*t*busted.test.theta_AC*busted.test.omega1;
-busted.test_Q_component_1[20][16]:=0.4256503784977386*t*busted.test.theta_AC*busted.test.omega1;
-busted.test_Q_component_1[20][21]:=0.09717451507454297*t*busted.test.theta_AC;
-busted.test_Q_component_1[20][22]:=0.1963563685387479*t*busted.test.theta_AG;
-busted.test_Q_component_1[20][23]:=0.1989860284705866*t*busted.test.theta_AT;
-busted.test_Q_component_1[20][24]:=0.1563402972714242*t*busted.test.omega1*busted.test.theta_CG;
-busted.test_Q_component_1[20][28]:=0.2361684149931496*t*busted.test.omega1*busted.test.theta_CT;
-busted.test_Q_component_1[20][36]:=0.2567033972679326*t*busted.test.omega1*busted.test.theta_CG;
-busted.test_Q_component_1[20][50]:=0.257146542110382*t*busted.test.omega1*busted.test.theta_CT;
-busted.test_Q_component_1[21][5]:=0.3148753970510747*t*busted.test.theta_AC*busted.test.omega1;
-busted.test_Q_component_1[21][17]:=0.4256503784977386*t*busted.test.theta_AC*busted.test.omega1;
-busted.test_Q_component_1[21][20]:=0.5074830879161225*t*busted.test.theta_AC;
-busted.test_Q_component_1[21][22]:=0.1963563685387479*t*busted.test.theta_CG;
-busted.test_Q_component_1[21][23]:=0.1989860284705866*t*busted.test.theta_CT;
-busted.test_Q_component_1[21][25]:=0.1563402972714242*t*busted.test.omega1*busted.test.theta_CG;
-busted.test_Q_component_1[21][29]:=0.2361684149931496*t*busted.test.omega1*busted.test.theta_CT;
-busted.test_Q_component_1[21][37]:=0.2567033972679326*t*busted.test.omega1*busted.test.theta_CG;
-busted.test_Q_component_1[21][51]:=0.257146542110382*t*busted.test.omega1*busted.test.theta_CT;
-busted.test_Q_component_1[22][6]:=0.3148753970510747*t*busted.test.theta_AC*busted.test.omega1;
-busted.test_Q_component_1[22][18]:=0.4256503784977386*t*busted.test.theta_AC*busted.test.omega1;
-busted.test_Q_component_1[22][20]:=0.5074830879161225*t*busted.test.theta_AG;
-busted.test_Q_component_1[22][21]:=0.09717451507454297*t*busted.test.theta_CG;
-busted.test_Q_component_1[22][23]:=0.1989860284705866*t*busted.test.theta_GT;
-busted.test_Q_component_1[22][26]:=0.1563402972714242*t*busted.test.omega1*busted.test.theta_CG;
-busted.test_Q_component_1[22][30]:=0.2361684149931496*t*busted.test.omega1*busted.test.theta_CT;
-busted.test_Q_component_1[22][38]:=0.2567033972679326*t*busted.test.omega1*busted.test.theta_CG;
-busted.test_Q_component_1[22][52]:=0.257146542110382*t*busted.test.omega1*busted.test.theta_CT;
-busted.test_Q_component_1[23][7]:=0.3148753970510747*t*busted.test.theta_AC*busted.test.omega1;
-busted.test_Q_component_1[23][19]:=0.4256503784977386*t*busted.test.theta_AC*busted.test.omega1;
-busted.test_Q_component_1[23][20]:=0.5074830879161225*t*busted.test.theta_AT;
-busted.test_Q_component_1[23][21]:=0.09717451507454297*t*busted.test.theta_CT;
-busted.test_Q_component_1[23][22]:=0.1963563685387479*t*busted.test.theta_GT;
-busted.test_Q_component_1[23][27]:=0.1563402972714242*t*busted.test.omega1*busted.test.theta_CG;
-busted.test_Q_component_1[23][31]:=0.2361684149931496*t*busted.test.omega1*busted.test.theta_CT;
-busted.test_Q_component_1[23][39]:=0.2567033972679326*t*busted.test.omega1*busted.test.theta_CG;
-busted.test_Q_component_1[23][53]:=0.257146542110382*t*busted.test.omega1*busted.test.theta_CT;
-busted.test_Q_component_1[24][8]:=0.3148753970510747*t*busted.test.theta_AC;
-busted.test_Q_component_1[24][16]:=0.4256503784977386*t*busted.test.theta_AG*busted.test.omega1;
-busted.test_Q_component_1[24][20]:=0.1818409092376876*t*busted.test.omega1*busted.test.theta_CG;
-busted.test_Q_component_1[24][25]:=0.09717451507454297*t*busted.test.theta_AC;
-busted.test_Q_component_1[24][26]:=0.1963563685387479*t*busted.test.theta_AG;
-busted.test_Q_component_1[24][27]:=0.1989860284705866*t*busted.test.theta_AT;
-busted.test_Q_component_1[24][28]:=0.2361684149931496*t*busted.test.omega1*busted.test.theta_GT;
-busted.test_Q_component_1[24][40]:=0.2567033972679326*t*busted.test.omega1*busted.test.theta_CG;
-busted.test_Q_component_1[25][9]:=0.3148753970510747*t*busted.test.theta_AC*busted.test.omega1;
-busted.test_Q_component_1[25][17]:=0.4256503784977386*t*busted.test.theta_AG*busted.test.omega1;
-busted.test_Q_component_1[25][21]:=0.1818409092376876*t*busted.test.omega1*busted.test.theta_CG;
-busted.test_Q_component_1[25][24]:=0.5074830879161225*t*busted.test.theta_AC;
-busted.test_Q_component_1[25][26]:=0.1963563685387479*t*busted.test.theta_CG;
-busted.test_Q_component_1[25][27]:=0.1989860284705866*t*busted.test.theta_CT;
-busted.test_Q_component_1[25][29]:=0.2361684149931496*t*busted.test.omega1*busted.test.theta_GT;
-busted.test_Q_component_1[25][41]:=0.2567033972679326*t*busted.test.omega1*busted.test.theta_CG;
-busted.test_Q_component_1[25][54]:=0.257146542110382*t*busted.test.omega1*busted.test.theta_CT;
-busted.test_Q_component_1[26][10]:=0.3148753970510747*t*busted.test.theta_AC;
-busted.test_Q_component_1[26][18]:=0.4256503784977386*t*busted.test.theta_AG*busted.test.omega1;
-busted.test_Q_component_1[26][22]:=0.1818409092376876*t*busted.test.omega1*busted.test.theta_CG;
-busted.test_Q_component_1[26][24]:=0.5074830879161225*t*busted.test.theta_AG;
-busted.test_Q_component_1[26][25]:=0.09717451507454297*t*busted.test.theta_CG;
-busted.test_Q_component_1[26][27]:=0.1989860284705866*t*busted.test.theta_GT;
-busted.test_Q_component_1[26][30]:=0.2361684149931496*t*busted.test.omega1*busted.test.theta_GT;
-busted.test_Q_component_1[26][42]:=0.2567033972679326*t*busted.test.omega1*busted.test.theta_CG;
-busted.test_Q_component_1[26][55]:=0.257146542110382*t*busted.test.omega1*busted.test.theta_CT;
-busted.test_Q_component_1[27][11]:=0.3148753970510747*t*busted.test.theta_AC*busted.test.omega1;
-busted.test_Q_component_1[27][19]:=0.4256503784977386*t*busted.test.theta_AG*busted.test.omega1;
-busted.test_Q_component_1[27][23]:=0.1818409092376876*t*busted.test.omega1*busted.test.theta_CG;
-busted.test_Q_component_1[27][24]:=0.5074830879161225*t*busted.test.theta_AT;
-busted.test_Q_component_1[27][25]:=0.09717451507454297*t*busted.test.theta_CT;
-busted.test_Q_component_1[27][26]:=0.1963563685387479*t*busted.test.theta_GT;
-busted.test_Q_component_1[27][31]:=0.2361684149931496*t*busted.test.omega1*busted.test.theta_GT;
-busted.test_Q_component_1[27][43]:=0.2567033972679326*t*busted.test.omega1*busted.test.theta_CG;
-busted.test_Q_component_1[27][56]:=0.257146542110382*t*busted.test.omega1*busted.test.theta_CT;
-busted.test_Q_component_1[28][12]:=0.3148753970510747*t*busted.test.theta_AC*busted.test.omega1;
-busted.test_Q_component_1[28][16]:=0.4256503784977386*t*busted.test.omega1*busted.test.theta_AT;
-busted.test_Q_component_1[28][20]:=0.1818409092376876*t*busted.test.omega1*busted.test.theta_CT;
-busted.test_Q_component_1[28][24]:=0.1563402972714242*t*busted.test.omega1*busted.test.theta_GT;
-busted.test_Q_component_1[28][29]:=0.09717451507454297*t*busted.test.theta_AC;
-busted.test_Q_component_1[28][30]:=0.1963563685387479*t*busted.test.theta_AG;
-busted.test_Q_component_1[28][31]:=0.1989860284705866*t*busted.test.theta_AT;
-busted.test_Q_component_1[28][44]:=0.2567033972679326*t*busted.test.omega1*busted.test.theta_CG;
-busted.test_Q_component_1[28][57]:=0.257146542110382*t*busted.test.theta_CT;
-busted.test_Q_component_1[29][13]:=0.3148753970510747*t*busted.test.theta_AC*busted.test.omega1;
-busted.test_Q_component_1[29][17]:=0.4256503784977386*t*busted.test.omega1*busted.test.theta_AT;
-busted.test_Q_component_1[29][21]:=0.1818409092376876*t*busted.test.omega1*busted.test.theta_CT;
-busted.test_Q_component_1[29][25]:=0.1563402972714242*t*busted.test.omega1*busted.test.theta_GT;
-busted.test_Q_component_1[29][28]:=0.5074830879161225*t*busted.test.theta_AC;
-busted.test_Q_component_1[29][30]:=0.1963563685387479*t*busted.test.theta_CG;
-busted.test_Q_component_1[29][31]:=0.1989860284705866*t*busted.test.theta_CT;
-busted.test_Q_component_1[29][45]:=0.2567033972679326*t*busted.test.omega1*busted.test.theta_CG;
-busted.test_Q_component_1[29][58]:=0.257146542110382*t*busted.test.omega1*busted.test.theta_CT;
-busted.test_Q_component_1[30][14]:=0.3148753970510747*t*busted.test.theta_AC*busted.test.omega1;
-busted.test_Q_component_1[30][18]:=0.4256503784977386*t*busted.test.omega1*busted.test.theta_AT;
-busted.test_Q_component_1[30][22]:=0.1818409092376876*t*busted.test.omega1*busted.test.theta_CT;
-busted.test_Q_component_1[30][26]:=0.1563402972714242*t*busted.test.omega1*busted.test.theta_GT;
-busted.test_Q_component_1[30][28]:=0.5074830879161225*t*busted.test.theta_AG;
-busted.test_Q_component_1[30][29]:=0.09717451507454297*t*busted.test.theta_CG;
-busted.test_Q_component_1[30][31]:=0.1989860284705866*t*busted.test.theta_GT;
-busted.test_Q_component_1[30][46]:=0.2567033972679326*t*busted.test.omega1*busted.test.theta_CG;
-busted.test_Q_component_1[30][59]:=0.257146542110382*t*busted.test.theta_CT;
-busted.test_Q_component_1[31][15]:=0.3148753970510747*t*busted.test.theta_AC*busted.test.omega1;
-busted.test_Q_component_1[31][19]:=0.4256503784977386*t*busted.test.omega1*busted.test.theta_AT;
-busted.test_Q_component_1[31][23]:=0.1818409092376876*t*busted.test.omega1*busted.test.theta_CT;
-busted.test_Q_component_1[31][27]:=0.1563402972714242*t*busted.test.omega1*busted.test.theta_GT;
-busted.test_Q_component_1[31][28]:=0.5074830879161225*t*busted.test.theta_AT;
-busted.test_Q_component_1[31][29]:=0.09717451507454297*t*busted.test.theta_CT;
-busted.test_Q_component_1[31][30]:=0.1963563685387479*t*busted.test.theta_GT;
-busted.test_Q_component_1[31][47]:=0.2567033972679326*t*busted.test.omega1*busted.test.theta_CG;
-busted.test_Q_component_1[31][60]:=0.257146542110382*t*busted.test.omega1*busted.test.theta_CT;
-busted.test_Q_component_1[32][0]:=0.3148753970510747*t*busted.test.theta_AG*busted.test.omega1;
-busted.test_Q_component_1[32][16]:=0.1712746635706107*t*busted.test.omega1*busted.test.theta_CG;
-busted.test_Q_component_1[32][33]:=0.09717451507454297*t*busted.test.theta_AC*busted.test.omega1;
-busted.test_Q_component_1[32][34]:=0.1963563685387479*t*busted.test.theta_AG;
-busted.test_Q_component_1[32][35]:=0.1989860284705866*t*busted.test.omega1*busted.test.theta_AT;
-busted.test_Q_component_1[32][36]:=0.1818409092376876*t*busted.test.theta_AC*busted.test.omega1;
-busted.test_Q_component_1[32][40]:=0.1563402972714242*t*busted.test.theta_AG*busted.test.omega1;
-busted.test_Q_component_1[32][44]:=0.2361684149931496*t*busted.test.omega1*busted.test.theta_AT;
-busted.test_Q_component_1[33][1]:=0.3148753970510747*t*busted.test.theta_AG*busted.test.omega1;
-busted.test_Q_component_1[33][17]:=0.1712746635706107*t*busted.test.omega1*busted.test.theta_CG;
-busted.test_Q_component_1[33][32]:=0.5074830879161225*t*busted.test.theta_AC*busted.test.omega1;
-busted.test_Q_component_1[33][34]:=0.1963563685387479*t*busted.test.omega1*busted.test.theta_CG;
-busted.test_Q_component_1[33][35]:=0.1989860284705866*t*busted.test.theta_CT;
-busted.test_Q_component_1[33][37]:=0.1818409092376876*t*busted.test.theta_AC*busted.test.omega1;
-busted.test_Q_component_1[33][41]:=0.1563402972714242*t*busted.test.theta_AG*busted.test.omega1;
-busted.test_Q_component_1[33][45]:=0.2361684149931496*t*busted.test.omega1*busted.test.theta_AT;
-busted.test_Q_component_1[33][48]:=0.257146542110382*t*busted.test.omega1*busted.test.theta_GT;
-busted.test_Q_component_1[34][2]:=0.3148753970510747*t*busted.test.theta_AG*busted.test.omega1;
-busted.test_Q_component_1[34][18]:=0.1712746635706107*t*busted.test.omega1*busted.test.theta_CG;
-busted.test_Q_component_1[34][32]:=0.5074830879161225*t*busted.test.theta_AG;
-busted.test_Q_component_1[34][33]:=0.09717451507454297*t*busted.test.omega1*busted.test.theta_CG;
-busted.test_Q_component_1[34][35]:=0.1989860284705866*t*busted.test.omega1*busted.test.theta_GT;
-busted.test_Q_component_1[34][38]:=0.1818409092376876*t*busted.test.theta_AC*busted.test.omega1;
-busted.test_Q_component_1[34][42]:=0.1563402972714242*t*busted.test.theta_AG*busted.test.omega1;
-busted.test_Q_component_1[34][46]:=0.2361684149931496*t*busted.test.omega1*busted.test.theta_AT;
-busted.test_Q_component_1[35][3]:=0.3148753970510747*t*busted.test.theta_AG*busted.test.omega1;
-busted.test_Q_component_1[35][19]:=0.1712746635706107*t*busted.test.omega1*busted.test.theta_CG;
-busted.test_Q_component_1[35][32]:=0.5074830879161225*t*busted.test.omega1*busted.test.theta_AT;
-busted.test_Q_component_1[35][33]:=0.09717451507454297*t*busted.test.theta_CT;
-busted.test_Q_component_1[35][34]:=0.1963563685387479*t*busted.test.omega1*busted.test.theta_GT;
-busted.test_Q_component_1[35][39]:=0.1818409092376876*t*busted.test.theta_AC*busted.test.omega1;
-busted.test_Q_component_1[35][43]:=0.1563402972714242*t*busted.test.theta_AG*busted.test.omega1;
-busted.test_Q_component_1[35][47]:=0.2361684149931496*t*busted.test.omega1*busted.test.theta_AT;
-busted.test_Q_component_1[35][49]:=0.257146542110382*t*busted.test.omega1*busted.test.theta_GT;
-busted.test_Q_component_1[36][4]:=0.3148753970510747*t*busted.test.theta_AG*busted.test.omega1;
-busted.test_Q_component_1[36][20]:=0.1712746635706107*t*busted.test.omega1*busted.test.theta_CG;
-busted.test_Q_component_1[36][32]:=0.4256503784977386*t*busted.test.theta_AC*busted.test.omega1;
-busted.test_Q_component_1[36][37]:=0.09717451507454297*t*busted.test.theta_AC;
-busted.test_Q_component_1[36][38]:=0.1963563685387479*t*busted.test.theta_AG;
-busted.test_Q_component_1[36][39]:=0.1989860284705866*t*busted.test.theta_AT;
-busted.test_Q_component_1[36][40]:=0.1563402972714242*t*busted.test.omega1*busted.test.theta_CG;
-busted.test_Q_component_1[36][44]:=0.2361684149931496*t*busted.test.omega1*busted.test.theta_CT;
-busted.test_Q_component_1[36][50]:=0.257146542110382*t*busted.test.omega1*busted.test.theta_GT;
-busted.test_Q_component_1[37][5]:=0.3148753970510747*t*busted.test.theta_AG*busted.test.omega1;
-busted.test_Q_component_1[37][21]:=0.1712746635706107*t*busted.test.omega1*busted.test.theta_CG;
-busted.test_Q_component_1[37][33]:=0.4256503784977386*t*busted.test.theta_AC*busted.test.omega1;
-busted.test_Q_component_1[37][36]:=0.5074830879161225*t*busted.test.theta_AC;
-busted.test_Q_component_1[37][38]:=0.1963563685387479*t*busted.test.theta_CG;
-busted.test_Q_component_1[37][39]:=0.1989860284705866*t*busted.test.theta_CT;
-busted.test_Q_component_1[37][41]:=0.1563402972714242*t*busted.test.omega1*busted.test.theta_CG;
-busted.test_Q_component_1[37][45]:=0.2361684149931496*t*busted.test.omega1*busted.test.theta_CT;
-busted.test_Q_component_1[37][51]:=0.257146542110382*t*busted.test.omega1*busted.test.theta_GT;
-busted.test_Q_component_1[38][6]:=0.3148753970510747*t*busted.test.theta_AG*busted.test.omega1;
-busted.test_Q_component_1[38][22]:=0.1712746635706107*t*busted.test.omega1*busted.test.theta_CG;
-busted.test_Q_component_1[38][34]:=0.4256503784977386*t*busted.test.theta_AC*busted.test.omega1;
-busted.test_Q_component_1[38][36]:=0.5074830879161225*t*busted.test.theta_AG;
-busted.test_Q_component_1[38][37]:=0.09717451507454297*t*busted.test.theta_CG;
-busted.test_Q_component_1[38][39]:=0.1989860284705866*t*busted.test.theta_GT;
-busted.test_Q_component_1[38][42]:=0.1563402972714242*t*busted.test.omega1*busted.test.theta_CG;
-busted.test_Q_component_1[38][46]:=0.2361684149931496*t*busted.test.omega1*busted.test.theta_CT;
-busted.test_Q_component_1[38][52]:=0.257146542110382*t*busted.test.omega1*busted.test.theta_GT;
-busted.test_Q_component_1[39][7]:=0.3148753970510747*t*busted.test.theta_AG*busted.test.omega1;
-busted.test_Q_component_1[39][23]:=0.1712746635706107*t*busted.test.omega1*busted.test.theta_CG;
-busted.test_Q_component_1[39][35]:=0.4256503784977386*t*busted.test.theta_AC*busted.test.omega1;
-busted.test_Q_component_1[39][36]:=0.5074830879161225*t*busted.test.theta_AT;
-busted.test_Q_component_1[39][37]:=0.09717451507454297*t*busted.test.theta_CT;
-busted.test_Q_component_1[39][38]:=0.1963563685387479*t*busted.test.theta_GT;
-busted.test_Q_component_1[39][43]:=0.1563402972714242*t*busted.test.omega1*busted.test.theta_CG;
-busted.test_Q_component_1[39][47]:=0.2361684149931496*t*busted.test.omega1*busted.test.theta_CT;
-busted.test_Q_component_1[39][53]:=0.257146542110382*t*busted.test.omega1*busted.test.theta_GT;
-busted.test_Q_component_1[40][8]:=0.3148753970510747*t*busted.test.theta_AG*busted.test.omega1;
-busted.test_Q_component_1[40][24]:=0.1712746635706107*t*busted.test.omega1*busted.test.theta_CG;
-busted.test_Q_component_1[40][32]:=0.4256503784977386*t*busted.test.theta_AG*busted.test.omega1;
-busted.test_Q_component_1[40][36]:=0.1818409092376876*t*busted.test.omega1*busted.test.theta_CG;
-busted.test_Q_component_1[40][41]:=0.09717451507454297*t*busted.test.theta_AC;
-busted.test_Q_component_1[40][42]:=0.1963563685387479*t*busted.test.theta_AG;
-busted.test_Q_component_1[40][43]:=0.1989860284705866*t*busted.test.theta_AT;
-busted.test_Q_component_1[40][44]:=0.2361684149931496*t*busted.test.omega1*busted.test.theta_GT;
-busted.test_Q_component_1[41][9]:=0.3148753970510747*t*busted.test.theta_AG*busted.test.omega1;
-busted.test_Q_component_1[41][25]:=0.1712746635706107*t*busted.test.omega1*busted.test.theta_CG;
-busted.test_Q_component_1[41][33]:=0.4256503784977386*t*busted.test.theta_AG*busted.test.omega1;
-busted.test_Q_component_1[41][37]:=0.1818409092376876*t*busted.test.omega1*busted.test.theta_CG;
-busted.test_Q_component_1[41][40]:=0.5074830879161225*t*busted.test.theta_AC;
-busted.test_Q_component_1[41][42]:=0.1963563685387479*t*busted.test.theta_CG;
-busted.test_Q_component_1[41][43]:=0.1989860284705866*t*busted.test.theta_CT;
-busted.test_Q_component_1[41][45]:=0.2361684149931496*t*busted.test.omega1*busted.test.theta_GT;
-busted.test_Q_component_1[41][54]:=0.257146542110382*t*busted.test.omega1*busted.test.theta_GT;
-busted.test_Q_component_1[42][10]:=0.3148753970510747*t*busted.test.theta_AG*busted.test.omega1;
-busted.test_Q_component_1[42][26]:=0.1712746635706107*t*busted.test.omega1*busted.test.theta_CG;
-busted.test_Q_component_1[42][34]:=0.4256503784977386*t*busted.test.theta_AG*busted.test.omega1;
-busted.test_Q_component_1[42][38]:=0.1818409092376876*t*busted.test.omega1*busted.test.theta_CG;
-busted.test_Q_component_1[42][40]:=0.5074830879161225*t*busted.test.theta_AG;
-busted.test_Q_component_1[42][41]:=0.09717451507454297*t*busted.test.theta_CG;
-busted.test_Q_component_1[42][43]:=0.1989860284705866*t*busted.test.theta_GT;
-busted.test_Q_component_1[42][46]:=0.2361684149931496*t*busted.test.omega1*busted.test.theta_GT;
-busted.test_Q_component_1[42][55]:=0.257146542110382*t*busted.test.omega1*busted.test.theta_GT;
-busted.test_Q_component_1[43][11]:=0.3148753970510747*t*busted.test.theta_AG*busted.test.omega1;
-busted.test_Q_component_1[43][27]:=0.1712746635706107*t*busted.test.omega1*busted.test.theta_CG;
-busted.test_Q_component_1[43][35]:=0.4256503784977386*t*busted.test.theta_AG*busted.test.omega1;
-busted.test_Q_component_1[43][39]:=0.1818409092376876*t*busted.test.omega1*busted.test.theta_CG;
-busted.test_Q_component_1[43][40]:=0.5074830879161225*t*busted.test.theta_AT;
-busted.test_Q_component_1[43][41]:=0.09717451507454297*t*busted.test.theta_CT;
-busted.test_Q_component_1[43][42]:=0.1963563685387479*t*busted.test.theta_GT;
-busted.test_Q_component_1[43][47]:=0.2361684149931496*t*busted.test.omega1*busted.test.theta_GT;
-busted.test_Q_component_1[43][56]:=0.257146542110382*t*busted.test.omega1*busted.test.theta_GT;
-busted.test_Q_component_1[44][12]:=0.3148753970510747*t*busted.test.theta_AG*busted.test.omega1;
-busted.test_Q_component_1[44][28]:=0.1712746635706107*t*busted.test.omega1*busted.test.theta_CG;
-busted.test_Q_component_1[44][32]:=0.4256503784977386*t*busted.test.omega1*busted.test.theta_AT;
-busted.test_Q_component_1[44][36]:=0.1818409092376876*t*busted.test.omega1*busted.test.theta_CT;
-busted.test_Q_component_1[44][40]:=0.1563402972714242*t*busted.test.omega1*busted.test.theta_GT;
-busted.test_Q_component_1[44][45]:=0.09717451507454297*t*busted.test.theta_AC;
-busted.test_Q_component_1[44][46]:=0.1963563685387479*t*busted.test.theta_AG;
-busted.test_Q_component_1[44][47]:=0.1989860284705866*t*busted.test.theta_AT;
-busted.test_Q_component_1[44][57]:=0.257146542110382*t*busted.test.omega1*busted.test.theta_GT;
-busted.test_Q_component_1[45][13]:=0.3148753970510747*t*busted.test.theta_AG*busted.test.omega1;
-busted.test_Q_component_1[45][29]:=0.1712746635706107*t*busted.test.omega1*busted.test.theta_CG;
-busted.test_Q_component_1[45][33]:=0.4256503784977386*t*busted.test.omega1*busted.test.theta_AT;
-busted.test_Q_component_1[45][37]:=0.1818409092376876*t*busted.test.omega1*busted.test.theta_CT;
-busted.test_Q_component_1[45][41]:=0.1563402972714242*t*busted.test.omega1*busted.test.theta_GT;
-busted.test_Q_component_1[45][44]:=0.5074830879161225*t*busted.test.theta_AC;
-busted.test_Q_component_1[45][46]:=0.1963563685387479*t*busted.test.theta_CG;
-busted.test_Q_component_1[45][47]:=0.1989860284705866*t*busted.test.theta_CT;
-busted.test_Q_component_1[45][58]:=0.257146542110382*t*busted.test.omega1*busted.test.theta_GT;
-busted.test_Q_component_1[46][14]:=0.3148753970510747*t*busted.test.theta_AG*busted.test.omega1;
-busted.test_Q_component_1[46][30]:=0.1712746635706107*t*busted.test.omega1*busted.test.theta_CG;
-busted.test_Q_component_1[46][34]:=0.4256503784977386*t*busted.test.omega1*busted.test.theta_AT;
-busted.test_Q_component_1[46][38]:=0.1818409092376876*t*busted.test.omega1*busted.test.theta_CT;
-busted.test_Q_component_1[46][42]:=0.1563402972714242*t*busted.test.omega1*busted.test.theta_GT;
-busted.test_Q_component_1[46][44]:=0.5074830879161225*t*busted.test.theta_AG;
-busted.test_Q_component_1[46][45]:=0.09717451507454297*t*busted.test.theta_CG;
-busted.test_Q_component_1[46][47]:=0.1989860284705866*t*busted.test.theta_GT;
-busted.test_Q_component_1[46][59]:=0.257146542110382*t*busted.test.omega1*busted.test.theta_GT;
-busted.test_Q_component_1[47][15]:=0.3148753970510747*t*busted.test.theta_AG*busted.test.omega1;
-busted.test_Q_component_1[47][31]:=0.1712746635706107*t*busted.test.omega1*busted.test.theta_CG;
-busted.test_Q_component_1[47][35]:=0.4256503784977386*t*busted.test.omega1*busted.test.theta_AT;
-busted.test_Q_component_1[47][39]:=0.1818409092376876*t*busted.test.omega1*busted.test.theta_CT;
-busted.test_Q_component_1[47][43]:=0.1563402972714242*t*busted.test.omega1*busted.test.theta_GT;
-busted.test_Q_component_1[47][44]:=0.5074830879161225*t*busted.test.theta_AT;
-busted.test_Q_component_1[47][45]:=0.09717451507454297*t*busted.test.theta_CT;
-busted.test_Q_component_1[47][46]:=0.1963563685387479*t*busted.test.theta_GT;
-busted.test_Q_component_1[47][60]:=0.257146542110382*t*busted.test.omega1*busted.test.theta_GT;
-busted.test_Q_component_1[48][1]:=0.3148753970510747*t*busted.test.omega1*busted.test.theta_AT;
-busted.test_Q_component_1[48][17]:=0.1712746635706107*t*busted.test.omega1*busted.test.theta_CT;
-busted.test_Q_component_1[48][33]:=0.2567033972679326*t*busted.test.omega1*busted.test.theta_GT;
-busted.test_Q_component_1[48][49]:=0.1989860284705866*t*busted.test.theta_CT;
-busted.test_Q_component_1[48][51]:=0.1818409092376876*t*busted.test.theta_AC*busted.test.omega1;
-busted.test_Q_component_1[48][54]:=0.1563402972714242*t*busted.test.theta_AG*busted.test.omega1;
-busted.test_Q_component_1[48][58]:=0.2361684149931496*t*busted.test.omega1*busted.test.theta_AT;
-busted.test_Q_component_1[49][3]:=0.3148753970510747*t*busted.test.omega1*busted.test.theta_AT;
-busted.test_Q_component_1[49][19]:=0.1712746635706107*t*busted.test.omega1*busted.test.theta_CT;
-busted.test_Q_component_1[49][35]:=0.2567033972679326*t*busted.test.omega1*busted.test.theta_GT;
-busted.test_Q_component_1[49][48]:=0.09717451507454297*t*busted.test.theta_CT;
-busted.test_Q_component_1[49][53]:=0.1818409092376876*t*busted.test.theta_AC*busted.test.omega1;
-busted.test_Q_component_1[49][56]:=0.1563402972714242*t*busted.test.theta_AG*busted.test.omega1;
-busted.test_Q_component_1[49][60]:=0.2361684149931496*t*busted.test.omega1*busted.test.theta_AT;
-busted.test_Q_component_1[50][4]:=0.3148753970510747*t*busted.test.omega1*busted.test.theta_AT;
-busted.test_Q_component_1[50][20]:=0.1712746635706107*t*busted.test.omega1*busted.test.theta_CT;
-busted.test_Q_component_1[50][36]:=0.2567033972679326*t*busted.test.omega1*busted.test.theta_GT;
-busted.test_Q_component_1[50][51]:=0.09717451507454297*t*busted.test.theta_AC;
-busted.test_Q_component_1[50][52]:=0.1963563685387479*t*busted.test.theta_AG;
-busted.test_Q_component_1[50][53]:=0.1989860284705866*t*busted.test.theta_AT;
-busted.test_Q_component_1[50][57]:=0.2361684149931496*t*busted.test.omega1*busted.test.theta_CT;
-busted.test_Q_component_1[51][5]:=0.3148753970510747*t*busted.test.omega1*busted.test.theta_AT;
-busted.test_Q_component_1[51][21]:=0.1712746635706107*t*busted.test.omega1*busted.test.theta_CT;
-busted.test_Q_component_1[51][37]:=0.2567033972679326*t*busted.test.omega1*busted.test.theta_GT;
-busted.test_Q_component_1[51][48]:=0.4256503784977386*t*busted.test.theta_AC*busted.test.omega1;
-busted.test_Q_component_1[51][50]:=0.5074830879161225*t*busted.test.theta_AC;
-busted.test_Q_component_1[51][52]:=0.1963563685387479*t*busted.test.theta_CG;
-busted.test_Q_component_1[51][53]:=0.1989860284705866*t*busted.test.theta_CT;
-busted.test_Q_component_1[51][54]:=0.1563402972714242*t*busted.test.omega1*busted.test.theta_CG;
-busted.test_Q_component_1[51][58]:=0.2361684149931496*t*busted.test.omega1*busted.test.theta_CT;
-busted.test_Q_component_1[52][6]:=0.3148753970510747*t*busted.test.omega1*busted.test.theta_AT;
-busted.test_Q_component_1[52][22]:=0.1712746635706107*t*busted.test.omega1*busted.test.theta_CT;
-busted.test_Q_component_1[52][38]:=0.2567033972679326*t*busted.test.omega1*busted.test.theta_GT;
-busted.test_Q_component_1[52][50]:=0.5074830879161225*t*busted.test.theta_AG;
-busted.test_Q_component_1[52][51]:=0.09717451507454297*t*busted.test.theta_CG;
-busted.test_Q_component_1[52][53]:=0.1989860284705866*t*busted.test.theta_GT;
-busted.test_Q_component_1[52][55]:=0.1563402972714242*t*busted.test.omega1*busted.test.theta_CG;
-busted.test_Q_component_1[52][59]:=0.2361684149931496*t*busted.test.omega1*busted.test.theta_CT;
-busted.test_Q_component_1[53][7]:=0.3148753970510747*t*busted.test.omega1*busted.test.theta_AT;
-busted.test_Q_component_1[53][23]:=0.1712746635706107*t*busted.test.omega1*busted.test.theta_CT;
-busted.test_Q_component_1[53][39]:=0.2567033972679326*t*busted.test.omega1*busted.test.theta_GT;
-busted.test_Q_component_1[53][49]:=0.4256503784977386*t*busted.test.theta_AC*busted.test.omega1;
-busted.test_Q_component_1[53][50]:=0.5074830879161225*t*busted.test.theta_AT;
-busted.test_Q_component_1[53][51]:=0.09717451507454297*t*busted.test.theta_CT;
-busted.test_Q_component_1[53][52]:=0.1963563685387479*t*busted.test.theta_GT;
-busted.test_Q_component_1[53][56]:=0.1563402972714242*t*busted.test.omega1*busted.test.theta_CG;
-busted.test_Q_component_1[53][60]:=0.2361684149931496*t*busted.test.omega1*busted.test.theta_CT;
-busted.test_Q_component_1[54][9]:=0.3148753970510747*t*busted.test.omega1*busted.test.theta_AT;
-busted.test_Q_component_1[54][25]:=0.1712746635706107*t*busted.test.omega1*busted.test.theta_CT;
-busted.test_Q_component_1[54][41]:=0.2567033972679326*t*busted.test.omega1*busted.test.theta_GT;
-busted.test_Q_component_1[54][48]:=0.4256503784977386*t*busted.test.theta_AG*busted.test.omega1;
-busted.test_Q_component_1[54][51]:=0.1818409092376876*t*busted.test.omega1*busted.test.theta_CG;
-busted.test_Q_component_1[54][55]:=0.1963563685387479*t*busted.test.omega1*busted.test.theta_CG;
-busted.test_Q_component_1[54][56]:=0.1989860284705866*t*busted.test.theta_CT;
-busted.test_Q_component_1[54][58]:=0.2361684149931496*t*busted.test.omega1*busted.test.theta_GT;
-busted.test_Q_component_1[55][10]:=0.3148753970510747*t*busted.test.omega1*busted.test.theta_AT;
-busted.test_Q_component_1[55][26]:=0.1712746635706107*t*busted.test.omega1*busted.test.theta_CT;
-busted.test_Q_component_1[55][42]:=0.2567033972679326*t*busted.test.omega1*busted.test.theta_GT;
-busted.test_Q_component_1[55][52]:=0.1818409092376876*t*busted.test.omega1*busted.test.theta_CG;
-busted.test_Q_component_1[55][54]:=0.09717451507454297*t*busted.test.omega1*busted.test.theta_CG;
-busted.test_Q_component_1[55][56]:=0.1989860284705866*t*busted.test.omega1*busted.test.theta_GT;
-busted.test_Q_component_1[55][59]:=0.2361684149931496*t*busted.test.omega1*busted.test.theta_GT;
-busted.test_Q_component_1[56][11]:=0.3148753970510747*t*busted.test.omega1*busted.test.theta_AT;
-busted.test_Q_component_1[56][27]:=0.1712746635706107*t*busted.test.omega1*busted.test.theta_CT;
-busted.test_Q_component_1[56][43]:=0.2567033972679326*t*busted.test.omega1*busted.test.theta_GT;
-busted.test_Q_component_1[56][49]:=0.4256503784977386*t*busted.test.theta_AG*busted.test.omega1;
-busted.test_Q_component_1[56][53]:=0.1818409092376876*t*busted.test.omega1*busted.test.theta_CG;
-busted.test_Q_component_1[56][54]:=0.09717451507454297*t*busted.test.theta_CT;
-busted.test_Q_component_1[56][55]:=0.1963563685387479*t*busted.test.omega1*busted.test.theta_GT;
-busted.test_Q_component_1[56][60]:=0.2361684149931496*t*busted.test.omega1*busted.test.theta_GT;
-busted.test_Q_component_1[57][12]:=0.3148753970510747*t*busted.test.omega1*busted.test.theta_AT;
-busted.test_Q_component_1[57][28]:=0.1712746635706107*t*busted.test.theta_CT;
-busted.test_Q_component_1[57][44]:=0.2567033972679326*t*busted.test.omega1*busted.test.theta_GT;
-busted.test_Q_component_1[57][50]:=0.1818409092376876*t*busted.test.omega1*busted.test.theta_CT;
-busted.test_Q_component_1[57][58]:=0.09717451507454297*t*busted.test.theta_AC*busted.test.omega1;
-busted.test_Q_component_1[57][59]:=0.1963563685387479*t*busted.test.theta_AG;
-busted.test_Q_component_1[57][60]:=0.1989860284705866*t*busted.test.omega1*busted.test.theta_AT;
-busted.test_Q_component_1[58][13]:=0.3148753970510747*t*busted.test.omega1*busted.test.theta_AT;
-busted.test_Q_component_1[58][29]:=0.1712746635706107*t*busted.test.omega1*busted.test.theta_CT;
-busted.test_Q_component_1[58][45]:=0.2567033972679326*t*busted.test.omega1*busted.test.theta_GT;
-busted.test_Q_component_1[58][48]:=0.4256503784977386*t*busted.test.omega1*busted.test.theta_AT;
-busted.test_Q_component_1[58][51]:=0.1818409092376876*t*busted.test.omega1*busted.test.theta_CT;
-busted.test_Q_component_1[58][54]:=0.1563402972714242*t*busted.test.omega1*busted.test.theta_GT;
-busted.test_Q_component_1[58][57]:=0.5074830879161225*t*busted.test.theta_AC*busted.test.omega1;
-busted.test_Q_component_1[58][59]:=0.1963563685387479*t*busted.test.omega1*busted.test.theta_CG;
-busted.test_Q_component_1[58][60]:=0.1989860284705866*t*busted.test.theta_CT;
-busted.test_Q_component_1[59][14]:=0.3148753970510747*t*busted.test.omega1*busted.test.theta_AT;
-busted.test_Q_component_1[59][30]:=0.1712746635706107*t*busted.test.theta_CT;
-busted.test_Q_component_1[59][46]:=0.2567033972679326*t*busted.test.omega1*busted.test.theta_GT;
-busted.test_Q_component_1[59][52]:=0.1818409092376876*t*busted.test.omega1*busted.test.theta_CT;
-busted.test_Q_component_1[59][55]:=0.1563402972714242*t*busted.test.omega1*busted.test.theta_GT;
-busted.test_Q_component_1[59][57]:=0.5074830879161225*t*busted.test.theta_AG;
-busted.test_Q_component_1[59][58]:=0.09717451507454297*t*busted.test.omega1*busted.test.theta_CG;
-busted.test_Q_component_1[59][60]:=0.1989860284705866*t*busted.test.omega1*busted.test.theta_GT;
-busted.test_Q_component_1[60][15]:=0.3148753970510747*t*busted.test.omega1*busted.test.theta_AT;
-busted.test_Q_component_1[60][31]:=0.1712746635706107*t*busted.test.omega1*busted.test.theta_CT;
-busted.test_Q_component_1[60][47]:=0.2567033972679326*t*busted.test.omega1*busted.test.theta_GT;
-busted.test_Q_component_1[60][49]:=0.4256503784977386*t*busted.test.omega1*busted.test.theta_AT;
-busted.test_Q_component_1[60][53]:=0.1818409092376876*t*busted.test.omega1*busted.test.theta_CT;
-busted.test_Q_component_1[60][56]:=0.1563402972714242*t*busted.test.omega1*busted.test.theta_GT;
-busted.test_Q_component_1[60][57]:=0.5074830879161225*t*busted.test.omega1*busted.test.theta_AT;
-busted.test_Q_component_1[60][58]:=0.09717451507454297*t*busted.test.theta_CT;
-busted.test_Q_component_1[60][59]:=0.1963563685387479*t*busted.test.omega1*busted.test.theta_GT;
-
-
-busted.test_Q_component_2={61,61};
-busted.test_Q_component_2[0][1]:=0.09717451507454297*t*busted.test.theta_AC*busted.test.omega2;
-busted.test_Q_component_2[0][2]:=0.1963563685387479*t*busted.test.theta_AG;
-busted.test_Q_component_2[0][3]:=0.1989860284705866*t*busted.test.theta_AT*busted.test.omega2;
-busted.test_Q_component_2[0][4]:=0.1818409092376876*t*busted.test.theta_AC*busted.test.omega2;
-busted.test_Q_component_2[0][8]:=0.1563402972714242*t*busted.test.theta_AG*busted.test.omega2;
-busted.test_Q_component_2[0][12]:=0.2361684149931496*t*busted.test.theta_AT*busted.test.omega2;
-busted.test_Q_component_2[0][16]:=0.1712746635706107*t*busted.test.theta_AC*busted.test.omega2;
-busted.test_Q_component_2[0][32]:=0.2567033972679326*t*busted.test.theta_AG*busted.test.omega2;
-busted.test_Q_component_2[1][0]:=0.5074830879161225*t*busted.test.theta_AC*busted.test.omega2;
-busted.test_Q_component_2[1][2]:=0.1963563685387479*t*busted.test.theta_CG*busted.test.omega2;
-busted.test_Q_component_2[1][3]:=0.1989860284705866*t*busted.test.theta_CT;
-busted.test_Q_component_2[1][5]:=0.1818409092376876*t*busted.test.theta_AC*busted.test.omega2;
-busted.test_Q_component_2[1][9]:=0.1563402972714242*t*busted.test.theta_AG*busted.test.omega2;
-busted.test_Q_component_2[1][13]:=0.2361684149931496*t*busted.test.theta_AT*busted.test.omega2;
-busted.test_Q_component_2[1][17]:=0.1712746635706107*t*busted.test.theta_AC*busted.test.omega2;
-busted.test_Q_component_2[1][33]:=0.2567033972679326*t*busted.test.theta_AG*busted.test.omega2;
-busted.test_Q_component_2[1][48]:=0.257146542110382*t*busted.test.theta_AT*busted.test.omega2;
-busted.test_Q_component_2[2][0]:=0.5074830879161225*t*busted.test.theta_AG;
-busted.test_Q_component_2[2][1]:=0.09717451507454297*t*busted.test.theta_CG*busted.test.omega2;
-busted.test_Q_component_2[2][3]:=0.1989860284705866*t*busted.test.theta_GT*busted.test.omega2;
-busted.test_Q_component_2[2][6]:=0.1818409092376876*t*busted.test.theta_AC*busted.test.omega2;
-busted.test_Q_component_2[2][10]:=0.1563402972714242*t*busted.test.theta_AG*busted.test.omega2;
-busted.test_Q_component_2[2][14]:=0.2361684149931496*t*busted.test.theta_AT*busted.test.omega2;
-busted.test_Q_component_2[2][18]:=0.1712746635706107*t*busted.test.theta_AC*busted.test.omega2;
-busted.test_Q_component_2[2][34]:=0.2567033972679326*t*busted.test.theta_AG*busted.test.omega2;
-busted.test_Q_component_2[3][0]:=0.5074830879161225*t*busted.test.theta_AT*busted.test.omega2;
-busted.test_Q_component_2[3][1]:=0.09717451507454297*t*busted.test.theta_CT;
-busted.test_Q_component_2[3][2]:=0.1963563685387479*t*busted.test.theta_GT*busted.test.omega2;
-busted.test_Q_component_2[3][7]:=0.1818409092376876*t*busted.test.theta_AC*busted.test.omega2;
-busted.test_Q_component_2[3][11]:=0.1563402972714242*t*busted.test.theta_AG*busted.test.omega2;
-busted.test_Q_component_2[3][15]:=0.2361684149931496*t*busted.test.theta_AT*busted.test.omega2;
-busted.test_Q_component_2[3][19]:=0.1712746635706107*t*busted.test.theta_AC*busted.test.omega2;
-busted.test_Q_component_2[3][35]:=0.2567033972679326*t*busted.test.theta_AG*busted.test.omega2;
-busted.test_Q_component_2[3][49]:=0.257146542110382*t*busted.test.theta_AT*busted.test.omega2;
-busted.test_Q_component_2[4][0]:=0.4256503784977386*t*busted.test.theta_AC*busted.test.omega2;
-busted.test_Q_component_2[4][5]:=0.09717451507454297*t*busted.test.theta_AC;
-busted.test_Q_component_2[4][6]:=0.1963563685387479*t*busted.test.theta_AG;
-busted.test_Q_component_2[4][7]:=0.1989860284705866*t*busted.test.theta_AT;
-busted.test_Q_component_2[4][8]:=0.1563402972714242*t*busted.test.theta_CG*busted.test.omega2;
-busted.test_Q_component_2[4][12]:=0.2361684149931496*t*busted.test.theta_CT*busted.test.omega2;
-busted.test_Q_component_2[4][20]:=0.1712746635706107*t*busted.test.theta_AC*busted.test.omega2;
-busted.test_Q_component_2[4][36]:=0.2567033972679326*t*busted.test.theta_AG*busted.test.omega2;
-busted.test_Q_component_2[4][50]:=0.257146542110382*t*busted.test.theta_AT*busted.test.omega2;
-busted.test_Q_component_2[5][1]:=0.4256503784977386*t*busted.test.theta_AC*busted.test.omega2;
-busted.test_Q_component_2[5][4]:=0.5074830879161225*t*busted.test.theta_AC;
-busted.test_Q_component_2[5][6]:=0.1963563685387479*t*busted.test.theta_CG;
-busted.test_Q_component_2[5][7]:=0.1989860284705866*t*busted.test.theta_CT;
-busted.test_Q_component_2[5][9]:=0.1563402972714242*t*busted.test.theta_CG*busted.test.omega2;
-busted.test_Q_component_2[5][13]:=0.2361684149931496*t*busted.test.theta_CT*busted.test.omega2;
-busted.test_Q_component_2[5][21]:=0.1712746635706107*t*busted.test.theta_AC*busted.test.omega2;
-busted.test_Q_component_2[5][37]:=0.2567033972679326*t*busted.test.theta_AG*busted.test.omega2;
-busted.test_Q_component_2[5][51]:=0.257146542110382*t*busted.test.theta_AT*busted.test.omega2;
-busted.test_Q_component_2[6][2]:=0.4256503784977386*t*busted.test.theta_AC*busted.test.omega2;
-busted.test_Q_component_2[6][4]:=0.5074830879161225*t*busted.test.theta_AG;
-busted.test_Q_component_2[6][5]:=0.09717451507454297*t*busted.test.theta_CG;
-busted.test_Q_component_2[6][7]:=0.1989860284705866*t*busted.test.theta_GT;
-busted.test_Q_component_2[6][10]:=0.1563402972714242*t*busted.test.theta_CG*busted.test.omega2;
-busted.test_Q_component_2[6][14]:=0.2361684149931496*t*busted.test.theta_CT*busted.test.omega2;
-busted.test_Q_component_2[6][22]:=0.1712746635706107*t*busted.test.theta_AC*busted.test.omega2;
-busted.test_Q_component_2[6][38]:=0.2567033972679326*t*busted.test.theta_AG*busted.test.omega2;
-busted.test_Q_component_2[6][52]:=0.257146542110382*t*busted.test.theta_AT*busted.test.omega2;
-busted.test_Q_component_2[7][3]:=0.4256503784977386*t*busted.test.theta_AC*busted.test.omega2;
-busted.test_Q_component_2[7][4]:=0.5074830879161225*t*busted.test.theta_AT;
-busted.test_Q_component_2[7][5]:=0.09717451507454297*t*busted.test.theta_CT;
-busted.test_Q_component_2[7][6]:=0.1963563685387479*t*busted.test.theta_GT;
-busted.test_Q_component_2[7][11]:=0.1563402972714242*t*busted.test.theta_CG*busted.test.omega2;
-busted.test_Q_component_2[7][15]:=0.2361684149931496*t*busted.test.theta_CT*busted.test.omega2;
-busted.test_Q_component_2[7][23]:=0.1712746635706107*t*busted.test.theta_AC*busted.test.omega2;
-busted.test_Q_component_2[7][39]:=0.2567033972679326*t*busted.test.theta_AG*busted.test.omega2;
-busted.test_Q_component_2[7][53]:=0.257146542110382*t*busted.test.theta_AT*busted.test.omega2;
-busted.test_Q_component_2[8][0]:=0.4256503784977386*t*busted.test.theta_AG*busted.test.omega2;
-busted.test_Q_component_2[8][4]:=0.1818409092376876*t*busted.test.theta_CG*busted.test.omega2;
-busted.test_Q_component_2[8][9]:=0.09717451507454297*t*busted.test.theta_AC*busted.test.omega2;
-busted.test_Q_component_2[8][10]:=0.1963563685387479*t*busted.test.theta_AG;
-busted.test_Q_component_2[8][11]:=0.1989860284705866*t*busted.test.theta_AT*busted.test.omega2;
-busted.test_Q_component_2[8][12]:=0.2361684149931496*t*busted.test.theta_GT*busted.test.omega2;
-busted.test_Q_component_2[8][24]:=0.1712746635706107*t*busted.test.theta_AC;
-busted.test_Q_component_2[8][40]:=0.2567033972679326*t*busted.test.theta_AG*busted.test.omega2;
-busted.test_Q_component_2[9][1]:=0.4256503784977386*t*busted.test.theta_AG*busted.test.omega2;
-busted.test_Q_component_2[9][5]:=0.1818409092376876*t*busted.test.theta_CG*busted.test.omega2;
-busted.test_Q_component_2[9][8]:=0.5074830879161225*t*busted.test.theta_AC*busted.test.omega2;
-busted.test_Q_component_2[9][10]:=0.1963563685387479*t*busted.test.theta_CG*busted.test.omega2;
-busted.test_Q_component_2[9][11]:=0.1989860284705866*t*busted.test.theta_CT;
-busted.test_Q_component_2[9][13]:=0.2361684149931496*t*busted.test.theta_GT*busted.test.omega2;
-busted.test_Q_component_2[9][25]:=0.1712746635706107*t*busted.test.theta_AC*busted.test.omega2;
-busted.test_Q_component_2[9][41]:=0.2567033972679326*t*busted.test.theta_AG*busted.test.omega2;
-busted.test_Q_component_2[9][54]:=0.257146542110382*t*busted.test.theta_AT*busted.test.omega2;
-busted.test_Q_component_2[10][2]:=0.4256503784977386*t*busted.test.theta_AG*busted.test.omega2;
-busted.test_Q_component_2[10][6]:=0.1818409092376876*t*busted.test.theta_CG*busted.test.omega2;
-busted.test_Q_component_2[10][8]:=0.5074830879161225*t*busted.test.theta_AG;
-busted.test_Q_component_2[10][9]:=0.09717451507454297*t*busted.test.theta_CG*busted.test.omega2;
-busted.test_Q_component_2[10][11]:=0.1989860284705866*t*busted.test.theta_GT*busted.test.omega2;
-busted.test_Q_component_2[10][14]:=0.2361684149931496*t*busted.test.theta_GT*busted.test.omega2;
-busted.test_Q_component_2[10][26]:=0.1712746635706107*t*busted.test.theta_AC;
-busted.test_Q_component_2[10][42]:=0.2567033972679326*t*busted.test.theta_AG*busted.test.omega2;
-busted.test_Q_component_2[10][55]:=0.257146542110382*t*busted.test.theta_AT*busted.test.omega2;
-busted.test_Q_component_2[11][3]:=0.4256503784977386*t*busted.test.theta_AG*busted.test.omega2;
-busted.test_Q_component_2[11][7]:=0.1818409092376876*t*busted.test.theta_CG*busted.test.omega2;
-busted.test_Q_component_2[11][8]:=0.5074830879161225*t*busted.test.theta_AT*busted.test.omega2;
-busted.test_Q_component_2[11][9]:=0.09717451507454297*t*busted.test.theta_CT;
-busted.test_Q_component_2[11][10]:=0.1963563685387479*t*busted.test.theta_GT*busted.test.omega2;
-busted.test_Q_component_2[11][15]:=0.2361684149931496*t*busted.test.theta_GT*busted.test.omega2;
-busted.test_Q_component_2[11][27]:=0.1712746635706107*t*busted.test.theta_AC*busted.test.omega2;
-busted.test_Q_component_2[11][43]:=0.2567033972679326*t*busted.test.theta_AG*busted.test.omega2;
-busted.test_Q_component_2[11][56]:=0.257146542110382*t*busted.test.theta_AT*busted.test.omega2;
-busted.test_Q_component_2[12][0]:=0.4256503784977386*t*busted.test.theta_AT*busted.test.omega2;
-busted.test_Q_component_2[12][4]:=0.1818409092376876*t*busted.test.theta_CT*busted.test.omega2;
-busted.test_Q_component_2[12][8]:=0.1563402972714242*t*busted.test.theta_GT*busted.test.omega2;
-busted.test_Q_component_2[12][13]:=0.09717451507454297*t*busted.test.theta_AC;
-busted.test_Q_component_2[12][14]:=0.1963563685387479*t*busted.test.theta_AG*busted.test.omega2;
-busted.test_Q_component_2[12][15]:=0.1989860284705866*t*busted.test.theta_AT;
-busted.test_Q_component_2[12][28]:=0.1712746635706107*t*busted.test.theta_AC*busted.test.omega2;
-busted.test_Q_component_2[12][44]:=0.2567033972679326*t*busted.test.theta_AG*busted.test.omega2;
-busted.test_Q_component_2[12][57]:=0.257146542110382*t*busted.test.theta_AT*busted.test.omega2;
-busted.test_Q_component_2[13][1]:=0.4256503784977386*t*busted.test.theta_AT*busted.test.omega2;
-busted.test_Q_component_2[13][5]:=0.1818409092376876*t*busted.test.theta_CT*busted.test.omega2;
-busted.test_Q_component_2[13][9]:=0.1563402972714242*t*busted.test.theta_GT*busted.test.omega2;
-busted.test_Q_component_2[13][12]:=0.5074830879161225*t*busted.test.theta_AC;
-busted.test_Q_component_2[13][14]:=0.1963563685387479*t*busted.test.theta_CG*busted.test.omega2;
-busted.test_Q_component_2[13][15]:=0.1989860284705866*t*busted.test.theta_CT;
-busted.test_Q_component_2[13][29]:=0.1712746635706107*t*busted.test.theta_AC*busted.test.omega2;
-busted.test_Q_component_2[13][45]:=0.2567033972679326*t*busted.test.theta_AG*busted.test.omega2;
-busted.test_Q_component_2[13][58]:=0.257146542110382*t*busted.test.theta_AT*busted.test.omega2;
-busted.test_Q_component_2[14][2]:=0.4256503784977386*t*busted.test.theta_AT*busted.test.omega2;
-busted.test_Q_component_2[14][6]:=0.1818409092376876*t*busted.test.theta_CT*busted.test.omega2;
-busted.test_Q_component_2[14][10]:=0.1563402972714242*t*busted.test.theta_GT*busted.test.omega2;
-busted.test_Q_component_2[14][12]:=0.5074830879161225*t*busted.test.theta_AG*busted.test.omega2;
-busted.test_Q_component_2[14][13]:=0.09717451507454297*t*busted.test.theta_CG*busted.test.omega2;
-busted.test_Q_component_2[14][15]:=0.1989860284705866*t*busted.test.theta_GT*busted.test.omega2;
-busted.test_Q_component_2[14][30]:=0.1712746635706107*t*busted.test.theta_AC*busted.test.omega2;
-busted.test_Q_component_2[14][46]:=0.2567033972679326*t*busted.test.theta_AG*busted.test.omega2;
-busted.test_Q_component_2[14][59]:=0.257146542110382*t*busted.test.theta_AT*busted.test.omega2;
-busted.test_Q_component_2[15][3]:=0.4256503784977386*t*busted.test.theta_AT*busted.test.omega2;
-busted.test_Q_component_2[15][7]:=0.1818409092376876*t*busted.test.theta_CT*busted.test.omega2;
-busted.test_Q_component_2[15][11]:=0.1563402972714242*t*busted.test.theta_GT*busted.test.omega2;
-busted.test_Q_component_2[15][12]:=0.5074830879161225*t*busted.test.theta_AT;
-busted.test_Q_component_2[15][13]:=0.09717451507454297*t*busted.test.theta_CT;
-busted.test_Q_component_2[15][14]:=0.1963563685387479*t*busted.test.theta_GT*busted.test.omega2;
-busted.test_Q_component_2[15][31]:=0.1712746635706107*t*busted.test.theta_AC*busted.test.omega2;
-busted.test_Q_component_2[15][47]:=0.2567033972679326*t*busted.test.theta_AG*busted.test.omega2;
-busted.test_Q_component_2[15][60]:=0.257146542110382*t*busted.test.theta_AT*busted.test.omega2;
-busted.test_Q_component_2[16][0]:=0.3148753970510747*t*busted.test.theta_AC*busted.test.omega2;
-busted.test_Q_component_2[16][17]:=0.09717451507454297*t*busted.test.theta_AC*busted.test.omega2;
-busted.test_Q_component_2[16][18]:=0.1963563685387479*t*busted.test.theta_AG;
-busted.test_Q_component_2[16][19]:=0.1989860284705866*t*busted.test.theta_AT*busted.test.omega2;
-busted.test_Q_component_2[16][20]:=0.1818409092376876*t*busted.test.theta_AC*busted.test.omega2;
-busted.test_Q_component_2[16][24]:=0.1563402972714242*t*busted.test.theta_AG*busted.test.omega2;
-busted.test_Q_component_2[16][28]:=0.2361684149931496*t*busted.test.theta_AT*busted.test.omega2;
-busted.test_Q_component_2[16][32]:=0.2567033972679326*t*busted.test.theta_CG*busted.test.omega2;
-busted.test_Q_component_2[17][1]:=0.3148753970510747*t*busted.test.theta_AC*busted.test.omega2;
-busted.test_Q_component_2[17][16]:=0.5074830879161225*t*busted.test.theta_AC*busted.test.omega2;
-busted.test_Q_component_2[17][18]:=0.1963563685387479*t*busted.test.theta_CG*busted.test.omega2;
-busted.test_Q_component_2[17][19]:=0.1989860284705866*t*busted.test.theta_CT;
-busted.test_Q_component_2[17][21]:=0.1818409092376876*t*busted.test.theta_AC*busted.test.omega2;
-busted.test_Q_component_2[17][25]:=0.1563402972714242*t*busted.test.theta_AG*busted.test.omega2;
-busted.test_Q_component_2[17][29]:=0.2361684149931496*t*busted.test.theta_AT*busted.test.omega2;
-busted.test_Q_component_2[17][33]:=0.2567033972679326*t*busted.test.theta_CG*busted.test.omega2;
-busted.test_Q_component_2[17][48]:=0.257146542110382*t*busted.test.theta_CT*busted.test.omega2;
-busted.test_Q_component_2[18][2]:=0.3148753970510747*t*busted.test.theta_AC*busted.test.omega2;
-busted.test_Q_component_2[18][16]:=0.5074830879161225*t*busted.test.theta_AG;
-busted.test_Q_component_2[18][17]:=0.09717451507454297*t*busted.test.theta_CG*busted.test.omega2;
-busted.test_Q_component_2[18][19]:=0.1989860284705866*t*busted.test.theta_GT*busted.test.omega2;
-busted.test_Q_component_2[18][22]:=0.1818409092376876*t*busted.test.theta_AC*busted.test.omega2;
-busted.test_Q_component_2[18][26]:=0.1563402972714242*t*busted.test.theta_AG*busted.test.omega2;
-busted.test_Q_component_2[18][30]:=0.2361684149931496*t*busted.test.theta_AT*busted.test.omega2;
-busted.test_Q_component_2[18][34]:=0.2567033972679326*t*busted.test.theta_CG*busted.test.omega2;
-busted.test_Q_component_2[19][3]:=0.3148753970510747*t*busted.test.theta_AC*busted.test.omega2;
-busted.test_Q_component_2[19][16]:=0.5074830879161225*t*busted.test.theta_AT*busted.test.omega2;
-busted.test_Q_component_2[19][17]:=0.09717451507454297*t*busted.test.theta_CT;
-busted.test_Q_component_2[19][18]:=0.1963563685387479*t*busted.test.theta_GT*busted.test.omega2;
-busted.test_Q_component_2[19][23]:=0.1818409092376876*t*busted.test.theta_AC*busted.test.omega2;
-busted.test_Q_component_2[19][27]:=0.1563402972714242*t*busted.test.theta_AG*busted.test.omega2;
-busted.test_Q_component_2[19][31]:=0.2361684149931496*t*busted.test.theta_AT*busted.test.omega2;
-busted.test_Q_component_2[19][35]:=0.2567033972679326*t*busted.test.theta_CG*busted.test.omega2;
-busted.test_Q_component_2[19][49]:=0.257146542110382*t*busted.test.theta_CT*busted.test.omega2;
-busted.test_Q_component_2[20][4]:=0.3148753970510747*t*busted.test.theta_AC*busted.test.omega2;
-busted.test_Q_component_2[20][16]:=0.4256503784977386*t*busted.test.theta_AC*busted.test.omega2;
-busted.test_Q_component_2[20][21]:=0.09717451507454297*t*busted.test.theta_AC;
-busted.test_Q_component_2[20][22]:=0.1963563685387479*t*busted.test.theta_AG;
-busted.test_Q_component_2[20][23]:=0.1989860284705866*t*busted.test.theta_AT;
-busted.test_Q_component_2[20][24]:=0.1563402972714242*t*busted.test.theta_CG*busted.test.omega2;
-busted.test_Q_component_2[20][28]:=0.2361684149931496*t*busted.test.theta_CT*busted.test.omega2;
-busted.test_Q_component_2[20][36]:=0.2567033972679326*t*busted.test.theta_CG*busted.test.omega2;
-busted.test_Q_component_2[20][50]:=0.257146542110382*t*busted.test.theta_CT*busted.test.omega2;
-busted.test_Q_component_2[21][5]:=0.3148753970510747*t*busted.test.theta_AC*busted.test.omega2;
-busted.test_Q_component_2[21][17]:=0.4256503784977386*t*busted.test.theta_AC*busted.test.omega2;
-busted.test_Q_component_2[21][20]:=0.5074830879161225*t*busted.test.theta_AC;
-busted.test_Q_component_2[21][22]:=0.1963563685387479*t*busted.test.theta_CG;
-busted.test_Q_component_2[21][23]:=0.1989860284705866*t*busted.test.theta_CT;
-busted.test_Q_component_2[21][25]:=0.1563402972714242*t*busted.test.theta_CG*busted.test.omega2;
-busted.test_Q_component_2[21][29]:=0.2361684149931496*t*busted.test.theta_CT*busted.test.omega2;
-busted.test_Q_component_2[21][37]:=0.2567033972679326*t*busted.test.theta_CG*busted.test.omega2;
-busted.test_Q_component_2[21][51]:=0.257146542110382*t*busted.test.theta_CT*busted.test.omega2;
-busted.test_Q_component_2[22][6]:=0.3148753970510747*t*busted.test.theta_AC*busted.test.omega2;
-busted.test_Q_component_2[22][18]:=0.4256503784977386*t*busted.test.theta_AC*busted.test.omega2;
-busted.test_Q_component_2[22][20]:=0.5074830879161225*t*busted.test.theta_AG;
-busted.test_Q_component_2[22][21]:=0.09717451507454297*t*busted.test.theta_CG;
-busted.test_Q_component_2[22][23]:=0.1989860284705866*t*busted.test.theta_GT;
-busted.test_Q_component_2[22][26]:=0.1563402972714242*t*busted.test.theta_CG*busted.test.omega2;
-busted.test_Q_component_2[22][30]:=0.2361684149931496*t*busted.test.theta_CT*busted.test.omega2;
-busted.test_Q_component_2[22][38]:=0.2567033972679326*t*busted.test.theta_CG*busted.test.omega2;
-busted.test_Q_component_2[22][52]:=0.257146542110382*t*busted.test.theta_CT*busted.test.omega2;
-busted.test_Q_component_2[23][7]:=0.3148753970510747*t*busted.test.theta_AC*busted.test.omega2;
-busted.test_Q_component_2[23][19]:=0.4256503784977386*t*busted.test.theta_AC*busted.test.omega2;
-busted.test_Q_component_2[23][20]:=0.5074830879161225*t*busted.test.theta_AT;
-busted.test_Q_component_2[23][21]:=0.09717451507454297*t*busted.test.theta_CT;
-busted.test_Q_component_2[23][22]:=0.1963563685387479*t*busted.test.theta_GT;
-busted.test_Q_component_2[23][27]:=0.1563402972714242*t*busted.test.theta_CG*busted.test.omega2;
-busted.test_Q_component_2[23][31]:=0.2361684149931496*t*busted.test.theta_CT*busted.test.omega2;
-busted.test_Q_component_2[23][39]:=0.2567033972679326*t*busted.test.theta_CG*busted.test.omega2;
-busted.test_Q_component_2[23][53]:=0.257146542110382*t*busted.test.theta_CT*busted.test.omega2;
-busted.test_Q_component_2[24][8]:=0.3148753970510747*t*busted.test.theta_AC;
-busted.test_Q_component_2[24][16]:=0.4256503784977386*t*busted.test.theta_AG*busted.test.omega2;
-busted.test_Q_component_2[24][20]:=0.1818409092376876*t*busted.test.theta_CG*busted.test.omega2;
-busted.test_Q_component_2[24][25]:=0.09717451507454297*t*busted.test.theta_AC;
-busted.test_Q_component_2[24][26]:=0.1963563685387479*t*busted.test.theta_AG;
-busted.test_Q_component_2[24][27]:=0.1989860284705866*t*busted.test.theta_AT;
-busted.test_Q_component_2[24][28]:=0.2361684149931496*t*busted.test.theta_GT*busted.test.omega2;
-busted.test_Q_component_2[24][40]:=0.2567033972679326*t*busted.test.theta_CG*busted.test.omega2;
-busted.test_Q_component_2[25][9]:=0.3148753970510747*t*busted.test.theta_AC*busted.test.omega2;
-busted.test_Q_component_2[25][17]:=0.4256503784977386*t*busted.test.theta_AG*busted.test.omega2;
-busted.test_Q_component_2[25][21]:=0.1818409092376876*t*busted.test.theta_CG*busted.test.omega2;
-busted.test_Q_component_2[25][24]:=0.5074830879161225*t*busted.test.theta_AC;
-busted.test_Q_component_2[25][26]:=0.1963563685387479*t*busted.test.theta_CG;
-busted.test_Q_component_2[25][27]:=0.1989860284705866*t*busted.test.theta_CT;
-busted.test_Q_component_2[25][29]:=0.2361684149931496*t*busted.test.theta_GT*busted.test.omega2;
-busted.test_Q_component_2[25][41]:=0.2567033972679326*t*busted.test.theta_CG*busted.test.omega2;
-busted.test_Q_component_2[25][54]:=0.257146542110382*t*busted.test.theta_CT*busted.test.omega2;
-busted.test_Q_component_2[26][10]:=0.3148753970510747*t*busted.test.theta_AC;
-busted.test_Q_component_2[26][18]:=0.4256503784977386*t*busted.test.theta_AG*busted.test.omega2;
-busted.test_Q_component_2[26][22]:=0.1818409092376876*t*busted.test.theta_CG*busted.test.omega2;
-busted.test_Q_component_2[26][24]:=0.5074830879161225*t*busted.test.theta_AG;
-busted.test_Q_component_2[26][25]:=0.09717451507454297*t*busted.test.theta_CG;
-busted.test_Q_component_2[26][27]:=0.1989860284705866*t*busted.test.theta_GT;
-busted.test_Q_component_2[26][30]:=0.2361684149931496*t*busted.test.theta_GT*busted.test.omega2;
-busted.test_Q_component_2[26][42]:=0.2567033972679326*t*busted.test.theta_CG*busted.test.omega2;
-busted.test_Q_component_2[26][55]:=0.257146542110382*t*busted.test.theta_CT*busted.test.omega2;
-busted.test_Q_component_2[27][11]:=0.3148753970510747*t*busted.test.theta_AC*busted.test.omega2;
-busted.test_Q_component_2[27][19]:=0.4256503784977386*t*busted.test.theta_AG*busted.test.omega2;
-busted.test_Q_component_2[27][23]:=0.1818409092376876*t*busted.test.theta_CG*busted.test.omega2;
-busted.test_Q_component_2[27][24]:=0.5074830879161225*t*busted.test.theta_AT;
-busted.test_Q_component_2[27][25]:=0.09717451507454297*t*busted.test.theta_CT;
-busted.test_Q_component_2[27][26]:=0.1963563685387479*t*busted.test.theta_GT;
-busted.test_Q_component_2[27][31]:=0.2361684149931496*t*busted.test.theta_GT*busted.test.omega2;
-busted.test_Q_component_2[27][43]:=0.2567033972679326*t*busted.test.theta_CG*busted.test.omega2;
-busted.test_Q_component_2[27][56]:=0.257146542110382*t*busted.test.theta_CT*busted.test.omega2;
-busted.test_Q_component_2[28][12]:=0.3148753970510747*t*busted.test.theta_AC*busted.test.omega2;
-busted.test_Q_component_2[28][16]:=0.4256503784977386*t*busted.test.theta_AT*busted.test.omega2;
-busted.test_Q_component_2[28][20]:=0.1818409092376876*t*busted.test.theta_CT*busted.test.omega2;
-busted.test_Q_component_2[28][24]:=0.1563402972714242*t*busted.test.theta_GT*busted.test.omega2;
-busted.test_Q_component_2[28][29]:=0.09717451507454297*t*busted.test.theta_AC;
-busted.test_Q_component_2[28][30]:=0.1963563685387479*t*busted.test.theta_AG;
-busted.test_Q_component_2[28][31]:=0.1989860284705866*t*busted.test.theta_AT;
-busted.test_Q_component_2[28][44]:=0.2567033972679326*t*busted.test.theta_CG*busted.test.omega2;
-busted.test_Q_component_2[28][57]:=0.257146542110382*t*busted.test.theta_CT;
-busted.test_Q_component_2[29][13]:=0.3148753970510747*t*busted.test.theta_AC*busted.test.omega2;
-busted.test_Q_component_2[29][17]:=0.4256503784977386*t*busted.test.theta_AT*busted.test.omega2;
-busted.test_Q_component_2[29][21]:=0.1818409092376876*t*busted.test.theta_CT*busted.test.omega2;
-busted.test_Q_component_2[29][25]:=0.1563402972714242*t*busted.test.theta_GT*busted.test.omega2;
-busted.test_Q_component_2[29][28]:=0.5074830879161225*t*busted.test.theta_AC;
-busted.test_Q_component_2[29][30]:=0.1963563685387479*t*busted.test.theta_CG;
-busted.test_Q_component_2[29][31]:=0.1989860284705866*t*busted.test.theta_CT;
-busted.test_Q_component_2[29][45]:=0.2567033972679326*t*busted.test.theta_CG*busted.test.omega2;
-busted.test_Q_component_2[29][58]:=0.257146542110382*t*busted.test.theta_CT*busted.test.omega2;
-busted.test_Q_component_2[30][14]:=0.3148753970510747*t*busted.test.theta_AC*busted.test.omega2;
-busted.test_Q_component_2[30][18]:=0.4256503784977386*t*busted.test.theta_AT*busted.test.omega2;
-busted.test_Q_component_2[30][22]:=0.1818409092376876*t*busted.test.theta_CT*busted.test.omega2;
-busted.test_Q_component_2[30][26]:=0.1563402972714242*t*busted.test.theta_GT*busted.test.omega2;
-busted.test_Q_component_2[30][28]:=0.5074830879161225*t*busted.test.theta_AG;
-busted.test_Q_component_2[30][29]:=0.09717451507454297*t*busted.test.theta_CG;
-busted.test_Q_component_2[30][31]:=0.1989860284705866*t*busted.test.theta_GT;
-busted.test_Q_component_2[30][46]:=0.2567033972679326*t*busted.test.theta_CG*busted.test.omega2;
-busted.test_Q_component_2[30][59]:=0.257146542110382*t*busted.test.theta_CT;
-busted.test_Q_component_2[31][15]:=0.3148753970510747*t*busted.test.theta_AC*busted.test.omega2;
-busted.test_Q_component_2[31][19]:=0.4256503784977386*t*busted.test.theta_AT*busted.test.omega2;
-busted.test_Q_component_2[31][23]:=0.1818409092376876*t*busted.test.theta_CT*busted.test.omega2;
-busted.test_Q_component_2[31][27]:=0.1563402972714242*t*busted.test.theta_GT*busted.test.omega2;
-busted.test_Q_component_2[31][28]:=0.5074830879161225*t*busted.test.theta_AT;
-busted.test_Q_component_2[31][29]:=0.09717451507454297*t*busted.test.theta_CT;
-busted.test_Q_component_2[31][30]:=0.1963563685387479*t*busted.test.theta_GT;
-busted.test_Q_component_2[31][47]:=0.2567033972679326*t*busted.test.theta_CG*busted.test.omega2;
-busted.test_Q_component_2[31][60]:=0.257146542110382*t*busted.test.theta_CT*busted.test.omega2;
-busted.test_Q_component_2[32][0]:=0.3148753970510747*t*busted.test.theta_AG*busted.test.omega2;
-busted.test_Q_component_2[32][16]:=0.1712746635706107*t*busted.test.theta_CG*busted.test.omega2;
-busted.test_Q_component_2[32][33]:=0.09717451507454297*t*busted.test.theta_AC*busted.test.omega2;
-busted.test_Q_component_2[32][34]:=0.1963563685387479*t*busted.test.theta_AG;
-busted.test_Q_component_2[32][35]:=0.1989860284705866*t*busted.test.theta_AT*busted.test.omega2;
-busted.test_Q_component_2[32][36]:=0.1818409092376876*t*busted.test.theta_AC*busted.test.omega2;
-busted.test_Q_component_2[32][40]:=0.1563402972714242*t*busted.test.theta_AG*busted.test.omega2;
-busted.test_Q_component_2[32][44]:=0.2361684149931496*t*busted.test.theta_AT*busted.test.omega2;
-busted.test_Q_component_2[33][1]:=0.3148753970510747*t*busted.test.theta_AG*busted.test.omega2;
-busted.test_Q_component_2[33][17]:=0.1712746635706107*t*busted.test.theta_CG*busted.test.omega2;
-busted.test_Q_component_2[33][32]:=0.5074830879161225*t*busted.test.theta_AC*busted.test.omega2;
-busted.test_Q_component_2[33][34]:=0.1963563685387479*t*busted.test.theta_CG*busted.test.omega2;
-busted.test_Q_component_2[33][35]:=0.1989860284705866*t*busted.test.theta_CT;
-busted.test_Q_component_2[33][37]:=0.1818409092376876*t*busted.test.theta_AC*busted.test.omega2;
-busted.test_Q_component_2[33][41]:=0.1563402972714242*t*busted.test.theta_AG*busted.test.omega2;
-busted.test_Q_component_2[33][45]:=0.2361684149931496*t*busted.test.theta_AT*busted.test.omega2;
-busted.test_Q_component_2[33][48]:=0.257146542110382*t*busted.test.theta_GT*busted.test.omega2;
-busted.test_Q_component_2[34][2]:=0.3148753970510747*t*busted.test.theta_AG*busted.test.omega2;
-busted.test_Q_component_2[34][18]:=0.1712746635706107*t*busted.test.theta_CG*busted.test.omega2;
-busted.test_Q_component_2[34][32]:=0.5074830879161225*t*busted.test.theta_AG;
-busted.test_Q_component_2[34][33]:=0.09717451507454297*t*busted.test.theta_CG*busted.test.omega2;
-busted.test_Q_component_2[34][35]:=0.1989860284705866*t*busted.test.theta_GT*busted.test.omega2;
-busted.test_Q_component_2[34][38]:=0.1818409092376876*t*busted.test.theta_AC*busted.test.omega2;
-busted.test_Q_component_2[34][42]:=0.1563402972714242*t*busted.test.theta_AG*busted.test.omega2;
-busted.test_Q_component_2[34][46]:=0.2361684149931496*t*busted.test.theta_AT*busted.test.omega2;
-busted.test_Q_component_2[35][3]:=0.3148753970510747*t*busted.test.theta_AG*busted.test.omega2;
-busted.test_Q_component_2[35][19]:=0.1712746635706107*t*busted.test.theta_CG*busted.test.omega2;
-busted.test_Q_component_2[35][32]:=0.5074830879161225*t*busted.test.theta_AT*busted.test.omega2;
-busted.test_Q_component_2[35][33]:=0.09717451507454297*t*busted.test.theta_CT;
-busted.test_Q_component_2[35][34]:=0.1963563685387479*t*busted.test.theta_GT*busted.test.omega2;
-busted.test_Q_component_2[35][39]:=0.1818409092376876*t*busted.test.theta_AC*busted.test.omega2;
-busted.test_Q_component_2[35][43]:=0.1563402972714242*t*busted.test.theta_AG*busted.test.omega2;
-busted.test_Q_component_2[35][47]:=0.2361684149931496*t*busted.test.theta_AT*busted.test.omega2;
-busted.test_Q_component_2[35][49]:=0.257146542110382*t*busted.test.theta_GT*busted.test.omega2;
-busted.test_Q_component_2[36][4]:=0.3148753970510747*t*busted.test.theta_AG*busted.test.omega2;
-busted.test_Q_component_2[36][20]:=0.1712746635706107*t*busted.test.theta_CG*busted.test.omega2;
-busted.test_Q_component_2[36][32]:=0.4256503784977386*t*busted.test.theta_AC*busted.test.omega2;
-busted.test_Q_component_2[36][37]:=0.09717451507454297*t*busted.test.theta_AC;
-busted.test_Q_component_2[36][38]:=0.1963563685387479*t*busted.test.theta_AG;
-busted.test_Q_component_2[36][39]:=0.1989860284705866*t*busted.test.theta_AT;
-busted.test_Q_component_2[36][40]:=0.1563402972714242*t*busted.test.theta_CG*busted.test.omega2;
-busted.test_Q_component_2[36][44]:=0.2361684149931496*t*busted.test.theta_CT*busted.test.omega2;
-busted.test_Q_component_2[36][50]:=0.257146542110382*t*busted.test.theta_GT*busted.test.omega2;
-busted.test_Q_component_2[37][5]:=0.3148753970510747*t*busted.test.theta_AG*busted.test.omega2;
-busted.test_Q_component_2[37][21]:=0.1712746635706107*t*busted.test.theta_CG*busted.test.omega2;
-busted.test_Q_component_2[37][33]:=0.4256503784977386*t*busted.test.theta_AC*busted.test.omega2;
-busted.test_Q_component_2[37][36]:=0.5074830879161225*t*busted.test.theta_AC;
-busted.test_Q_component_2[37][38]:=0.1963563685387479*t*busted.test.theta_CG;
-busted.test_Q_component_2[37][39]:=0.1989860284705866*t*busted.test.theta_CT;
-busted.test_Q_component_2[37][41]:=0.1563402972714242*t*busted.test.theta_CG*busted.test.omega2;
-busted.test_Q_component_2[37][45]:=0.2361684149931496*t*busted.test.theta_CT*busted.test.omega2;
-busted.test_Q_component_2[37][51]:=0.257146542110382*t*busted.test.theta_GT*busted.test.omega2;
-busted.test_Q_component_2[38][6]:=0.3148753970510747*t*busted.test.theta_AG*busted.test.omega2;
-busted.test_Q_component_2[38][22]:=0.1712746635706107*t*busted.test.theta_CG*busted.test.omega2;
-busted.test_Q_component_2[38][34]:=0.4256503784977386*t*busted.test.theta_AC*busted.test.omega2;
-busted.test_Q_component_2[38][36]:=0.5074830879161225*t*busted.test.theta_AG;
-busted.test_Q_component_2[38][37]:=0.09717451507454297*t*busted.test.theta_CG;
-busted.test_Q_component_2[38][39]:=0.1989860284705866*t*busted.test.theta_GT;
-busted.test_Q_component_2[38][42]:=0.1563402972714242*t*busted.test.theta_CG*busted.test.omega2;
-busted.test_Q_component_2[38][46]:=0.2361684149931496*t*busted.test.theta_CT*busted.test.omega2;
-busted.test_Q_component_2[38][52]:=0.257146542110382*t*busted.test.theta_GT*busted.test.omega2;
-busted.test_Q_component_2[39][7]:=0.3148753970510747*t*busted.test.theta_AG*busted.test.omega2;
-busted.test_Q_component_2[39][23]:=0.1712746635706107*t*busted.test.theta_CG*busted.test.omega2;
-busted.test_Q_component_2[39][35]:=0.4256503784977386*t*busted.test.theta_AC*busted.test.omega2;
-busted.test_Q_component_2[39][36]:=0.5074830879161225*t*busted.test.theta_AT;
-busted.test_Q_component_2[39][37]:=0.09717451507454297*t*busted.test.theta_CT;
-busted.test_Q_component_2[39][38]:=0.1963563685387479*t*busted.test.theta_GT;
-busted.test_Q_component_2[39][43]:=0.1563402972714242*t*busted.test.theta_CG*busted.test.omega2;
-busted.test_Q_component_2[39][47]:=0.2361684149931496*t*busted.test.theta_CT*busted.test.omega2;
-busted.test_Q_component_2[39][53]:=0.257146542110382*t*busted.test.theta_GT*busted.test.omega2;
-busted.test_Q_component_2[40][8]:=0.3148753970510747*t*busted.test.theta_AG*busted.test.omega2;
-busted.test_Q_component_2[40][24]:=0.1712746635706107*t*busted.test.theta_CG*busted.test.omega2;
-busted.test_Q_component_2[40][32]:=0.4256503784977386*t*busted.test.theta_AG*busted.test.omega2;
-busted.test_Q_component_2[40][36]:=0.1818409092376876*t*busted.test.theta_CG*busted.test.omega2;
-busted.test_Q_component_2[40][41]:=0.09717451507454297*t*busted.test.theta_AC;
-busted.test_Q_component_2[40][42]:=0.1963563685387479*t*busted.test.theta_AG;
-busted.test_Q_component_2[40][43]:=0.1989860284705866*t*busted.test.theta_AT;
-busted.test_Q_component_2[40][44]:=0.2361684149931496*t*busted.test.theta_GT*busted.test.omega2;
-busted.test_Q_component_2[41][9]:=0.3148753970510747*t*busted.test.theta_AG*busted.test.omega2;
-busted.test_Q_component_2[41][25]:=0.1712746635706107*t*busted.test.theta_CG*busted.test.omega2;
-busted.test_Q_component_2[41][33]:=0.4256503784977386*t*busted.test.theta_AG*busted.test.omega2;
-busted.test_Q_component_2[41][37]:=0.1818409092376876*t*busted.test.theta_CG*busted.test.omega2;
-busted.test_Q_component_2[41][40]:=0.5074830879161225*t*busted.test.theta_AC;
-busted.test_Q_component_2[41][42]:=0.1963563685387479*t*busted.test.theta_CG;
-busted.test_Q_component_2[41][43]:=0.1989860284705866*t*busted.test.theta_CT;
-busted.test_Q_component_2[41][45]:=0.2361684149931496*t*busted.test.theta_GT*busted.test.omega2;
-busted.test_Q_component_2[41][54]:=0.257146542110382*t*busted.test.theta_GT*busted.test.omega2;
-busted.test_Q_component_2[42][10]:=0.3148753970510747*t*busted.test.theta_AG*busted.test.omega2;
-busted.test_Q_component_2[42][26]:=0.1712746635706107*t*busted.test.theta_CG*busted.test.omega2;
-busted.test_Q_component_2[42][34]:=0.4256503784977386*t*busted.test.theta_AG*busted.test.omega2;
-busted.test_Q_component_2[42][38]:=0.1818409092376876*t*busted.test.theta_CG*busted.test.omega2;
-busted.test_Q_component_2[42][40]:=0.5074830879161225*t*busted.test.theta_AG;
-busted.test_Q_component_2[42][41]:=0.09717451507454297*t*busted.test.theta_CG;
-busted.test_Q_component_2[42][43]:=0.1989860284705866*t*busted.test.theta_GT;
-busted.test_Q_component_2[42][46]:=0.2361684149931496*t*busted.test.theta_GT*busted.test.omega2;
-busted.test_Q_component_2[42][55]:=0.257146542110382*t*busted.test.theta_GT*busted.test.omega2;
-busted.test_Q_component_2[43][11]:=0.3148753970510747*t*busted.test.theta_AG*busted.test.omega2;
-busted.test_Q_component_2[43][27]:=0.1712746635706107*t*busted.test.theta_CG*busted.test.omega2;
-busted.test_Q_component_2[43][35]:=0.4256503784977386*t*busted.test.theta_AG*busted.test.omega2;
-busted.test_Q_component_2[43][39]:=0.1818409092376876*t*busted.test.theta_CG*busted.test.omega2;
-busted.test_Q_component_2[43][40]:=0.5074830879161225*t*busted.test.theta_AT;
-busted.test_Q_component_2[43][41]:=0.09717451507454297*t*busted.test.theta_CT;
-busted.test_Q_component_2[43][42]:=0.1963563685387479*t*busted.test.theta_GT;
-busted.test_Q_component_2[43][47]:=0.2361684149931496*t*busted.test.theta_GT*busted.test.omega2;
-busted.test_Q_component_2[43][56]:=0.257146542110382*t*busted.test.theta_GT*busted.test.omega2;
-busted.test_Q_component_2[44][12]:=0.3148753970510747*t*busted.test.theta_AG*busted.test.omega2;
-busted.test_Q_component_2[44][28]:=0.1712746635706107*t*busted.test.theta_CG*busted.test.omega2;
-busted.test_Q_component_2[44][32]:=0.4256503784977386*t*busted.test.theta_AT*busted.test.omega2;
-busted.test_Q_component_2[44][36]:=0.1818409092376876*t*busted.test.theta_CT*busted.test.omega2;
-busted.test_Q_component_2[44][40]:=0.1563402972714242*t*busted.test.theta_GT*busted.test.omega2;
-busted.test_Q_component_2[44][45]:=0.09717451507454297*t*busted.test.theta_AC;
-busted.test_Q_component_2[44][46]:=0.1963563685387479*t*busted.test.theta_AG;
-busted.test_Q_component_2[44][47]:=0.1989860284705866*t*busted.test.theta_AT;
-busted.test_Q_component_2[44][57]:=0.257146542110382*t*busted.test.theta_GT*busted.test.omega2;
-busted.test_Q_component_2[45][13]:=0.3148753970510747*t*busted.test.theta_AG*busted.test.omega2;
-busted.test_Q_component_2[45][29]:=0.1712746635706107*t*busted.test.theta_CG*busted.test.omega2;
-busted.test_Q_component_2[45][33]:=0.4256503784977386*t*busted.test.theta_AT*busted.test.omega2;
-busted.test_Q_component_2[45][37]:=0.1818409092376876*t*busted.test.theta_CT*busted.test.omega2;
-busted.test_Q_component_2[45][41]:=0.1563402972714242*t*busted.test.theta_GT*busted.test.omega2;
-busted.test_Q_component_2[45][44]:=0.5074830879161225*t*busted.test.theta_AC;
-busted.test_Q_component_2[45][46]:=0.1963563685387479*t*busted.test.theta_CG;
-busted.test_Q_component_2[45][47]:=0.1989860284705866*t*busted.test.theta_CT;
-busted.test_Q_component_2[45][58]:=0.257146542110382*t*busted.test.theta_GT*busted.test.omega2;
-busted.test_Q_component_2[46][14]:=0.3148753970510747*t*busted.test.theta_AG*busted.test.omega2;
-busted.test_Q_component_2[46][30]:=0.1712746635706107*t*busted.test.theta_CG*busted.test.omega2;
-busted.test_Q_component_2[46][34]:=0.4256503784977386*t*busted.test.theta_AT*busted.test.omega2;
-busted.test_Q_component_2[46][38]:=0.1818409092376876*t*busted.test.theta_CT*busted.test.omega2;
-busted.test_Q_component_2[46][42]:=0.1563402972714242*t*busted.test.theta_GT*busted.test.omega2;
-busted.test_Q_component_2[46][44]:=0.5074830879161225*t*busted.test.theta_AG;
-busted.test_Q_component_2[46][45]:=0.09717451507454297*t*busted.test.theta_CG;
-busted.test_Q_component_2[46][47]:=0.1989860284705866*t*busted.test.theta_GT;
-busted.test_Q_component_2[46][59]:=0.257146542110382*t*busted.test.theta_GT*busted.test.omega2;
-busted.test_Q_component_2[47][15]:=0.3148753970510747*t*busted.test.theta_AG*busted.test.omega2;
-busted.test_Q_component_2[47][31]:=0.1712746635706107*t*busted.test.theta_CG*busted.test.omega2;
-busted.test_Q_component_2[47][35]:=0.4256503784977386*t*busted.test.theta_AT*busted.test.omega2;
-busted.test_Q_component_2[47][39]:=0.1818409092376876*t*busted.test.theta_CT*busted.test.omega2;
-busted.test_Q_component_2[47][43]:=0.1563402972714242*t*busted.test.theta_GT*busted.test.omega2;
-busted.test_Q_component_2[47][44]:=0.5074830879161225*t*busted.test.theta_AT;
-busted.test_Q_component_2[47][45]:=0.09717451507454297*t*busted.test.theta_CT;
-busted.test_Q_component_2[47][46]:=0.1963563685387479*t*busted.test.theta_GT;
-busted.test_Q_component_2[47][60]:=0.257146542110382*t*busted.test.theta_GT*busted.test.omega2;
-busted.test_Q_component_2[48][1]:=0.3148753970510747*t*busted.test.theta_AT*busted.test.omega2;
-busted.test_Q_component_2[48][17]:=0.1712746635706107*t*busted.test.theta_CT*busted.test.omega2;
-busted.test_Q_component_2[48][33]:=0.2567033972679326*t*busted.test.theta_GT*busted.test.omega2;
-busted.test_Q_component_2[48][49]:=0.1989860284705866*t*busted.test.theta_CT;
-busted.test_Q_component_2[48][51]:=0.1818409092376876*t*busted.test.theta_AC*busted.test.omega2;
-busted.test_Q_component_2[48][54]:=0.1563402972714242*t*busted.test.theta_AG*busted.test.omega2;
-busted.test_Q_component_2[48][58]:=0.2361684149931496*t*busted.test.theta_AT*busted.test.omega2;
-busted.test_Q_component_2[49][3]:=0.3148753970510747*t*busted.test.theta_AT*busted.test.omega2;
-busted.test_Q_component_2[49][19]:=0.1712746635706107*t*busted.test.theta_CT*busted.test.omega2;
-busted.test_Q_component_2[49][35]:=0.2567033972679326*t*busted.test.theta_GT*busted.test.omega2;
-busted.test_Q_component_2[49][48]:=0.09717451507454297*t*busted.test.theta_CT;
-busted.test_Q_component_2[49][53]:=0.1818409092376876*t*busted.test.theta_AC*busted.test.omega2;
-busted.test_Q_component_2[49][56]:=0.1563402972714242*t*busted.test.theta_AG*busted.test.omega2;
-busted.test_Q_component_2[49][60]:=0.2361684149931496*t*busted.test.theta_AT*busted.test.omega2;
-busted.test_Q_component_2[50][4]:=0.3148753970510747*t*busted.test.theta_AT*busted.test.omega2;
-busted.test_Q_component_2[50][20]:=0.1712746635706107*t*busted.test.theta_CT*busted.test.omega2;
-busted.test_Q_component_2[50][36]:=0.2567033972679326*t*busted.test.theta_GT*busted.test.omega2;
-busted.test_Q_component_2[50][51]:=0.09717451507454297*t*busted.test.theta_AC;
-busted.test_Q_component_2[50][52]:=0.1963563685387479*t*busted.test.theta_AG;
-busted.test_Q_component_2[50][53]:=0.1989860284705866*t*busted.test.theta_AT;
-busted.test_Q_component_2[50][57]:=0.2361684149931496*t*busted.test.theta_CT*busted.test.omega2;
-busted.test_Q_component_2[51][5]:=0.3148753970510747*t*busted.test.theta_AT*busted.test.omega2;
-busted.test_Q_component_2[51][21]:=0.1712746635706107*t*busted.test.theta_CT*busted.test.omega2;
-busted.test_Q_component_2[51][37]:=0.2567033972679326*t*busted.test.theta_GT*busted.test.omega2;
-busted.test_Q_component_2[51][48]:=0.4256503784977386*t*busted.test.theta_AC*busted.test.omega2;
-busted.test_Q_component_2[51][50]:=0.5074830879161225*t*busted.test.theta_AC;
-busted.test_Q_component_2[51][52]:=0.1963563685387479*t*busted.test.theta_CG;
-busted.test_Q_component_2[51][53]:=0.1989860284705866*t*busted.test.theta_CT;
-busted.test_Q_component_2[51][54]:=0.1563402972714242*t*busted.test.theta_CG*busted.test.omega2;
-busted.test_Q_component_2[51][58]:=0.2361684149931496*t*busted.test.theta_CT*busted.test.omega2;
-busted.test_Q_component_2[52][6]:=0.3148753970510747*t*busted.test.theta_AT*busted.test.omega2;
-busted.test_Q_component_2[52][22]:=0.1712746635706107*t*busted.test.theta_CT*busted.test.omega2;
-busted.test_Q_component_2[52][38]:=0.2567033972679326*t*busted.test.theta_GT*busted.test.omega2;
-busted.test_Q_component_2[52][50]:=0.5074830879161225*t*busted.test.theta_AG;
-busted.test_Q_component_2[52][51]:=0.09717451507454297*t*busted.test.theta_CG;
-busted.test_Q_component_2[52][53]:=0.1989860284705866*t*busted.test.theta_GT;
-busted.test_Q_component_2[52][55]:=0.1563402972714242*t*busted.test.theta_CG*busted.test.omega2;
-busted.test_Q_component_2[52][59]:=0.2361684149931496*t*busted.test.theta_CT*busted.test.omega2;
-busted.test_Q_component_2[53][7]:=0.3148753970510747*t*busted.test.theta_AT*busted.test.omega2;
-busted.test_Q_component_2[53][23]:=0.1712746635706107*t*busted.test.theta_CT*busted.test.omega2;
-busted.test_Q_component_2[53][39]:=0.2567033972679326*t*busted.test.theta_GT*busted.test.omega2;
-busted.test_Q_component_2[53][49]:=0.4256503784977386*t*busted.test.theta_AC*busted.test.omega2;
-busted.test_Q_component_2[53][50]:=0.5074830879161225*t*busted.test.theta_AT;
-busted.test_Q_component_2[53][51]:=0.09717451507454297*t*busted.test.theta_CT;
-busted.test_Q_component_2[53][52]:=0.1963563685387479*t*busted.test.theta_GT;
-busted.test_Q_component_2[53][56]:=0.1563402972714242*t*busted.test.theta_CG*busted.test.omega2;
-busted.test_Q_component_2[53][60]:=0.2361684149931496*t*busted.test.theta_CT*busted.test.omega2;
-busted.test_Q_component_2[54][9]:=0.3148753970510747*t*busted.test.theta_AT*busted.test.omega2;
-busted.test_Q_component_2[54][25]:=0.1712746635706107*t*busted.test.theta_CT*busted.test.omega2;
-busted.test_Q_component_2[54][41]:=0.2567033972679326*t*busted.test.theta_GT*busted.test.omega2;
-busted.test_Q_component_2[54][48]:=0.4256503784977386*t*busted.test.theta_AG*busted.test.omega2;
-busted.test_Q_component_2[54][51]:=0.1818409092376876*t*busted.test.theta_CG*busted.test.omega2;
-busted.test_Q_component_2[54][55]:=0.1963563685387479*t*busted.test.theta_CG*busted.test.omega2;
-busted.test_Q_component_2[54][56]:=0.1989860284705866*t*busted.test.theta_CT;
-busted.test_Q_component_2[54][58]:=0.2361684149931496*t*busted.test.theta_GT*busted.test.omega2;
-busted.test_Q_component_2[55][10]:=0.3148753970510747*t*busted.test.theta_AT*busted.test.omega2;
-busted.test_Q_component_2[55][26]:=0.1712746635706107*t*busted.test.theta_CT*busted.test.omega2;
-busted.test_Q_component_2[55][42]:=0.2567033972679326*t*busted.test.theta_GT*busted.test.omega2;
-busted.test_Q_component_2[55][52]:=0.1818409092376876*t*busted.test.theta_CG*busted.test.omega2;
-busted.test_Q_component_2[55][54]:=0.09717451507454297*t*busted.test.theta_CG*busted.test.omega2;
-busted.test_Q_component_2[55][56]:=0.1989860284705866*t*busted.test.theta_GT*busted.test.omega2;
-busted.test_Q_component_2[55][59]:=0.2361684149931496*t*busted.test.theta_GT*busted.test.omega2;
-busted.test_Q_component_2[56][11]:=0.3148753970510747*t*busted.test.theta_AT*busted.test.omega2;
-busted.test_Q_component_2[56][27]:=0.1712746635706107*t*busted.test.theta_CT*busted.test.omega2;
-busted.test_Q_component_2[56][43]:=0.2567033972679326*t*busted.test.theta_GT*busted.test.omega2;
-busted.test_Q_component_2[56][49]:=0.4256503784977386*t*busted.test.theta_AG*busted.test.omega2;
-busted.test_Q_component_2[56][53]:=0.1818409092376876*t*busted.test.theta_CG*busted.test.omega2;
-busted.test_Q_component_2[56][54]:=0.09717451507454297*t*busted.test.theta_CT;
-busted.test_Q_component_2[56][55]:=0.1963563685387479*t*busted.test.theta_GT*busted.test.omega2;
-busted.test_Q_component_2[56][60]:=0.2361684149931496*t*busted.test.theta_GT*busted.test.omega2;
-busted.test_Q_component_2[57][12]:=0.3148753970510747*t*busted.test.theta_AT*busted.test.omega2;
-busted.test_Q_component_2[57][28]:=0.1712746635706107*t*busted.test.theta_CT;
-busted.test_Q_component_2[57][44]:=0.2567033972679326*t*busted.test.theta_GT*busted.test.omega2;
-busted.test_Q_component_2[57][50]:=0.1818409092376876*t*busted.test.theta_CT*busted.test.omega2;
-busted.test_Q_component_2[57][58]:=0.09717451507454297*t*busted.test.theta_AC*busted.test.omega2;
-busted.test_Q_component_2[57][59]:=0.1963563685387479*t*busted.test.theta_AG;
-busted.test_Q_component_2[57][60]:=0.1989860284705866*t*busted.test.theta_AT*busted.test.omega2;
-busted.test_Q_component_2[58][13]:=0.3148753970510747*t*busted.test.theta_AT*busted.test.omega2;
-busted.test_Q_component_2[58][29]:=0.1712746635706107*t*busted.test.theta_CT*busted.test.omega2;
-busted.test_Q_component_2[58][45]:=0.2567033972679326*t*busted.test.theta_GT*busted.test.omega2;
-busted.test_Q_component_2[58][48]:=0.4256503784977386*t*busted.test.theta_AT*busted.test.omega2;
-busted.test_Q_component_2[58][51]:=0.1818409092376876*t*busted.test.theta_CT*busted.test.omega2;
-busted.test_Q_component_2[58][54]:=0.1563402972714242*t*busted.test.theta_GT*busted.test.omega2;
-busted.test_Q_component_2[58][57]:=0.5074830879161225*t*busted.test.theta_AC*busted.test.omega2;
-busted.test_Q_component_2[58][59]:=0.1963563685387479*t*busted.test.theta_CG*busted.test.omega2;
-busted.test_Q_component_2[58][60]:=0.1989860284705866*t*busted.test.theta_CT;
-busted.test_Q_component_2[59][14]:=0.3148753970510747*t*busted.test.theta_AT*busted.test.omega2;
-busted.test_Q_component_2[59][30]:=0.1712746635706107*t*busted.test.theta_CT;
-busted.test_Q_component_2[59][46]:=0.2567033972679326*t*busted.test.theta_GT*busted.test.omega2;
-busted.test_Q_component_2[59][52]:=0.1818409092376876*t*busted.test.theta_CT*busted.test.omega2;
-busted.test_Q_component_2[59][55]:=0.1563402972714242*t*busted.test.theta_GT*busted.test.omega2;
-busted.test_Q_component_2[59][57]:=0.5074830879161225*t*busted.test.theta_AG;
-busted.test_Q_component_2[59][58]:=0.09717451507454297*t*busted.test.theta_CG*busted.test.omega2;
-busted.test_Q_component_2[59][60]:=0.1989860284705866*t*busted.test.theta_GT*busted.test.omega2;
-busted.test_Q_component_2[60][15]:=0.3148753970510747*t*busted.test.theta_AT*busted.test.omega2;
-busted.test_Q_component_2[60][31]:=0.1712746635706107*t*busted.test.theta_CT*busted.test.omega2;
-busted.test_Q_component_2[60][47]:=0.2567033972679326*t*busted.test.theta_GT*busted.test.omega2;
-busted.test_Q_component_2[60][49]:=0.4256503784977386*t*busted.test.theta_AT*busted.test.omega2;
-busted.test_Q_component_2[60][53]:=0.1818409092376876*t*busted.test.theta_CT*busted.test.omega2;
-busted.test_Q_component_2[60][56]:=0.1563402972714242*t*busted.test.theta_GT*busted.test.omega2;
-busted.test_Q_component_2[60][57]:=0.5074830879161225*t*busted.test.theta_AT*busted.test.omega2;
-busted.test_Q_component_2[60][58]:=0.09717451507454297*t*busted.test.theta_CT;
-busted.test_Q_component_2[60][59]:=0.1963563685387479*t*busted.test.theta_GT*busted.test.omega2;
-
-
-busted.test_Q_component_3={61,61};
-busted.test_Q_component_3[0][1]:=0.09717451507454297*t*busted.test.theta_AC*busted.test.omega3;
-busted.test_Q_component_3[0][2]:=0.1963563685387479*t*busted.test.theta_AG;
-busted.test_Q_component_3[0][3]:=0.1989860284705866*t*busted.test.theta_AT*busted.test.omega3;
-busted.test_Q_component_3[0][4]:=0.1818409092376876*t*busted.test.theta_AC*busted.test.omega3;
-busted.test_Q_component_3[0][8]:=0.1563402972714242*t*busted.test.theta_AG*busted.test.omega3;
-busted.test_Q_component_3[0][12]:=0.2361684149931496*t*busted.test.theta_AT*busted.test.omega3;
-busted.test_Q_component_3[0][16]:=0.1712746635706107*t*busted.test.theta_AC*busted.test.omega3;
-busted.test_Q_component_3[0][32]:=0.2567033972679326*t*busted.test.theta_AG*busted.test.omega3;
-busted.test_Q_component_3[1][0]:=0.5074830879161225*t*busted.test.theta_AC*busted.test.omega3;
-busted.test_Q_component_3[1][2]:=0.1963563685387479*t*busted.test.theta_CG*busted.test.omega3;
-busted.test_Q_component_3[1][3]:=0.1989860284705866*t*busted.test.theta_CT;
-busted.test_Q_component_3[1][5]:=0.1818409092376876*t*busted.test.theta_AC*busted.test.omega3;
-busted.test_Q_component_3[1][9]:=0.1563402972714242*t*busted.test.theta_AG*busted.test.omega3;
-busted.test_Q_component_3[1][13]:=0.2361684149931496*t*busted.test.theta_AT*busted.test.omega3;
-busted.test_Q_component_3[1][17]:=0.1712746635706107*t*busted.test.theta_AC*busted.test.omega3;
-busted.test_Q_component_3[1][33]:=0.2567033972679326*t*busted.test.theta_AG*busted.test.omega3;
-busted.test_Q_component_3[1][48]:=0.257146542110382*t*busted.test.theta_AT*busted.test.omega3;
-busted.test_Q_component_3[2][0]:=0.5074830879161225*t*busted.test.theta_AG;
-busted.test_Q_component_3[2][1]:=0.09717451507454297*t*busted.test.theta_CG*busted.test.omega3;
-busted.test_Q_component_3[2][3]:=0.1989860284705866*t*busted.test.theta_GT*busted.test.omega3;
-busted.test_Q_component_3[2][6]:=0.1818409092376876*t*busted.test.theta_AC*busted.test.omega3;
-busted.test_Q_component_3[2][10]:=0.1563402972714242*t*busted.test.theta_AG*busted.test.omega3;
-busted.test_Q_component_3[2][14]:=0.2361684149931496*t*busted.test.theta_AT*busted.test.omega3;
-busted.test_Q_component_3[2][18]:=0.1712746635706107*t*busted.test.theta_AC*busted.test.omega3;
-busted.test_Q_component_3[2][34]:=0.2567033972679326*t*busted.test.theta_AG*busted.test.omega3;
-busted.test_Q_component_3[3][0]:=0.5074830879161225*t*busted.test.theta_AT*busted.test.omega3;
-busted.test_Q_component_3[3][1]:=0.09717451507454297*t*busted.test.theta_CT;
-busted.test_Q_component_3[3][2]:=0.1963563685387479*t*busted.test.theta_GT*busted.test.omega3;
-busted.test_Q_component_3[3][7]:=0.1818409092376876*t*busted.test.theta_AC*busted.test.omega3;
-busted.test_Q_component_3[3][11]:=0.1563402972714242*t*busted.test.theta_AG*busted.test.omega3;
-busted.test_Q_component_3[3][15]:=0.2361684149931496*t*busted.test.theta_AT*busted.test.omega3;
-busted.test_Q_component_3[3][19]:=0.1712746635706107*t*busted.test.theta_AC*busted.test.omega3;
-busted.test_Q_component_3[3][35]:=0.2567033972679326*t*busted.test.theta_AG*busted.test.omega3;
-busted.test_Q_component_3[3][49]:=0.257146542110382*t*busted.test.theta_AT*busted.test.omega3;
-busted.test_Q_component_3[4][0]:=0.4256503784977386*t*busted.test.theta_AC*busted.test.omega3;
-busted.test_Q_component_3[4][5]:=0.09717451507454297*t*busted.test.theta_AC;
-busted.test_Q_component_3[4][6]:=0.1963563685387479*t*busted.test.theta_AG;
-busted.test_Q_component_3[4][7]:=0.1989860284705866*t*busted.test.theta_AT;
-busted.test_Q_component_3[4][8]:=0.1563402972714242*t*busted.test.theta_CG*busted.test.omega3;
-busted.test_Q_component_3[4][12]:=0.2361684149931496*t*busted.test.theta_CT*busted.test.omega3;
-busted.test_Q_component_3[4][20]:=0.1712746635706107*t*busted.test.theta_AC*busted.test.omega3;
-busted.test_Q_component_3[4][36]:=0.2567033972679326*t*busted.test.theta_AG*busted.test.omega3;
-busted.test_Q_component_3[4][50]:=0.257146542110382*t*busted.test.theta_AT*busted.test.omega3;
-busted.test_Q_component_3[5][1]:=0.4256503784977386*t*busted.test.theta_AC*busted.test.omega3;
-busted.test_Q_component_3[5][4]:=0.5074830879161225*t*busted.test.theta_AC;
-busted.test_Q_component_3[5][6]:=0.1963563685387479*t*busted.test.theta_CG;
-busted.test_Q_component_3[5][7]:=0.1989860284705866*t*busted.test.theta_CT;
-busted.test_Q_component_3[5][9]:=0.1563402972714242*t*busted.test.theta_CG*busted.test.omega3;
-busted.test_Q_component_3[5][13]:=0.2361684149931496*t*busted.test.theta_CT*busted.test.omega3;
-busted.test_Q_component_3[5][21]:=0.1712746635706107*t*busted.test.theta_AC*busted.test.omega3;
-busted.test_Q_component_3[5][37]:=0.2567033972679326*t*busted.test.theta_AG*busted.test.omega3;
-busted.test_Q_component_3[5][51]:=0.257146542110382*t*busted.test.theta_AT*busted.test.omega3;
-busted.test_Q_component_3[6][2]:=0.4256503784977386*t*busted.test.theta_AC*busted.test.omega3;
-busted.test_Q_component_3[6][4]:=0.5074830879161225*t*busted.test.theta_AG;
-busted.test_Q_component_3[6][5]:=0.09717451507454297*t*busted.test.theta_CG;
-busted.test_Q_component_3[6][7]:=0.1989860284705866*t*busted.test.theta_GT;
-busted.test_Q_component_3[6][10]:=0.1563402972714242*t*busted.test.theta_CG*busted.test.omega3;
-busted.test_Q_component_3[6][14]:=0.2361684149931496*t*busted.test.theta_CT*busted.test.omega3;
-busted.test_Q_component_3[6][22]:=0.1712746635706107*t*busted.test.theta_AC*busted.test.omega3;
-busted.test_Q_component_3[6][38]:=0.2567033972679326*t*busted.test.theta_AG*busted.test.omega3;
-busted.test_Q_component_3[6][52]:=0.257146542110382*t*busted.test.theta_AT*busted.test.omega3;
-busted.test_Q_component_3[7][3]:=0.4256503784977386*t*busted.test.theta_AC*busted.test.omega3;
-busted.test_Q_component_3[7][4]:=0.5074830879161225*t*busted.test.theta_AT;
-busted.test_Q_component_3[7][5]:=0.09717451507454297*t*busted.test.theta_CT;
-busted.test_Q_component_3[7][6]:=0.1963563685387479*t*busted.test.theta_GT;
-busted.test_Q_component_3[7][11]:=0.1563402972714242*t*busted.test.theta_CG*busted.test.omega3;
-busted.test_Q_component_3[7][15]:=0.2361684149931496*t*busted.test.theta_CT*busted.test.omega3;
-busted.test_Q_component_3[7][23]:=0.1712746635706107*t*busted.test.theta_AC*busted.test.omega3;
-busted.test_Q_component_3[7][39]:=0.2567033972679326*t*busted.test.theta_AG*busted.test.omega3;
-busted.test_Q_component_3[7][53]:=0.257146542110382*t*busted.test.theta_AT*busted.test.omega3;
-busted.test_Q_component_3[8][0]:=0.4256503784977386*t*busted.test.theta_AG*busted.test.omega3;
-busted.test_Q_component_3[8][4]:=0.1818409092376876*t*busted.test.theta_CG*busted.test.omega3;
-busted.test_Q_component_3[8][9]:=0.09717451507454297*t*busted.test.theta_AC*busted.test.omega3;
-busted.test_Q_component_3[8][10]:=0.1963563685387479*t*busted.test.theta_AG;
-busted.test_Q_component_3[8][11]:=0.1989860284705866*t*busted.test.theta_AT*busted.test.omega3;
-busted.test_Q_component_3[8][12]:=0.2361684149931496*t*busted.test.theta_GT*busted.test.omega3;
-busted.test_Q_component_3[8][24]:=0.1712746635706107*t*busted.test.theta_AC;
-busted.test_Q_component_3[8][40]:=0.2567033972679326*t*busted.test.theta_AG*busted.test.omega3;
-busted.test_Q_component_3[9][1]:=0.4256503784977386*t*busted.test.theta_AG*busted.test.omega3;
-busted.test_Q_component_3[9][5]:=0.1818409092376876*t*busted.test.theta_CG*busted.test.omega3;
-busted.test_Q_component_3[9][8]:=0.5074830879161225*t*busted.test.theta_AC*busted.test.omega3;
-busted.test_Q_component_3[9][10]:=0.1963563685387479*t*busted.test.theta_CG*busted.test.omega3;
-busted.test_Q_component_3[9][11]:=0.1989860284705866*t*busted.test.theta_CT;
-busted.test_Q_component_3[9][13]:=0.2361684149931496*t*busted.test.theta_GT*busted.test.omega3;
-busted.test_Q_component_3[9][25]:=0.1712746635706107*t*busted.test.theta_AC*busted.test.omega3;
-busted.test_Q_component_3[9][41]:=0.2567033972679326*t*busted.test.theta_AG*busted.test.omega3;
-busted.test_Q_component_3[9][54]:=0.257146542110382*t*busted.test.theta_AT*busted.test.omega3;
-busted.test_Q_component_3[10][2]:=0.4256503784977386*t*busted.test.theta_AG*busted.test.omega3;
-busted.test_Q_component_3[10][6]:=0.1818409092376876*t*busted.test.theta_CG*busted.test.omega3;
-busted.test_Q_component_3[10][8]:=0.5074830879161225*t*busted.test.theta_AG;
-busted.test_Q_component_3[10][9]:=0.09717451507454297*t*busted.test.theta_CG*busted.test.omega3;
-busted.test_Q_component_3[10][11]:=0.1989860284705866*t*busted.test.theta_GT*busted.test.omega3;
-busted.test_Q_component_3[10][14]:=0.2361684149931496*t*busted.test.theta_GT*busted.test.omega3;
-busted.test_Q_component_3[10][26]:=0.1712746635706107*t*busted.test.theta_AC;
-busted.test_Q_component_3[10][42]:=0.2567033972679326*t*busted.test.theta_AG*busted.test.omega3;
-busted.test_Q_component_3[10][55]:=0.257146542110382*t*busted.test.theta_AT*busted.test.omega3;
-busted.test_Q_component_3[11][3]:=0.4256503784977386*t*busted.test.theta_AG*busted.test.omega3;
-busted.test_Q_component_3[11][7]:=0.1818409092376876*t*busted.test.theta_CG*busted.test.omega3;
-busted.test_Q_component_3[11][8]:=0.5074830879161225*t*busted.test.theta_AT*busted.test.omega3;
-busted.test_Q_component_3[11][9]:=0.09717451507454297*t*busted.test.theta_CT;
-busted.test_Q_component_3[11][10]:=0.1963563685387479*t*busted.test.theta_GT*busted.test.omega3;
-busted.test_Q_component_3[11][15]:=0.2361684149931496*t*busted.test.theta_GT*busted.test.omega3;
-busted.test_Q_component_3[11][27]:=0.1712746635706107*t*busted.test.theta_AC*busted.test.omega3;
-busted.test_Q_component_3[11][43]:=0.2567033972679326*t*busted.test.theta_AG*busted.test.omega3;
-busted.test_Q_component_3[11][56]:=0.257146542110382*t*busted.test.theta_AT*busted.test.omega3;
-busted.test_Q_component_3[12][0]:=0.4256503784977386*t*busted.test.theta_AT*busted.test.omega3;
-busted.test_Q_component_3[12][4]:=0.1818409092376876*t*busted.test.theta_CT*busted.test.omega3;
-busted.test_Q_component_3[12][8]:=0.1563402972714242*t*busted.test.theta_GT*busted.test.omega3;
-busted.test_Q_component_3[12][13]:=0.09717451507454297*t*busted.test.theta_AC;
-busted.test_Q_component_3[12][14]:=0.1963563685387479*t*busted.test.theta_AG*busted.test.omega3;
-busted.test_Q_component_3[12][15]:=0.1989860284705866*t*busted.test.theta_AT;
-busted.test_Q_component_3[12][28]:=0.1712746635706107*t*busted.test.theta_AC*busted.test.omega3;
-busted.test_Q_component_3[12][44]:=0.2567033972679326*t*busted.test.theta_AG*busted.test.omega3;
-busted.test_Q_component_3[12][57]:=0.257146542110382*t*busted.test.theta_AT*busted.test.omega3;
-busted.test_Q_component_3[13][1]:=0.4256503784977386*t*busted.test.theta_AT*busted.test.omega3;
-busted.test_Q_component_3[13][5]:=0.1818409092376876*t*busted.test.theta_CT*busted.test.omega3;
-busted.test_Q_component_3[13][9]:=0.1563402972714242*t*busted.test.theta_GT*busted.test.omega3;
-busted.test_Q_component_3[13][12]:=0.5074830879161225*t*busted.test.theta_AC;
-busted.test_Q_component_3[13][14]:=0.1963563685387479*t*busted.test.theta_CG*busted.test.omega3;
-busted.test_Q_component_3[13][15]:=0.1989860284705866*t*busted.test.theta_CT;
-busted.test_Q_component_3[13][29]:=0.1712746635706107*t*busted.test.theta_AC*busted.test.omega3;
-busted.test_Q_component_3[13][45]:=0.2567033972679326*t*busted.test.theta_AG*busted.test.omega3;
-busted.test_Q_component_3[13][58]:=0.257146542110382*t*busted.test.theta_AT*busted.test.omega3;
-busted.test_Q_component_3[14][2]:=0.4256503784977386*t*busted.test.theta_AT*busted.test.omega3;
-busted.test_Q_component_3[14][6]:=0.1818409092376876*t*busted.test.theta_CT*busted.test.omega3;
-busted.test_Q_component_3[14][10]:=0.1563402972714242*t*busted.test.theta_GT*busted.test.omega3;
-busted.test_Q_component_3[14][12]:=0.5074830879161225*t*busted.test.theta_AG*busted.test.omega3;
-busted.test_Q_component_3[14][13]:=0.09717451507454297*t*busted.test.theta_CG*busted.test.omega3;
-busted.test_Q_component_3[14][15]:=0.1989860284705866*t*busted.test.theta_GT*busted.test.omega3;
-busted.test_Q_component_3[14][30]:=0.1712746635706107*t*busted.test.theta_AC*busted.test.omega3;
-busted.test_Q_component_3[14][46]:=0.2567033972679326*t*busted.test.theta_AG*busted.test.omega3;
-busted.test_Q_component_3[14][59]:=0.257146542110382*t*busted.test.theta_AT*busted.test.omega3;
-busted.test_Q_component_3[15][3]:=0.4256503784977386*t*busted.test.theta_AT*busted.test.omega3;
-busted.test_Q_component_3[15][7]:=0.1818409092376876*t*busted.test.theta_CT*busted.test.omega3;
-busted.test_Q_component_3[15][11]:=0.1563402972714242*t*busted.test.theta_GT*busted.test.omega3;
-busted.test_Q_component_3[15][12]:=0.5074830879161225*t*busted.test.theta_AT;
-busted.test_Q_component_3[15][13]:=0.09717451507454297*t*busted.test.theta_CT;
-busted.test_Q_component_3[15][14]:=0.1963563685387479*t*busted.test.theta_GT*busted.test.omega3;
-busted.test_Q_component_3[15][31]:=0.1712746635706107*t*busted.test.theta_AC*busted.test.omega3;
-busted.test_Q_component_3[15][47]:=0.2567033972679326*t*busted.test.theta_AG*busted.test.omega3;
-busted.test_Q_component_3[15][60]:=0.257146542110382*t*busted.test.theta_AT*busted.test.omega3;
-busted.test_Q_component_3[16][0]:=0.3148753970510747*t*busted.test.theta_AC*busted.test.omega3;
-busted.test_Q_component_3[16][17]:=0.09717451507454297*t*busted.test.theta_AC*busted.test.omega3;
-busted.test_Q_component_3[16][18]:=0.1963563685387479*t*busted.test.theta_AG;
-busted.test_Q_component_3[16][19]:=0.1989860284705866*t*busted.test.theta_AT*busted.test.omega3;
-busted.test_Q_component_3[16][20]:=0.1818409092376876*t*busted.test.theta_AC*busted.test.omega3;
-busted.test_Q_component_3[16][24]:=0.1563402972714242*t*busted.test.theta_AG*busted.test.omega3;
-busted.test_Q_component_3[16][28]:=0.2361684149931496*t*busted.test.theta_AT*busted.test.omega3;
-busted.test_Q_component_3[16][32]:=0.2567033972679326*t*busted.test.theta_CG*busted.test.omega3;
-busted.test_Q_component_3[17][1]:=0.3148753970510747*t*busted.test.theta_AC*busted.test.omega3;
-busted.test_Q_component_3[17][16]:=0.5074830879161225*t*busted.test.theta_AC*busted.test.omega3;
-busted.test_Q_component_3[17][18]:=0.1963563685387479*t*busted.test.theta_CG*busted.test.omega3;
-busted.test_Q_component_3[17][19]:=0.1989860284705866*t*busted.test.theta_CT;
-busted.test_Q_component_3[17][21]:=0.1818409092376876*t*busted.test.theta_AC*busted.test.omega3;
-busted.test_Q_component_3[17][25]:=0.1563402972714242*t*busted.test.theta_AG*busted.test.omega3;
-busted.test_Q_component_3[17][29]:=0.2361684149931496*t*busted.test.theta_AT*busted.test.omega3;
-busted.test_Q_component_3[17][33]:=0.2567033972679326*t*busted.test.theta_CG*busted.test.omega3;
-busted.test_Q_component_3[17][48]:=0.257146542110382*t*busted.test.theta_CT*busted.test.omega3;
-busted.test_Q_component_3[18][2]:=0.3148753970510747*t*busted.test.theta_AC*busted.test.omega3;
-busted.test_Q_component_3[18][16]:=0.5074830879161225*t*busted.test.theta_AG;
-busted.test_Q_component_3[18][17]:=0.09717451507454297*t*busted.test.theta_CG*busted.test.omega3;
-busted.test_Q_component_3[18][19]:=0.1989860284705866*t*busted.test.theta_GT*busted.test.omega3;
-busted.test_Q_component_3[18][22]:=0.1818409092376876*t*busted.test.theta_AC*busted.test.omega3;
-busted.test_Q_component_3[18][26]:=0.1563402972714242*t*busted.test.theta_AG*busted.test.omega3;
-busted.test_Q_component_3[18][30]:=0.2361684149931496*t*busted.test.theta_AT*busted.test.omega3;
-busted.test_Q_component_3[18][34]:=0.2567033972679326*t*busted.test.theta_CG*busted.test.omega3;
-busted.test_Q_component_3[19][3]:=0.3148753970510747*t*busted.test.theta_AC*busted.test.omega3;
-busted.test_Q_component_3[19][16]:=0.5074830879161225*t*busted.test.theta_AT*busted.test.omega3;
-busted.test_Q_component_3[19][17]:=0.09717451507454297*t*busted.test.theta_CT;
-busted.test_Q_component_3[19][18]:=0.1963563685387479*t*busted.test.theta_GT*busted.test.omega3;
-busted.test_Q_component_3[19][23]:=0.1818409092376876*t*busted.test.theta_AC*busted.test.omega3;
-busted.test_Q_component_3[19][27]:=0.1563402972714242*t*busted.test.theta_AG*busted.test.omega3;
-busted.test_Q_component_3[19][31]:=0.2361684149931496*t*busted.test.theta_AT*busted.test.omega3;
-busted.test_Q_component_3[19][35]:=0.2567033972679326*t*busted.test.theta_CG*busted.test.omega3;
-busted.test_Q_component_3[19][49]:=0.257146542110382*t*busted.test.theta_CT*busted.test.omega3;
-busted.test_Q_component_3[20][4]:=0.3148753970510747*t*busted.test.theta_AC*busted.test.omega3;
-busted.test_Q_component_3[20][16]:=0.4256503784977386*t*busted.test.theta_AC*busted.test.omega3;
-busted.test_Q_component_3[20][21]:=0.09717451507454297*t*busted.test.theta_AC;
-busted.test_Q_component_3[20][22]:=0.1963563685387479*t*busted.test.theta_AG;
-busted.test_Q_component_3[20][23]:=0.1989860284705866*t*busted.test.theta_AT;
-busted.test_Q_component_3[20][24]:=0.1563402972714242*t*busted.test.theta_CG*busted.test.omega3;
-busted.test_Q_component_3[20][28]:=0.2361684149931496*t*busted.test.theta_CT*busted.test.omega3;
-busted.test_Q_component_3[20][36]:=0.2567033972679326*t*busted.test.theta_CG*busted.test.omega3;
-busted.test_Q_component_3[20][50]:=0.257146542110382*t*busted.test.theta_CT*busted.test.omega3;
-busted.test_Q_component_3[21][5]:=0.3148753970510747*t*busted.test.theta_AC*busted.test.omega3;
-busted.test_Q_component_3[21][17]:=0.4256503784977386*t*busted.test.theta_AC*busted.test.omega3;
-busted.test_Q_component_3[21][20]:=0.5074830879161225*t*busted.test.theta_AC;
-busted.test_Q_component_3[21][22]:=0.1963563685387479*t*busted.test.theta_CG;
-busted.test_Q_component_3[21][23]:=0.1989860284705866*t*busted.test.theta_CT;
-busted.test_Q_component_3[21][25]:=0.1563402972714242*t*busted.test.theta_CG*busted.test.omega3;
-busted.test_Q_component_3[21][29]:=0.2361684149931496*t*busted.test.theta_CT*busted.test.omega3;
-busted.test_Q_component_3[21][37]:=0.2567033972679326*t*busted.test.theta_CG*busted.test.omega3;
-busted.test_Q_component_3[21][51]:=0.257146542110382*t*busted.test.theta_CT*busted.test.omega3;
-busted.test_Q_component_3[22][6]:=0.3148753970510747*t*busted.test.theta_AC*busted.test.omega3;
-busted.test_Q_component_3[22][18]:=0.4256503784977386*t*busted.test.theta_AC*busted.test.omega3;
-busted.test_Q_component_3[22][20]:=0.5074830879161225*t*busted.test.theta_AG;
-busted.test_Q_component_3[22][21]:=0.09717451507454297*t*busted.test.theta_CG;
-busted.test_Q_component_3[22][23]:=0.1989860284705866*t*busted.test.theta_GT;
-busted.test_Q_component_3[22][26]:=0.1563402972714242*t*busted.test.theta_CG*busted.test.omega3;
-busted.test_Q_component_3[22][30]:=0.2361684149931496*t*busted.test.theta_CT*busted.test.omega3;
-busted.test_Q_component_3[22][38]:=0.2567033972679326*t*busted.test.theta_CG*busted.test.omega3;
-busted.test_Q_component_3[22][52]:=0.257146542110382*t*busted.test.theta_CT*busted.test.omega3;
-busted.test_Q_component_3[23][7]:=0.3148753970510747*t*busted.test.theta_AC*busted.test.omega3;
-busted.test_Q_component_3[23][19]:=0.4256503784977386*t*busted.test.theta_AC*busted.test.omega3;
-busted.test_Q_component_3[23][20]:=0.5074830879161225*t*busted.test.theta_AT;
-busted.test_Q_component_3[23][21]:=0.09717451507454297*t*busted.test.theta_CT;
-busted.test_Q_component_3[23][22]:=0.1963563685387479*t*busted.test.theta_GT;
-busted.test_Q_component_3[23][27]:=0.1563402972714242*t*busted.test.theta_CG*busted.test.omega3;
-busted.test_Q_component_3[23][31]:=0.2361684149931496*t*busted.test.theta_CT*busted.test.omega3;
-busted.test_Q_component_3[23][39]:=0.2567033972679326*t*busted.test.theta_CG*busted.test.omega3;
-busted.test_Q_component_3[23][53]:=0.257146542110382*t*busted.test.theta_CT*busted.test.omega3;
-busted.test_Q_component_3[24][8]:=0.3148753970510747*t*busted.test.theta_AC;
-busted.test_Q_component_3[24][16]:=0.4256503784977386*t*busted.test.theta_AG*busted.test.omega3;
-busted.test_Q_component_3[24][20]:=0.1818409092376876*t*busted.test.theta_CG*busted.test.omega3;
-busted.test_Q_component_3[24][25]:=0.09717451507454297*t*busted.test.theta_AC;
-busted.test_Q_component_3[24][26]:=0.1963563685387479*t*busted.test.theta_AG;
-busted.test_Q_component_3[24][27]:=0.1989860284705866*t*busted.test.theta_AT;
-busted.test_Q_component_3[24][28]:=0.2361684149931496*t*busted.test.theta_GT*busted.test.omega3;
-busted.test_Q_component_3[24][40]:=0.2567033972679326*t*busted.test.theta_CG*busted.test.omega3;
-busted.test_Q_component_3[25][9]:=0.3148753970510747*t*busted.test.theta_AC*busted.test.omega3;
-busted.test_Q_component_3[25][17]:=0.4256503784977386*t*busted.test.theta_AG*busted.test.omega3;
-busted.test_Q_component_3[25][21]:=0.1818409092376876*t*busted.test.theta_CG*busted.test.omega3;
-busted.test_Q_component_3[25][24]:=0.5074830879161225*t*busted.test.theta_AC;
-busted.test_Q_component_3[25][26]:=0.1963563685387479*t*busted.test.theta_CG;
-busted.test_Q_component_3[25][27]:=0.1989860284705866*t*busted.test.theta_CT;
-busted.test_Q_component_3[25][29]:=0.2361684149931496*t*busted.test.theta_GT*busted.test.omega3;
-busted.test_Q_component_3[25][41]:=0.2567033972679326*t*busted.test.theta_CG*busted.test.omega3;
-busted.test_Q_component_3[25][54]:=0.257146542110382*t*busted.test.theta_CT*busted.test.omega3;
-busted.test_Q_component_3[26][10]:=0.3148753970510747*t*busted.test.theta_AC;
-busted.test_Q_component_3[26][18]:=0.4256503784977386*t*busted.test.theta_AG*busted.test.omega3;
-busted.test_Q_component_3[26][22]:=0.1818409092376876*t*busted.test.theta_CG*busted.test.omega3;
-busted.test_Q_component_3[26][24]:=0.5074830879161225*t*busted.test.theta_AG;
-busted.test_Q_component_3[26][25]:=0.09717451507454297*t*busted.test.theta_CG;
-busted.test_Q_component_3[26][27]:=0.1989860284705866*t*busted.test.theta_GT;
-busted.test_Q_component_3[26][30]:=0.2361684149931496*t*busted.test.theta_GT*busted.test.omega3;
-busted.test_Q_component_3[26][42]:=0.2567033972679326*t*busted.test.theta_CG*busted.test.omega3;
-busted.test_Q_component_3[26][55]:=0.257146542110382*t*busted.test.theta_CT*busted.test.omega3;
-busted.test_Q_component_3[27][11]:=0.3148753970510747*t*busted.test.theta_AC*busted.test.omega3;
-busted.test_Q_component_3[27][19]:=0.4256503784977386*t*busted.test.theta_AG*busted.test.omega3;
-busted.test_Q_component_3[27][23]:=0.1818409092376876*t*busted.test.theta_CG*busted.test.omega3;
-busted.test_Q_component_3[27][24]:=0.5074830879161225*t*busted.test.theta_AT;
-busted.test_Q_component_3[27][25]:=0.09717451507454297*t*busted.test.theta_CT;
-busted.test_Q_component_3[27][26]:=0.1963563685387479*t*busted.test.theta_GT;
-busted.test_Q_component_3[27][31]:=0.2361684149931496*t*busted.test.theta_GT*busted.test.omega3;
-busted.test_Q_component_3[27][43]:=0.2567033972679326*t*busted.test.theta_CG*busted.test.omega3;
-busted.test_Q_component_3[27][56]:=0.257146542110382*t*busted.test.theta_CT*busted.test.omega3;
-busted.test_Q_component_3[28][12]:=0.3148753970510747*t*busted.test.theta_AC*busted.test.omega3;
-busted.test_Q_component_3[28][16]:=0.4256503784977386*t*busted.test.theta_AT*busted.test.omega3;
-busted.test_Q_component_3[28][20]:=0.1818409092376876*t*busted.test.theta_CT*busted.test.omega3;
-busted.test_Q_component_3[28][24]:=0.1563402972714242*t*busted.test.theta_GT*busted.test.omega3;
-busted.test_Q_component_3[28][29]:=0.09717451507454297*t*busted.test.theta_AC;
-busted.test_Q_component_3[28][30]:=0.1963563685387479*t*busted.test.theta_AG;
-busted.test_Q_component_3[28][31]:=0.1989860284705866*t*busted.test.theta_AT;
-busted.test_Q_component_3[28][44]:=0.2567033972679326*t*busted.test.theta_CG*busted.test.omega3;
-busted.test_Q_component_3[28][57]:=0.257146542110382*t*busted.test.theta_CT;
-busted.test_Q_component_3[29][13]:=0.3148753970510747*t*busted.test.theta_AC*busted.test.omega3;
-busted.test_Q_component_3[29][17]:=0.4256503784977386*t*busted.test.theta_AT*busted.test.omega3;
-busted.test_Q_component_3[29][21]:=0.1818409092376876*t*busted.test.theta_CT*busted.test.omega3;
-busted.test_Q_component_3[29][25]:=0.1563402972714242*t*busted.test.theta_GT*busted.test.omega3;
-busted.test_Q_component_3[29][28]:=0.5074830879161225*t*busted.test.theta_AC;
-busted.test_Q_component_3[29][30]:=0.1963563685387479*t*busted.test.theta_CG;
-busted.test_Q_component_3[29][31]:=0.1989860284705866*t*busted.test.theta_CT;
-busted.test_Q_component_3[29][45]:=0.2567033972679326*t*busted.test.theta_CG*busted.test.omega3;
-busted.test_Q_component_3[29][58]:=0.257146542110382*t*busted.test.theta_CT*busted.test.omega3;
-busted.test_Q_component_3[30][14]:=0.3148753970510747*t*busted.test.theta_AC*busted.test.omega3;
-busted.test_Q_component_3[30][18]:=0.4256503784977386*t*busted.test.theta_AT*busted.test.omega3;
-busted.test_Q_component_3[30][22]:=0.1818409092376876*t*busted.test.theta_CT*busted.test.omega3;
-busted.test_Q_component_3[30][26]:=0.1563402972714242*t*busted.test.theta_GT*busted.test.omega3;
-busted.test_Q_component_3[30][28]:=0.5074830879161225*t*busted.test.theta_AG;
-busted.test_Q_component_3[30][29]:=0.09717451507454297*t*busted.test.theta_CG;
-busted.test_Q_component_3[30][31]:=0.1989860284705866*t*busted.test.theta_GT;
-busted.test_Q_component_3[30][46]:=0.2567033972679326*t*busted.test.theta_CG*busted.test.omega3;
-busted.test_Q_component_3[30][59]:=0.257146542110382*t*busted.test.theta_CT;
-busted.test_Q_component_3[31][15]:=0.3148753970510747*t*busted.test.theta_AC*busted.test.omega3;
-busted.test_Q_component_3[31][19]:=0.4256503784977386*t*busted.test.theta_AT*busted.test.omega3;
-busted.test_Q_component_3[31][23]:=0.1818409092376876*t*busted.test.theta_CT*busted.test.omega3;
-busted.test_Q_component_3[31][27]:=0.1563402972714242*t*busted.test.theta_GT*busted.test.omega3;
-busted.test_Q_component_3[31][28]:=0.5074830879161225*t*busted.test.theta_AT;
-busted.test_Q_component_3[31][29]:=0.09717451507454297*t*busted.test.theta_CT;
-busted.test_Q_component_3[31][30]:=0.1963563685387479*t*busted.test.theta_GT;
-busted.test_Q_component_3[31][47]:=0.2567033972679326*t*busted.test.theta_CG*busted.test.omega3;
-busted.test_Q_component_3[31][60]:=0.257146542110382*t*busted.test.theta_CT*busted.test.omega3;
-busted.test_Q_component_3[32][0]:=0.3148753970510747*t*busted.test.theta_AG*busted.test.omega3;
-busted.test_Q_component_3[32][16]:=0.1712746635706107*t*busted.test.theta_CG*busted.test.omega3;
-busted.test_Q_component_3[32][33]:=0.09717451507454297*t*busted.test.theta_AC*busted.test.omega3;
-busted.test_Q_component_3[32][34]:=0.1963563685387479*t*busted.test.theta_AG;
-busted.test_Q_component_3[32][35]:=0.1989860284705866*t*busted.test.theta_AT*busted.test.omega3;
-busted.test_Q_component_3[32][36]:=0.1818409092376876*t*busted.test.theta_AC*busted.test.omega3;
-busted.test_Q_component_3[32][40]:=0.1563402972714242*t*busted.test.theta_AG*busted.test.omega3;
-busted.test_Q_component_3[32][44]:=0.2361684149931496*t*busted.test.theta_AT*busted.test.omega3;
-busted.test_Q_component_3[33][1]:=0.3148753970510747*t*busted.test.theta_AG*busted.test.omega3;
-busted.test_Q_component_3[33][17]:=0.1712746635706107*t*busted.test.theta_CG*busted.test.omega3;
-busted.test_Q_component_3[33][32]:=0.5074830879161225*t*busted.test.theta_AC*busted.test.omega3;
-busted.test_Q_component_3[33][34]:=0.1963563685387479*t*busted.test.theta_CG*busted.test.omega3;
-busted.test_Q_component_3[33][35]:=0.1989860284705866*t*busted.test.theta_CT;
-busted.test_Q_component_3[33][37]:=0.1818409092376876*t*busted.test.theta_AC*busted.test.omega3;
-busted.test_Q_component_3[33][41]:=0.1563402972714242*t*busted.test.theta_AG*busted.test.omega3;
-busted.test_Q_component_3[33][45]:=0.2361684149931496*t*busted.test.theta_AT*busted.test.omega3;
-busted.test_Q_component_3[33][48]:=0.257146542110382*t*busted.test.theta_GT*busted.test.omega3;
-busted.test_Q_component_3[34][2]:=0.3148753970510747*t*busted.test.theta_AG*busted.test.omega3;
-busted.test_Q_component_3[34][18]:=0.1712746635706107*t*busted.test.theta_CG*busted.test.omega3;
-busted.test_Q_component_3[34][32]:=0.5074830879161225*t*busted.test.theta_AG;
-busted.test_Q_component_3[34][33]:=0.09717451507454297*t*busted.test.theta_CG*busted.test.omega3;
-busted.test_Q_component_3[34][35]:=0.1989860284705866*t*busted.test.theta_GT*busted.test.omega3;
-busted.test_Q_component_3[34][38]:=0.1818409092376876*t*busted.test.theta_AC*busted.test.omega3;
-busted.test_Q_component_3[34][42]:=0.1563402972714242*t*busted.test.theta_AG*busted.test.omega3;
-busted.test_Q_component_3[34][46]:=0.2361684149931496*t*busted.test.theta_AT*busted.test.omega3;
-busted.test_Q_component_3[35][3]:=0.3148753970510747*t*busted.test.theta_AG*busted.test.omega3;
-busted.test_Q_component_3[35][19]:=0.1712746635706107*t*busted.test.theta_CG*busted.test.omega3;
-busted.test_Q_component_3[35][32]:=0.5074830879161225*t*busted.test.theta_AT*busted.test.omega3;
-busted.test_Q_component_3[35][33]:=0.09717451507454297*t*busted.test.theta_CT;
-busted.test_Q_component_3[35][34]:=0.1963563685387479*t*busted.test.theta_GT*busted.test.omega3;
-busted.test_Q_component_3[35][39]:=0.1818409092376876*t*busted.test.theta_AC*busted.test.omega3;
-busted.test_Q_component_3[35][43]:=0.1563402972714242*t*busted.test.theta_AG*busted.test.omega3;
-busted.test_Q_component_3[35][47]:=0.2361684149931496*t*busted.test.theta_AT*busted.test.omega3;
-busted.test_Q_component_3[35][49]:=0.257146542110382*t*busted.test.theta_GT*busted.test.omega3;
-busted.test_Q_component_3[36][4]:=0.3148753970510747*t*busted.test.theta_AG*busted.test.omega3;
-busted.test_Q_component_3[36][20]:=0.1712746635706107*t*busted.test.theta_CG*busted.test.omega3;
-busted.test_Q_component_3[36][32]:=0.4256503784977386*t*busted.test.theta_AC*busted.test.omega3;
-busted.test_Q_component_3[36][37]:=0.09717451507454297*t*busted.test.theta_AC;
-busted.test_Q_component_3[36][38]:=0.1963563685387479*t*busted.test.theta_AG;
-busted.test_Q_component_3[36][39]:=0.1989860284705866*t*busted.test.theta_AT;
-busted.test_Q_component_3[36][40]:=0.1563402972714242*t*busted.test.theta_CG*busted.test.omega3;
-busted.test_Q_component_3[36][44]:=0.2361684149931496*t*busted.test.theta_CT*busted.test.omega3;
-busted.test_Q_component_3[36][50]:=0.257146542110382*t*busted.test.theta_GT*busted.test.omega3;
-busted.test_Q_component_3[37][5]:=0.3148753970510747*t*busted.test.theta_AG*busted.test.omega3;
-busted.test_Q_component_3[37][21]:=0.1712746635706107*t*busted.test.theta_CG*busted.test.omega3;
-busted.test_Q_component_3[37][33]:=0.4256503784977386*t*busted.test.theta_AC*busted.test.omega3;
-busted.test_Q_component_3[37][36]:=0.5074830879161225*t*busted.test.theta_AC;
-busted.test_Q_component_3[37][38]:=0.1963563685387479*t*busted.test.theta_CG;
-busted.test_Q_component_3[37][39]:=0.1989860284705866*t*busted.test.theta_CT;
-busted.test_Q_component_3[37][41]:=0.1563402972714242*t*busted.test.theta_CG*busted.test.omega3;
-busted.test_Q_component_3[37][45]:=0.2361684149931496*t*busted.test.theta_CT*busted.test.omega3;
-busted.test_Q_component_3[37][51]:=0.257146542110382*t*busted.test.theta_GT*busted.test.omega3;
-busted.test_Q_component_3[38][6]:=0.3148753970510747*t*busted.test.theta_AG*busted.test.omega3;
-busted.test_Q_component_3[38][22]:=0.1712746635706107*t*busted.test.theta_CG*busted.test.omega3;
-busted.test_Q_component_3[38][34]:=0.4256503784977386*t*busted.test.theta_AC*busted.test.omega3;
-busted.test_Q_component_3[38][36]:=0.5074830879161225*t*busted.test.theta_AG;
-busted.test_Q_component_3[38][37]:=0.09717451507454297*t*busted.test.theta_CG;
-busted.test_Q_component_3[38][39]:=0.1989860284705866*t*busted.test.theta_GT;
-busted.test_Q_component_3[38][42]:=0.1563402972714242*t*busted.test.theta_CG*busted.test.omega3;
-busted.test_Q_component_3[38][46]:=0.2361684149931496*t*busted.test.theta_CT*busted.test.omega3;
-busted.test_Q_component_3[38][52]:=0.257146542110382*t*busted.test.theta_GT*busted.test.omega3;
-busted.test_Q_component_3[39][7]:=0.3148753970510747*t*busted.test.theta_AG*busted.test.omega3;
-busted.test_Q_component_3[39][23]:=0.1712746635706107*t*busted.test.theta_CG*busted.test.omega3;
-busted.test_Q_component_3[39][35]:=0.4256503784977386*t*busted.test.theta_AC*busted.test.omega3;
-busted.test_Q_component_3[39][36]:=0.5074830879161225*t*busted.test.theta_AT;
-busted.test_Q_component_3[39][37]:=0.09717451507454297*t*busted.test.theta_CT;
-busted.test_Q_component_3[39][38]:=0.1963563685387479*t*busted.test.theta_GT;
-busted.test_Q_component_3[39][43]:=0.1563402972714242*t*busted.test.theta_CG*busted.test.omega3;
-busted.test_Q_component_3[39][47]:=0.2361684149931496*t*busted.test.theta_CT*busted.test.omega3;
-busted.test_Q_component_3[39][53]:=0.257146542110382*t*busted.test.theta_GT*busted.test.omega3;
-busted.test_Q_component_3[40][8]:=0.3148753970510747*t*busted.test.theta_AG*busted.test.omega3;
-busted.test_Q_component_3[40][24]:=0.1712746635706107*t*busted.test.theta_CG*busted.test.omega3;
-busted.test_Q_component_3[40][32]:=0.4256503784977386*t*busted.test.theta_AG*busted.test.omega3;
-busted.test_Q_component_3[40][36]:=0.1818409092376876*t*busted.test.theta_CG*busted.test.omega3;
-busted.test_Q_component_3[40][41]:=0.09717451507454297*t*busted.test.theta_AC;
-busted.test_Q_component_3[40][42]:=0.1963563685387479*t*busted.test.theta_AG;
-busted.test_Q_component_3[40][43]:=0.1989860284705866*t*busted.test.theta_AT;
-busted.test_Q_component_3[40][44]:=0.2361684149931496*t*busted.test.theta_GT*busted.test.omega3;
-busted.test_Q_component_3[41][9]:=0.3148753970510747*t*busted.test.theta_AG*busted.test.omega3;
-busted.test_Q_component_3[41][25]:=0.1712746635706107*t*busted.test.theta_CG*busted.test.omega3;
-busted.test_Q_component_3[41][33]:=0.4256503784977386*t*busted.test.theta_AG*busted.test.omega3;
-busted.test_Q_component_3[41][37]:=0.1818409092376876*t*busted.test.theta_CG*busted.test.omega3;
-busted.test_Q_component_3[41][40]:=0.5074830879161225*t*busted.test.theta_AC;
-busted.test_Q_component_3[41][42]:=0.1963563685387479*t*busted.test.theta_CG;
-busted.test_Q_component_3[41][43]:=0.1989860284705866*t*busted.test.theta_CT;
-busted.test_Q_component_3[41][45]:=0.2361684149931496*t*busted.test.theta_GT*busted.test.omega3;
-busted.test_Q_component_3[41][54]:=0.257146542110382*t*busted.test.theta_GT*busted.test.omega3;
-busted.test_Q_component_3[42][10]:=0.3148753970510747*t*busted.test.theta_AG*busted.test.omega3;
-busted.test_Q_component_3[42][26]:=0.1712746635706107*t*busted.test.theta_CG*busted.test.omega3;
-busted.test_Q_component_3[42][34]:=0.4256503784977386*t*busted.test.theta_AG*busted.test.omega3;
-busted.test_Q_component_3[42][38]:=0.1818409092376876*t*busted.test.theta_CG*busted.test.omega3;
-busted.test_Q_component_3[42][40]:=0.5074830879161225*t*busted.test.theta_AG;
-busted.test_Q_component_3[42][41]:=0.09717451507454297*t*busted.test.theta_CG;
-busted.test_Q_component_3[42][43]:=0.1989860284705866*t*busted.test.theta_GT;
-busted.test_Q_component_3[42][46]:=0.2361684149931496*t*busted.test.theta_GT*busted.test.omega3;
-busted.test_Q_component_3[42][55]:=0.257146542110382*t*busted.test.theta_GT*busted.test.omega3;
-busted.test_Q_component_3[43][11]:=0.3148753970510747*t*busted.test.theta_AG*busted.test.omega3;
-busted.test_Q_component_3[43][27]:=0.1712746635706107*t*busted.test.theta_CG*busted.test.omega3;
-busted.test_Q_component_3[43][35]:=0.4256503784977386*t*busted.test.theta_AG*busted.test.omega3;
-busted.test_Q_component_3[43][39]:=0.1818409092376876*t*busted.test.theta_CG*busted.test.omega3;
-busted.test_Q_component_3[43][40]:=0.5074830879161225*t*busted.test.theta_AT;
-busted.test_Q_component_3[43][41]:=0.09717451507454297*t*busted.test.theta_CT;
-busted.test_Q_component_3[43][42]:=0.1963563685387479*t*busted.test.theta_GT;
-busted.test_Q_component_3[43][47]:=0.2361684149931496*t*busted.test.theta_GT*busted.test.omega3;
-busted.test_Q_component_3[43][56]:=0.257146542110382*t*busted.test.theta_GT*busted.test.omega3;
-busted.test_Q_component_3[44][12]:=0.3148753970510747*t*busted.test.theta_AG*busted.test.omega3;
-busted.test_Q_component_3[44][28]:=0.1712746635706107*t*busted.test.theta_CG*busted.test.omega3;
-busted.test_Q_component_3[44][32]:=0.4256503784977386*t*busted.test.theta_AT*busted.test.omega3;
-busted.test_Q_component_3[44][36]:=0.1818409092376876*t*busted.test.theta_CT*busted.test.omega3;
-busted.test_Q_component_3[44][40]:=0.1563402972714242*t*busted.test.theta_GT*busted.test.omega3;
-busted.test_Q_component_3[44][45]:=0.09717451507454297*t*busted.test.theta_AC;
-busted.test_Q_component_3[44][46]:=0.1963563685387479*t*busted.test.theta_AG;
-busted.test_Q_component_3[44][47]:=0.1989860284705866*t*busted.test.theta_AT;
-busted.test_Q_component_3[44][57]:=0.257146542110382*t*busted.test.theta_GT*busted.test.omega3;
-busted.test_Q_component_3[45][13]:=0.3148753970510747*t*busted.test.theta_AG*busted.test.omega3;
-busted.test_Q_component_3[45][29]:=0.1712746635706107*t*busted.test.theta_CG*busted.test.omega3;
-busted.test_Q_component_3[45][33]:=0.4256503784977386*t*busted.test.theta_AT*busted.test.omega3;
-busted.test_Q_component_3[45][37]:=0.1818409092376876*t*busted.test.theta_CT*busted.test.omega3;
-busted.test_Q_component_3[45][41]:=0.1563402972714242*t*busted.test.theta_GT*busted.test.omega3;
-busted.test_Q_component_3[45][44]:=0.5074830879161225*t*busted.test.theta_AC;
-busted.test_Q_component_3[45][46]:=0.1963563685387479*t*busted.test.theta_CG;
-busted.test_Q_component_3[45][47]:=0.1989860284705866*t*busted.test.theta_CT;
-busted.test_Q_component_3[45][58]:=0.257146542110382*t*busted.test.theta_GT*busted.test.omega3;
-busted.test_Q_component_3[46][14]:=0.3148753970510747*t*busted.test.theta_AG*busted.test.omega3;
-busted.test_Q_component_3[46][30]:=0.1712746635706107*t*busted.test.theta_CG*busted.test.omega3;
-busted.test_Q_component_3[46][34]:=0.4256503784977386*t*busted.test.theta_AT*busted.test.omega3;
-busted.test_Q_component_3[46][38]:=0.1818409092376876*t*busted.test.theta_CT*busted.test.omega3;
-busted.test_Q_component_3[46][42]:=0.1563402972714242*t*busted.test.theta_GT*busted.test.omega3;
-busted.test_Q_component_3[46][44]:=0.5074830879161225*t*busted.test.theta_AG;
-busted.test_Q_component_3[46][45]:=0.09717451507454297*t*busted.test.theta_CG;
-busted.test_Q_component_3[46][47]:=0.1989860284705866*t*busted.test.theta_GT;
-busted.test_Q_component_3[46][59]:=0.257146542110382*t*busted.test.theta_GT*busted.test.omega3;
-busted.test_Q_component_3[47][15]:=0.3148753970510747*t*busted.test.theta_AG*busted.test.omega3;
-busted.test_Q_component_3[47][31]:=0.1712746635706107*t*busted.test.theta_CG*busted.test.omega3;
-busted.test_Q_component_3[47][35]:=0.4256503784977386*t*busted.test.theta_AT*busted.test.omega3;
-busted.test_Q_component_3[47][39]:=0.1818409092376876*t*busted.test.theta_CT*busted.test.omega3;
-busted.test_Q_component_3[47][43]:=0.1563402972714242*t*busted.test.theta_GT*busted.test.omega3;
-busted.test_Q_component_3[47][44]:=0.5074830879161225*t*busted.test.theta_AT;
-busted.test_Q_component_3[47][45]:=0.09717451507454297*t*busted.test.theta_CT;
-busted.test_Q_component_3[47][46]:=0.1963563685387479*t*busted.test.theta_GT;
-busted.test_Q_component_3[47][60]:=0.257146542110382*t*busted.test.theta_GT*busted.test.omega3;
-busted.test_Q_component_3[48][1]:=0.3148753970510747*t*busted.test.theta_AT*busted.test.omega3;
-busted.test_Q_component_3[48][17]:=0.1712746635706107*t*busted.test.theta_CT*busted.test.omega3;
-busted.test_Q_component_3[48][33]:=0.2567033972679326*t*busted.test.theta_GT*busted.test.omega3;
-busted.test_Q_component_3[48][49]:=0.1989860284705866*t*busted.test.theta_CT;
-busted.test_Q_component_3[48][51]:=0.1818409092376876*t*busted.test.theta_AC*busted.test.omega3;
-busted.test_Q_component_3[48][54]:=0.1563402972714242*t*busted.test.theta_AG*busted.test.omega3;
-busted.test_Q_component_3[48][58]:=0.2361684149931496*t*busted.test.theta_AT*busted.test.omega3;
-busted.test_Q_component_3[49][3]:=0.3148753970510747*t*busted.test.theta_AT*busted.test.omega3;
-busted.test_Q_component_3[49][19]:=0.1712746635706107*t*busted.test.theta_CT*busted.test.omega3;
-busted.test_Q_component_3[49][35]:=0.2567033972679326*t*busted.test.theta_GT*busted.test.omega3;
-busted.test_Q_component_3[49][48]:=0.09717451507454297*t*busted.test.theta_CT;
-busted.test_Q_component_3[49][53]:=0.1818409092376876*t*busted.test.theta_AC*busted.test.omega3;
-busted.test_Q_component_3[49][56]:=0.1563402972714242*t*busted.test.theta_AG*busted.test.omega3;
-busted.test_Q_component_3[49][60]:=0.2361684149931496*t*busted.test.theta_AT*busted.test.omega3;
-busted.test_Q_component_3[50][4]:=0.3148753970510747*t*busted.test.theta_AT*busted.test.omega3;
-busted.test_Q_component_3[50][20]:=0.1712746635706107*t*busted.test.theta_CT*busted.test.omega3;
-busted.test_Q_component_3[50][36]:=0.2567033972679326*t*busted.test.theta_GT*busted.test.omega3;
-busted.test_Q_component_3[50][51]:=0.09717451507454297*t*busted.test.theta_AC;
-busted.test_Q_component_3[50][52]:=0.1963563685387479*t*busted.test.theta_AG;
-busted.test_Q_component_3[50][53]:=0.1989860284705866*t*busted.test.theta_AT;
-busted.test_Q_component_3[50][57]:=0.2361684149931496*t*busted.test.theta_CT*busted.test.omega3;
-busted.test_Q_component_3[51][5]:=0.3148753970510747*t*busted.test.theta_AT*busted.test.omega3;
-busted.test_Q_component_3[51][21]:=0.1712746635706107*t*busted.test.theta_CT*busted.test.omega3;
-busted.test_Q_component_3[51][37]:=0.2567033972679326*t*busted.test.theta_GT*busted.test.omega3;
-busted.test_Q_component_3[51][48]:=0.4256503784977386*t*busted.test.theta_AC*busted.test.omega3;
-busted.test_Q_component_3[51][50]:=0.5074830879161225*t*busted.test.theta_AC;
-busted.test_Q_component_3[51][52]:=0.1963563685387479*t*busted.test.theta_CG;
-busted.test_Q_component_3[51][53]:=0.1989860284705866*t*busted.test.theta_CT;
-busted.test_Q_component_3[51][54]:=0.1563402972714242*t*busted.test.theta_CG*busted.test.omega3;
-busted.test_Q_component_3[51][58]:=0.2361684149931496*t*busted.test.theta_CT*busted.test.omega3;
-busted.test_Q_component_3[52][6]:=0.3148753970510747*t*busted.test.theta_AT*busted.test.omega3;
-busted.test_Q_component_3[52][22]:=0.1712746635706107*t*busted.test.theta_CT*busted.test.omega3;
-busted.test_Q_component_3[52][38]:=0.2567033972679326*t*busted.test.theta_GT*busted.test.omega3;
-busted.test_Q_component_3[52][50]:=0.5074830879161225*t*busted.test.theta_AG;
-busted.test_Q_component_3[52][51]:=0.09717451507454297*t*busted.test.theta_CG;
-busted.test_Q_component_3[52][53]:=0.1989860284705866*t*busted.test.theta_GT;
-busted.test_Q_component_3[52][55]:=0.1563402972714242*t*busted.test.theta_CG*busted.test.omega3;
-busted.test_Q_component_3[52][59]:=0.2361684149931496*t*busted.test.theta_CT*busted.test.omega3;
-busted.test_Q_component_3[53][7]:=0.3148753970510747*t*busted.test.theta_AT*busted.test.omega3;
-busted.test_Q_component_3[53][23]:=0.1712746635706107*t*busted.test.theta_CT*busted.test.omega3;
-busted.test_Q_component_3[53][39]:=0.2567033972679326*t*busted.test.theta_GT*busted.test.omega3;
-busted.test_Q_component_3[53][49]:=0.4256503784977386*t*busted.test.theta_AC*busted.test.omega3;
-busted.test_Q_component_3[53][50]:=0.5074830879161225*t*busted.test.theta_AT;
-busted.test_Q_component_3[53][51]:=0.09717451507454297*t*busted.test.theta_CT;
-busted.test_Q_component_3[53][52]:=0.1963563685387479*t*busted.test.theta_GT;
-busted.test_Q_component_3[53][56]:=0.1563402972714242*t*busted.test.theta_CG*busted.test.omega3;
-busted.test_Q_component_3[53][60]:=0.2361684149931496*t*busted.test.theta_CT*busted.test.omega3;
-busted.test_Q_component_3[54][9]:=0.3148753970510747*t*busted.test.theta_AT*busted.test.omega3;
-busted.test_Q_component_3[54][25]:=0.1712746635706107*t*busted.test.theta_CT*busted.test.omega3;
-busted.test_Q_component_3[54][41]:=0.2567033972679326*t*busted.test.theta_GT*busted.test.omega3;
-busted.test_Q_component_3[54][48]:=0.4256503784977386*t*busted.test.theta_AG*busted.test.omega3;
-busted.test_Q_component_3[54][51]:=0.1818409092376876*t*busted.test.theta_CG*busted.test.omega3;
-busted.test_Q_component_3[54][55]:=0.1963563685387479*t*busted.test.theta_CG*busted.test.omega3;
-busted.test_Q_component_3[54][56]:=0.1989860284705866*t*busted.test.theta_CT;
-busted.test_Q_component_3[54][58]:=0.2361684149931496*t*busted.test.theta_GT*busted.test.omega3;
-busted.test_Q_component_3[55][10]:=0.3148753970510747*t*busted.test.theta_AT*busted.test.omega3;
-busted.test_Q_component_3[55][26]:=0.1712746635706107*t*busted.test.theta_CT*busted.test.omega3;
-busted.test_Q_component_3[55][42]:=0.2567033972679326*t*busted.test.theta_GT*busted.test.omega3;
-busted.test_Q_component_3[55][52]:=0.1818409092376876*t*busted.test.theta_CG*busted.test.omega3;
-busted.test_Q_component_3[55][54]:=0.09717451507454297*t*busted.test.theta_CG*busted.test.omega3;
-busted.test_Q_component_3[55][56]:=0.1989860284705866*t*busted.test.theta_GT*busted.test.omega3;
-busted.test_Q_component_3[55][59]:=0.2361684149931496*t*busted.test.theta_GT*busted.test.omega3;
-busted.test_Q_component_3[56][11]:=0.3148753970510747*t*busted.test.theta_AT*busted.test.omega3;
-busted.test_Q_component_3[56][27]:=0.1712746635706107*t*busted.test.theta_CT*busted.test.omega3;
-busted.test_Q_component_3[56][43]:=0.2567033972679326*t*busted.test.theta_GT*busted.test.omega3;
-busted.test_Q_component_3[56][49]:=0.4256503784977386*t*busted.test.theta_AG*busted.test.omega3;
-busted.test_Q_component_3[56][53]:=0.1818409092376876*t*busted.test.theta_CG*busted.test.omega3;
-busted.test_Q_component_3[56][54]:=0.09717451507454297*t*busted.test.theta_CT;
-busted.test_Q_component_3[56][55]:=0.1963563685387479*t*busted.test.theta_GT*busted.test.omega3;
-busted.test_Q_component_3[56][60]:=0.2361684149931496*t*busted.test.theta_GT*busted.test.omega3;
-busted.test_Q_component_3[57][12]:=0.3148753970510747*t*busted.test.theta_AT*busted.test.omega3;
-busted.test_Q_component_3[57][28]:=0.1712746635706107*t*busted.test.theta_CT;
-busted.test_Q_component_3[57][44]:=0.2567033972679326*t*busted.test.theta_GT*busted.test.omega3;
-busted.test_Q_component_3[57][50]:=0.1818409092376876*t*busted.test.theta_CT*busted.test.omega3;
-busted.test_Q_component_3[57][58]:=0.09717451507454297*t*busted.test.theta_AC*busted.test.omega3;
-busted.test_Q_component_3[57][59]:=0.1963563685387479*t*busted.test.theta_AG;
-busted.test_Q_component_3[57][60]:=0.1989860284705866*t*busted.test.theta_AT*busted.test.omega3;
-busted.test_Q_component_3[58][13]:=0.3148753970510747*t*busted.test.theta_AT*busted.test.omega3;
-busted.test_Q_component_3[58][29]:=0.1712746635706107*t*busted.test.theta_CT*busted.test.omega3;
-busted.test_Q_component_3[58][45]:=0.2567033972679326*t*busted.test.theta_GT*busted.test.omega3;
-busted.test_Q_component_3[58][48]:=0.4256503784977386*t*busted.test.theta_AT*busted.test.omega3;
-busted.test_Q_component_3[58][51]:=0.1818409092376876*t*busted.test.theta_CT*busted.test.omega3;
-busted.test_Q_component_3[58][54]:=0.1563402972714242*t*busted.test.theta_GT*busted.test.omega3;
-busted.test_Q_component_3[58][57]:=0.5074830879161225*t*busted.test.theta_AC*busted.test.omega3;
-busted.test_Q_component_3[58][59]:=0.1963563685387479*t*busted.test.theta_CG*busted.test.omega3;
-busted.test_Q_component_3[58][60]:=0.1989860284705866*t*busted.test.theta_CT;
-busted.test_Q_component_3[59][14]:=0.3148753970510747*t*busted.test.theta_AT*busted.test.omega3;
-busted.test_Q_component_3[59][30]:=0.1712746635706107*t*busted.test.theta_CT;
-busted.test_Q_component_3[59][46]:=0.2567033972679326*t*busted.test.theta_GT*busted.test.omega3;
-busted.test_Q_component_3[59][52]:=0.1818409092376876*t*busted.test.theta_CT*busted.test.omega3;
-busted.test_Q_component_3[59][55]:=0.1563402972714242*t*busted.test.theta_GT*busted.test.omega3;
-busted.test_Q_component_3[59][57]:=0.5074830879161225*t*busted.test.theta_AG;
-busted.test_Q_component_3[59][58]:=0.09717451507454297*t*busted.test.theta_CG*busted.test.omega3;
-busted.test_Q_component_3[59][60]:=0.1989860284705866*t*busted.test.theta_GT*busted.test.omega3;
-busted.test_Q_component_3[60][15]:=0.3148753970510747*t*busted.test.theta_AT*busted.test.omega3;
-busted.test_Q_component_3[60][31]:=0.1712746635706107*t*busted.test.theta_CT*busted.test.omega3;
-busted.test_Q_component_3[60][47]:=0.2567033972679326*t*busted.test.theta_GT*busted.test.omega3;
-busted.test_Q_component_3[60][49]:=0.4256503784977386*t*busted.test.theta_AT*busted.test.omega3;
-busted.test_Q_component_3[60][53]:=0.1818409092376876*t*busted.test.theta_CT*busted.test.omega3;
-busted.test_Q_component_3[60][56]:=0.1563402972714242*t*busted.test.theta_GT*busted.test.omega3;
-busted.test_Q_component_3[60][57]:=0.5074830879161225*t*busted.test.theta_AT*busted.test.omega3;
-busted.test_Q_component_3[60][58]:=0.09717451507454297*t*busted.test.theta_CT;
-busted.test_Q_component_3[60][59]:=0.1963563685387479*t*busted.test.theta_GT*busted.test.omega3;
-
-
-busted.test_pi={
-{0.07535940345366139} 
-{0.01443006409728228} 
-{0.02915821068672351} 
-{0.02954870567752823} 
-{0.03219408024958758} 
-{0.006164627375802654} 
-{0.01245659774045292} 
-{0.01262342001471309} 
-{0.0276793164843978} 
-{0.005300125700761717} 
-{0.01070973633984303} 
-{0.01085316415297191} 
-{0.0418125103783387} 
-{0.008006395714089126} 
-{0.01617817990958604} 
-{0.0163948426631036} 
-{0.0409913146415633} 
-{0.007849150478922548} 
-{0.01586044121725868} 
-{0.01607284872448998} 
-{0.01751178502783737} 
-{0.003353213651232053} 
-{0.006775694789785172} 
-{0.006866436807635995} 
-{0.01505600521072376} 
-{0.002882972930821469} 
-{0.005825499564956559} 
-{0.005903516300053625} 
-{0.02274367484777162} 
-{0.004355032959661065} 
-{0.008800028033786655} 
-{0.008917880494044083} 
-{0.06143704799998004} 
-{0.01176416611541591} 
-{0.0237713451467977} 
-{0.0240896977132239} 
-{0.0262463496652457} 
-{0.005025736545566795} 
-{0.01015528996016046} 
-{0.01029129247081581} 
-{0.02256567087217255} 
-{0.004320948178469224} 
-{0.008731154380523415} 
-{0.00884808446536876} 
-{0.034087812394816} 
-{0.006527245376826684} 
-{0.01318932435908579} 
-{0.01336595951511979} 
-{0.01178447449308153} 
-{0.02413128354890585} 
-{0.0262916585104385} 
-{0.005034412430862358} 
-{0.01017282094890981} 
-{0.01030905823951665} 
-{0.004328407393735399} 
-{0.008746226896405704} 
-{0.008863358836639712} 
-{0.03414665788893068} 
-{0.006538513303760755} 
-{0.0132120929750345} 
-{0.01338903305480236} 
-};
-Model busted.test=('Exp(busted.test_Q_component_1)*1*busted.test.bsrel_mixture_aux_0+Exp(busted.test_Q_component_2)*1*(1-busted.test.bsrel_mixture_aux_0)*busted.test.bsrel_mixture_aux_1+Exp(busted.test_Q_component_3)*1*(1-busted.test.bsrel_mixture_aux_0)*(1-busted.test.bsrel_mixture_aux_1)',busted.test_pi,EXPLICIT_FORM_MATRIX_EXPONENTIAL);
-TRY_NUMERIC_SEQUENCE_MATCH=0;
-ACCEPT_ROOTED_TREES=0;
-Tree QCdustmY.tree_id_0=((((D_CD_83_ELI{busted.background},D_CD_83_NDK{busted.background})Node3{busted.background},D_UG_94_94UG114{busted.background})Node2{busted.background},D_CD_84_84ZR085{busted.background})Node1{busted.background},B_US_83_RF{busted.background},((B_FR_83_HXB2{busted.background},B_US_86_JRFL{busted.background})Node10{busted.background},B_US_90_WEAU160{busted.test})Node9{busted.background});
-
-QCdustmY.tree_id_0.D_CD_83_ELI.t=0.1370833707498818;
-QCdustmY.tree_id_0.D_CD_83_NDK.t=0.06548157292895862;
-QCdustmY.tree_id_0.Node3.t=0.08713663976914707;
-QCdustmY.tree_id_0.D_UG_94_94UG114.t=0.4280587759297035;
-QCdustmY.tree_id_0.Node2.t=0.01513176299488742;
-QCdustmY.tree_id_0.D_CD_84_84ZR085.t=0.2130038858362291;
-QCdustmY.tree_id_0.Node1.t=0.1846586758901705;
-QCdustmY.tree_id_0.B_US_83_RF.t=0.2063734346567031;
-QCdustmY.tree_id_0.B_FR_83_HXB2.t=0.08448292129897501;
-QCdustmY.tree_id_0.B_US_86_JRFL.t=0.1299787017728399;
-QCdustmY.tree_id_0.Node10.t=0.01154139173279806;
-QCdustmY.tree_id_0.B_US_90_WEAU160.t=0.1759147205880889;
-QCdustmY.tree_id_0.Node9.t=0.03592645553508322;SetParameter (DEFER_CONSTRAINT_APPLICATION, 1, 0);
-SetParameter (DEFER_CONSTRAINT_APPLICATION, 0, 0);
-
-DataSet busted.codon_data = ReadDataFile(USE_NEXUS_FILE_DATA);
-DataSetFilter busted.filter.default = CreateFilter(busted.codon_data,3,"0-1319","4,5,7,6,1,0,2,3","TAA,TAG,TGA");
-ASSUME_REVERSIBLE_MODELS=1;
-USE_LAST_RESULTS=0;
-LikelihoodFunction QCdustmY.likelihoodFunction = (busted.filter.default,QCdustmY.tree_id_0);
-
-END;
\ No newline at end of file
diff -r b110a31a9c61 -r ec783806a5c3 test-data/conv-out1.nex
--- a/test-data/conv-out1.nex	Thu Aug 18 13:53:29 2022 +0000
+++ b/test-data/conv-out1.nex	Thu Mar 02 15:15:38 2023 +0000
@@ -16,8 +16,8 @@
 	;
 
 MATRIX
- ???????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????ET
- ?????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????
+ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ET
+ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
  LVFFFVLLPLVSSQCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNGTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSKTQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLVRDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIYQTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGLSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQGVNCTEVPVAIHADQLTPTWRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTQTNSPRRARSVASQSIIAYTMSLGAENSVAYSNNSIAIPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDLSKPSKRSFIEDLLFNKVTLADAGFIKQYGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQIITTDNTFVSGNCDVVIGIVNNTVYDPLQPELDSFKEELDKYFKNHTSPDVDLGDISGINASVVNIQKEIDRLNEVAKNLNESLIDLQELGKYEQYIKWPWYIWLGFIAGLIAIVMVTIMLCCMTSCCSCLKGCCSCGSCCKFDEDDSEPVLKGVKLHYT
  MYVFLVLLPLVSSQCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNGTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSKTQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLVRDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIYQTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPVTVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQGVNCTEVPVAIHADQLTPTWRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTQTNSPRRARSVASQSIIAYTMSLGAENSVAYSNNSIAIPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPSKRSFIEDLLFNKVTLADAGFIKQYGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQIITTDNTFVSGNCDVVIGIVNNTVYDPLQPELDSFKEELDKYFKNHTSPDVDLGDISGINASVVNIQKEIDRLNEVAKNLNESLIDLQELGKYEQYIKWPWYIWLGFIAGLIAIVMVTIMLCCMTSCCSCLKGCCSCGSCCKFDEDDSEPVLKGVKLHYT
  MLVFLVLLPLVSSQCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNGTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSKTQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLVRDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIYQTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQGVNCTEVPVAIHADQLTPTWRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTQTNSPRRARSVASQSIIAYTMSLGAENSVAYSNNSIAIPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPSKRSFIEDLLFNKVTLADAGFIKQYGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQIITTDNTFVSGNCDVVIGIVNNTVYDPLQPELDSFKEELDKYFKNHTSPDVDLGDISGINASVVNIQKEIDRLNEVAKNLNESLIDLQELGKYEQYIKWPWYIWLGFIAGLIAIVMVTIMLCCMTSCCSCLKGCCSCGSCCKFDEDDSEPVLKGVKLHYT
diff -r b110a31a9c61 -r ec783806a5c3 test-data/relax-in1.nhx
--- a/test-data/relax-in1.nhx	Thu Aug 18 13:53:29 2022 +0000
+++ b/test-data/relax-in1.nhx	Thu Mar 02 15:15:38 2023 +0000
@@ -1,1 +1,1 @@
-(((Pig:0.147969,Cow{TEST}:0.21343):0.085099,Baboon:0.011873):0.340802,Rat:0.050958)
+(((Pig:0.147969,Cow{TEST}:0.21343):0.085099,Baboon:0.011873):0.340802,Rat:0.050958);
diff -r b110a31a9c61 -r ec783806a5c3 test-data/slac-out1.json
--- a/test-data/slac-out1.json	Thu Aug 18 13:53:29 2022 +0000
+++ /dev/null	Thu Jan 01 00:00:00 1970 +0000
@@ -1,2076 +0,0 @@
-{
- "MLE":{
-   "content":{
-     "0":{
-       "by-branch":{
-         "AVERAGED":          [
-[131.3409038539508, 387.3032052553191, 18.83333333333334, 62.16666666666666, 0.2532389774551154, 0.1433927495601502, 0.1605116245440958, 0.009922319377965909, 0.3896479078188506, 0.7050801922163503, 0.190671339253091],
-          [129.582341679606, 390.2657462377136, 20.16666666666666, 84.83333333333334, 0.2492696322088151, 0.1556282006118473, 0.2173732492568301, 0.03578822166983051, 0.1057124571474986, 0.9315947329811959, 0.2526189686412594],
-          [133.5634277511288, 389.0892183853288, 9, 31, 0.255549127586847, 0.06738371537431539, 0.07967324339812369, 0.007123167975176309, 0.4078805639677862, 0.7273413969784412, 0.100661445687484],
-          [136.3001744404261, 388.2752414674823, 20.66666666666666, 73.33333333333334, 0.2598295122247097, 0.1516261204471138, 0.1888694552250377, 0.02158671423873519, 0.2256328450945964, 0.8402434326037131, 0.2128981270938909],
-          [133.8191805302023, 389.2442828476442, 23, 92, 0.2558373694580443, 0.1718737172718601, 0.2363554303917937, 0.03737442747928117, 0.1006659765808149, 0.9336498751512877, 0.270986057489719],
-          [140.2315863698817, 396.7622548627548, 7.5, 18.5, 0.2611418895382275, 0.05348295768556476, 0.0466274192498462, -0.003973557954650256, 0.7090493474259939, 0.4503697460596697, 0.0674227399326417],
-          [134.7817325168444, 392.4918226549124, 0, 3, 0.2556201258243265, 0, 0.007643471345994557, 0.004430253969516925, 0.4124619282373314, 1, 0.003845100000905624],
-          [136.1184811420076, 397.1417020142569, 1, 0, 0.255257162341183, 0.007346540981137861, 0, -0.004258149323861931, 1, 0.255257162341183, 0.001710698008755675],
-          [136.5467837843545, 396.817130340981, 6, 8, 0.2560105402111387, 0.04394098369593, 0.02016041997260975, -0.01378351956376455, 0.9568131059753749, 0.1225532921657104, 0.0261290773391622],
-          [0, 0, 0, 0, null, null, null, null, 1, 1, 0],
-          [136.6003799486803, 396.6078513587676, 0, 1, 0.2561858049597822, 0, 0.002521382258505542, 0.001461425477216891, 0.7438141950402177, 1, 0.001852173963769908],
-          [136.9415154360939, 396.3923665097976, 4.5, 4.5, 0.2567650773216525, 0.03286074340326692, 0.01135238813911109, -0.01246651841466516, 0.9670681040365207, 0.116490042971819, 0.01816964082591924],
-          [138.8593313638795, 397.772580198107, 9, 39, 0.2587608533374368, 0.06481379329427697, 0.09804597385917452, 0.01926179784012569, 0.1682548120106906, 0.905709700565171, 0.1081901197733327],
-          [143.8068579584112, 396.4414008640307, 42.50000000000001, 70.5, 0.2661866199659049, 0.295535279772895, 0.1778320827399651, -0.06822228177164953, 0.9959804586708396, 0.007098480560500553, 0.28199060274564],
-          [145.8733144714348, 394.7876057082412, 10, 23, 0.2698055454478885, 0.06855263442963876, 0.05825917447113987, -0.005966221338044341, 0.7401529271181795, 0.3966272436071658, 0.06785010407729926],
-          [145.261732918168, 395.7720178098857, 21, 35, 0.2684892258989267, 0.1445666355352526, 0.08843475138460322, -0.03253475957690278, 0.9711633315400029, 0.05307382915791914, 0.1202934609265267] 
-          ],
-         "NAMES":          [
-["Pig"],
-          ["Cow"],
-          ["Node3"],
-          ["Horse"],
-          ["Cat"],
-          ["Node2"],
-          ["RhMonkey"],
-          ["Baboon"],
-          ["Node9"],
-          ["Human"],
-          ["Chimp"],
-          ["Node12"],
-          ["Node8"],
-          ["Node1"],
-          ["Rat"],
-          ["Mouse"] 
-          ],
-         "RESOLVED":          [
-[131.3409038539508, 387.3032052553191, 18.83333333333334, 62.16666666666666, 0.2532389774551154, 0.1433927495601502, 0.1605116245440958, 0.009922319377965909, 0.3896479078188506, 0.7050801922163503, 0.190671339253091],
-          [129.582341679606, 390.2657462377136, 20.16666666666666, 84.83333333333334, 0.2492696322088151, 0.1556282006118473, 0.2173732492568301, 0.03578822166983051, 0.1057124571474986, 0.9315947329811959, 0.2526189686412594],
-          [133.5634277511288, 389.0892183853288, 9, 31, 0.255549127586847, 0.06738371537431539, 0.07967324339812369, 0.007123167975176309, 0.4078805639677862, 0.7273413969784412, 0.100661445687484],
-          [136.3001744404261, 388.2752414674823, 20.66666666666666, 73.33333333333334, 0.2598295122247097, 0.1516261204471138, 0.1888694552250377, 0.02158671423873519, 0.2256328450945964, 0.8402434326037131, 0.2128981270938909],
-          [133.8191805302023, 389.2442828476442, 23, 92, 0.2558373694580443, 0.1718737172718601, 0.2363554303917937, 0.03737442747928117, 0.1006659765808149, 0.9336498751512877, 0.270986057489719],
-          [140.2315863698817, 396.7622548627548, 7.5, 18.5, 0.2611418895382275, 0.05348295768556476, 0.0466274192498462, -0.003973557954650256, 0.7090493474259939, 0.4503697460596697, 0.0674227399326417],
-          [134.7812926645948, 392.492262507162, 0, 2, 0.2556192916230938, 0, 0.005095641853483684, 0.002953499336458263, 0.5541026390037046, 1, 0.003845100000905624],
-          [136.1184811420076, 397.1417020142569, 1, 0, 0.255257162341183, 0.007346540981137861, 0, -0.004258149323861931, 1, 0.255257162341183, 0.001710698008755675],
-          [136.5467837843545, 396.817130340981, 6, 8, 0.2560105402111387, 0.04394098369593, 0.02016041997260975, -0.01378351956376455, 0.9568131059753749, 0.1225532921657104, 0.0261290773391622],
-          [0, 0, 0, 0, null, null, null, null, 1, 1, 0],
-          [136.6003799486803, 396.6078513587676, 0, 1, 0.2561858049597822, 0, 0.002521382258505542, 0.001461425477216891, 0.7438141950402177, 1, 0.001852173963769908],
-          [136.9415154360939, 396.3923665097976, 4.5, 4.5, 0.2567650773216525, 0.03286074340326692, 0.01135238813911109, -0.01246651841466516, 0.9670681040365207, 0.116490042971819, 0.01816964082591924],
-          [138.8593313638795, 397.772580198107, 9, 39, 0.2587608533374368, 0.06481379329427697, 0.09804597385917452, 0.01926179784012569, 0.1682548120106906, 0.905709700565171, 0.1081901197733327],
-          [143.8068579584112, 396.4414008640307, 42.50000000000001, 70.5, 0.2661866199659049, 0.295535279772895, 0.1778320827399651, -0.06822228177164953, 0.9959804586708396, 0.007098480560500553, 0.28199060274564],
-          [145.8733144714348, 394.7876057082412, 10, 23, 0.2698055454478885, 0.06855263442963876, 0.05825917447113987, -0.005966221338044341, 0.7401529271181795, 0.3966272436071658, 0.06785010407729926],
-          [145.261732918168, 395.7720178098857, 21, 35, 0.2684892258989267, 0.1445666355352526, 0.08843475138460322, -0.03253475957690278, 0.9711633315400029, 0.05307382915791914, 0.1202934609265267] 
-          ]
-        },
-       "by-site":{
-         "AVERAGED":          [
-[0.1812956120508565, 0.6769622889137586, 0, 1, 0.2112367527838594, 0, 1.477187158541108, 1.00507837595014, 0.7887632472161406, 1, 1.469723350822929],
-          [0.2095687534777179, 0.6535571428055017, 0, 0, 0.2428020690610256, 0, 0, 0, 1, 1, 1.469723350822929],
-          [0.2388388957665798, 0.6631419002996931, 0, 0, 0.264793770342125, 0, 0, 0, 1, 1, 1.469723350822929],
-          [0.6514041163792167, 1.372668212484988, 1, 3, 0.3218284777129224, 1.535145349646282, 2.185524493620346, 0.4606965253599324, 0.6130395254831164, 0.7884767084968367, 1.411730082978022],
-          [0.5211874549426955, 2.457641095608409, 1, 4, 0.1749638980888216, 1.918695453078298, 1.627576950575758, -0.1897009174015962, 0.7875966126559886, 0.6177347992932734, 1.534618316506306],
-          [0.5739121668212771, 2.426087833178723, 2, 6, 0.1913040556070923, 3.484853807991882, 2.473117385918647, -0.5864153991162213, 0.8157436056047684, 0.4708839739648731, 1.725289655759397],
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-          ]
-        }
-      }
-    },
-   "headers":    [
-["ES", "Expected synonymous sites"],
-    ["EN", "Expected non-synonymous sites"],
-    ["S", "Inferred synonymous substitutions"],
-    ["N", "Inferred non-synonymous substitutions"],
-    ["P[S]", "Expected proportion of synonymous sites"],
-    ["dS", "Inferred synonymous susbsitution rate"],
-    ["dN", "Inferred non-synonymous susbsitution rate"],
-    ["dN-dS", "Scaled by the length of the tested branches"],
-    ["P [dN/dS > 1]", "Binomial probability that S is no greater than the observed value, with P<sub>s</sub> probability of success"],
-    ["P [dN/dS < 1]", "Binomial probability that S is no less than the observed value, with P<sub>s</sub> probability of success"],
-    ["Total branch length", "The total length of branches contributing to inference at this site, and used to scale dN-dS"] 
-    ]
-  },
- "analysis":{
-   "authors":"Sergei L Kosakovsky Pond and Simon DW Frost",
-   "citation":"Not So Different After All: A Comparison of Methods for Detecting Amino Acid Sites Under Selection (2005). _Mol Biol Evol_ 22 (5): 1208-1222",
-   "contact":"spond@temple.edu",
-   "info":"SLAC (Single Likelihood Ancestor Counting)\n    uses a maximum likelihood ancestral state reconstruction\n    and minimum path substitution counting to estimate site - level\n    dS and dN,\n    and applies a simple binomial - based test to test\n    if dS differs drom dN.\n    The estimates aggregate information over all branches,\n    so the signal is derived from\n    pervasive diversification or conservation. A subset of branches can be selected\n    for testing as well.\n    Multiple partitions within a NEXUS file are also supported\n    for recombination - aware analysis.\n    ",
-   "requirements":"in-frame codon alignment and a phylogenetic tree",
-   "version":"2.00"
-  },
- "branch attributes":{
-   "0":{
-     "Baboon":{
-       "Global MG94xREV":0.001710698008755675,
-       "Nucleotide GTR":0.001679501710016974,
-       "amino-acid":        [
-["K", "E", "I", "R", "N", "A", "L", "E", "T", "W", "G", "A", "L", "G", "Q", "D", "I", "D", "L", "D", "I", "P", "S", "F", "Q", "M", "S", "D", "D", "I", "D", "D", "I", "K", "W", "E", "K", "T", "S", "D", "K", "K", "K", "I", "A", "Q", "F", "R", "K", "E", "K", "E", "T", "F", "E", "E", "K", "D", "A", "Y", "K", "L", "F", "K", "N", "G", "T", "L", "K", "I", "K", "H", "-", "L", "K", "I", "H", "D", "Q", "D", "S", "Y", "K", "V", "S", "I", "Y", "D", "T", "K", "G", "K", "N", "V", "L", "E", "K", "T", "F", "D", "L", "K", "I", "Q", "E", "R", "V", "S", "E", "P", "K", "I", "S", "W", "T", "C", "I", "N", "T", "T", "L", "T", "C", "E", "V", "M", "N", "G", "T", "D", "P", "E", "L", "N", "L", "Y", "Q", "D", "G", "K", "H", "L", "K", "-", "L", "S", "Q", "R", "V", "I", "T", "H", "K", "W", "T", "T", "S", "L", "S", "A", "K", "F", "K", "C", "T", "A", "G", "N", "K", "V", "S", "K", "E", "S", "R", "M", "E", "T", "V", "S", "C", "P", "E", "K", "G", "L", "D"] 
-        ],
-       "codon":        [
-["AAA", "GAG", "ATT", "AGG", "AAT", "GCT", "TTG", "GAA", "ACC", "TGG", "GGA", "GCG", "CTG", "GGT", "CAG", "GAC", "ATC", "GAC", "TTG", "GAC", "ATT", "CCT", "AGT", "TTT", "CAA", "ATG", "AGT", "GAT", "GAT", "ATT", "GAT", "GAT", "ATA", "AAA", "TGG", "GAG", "AAA", "ACT", "TCA", "GAC", "AAG", "AAA", "AAG", "ATT", "GCA", "CAA", "TTC", "AGA", "AAA", "GAG", "AAG", "GAG", "ACT", "TTC", "GAG", "GAA", "AAA", "GAT", "GCA", "TAT", "AAG", "CTA", "TTT", "AAA", "AAC", "GGA", "ACT", "CTG", "AAA", "ATT", "AAG", "CAT", "---", "CTG", "AAG", "ATC", "CAT", "GAT", "CAG", "GAT", "AGC", "TAC", "AAG", "GTA", "TCA", "ATA", "TAC", "GAT", "ACA", "AAA", "GGA", "AAA", "AAT", "GTG", "TTG", "GAA", "AAA", "ACA", "TTT", "GAT", "TTG", "AAG", "ATT", "CAA", "GAG", "AGG", "GTC", "TCA", "GAA", "CCA", "AAG", "ATC", "TCC", "TGG", "ACT", "TGT", "ATC", "AAC", "ACA", "ACC", "CTG", "ACC", "TGT", "GAA", "GTA", "ATG", "AAT", "GGA", "ACT", "GAC", "CCC", "GAA", "TTA", "AAC", "CTG", "TAT", "CAA", "GAT", "GGG", "AAA", "CAT", "CTA", "AAA", "---", "CTT", "TCT", "CAG", "AGG", "GTC", "ATC", "ACA", "CAC", "AAG", "TGG", "ACC", "ACC", "AGC", "CTG", "AGT", "GCG", "AAA", "TTC", "AAG", "TGC", "ACA", "GCA", "GGG", "AAC", "AAA", "GTC", "AGC", "AAG", "GAA", "TCC", "AGG", "ATG", "GAG", "ACT", "GTC", "AGC", "TGT", "CCA", "GAG", "AAA", "GGT", "CTG", "GAC"] 
-        ],
-       "nonsynonymous substitution count":        [
-[0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0] 
-        ],
-       "original name":"Baboon",
-       "synonymous substitution count":        [
-[0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0] 
-        ]
-      },
-     "Cat":{
-       "Global MG94xREV":0.270986057489719,
-       "Nucleotide GTR":0.2660443541848668,
-       "amino-acid":        [
-["-", "-", "-", "A", "N", "D", "D", "I", "V", "W", "G", "T", "L", "G", "Q", "D", "I", "N", "L", "D", "I", "P", "D", "S", "Q", "-", "G", "I", "N", "I", "D", "D", "I", "H", "W", "E", "K", "-", "-", "G", "K", "K", "K", "V", "A", "R", "F", "Q", "I", "S", "N", "K", "P", "K", "N", "P", "D", "E", "K", "Y", "N", "V", "S", "M", "N", "G", "T", "L", "K", "I", "K", "H", "-", "L", "M", "L", "E", "D", "C", "D", "T", "Y", "K", "V", "V", "I", "Y", "D", "K", "D", "G", "K", "N", "V", "L", "D", "K", "T", "F", "Q", "L", "K", "I", "Q", "E", "K", "V", "S", "T", "P", "N", "I", "D", "W", "N", "C", "I", "N", "K", "T", "L", "V", "C", "K", "V", "S", "N", "G", "T", "D", "P", "E", "L", "K", "L", "Y", "V", "N", "G", "T", "S", "I", "K", "P", "V", "S", "S", "K", "F", "S", "T", "Y", "R", "F", "I", "N", "K", "Q", "K", "I", "L", "V", "N", "C", "T", "A", "E", "N", "K", "V", "S", "K", "E", "S", "D", "V", "K", "M", "I", "T", "C", "S", "E", "K", "G", "L", "D"] 
-        ],
-       "codon":        [
-["---", "---", "---", "GCA", "AAT", "GAT", "GAT", "ATC", "GTC", "TGG", "GGT", "ACC", "CTG", "GGT", "CAG", "GAC", "ATC", "AAC", "CTG", "GAC", "ATT", "CCT", "GAT", "TCT", "CAA", "---", "GGG", "ATT", "AAT", "ATA", "GAT", "GAT", "ATA", "CAC", "TGG", "GAA", "AAA", "---", "---", "GGC", "AAG", "AAG", "AAG", "GTG", "GCG", "AGG", "TTC", "CAA", "ATT", "AGC", "AAC", "AAG", "CCT", "AAG", "AAT", "CCA", "GAT", "GAA", "AAA", "TAT", "AAT", "GTG", "TCA", "ATG", "AAT", "GGA", "ACT", "CTG", "AAA", "ATT", "AAA", "CAT", "---", "CTG", "ATG", "CTA", "GAA", "GAC", "TGC", "GAT", "ACC", "TAC", "AAG", "GTT", "GTT", "ATA", "TAC", "GAT", "AAG", "GAT", "GGA", "AAG", "AAT", "GTG", "TTG", "GAT", "AAA", "ACA", "TTT", "CAG", "CTG", "AAG", "ATT", "CAA", "GAG", "AAG", "GTC", "TCA", "ACG", "CCT", "AAC", "ATC", "GAC", "TGG", "AAT", "TGT", "ATC", "AAC", "AAA", "ACC", "CTG", "GTC", "TGT", "AAG", "GTA", "TCA", "AAT", "GGA", "ACA", "GAC", "CCT", "GAA", "TTA", "AAA", "CTG", "TAC", "GTA", "AAT", "GGG", "ACC", "AGT", "ATC", "AAG", "CCC", "GTT", "TCT", "TCG", "AAG", "TTC", "AGC", "ACA", "TAC", "AGG", "TTT", "ATA", "AAC", "AAG", "CAG", "AAG", "ATA", "TTA", "GTC", "AAC", "TGC", "ACG", "GCA", "GAA", "AAC", "AAA", "GTC", "AGC", "AAG", "GAA", "AGC", "GAC", "GTG", "AAG", "ATG", "ATC", "ACT", "TGT", "TCA", "GAG", "AAG", "GGT", "CTG", "GAC"] 
-        ],
-       "nonsynonymous substitution count":        [
-[0, 0, 0, 1, 0, 1, 1.5, 2, 0, 0, 0, 1, 0, 0, 1, 0, 0, 0, 0, 0, 0, 0, 0, 1, 0, 0, 1.5, 2, 0, 1, 0, 0, 0, 1, 0, 0, 0, 0, 0, 0, 0, 1, 0, 1.5, 0, 1.5, 0, 1, 1.5, 2, 1, 0, 0, 3, 1, 2, 2, 0, 1, 0, 1, 0, 1, 1.5, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, 1.5, 1, 0, 1.5, 1, 0, 0, 0, 0, 1, 1, 0, 0, 1, 0, 0, 0, 0, 0, 0, 1, 0, 0, 0, 2, 0, 0, 0, 1, 0, 1, 0, 0, 1, 0, 1, 0, 2, 0, 1, 0, 1, 0, 1, 0, 0, 2, 0, 1, 0, 1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, 0, 0, 0, 0, 0, 0, 1.5, 1, 1, 2, 0, 1, 1, 0, 0, 1, 2, 1, 1, 1, 1, 2, 2, 1, 1, 1, 0, 0, 0, 1.5, 0, 0, 0, 0, 0, 0, 0, 2, 1, 1, 1, 0, 1, 0, 1, 0, 0, 0, 0, 0] 
-        ],
-       "original name":"Cat",
-       "synonymous substitution count":        [
-[0, 0, 0, 0, 0, 0, 0.5, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0.5, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, 0, 0, 0.5, 1, 1.5, 0, 0, 0.5, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, 0, 0.5, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0.5, 0, 1, 0.5, 0, 0, 0, 0, 1, 0, 0, 1, 0, 1, 0, 0, 1, 0, 0, 0, 0, 0, 0, 0, 0, 1, 0, 0, 0, 0, 0, 0, 0, 1, 0, 0, 0, 0, 0, 1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, 0, 0, 0, 0, 0, 0, 1, 0, 0, 0, 1, 0, 0, 1, 0.5, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0.5, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, 0, 0, 0] 
-        ]
-      },
-     "Chimp":{
-       "Global MG94xREV":0.001852173963769908,
-       "Nucleotide GTR":0.001818397708700883,
-       "amino-acid":        [
-["E", "E", "I", "T", "N", "A", "L", "E", "T", "W", "G", "A", "L", "G", "Q", "D", "I", "N", "L", "D", "I", "P", "S", "F", "Q", "M", "S", "D", "D", "I", "D", "D", "I", "K", "W", "E", "K", "T", "S", "D", "K", "K", "K", "I", "A", "Q", "F", "R", "K", "E", "K", "E", "T", "F", "K", "E", "K", "D", "T", "Y", "K", "L", "F", "K", "N", "G", "T", "L", "K", "I", "K", "H", "-", "L", "K", "T", "D", "D", "Q", "D", "I", "Y", "K", "V", "S", "I", "Y", "D", "T", "K", "G", "K", "N", "V", "L", "E", "K", "I", "F", "D", "L", "K", "I", "Q", "E", "R", "V", "S", "K", "P", "K", "I", "S", "W", "T", "C", "I", "N", "T", "T", "L", "T", "C", "E", "V", "M", "N", "G", "T", "D", "P", "E", "L", "N", "L", "Y", "Q", "D", "G", "K", "H", "L", "K", "-", "L", "S", "Q", "R", "V", "I", "T", "H", "K", "W", "T", "T", "S", "L", "S", "A", "K", "F", "K", "C", "T", "A", "G", "N", "K", "V", "S", "K", "E", "S", "S", "V", "E", "P", "V", "S", "C", "P", "E", "K", "G", "L", "D"] 
-        ],
-       "codon":        [
-["GAA", "GAG", "ATT", "ACG", "AAT", "GCC", "TTG", "GAA", "ACC", "TGG", "GGT", "GCC", "TTG", "GGT", "CAG", "GAC", "ATC", "AAC", "TTG", "GAC", "ATT", "CCT", "AGT", "TTT", "CAA", "ATG", "AGT", "GAT", "GAT", "ATT", "GAC", "GAT", "ATA", "AAA", "TGG", "GAA", "AAA", "ACT", "TCA", "GAC", "AAG", "AAA", "AAG", "ATT", "GCA", "CAA", "TTC", "AGA", "AAA", "GAG", "AAA", "GAG", "ACT", "TTC", "AAG", "GAA", "AAA", "GAT", "ACA", "TAT", "AAG", "CTA", "TTT", "AAA", "AAT", "GGA", "ACT", "CTG", "AAA", "ATT", "AAG", "CAT", "---", "CTG", "AAG", "ACC", "GAT", "GAT", "CAG", "GAT", "ATC", "TAC", "AAG", "GTA", "TCA", "ATA", "TAT", "GAT", "ACA", "AAA", "GGA", "AAA", "AAT", "GTG", "TTG", "GAA", "AAA", "ATA", "TTT", "GAT", "TTG", "AAG", "ATT", "CAA", "GAG", "AGG", "GTC", "TCA", "AAA", "CCA", "AAG", "ATC", "TCC", "TGG", "ACT", "TGT", "ATC", "AAC", "ACA", "ACC", "CTG", "ACC", "TGT", "GAG", "GTA", "ATG", "AAT", "GGA", "ACT", "GAC", "CCC", "GAA", "TTA", "AAC", "CTG", "TAT", "CAA", "GAT", "GGG", "AAA", "CAT", "CTA", "AAA", "---", "CTT", "TCT", "CAG", "AGG", "GTC", "ATC", "ACA", "CAC", "AAG", "TGG", "ACC", "ACC", "AGC", "CTG", "AGT", "GCA", "AAA", "TTC", "AAG", "TGC", "ACA", "GCA", "GGG", "AAC", "AAA", "GTC", "AGC", "AAG", "GAA", "TCC", "AGT", "GTC", "GAG", "CCT", "GTC", "AGC", "TGT", "CCA", "GAG", "AAA", "GGT", "CTG", "GAC"] 
-        ],
-       "nonsynonymous substitution count":        [
-[1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0] 
-        ],
-       "original name":"Chimp",
-       "synonymous substitution count":        [
-[0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0] 
-        ]
-      },
-     "Cow":{
-       "Global MG94xREV":0.2526189686412594,
-       "Nucleotide GTR":0.2480122076744146,
-       "amino-acid":        [
-["-", "-", "-", "-", "E", "S", "I", "V", "V", "W", "G", "A", "L", "D", "H", "D", "L", "N", "L", "D", "I", "P", "G", "F", "P", "R", "S", "D", "I", "V", "A", "D", "I", "K", "W", "N", "R", "-", "-", "N", "K", "N", "K", "I", "A", "R", "I", "K", "K", "D", "M", "P", "L", "H", "N", "E", "M", "D", "K", "Y", "D", "M", "F", "T", "N", "G", "T", "L", "K", "I", "K", "T", "-", "L", "M", "R", "N", "D", "S", "G", "L", "Y", "E", "V", "E", "V", "Y", "D", "S", "N", "G", "V", "N", "L", "L", "S", "K", "K", "F", "D", "L", "K", "I", "Q", "E", "M", "L", "S", "G", "P", "E", "I", "N", "W", "I", "C", "T", "N", "R", "T", "V", "S", "C", "K", "V", "E", "N", "G", "S", "N", "P", "K", "L", "Q", "L", "F", "L", "N", "T", "T", "R", "V", "K", "Q", "D", "H", "G", "K", "L", "I", "T", "Y", "T", "W", "N", "T", "R", "W", "N", "K", "T", "F", "K", "C", "V", "A", "S", "N", "H", "V", "D", "S", "K", "V", "S", "I", "E", "I", "A", "V", "C", "P", "D", "E", "G", "L", "D"] 
-        ],
-       "codon":        [
-["---", "---", "---", "---", "GAA", "AGC", "ATT", "GTC", "GTC", "TGG", "GGT", "GCC", "CTG", "GAT", "CAT", "GAC", "CTC", "AAC", "CTG", "GAC", "ATT", "CCT", "GGT", "TTT", "CCA", "AGA", "AGT", "GAT", "ATA", "GTG", "GCA", "GAT", "ATA", "AAA", "TGG", "AAC", "AGA", "---", "---", "AAC", "AAA", "AAC", "AAG", "ATT", "GCA", "CGA", "ATA", "AAG", "AAA", "GAT", "ATG", "CCA", "CTT", "CAC", "AAT", "GAA", "ATG", "GAC", "AAA", "TAT", "GAT", "ATG", "TTT", "ACA", "AAT", "GGA", "ACT", "CTG", "AAA", "ATT", "AAA", "ACT", "---", "CTG", "ATG", "AGA", "AAC", "GAT", "AGT", "GGT", "CTC", "TAT", "GAG", "GTA", "GAG", "GTT", "TAT", "GAT", "TCA", "AAT", "GGA", "GTA", "AAC", "CTA", "CTG", "AGC", "AAA", "AAA", "TTT", "GAT", "TTG", "AAG", "ATT", "CAA", "GAG", "ATG", "CTC", "TCA", "GGA", "CCT", "GAA", "ATT", "AAC", "TGG", "ATC", "TGT", "ACC", "AAC", "AGA", "ACT", "GTG", "AGC", "TGC", "AAG", "GTA", "GAA", "AAT", "GGA", "AGT", "AAT", "CCT", "AAA", "TTA", "CAA", "CTG", "TTT", "TTA", "AAT", "ACG", "ACC", "CGT", "GTC", "AAA", "CAA", "GAT", "CAT", "GGG", "AAG", "CTC", "ATC", "ACC", "TAC", "ACG", "TGG", "AAC", "ACC", "AGA", "TGG", "AAT", "AAA", "ACA", "TTC", "AAG", "TGC", "GTG", "GCG", "AGT", "AAC", "CAT", "GTC", "GAT", "AGC", "AAA", "GTC", "AGC", "ATA", "GAG", "ATC", "GCC", "GTG", "TGT", "CCA", "GAT", "GAA", "GGT", "CTG", "GAT"] 
-        ],
-       "nonsynonymous substitution count":        [
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-       "original name":"Cow",
-       "synonymous substitution count":        [
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-       "Nucleotide GTR":0.209015715622236,
-       "amino-acid":        [
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-        ],
-       "nonsynonymous substitution count":        [
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-       "original name":"Horse",
-       "synonymous substitution count":        [
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-        ]
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-       "Nucleotide GTR":0,
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-       "nonsynonymous substitution count":        [
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-       "original name":"Human",
-       "synonymous substitution count":        [
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-       "Nucleotide GTR":0.1180997886803625,
-       "amino-acid":        [
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-       "codon":        [
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-       "nonsynonymous substitution count":        [
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-       "original name":"Mouse",
-       "synonymous substitution count":        [
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-       "Nucleotide GTR":0.2768482204901319,
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-        ],
-       "codon":        [
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-        ],
-       "nonsynonymous substitution count":        [
-[0, 0, 0, 0, 0, 0, 0, 1, 0, 0, 0, 0, 0, 1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, 1.5, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 2, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 2, 1, 0, 0, 1, 0, 0, 0, 1.5, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, 0, 0, 0, 0, 0, 0, 0, 1, 0, 1, 0, 0, 0, 0, 1, 0, 0, 1, 0, 0, 1, 0, 0, 0, 0, 0, 0, 1, 0, 0, 1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, 0, 1, 1, 0, 1, 0, 0, 0, 0, 2, 0, 1, 0, 1, 0, 0, 0, 0, 1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0] 
-        ],
-       "synonymous substitution count":        [
-[0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0.5, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0.5, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, 0, 0, 0, 0, 0, 0, 1, 0, 1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1] 
-        ]
-      },
-     "Node8":{
-       "Global MG94xREV":0.1081901197733327,
-       "Nucleotide GTR":0.106217164126135,
-       "amino-acid":        [
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-        ],
-       "codon":        [
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-        ],
-       "nonsynonymous substitution count":        [
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-        ],
-       "synonymous substitution count":        [
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-        ]
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-     "Node9":{
-       "Global MG94xREV":0.0261290773391622,
-       "Nucleotide GTR":0.02565258733434138,
-       "amino-acid":        [
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-        ],
-       "codon":        [
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-        ],
-       "nonsynonymous substitution count":        [
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-        ],
-       "synonymous substitution count":        [
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-        ]
-      },
-     "Pig":{
-       "Global MG94xREV":0.190671339253091,
-       "Nucleotide GTR":0.1871942556124935,
-       "amino-acid":        [
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-        ],
-       "codon":        [
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-        ],
-       "nonsynonymous substitution count":        [
-[0, 0, 0, 0, 0, 1, 1, 0, 0, 0, 0, 2, 1, 0, 1, 0, 0, 0, 0, 0, 0, 0, 1, 1, 1, 0, 2, 0, 0, 0, 0, 1, 0, 1, 0, 1, 0, 0, 0, 0, 1, 0, 0, 0, 0, 1, 0, 0, 0, 1, 0, 1, 1, 0, 2, 1, 0, 0, 0, 0, 1, 0, 0, 1, 0, 0, 0, 0, 1, 0, 0, 1, 0, 0, 0, 0, 0, 0, 1, 0, 0, 0, 0, 0, 1, 0, 0, 1, 0, 0, 0, 0, 1, 1, 0, 0, 1, 0, 0, 0, 0, 2, 0, 0, 1, 1, 0, 0, 0, 0, 1, 0, 0, 0, 0, 0, 1, 1, 0, 0, 0, 0, 0, 0, 0, 0, 2, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, 0, 1, 1, 1, 1, 1, 1, 0, 1, 0, 0, 0, 0, 2.166666666666667, 2, 0, 0, 0, 0, 0, 0, 0, 0, 1, 0, 0, 0, 0, 0, 0, 0, 0, 1, 0, 1, 1, 0, 0, 0, 1, 1, 0, 0, 0, 1, 1, 1, 0, 0, 0] 
-        ],
-       "original name":"Pig",
-       "synonymous substitution count":        [
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-       "amino-acid":        [
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-       "codon":        [
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-       "nonsynonymous substitution count":        [
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-       "original name":"Rat",
-       "synonymous substitution count":        [
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-       "nonsynonymous substitution count":        [
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-       "original name":"RhMonkey",
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-     "Nucleotide GTR":{
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-     "amino-acid":{
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-     "codon":{
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-     "nonsynonymous substitution count":{
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-     "original name":{
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-     "synonymous substitution count":{
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-     "coverage":      [
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-     "name":"slac.filter.default"
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-     "Log Likelihood":-3467.333825435224,
-     "Rate Distributions":{
-       "non-synonymous/synonymous rate ratio for *test*":        [
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-     "display order":1,
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-   "Nucleotide GTR":{
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-     "Rate Distributions":{
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-       "Substitution rate from nucleotide A to nucleotide G":1,
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-   "number of sequences":10,
-   "number of sites":187,
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-      [0.7091213139350294, 2.274638964597825, 1.833333333333333, 7.75, 0.238208072130221, 2.345533252336273, 3.410881111431381, 0.558113953217533, 0.5094497004116185, 0.7608688179374264, 1.725289655759397],
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-      [1, 2, 0, 1, 0.3333333333333333, 0, 0.4999999999999999, 0.2898064092199763, 0.6666666666666667, 1, 1.725289655759397],
-      [0.459387925258634, 2.540612074741366, 1, 2, 0.1531293084195447, 2.176809500243183, 0.7872118769661439, -0.8054285949250646, 0.9368355759475115, 0.3926328355868177, 1.725289655759397],
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-      [1, 1.954150177116668, 1, 3, 0.3385068260057204, 0.9999999999999998, 1.535194190871489, 0.3102054133837139, 0.5833958240116991, 0.8085296778030449, 1.725289655759397],
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-      [1, 2, 0, 0, 0.3333333333333333, 0, 0, 0, 1, 1, 1.725289655759397],
-      [1.416174943672039, 1.583825056327961, 0, 0, 0.4720583145573463, 0, 0, 0, 1, 1, 1.725289655759397],
-      [0.566048512190645, 2.41804757094315, 2, 3, 0.1896884337572, 3.533266066295039, 1.240670380537576, -1.333516642795554, 0.9504034442939914, 0.2397204872545077, 1.725289655759397] 
-      ]
-    }
-  },
- "tested":{
-   "0":{
-     "Baboon":"test",
-     "Cat":"test",
-     "Chimp":"test",
-     "Cow":"test",
-     "Horse":"test",
-     "Human":"test",
-     "Mouse":"test",
-     "Node1":"test",
-     "Node12":"test",
-     "Node2":"test",
-     "Node3":"test",
-     "Node8":"test",
-     "Node9":"test",
-     "Pig":"test",
-     "Rat":"test",
-     "RhMonkey":"test"
-    }
-  },
- "timers":{
-   "Ancestor sampling analysis":{
-     "order":3,
-     "timer":12
-    },
-   "Model fitting":{
-     "order":1,
-     "timer":1
-    },
-   "Primary SLAC analysis":{
-     "order":2,
-     "timer":1
-    },
-   "Total time":{
-     "order":0,
-     "timer":14
-    }
-  }
-}
\ No newline at end of file