Mercurial > repos > iuc > hyphy_fubar

comparison test-data/summary/ORF6.MEME-full.json @ 27:8741542f9bc8 draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
author iuc
date Wed, 09 Jun 2021 07:07:10 +0000
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26:cd41e7a4d35f 27:8741542f9bc8
1 {
2 "MLE":{
3 "content":{
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66 ]
67 },
68 "headers": [
69 ["alpha;", "Synonymous substitution rate at a site"],
70 ["&beta;<sup>-</sup>", "Non-synonymous substitution rate at a site for the negative/neutral evolution component"],
71 ["p<sup>-</sup>", "Mixture distribution weight allocated to &beta;<sup>-</sup>; loosely -- the proportion of the tree evolving neutrally or under negative selection"],
72 ["&beta;<sup>+</sup>", "Non-synonymous substitution rate at a site for the positive/neutral evolution component"],
73 ["p<sup>+</sup>", "Mixture distribution weight allocated to &beta;<sup>+</sup>; loosely -- the proportion of the tree evolving neutrally or under positive selection"],
74 ["LRT", "Likelihood ratio test statistic for episodic diversification, i.e., p<sup>+</sup> &gt; 0 <emph>and<emph> &beta;<sup>+</sup> &gt; &alpha;"],
75 ["p-value", "Asymptotic p-value for episodic diversification, i.e., p<sup>+</sup> &gt; 0 <emph>and<emph> &beta;<sup>+</sup> &gt; &alpha;"],
76 ["# branches under selection", "The (very approximate and rough) estimate of how many branches may have been under selection at this site, i.e., had an empirical Bayes factor of 100 or more for the &beta;<sup>+</sup> rate"],
77 ["Total branch length", "The total length of branches contributing to inference at this site, and used to scale dN-dS"],
78 ["MEME LogL", "Site Log-likelihood under the MEME model"],
79 ["FEL LogL", "Site Log-likelihood under the FEL model"]
80 ]
81 },
82 "analysis":{
83 "authors":"Sergei L. Kosakovsky Pond, Steven Weaver",
84 "citation":"Detecting Individual Sites Subject to Episodic Diversifying Selection. _PLoS Genet_ 8(7): e1002764.",
85 "contact":"spond@temple.edu",
86 "info":"MEME (Mixed Effects Model of Evolution)\n estimates a site-wise synonymous (&alpha;) and a two-category mixture of non-synonymous\n (&beta;-, with proportion p-, and &beta;+ with proportion [1-p-]) rates, and\n uses a likelihood ratio test to determine if &beta;+ > &alpha; at a site.\n The estimates aggregate information over a proportion of branches at a site,\n so the signal is derived from\n episodic diversification, which is a combination of strength of selection [effect size] and\n the proportion of the tree affected. A subset of branches can be selected\n for testing as well, in which case an additional (nuisance) parameter will be\n inferred -- the non-synonymous rate on branches NOT selected for testing. Multiple partitions within a NEXUS file are also supported\n for recombination - aware analysis.\n ",
87 "requirements":"in-frame codon alignment and a phylogenetic tree",
88 "version":"2.1.2"
89 },
90 "branch attributes":{
91 "0":{
92 "Node100":{
93 "Global MG94xREV":0.005595771389995104,
94 "Nucleotide GTR":0.005480709230504446
95 },
96 "Node112":{
97 "Global MG94xREV":0.005601039668885619,
98 "Nucleotide GTR":0.005479616709115599
99 },
100 "Node115":{
101 "Global MG94xREV":0.005593919439547744,
102 "Nucleotide GTR":0.0054731375250642
103 },
104 "Node119":{
105 "Global MG94xREV":0.00560632712449723,
106 "Nucleotide GTR":0.00547792745634657
107 },
108 "Node172":{
109 "Global MG94xREV":0.005628805315829838,
110 "Nucleotide GTR":0.005503005696410831
111 },
112 "Node177":{
113 "Global MG94xREV":0.005582953695602026,
114 "Nucleotide GTR":0.005475013711016215
115 },
116 "Node184":{
117 "Global MG94xREV":0.005597986108256508,
118 "Nucleotide GTR":0.005474986566233221
119 },
120 "Node194":{
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122 "Nucleotide GTR":0.005498938135253649
123 },
124 "Node198":{
125 "Global MG94xREV":0.005634884025943302,
126 "Nucleotide GTR":0.005501809093221373
127 },
128 "Node201":{
129 "Global MG94xREV":0.005588355805518057,
130 "Nucleotide GTR":0.005472956903151315
131 },
132 "Node206":{
133 "Global MG94xREV":0.005633043010542594,
134 "Nucleotide GTR":0.005501897571553138
135 },
136 "Node22":{
137 "Global MG94xREV":0.00559543975008409,
138 "Nucleotide GTR":0.005478062261613842
139 },
140 "Node226":{
141 "Global MG94xREV":0.005594745879060948,
142 "Nucleotide GTR":0.005477381989095749
143 },
144 "Node23":{
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146 "Nucleotide GTR":0.005488116513150291
147 },
148 "Node230":{
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155 },
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236 "REFERENCE":{
237 "Global MG94xREV":0,
238 "Nucleotide GTR":0,
239 "original name":"REFERENCE"
240 },
241 "epi_isl_1181694_hCoV_19_USA_DE_DHSS_B1064373_2021":{
242 "EBF site 1 (partition 1)":1,
243 "EBF site 10 (partition 1)":1,
244 "EBF site 11 (partition 1)":1,
245 "EBF site 12 (partition 1)":1,
246 "EBF site 13 (partition 1)":1,
247 "EBF site 14 (partition 1)":1,
248 "EBF site 15 (partition 1)":1,
249 "EBF site 16 (partition 1)":1,
250 "EBF site 17 (partition 1)":1,
251 "EBF site 18 (partition 1)":1,
252 "EBF site 19 (partition 1)":1,
253 "EBF site 2 (partition 1)":1,
254 "EBF site 20 (partition 1)":0.9999999949752406,
255 "EBF site 21 (partition 1)":1,
256 "EBF site 22 (partition 1)":1,
257 "EBF site 24 (partition 1)":0.9999999949752406,
258 "EBF site 25 (partition 1)":1,
259 "EBF site 26 (partition 1)":1,
260 "EBF site 27 (partition 1)":1,
261 "EBF site 28 (partition 1)":1,
262 "EBF site 29 (partition 1)":1,
263 "EBF site 3 (partition 1)":1,
264 "EBF site 30 (partition 1)":1,
265 "EBF site 31 (partition 1)":1,
266 "EBF site 32 (partition 1)":1,
267 "EBF site 33 (partition 1)":1,
268 "EBF site 34 (partition 1)":1,
269 "EBF site 35 (partition 1)":1,
270 "EBF site 36 (partition 1)":1,
271 "EBF site 37 (partition 1)":1,
272 "EBF site 38 (partition 1)":1,
273 "EBF site 39 (partition 1)":1,
274 "EBF site 4 (partition 1)":1,
275 "EBF site 40 (partition 1)":1,
276 "EBF site 41 (partition 1)":1,
277 "EBF site 42 (partition 1)":1,
278 "EBF site 43 (partition 1)":1,
279 "EBF site 44 (partition 1)":1,
280 "EBF site 45 (partition 1)":1,
281 "EBF site 46 (partition 1)":1,
282 "EBF site 47 (partition 1)":1,
283 "EBF site 48 (partition 1)":1,
284 "EBF site 49 (partition 1)":1,
285 "EBF site 5 (partition 1)":1,
286 "EBF site 50 (partition 1)":1,
287 "EBF site 51 (partition 1)":1,
288 "EBF site 52 (partition 1)":1,
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298 "EBF site 61 (partition 1)":0.9999999949752406,
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300 "EBF site 8 (partition 1)":0.9999999999999991,
301 "EBF site 9 (partition 1)":1,
302 "Global MG94xREV":0,
303 "Nucleotide GTR":0,
304 "original name":"epi_isl_1181694/hCoV-19/USA/DE-DHSS-B1064373/2021"
305 },
306 "epi_isl_1284652_hCoV_19_Germany_SN_RKI_I_038291_2021":{
307 "EBF site 1 (partition 1)":1,
308 "EBF site 10 (partition 1)":1,
309 "EBF site 11 (partition 1)":1,
310 "EBF site 12 (partition 1)":1,
311 "EBF site 13 (partition 1)":1,
312 "EBF site 14 (partition 1)":1,
313 "EBF site 15 (partition 1)":1,
314 "EBF site 16 (partition 1)":1,
315 "EBF site 17 (partition 1)":1,
316 "EBF site 18 (partition 1)":1,
317 "EBF site 19 (partition 1)":1,
318 "EBF site 2 (partition 1)":1,
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320 "EBF site 21 (partition 1)":1,
321 "EBF site 22 (partition 1)":1,
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323 "EBF site 25 (partition 1)":1,
324 "EBF site 26 (partition 1)":1,
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326 "EBF site 28 (partition 1)":1,
327 "EBF site 29 (partition 1)":1,
328 "EBF site 3 (partition 1)":1,
329 "EBF site 30 (partition 1)":1,
330 "EBF site 31 (partition 1)":1,
331 "EBF site 32 (partition 1)":1,
332 "EBF site 33 (partition 1)":1,
333 "EBF site 34 (partition 1)":1,
334 "EBF site 35 (partition 1)":1,
335 "EBF site 36 (partition 1)":1,
336 "EBF site 37 (partition 1)":1,
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339 "EBF site 4 (partition 1)":1,
340 "EBF site 40 (partition 1)":1,
341 "EBF site 41 (partition 1)":1,
342 "EBF site 42 (partition 1)":1,
343 "EBF site 43 (partition 1)":1,
344 "EBF site 44 (partition 1)":1,
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358 "EBF site 57 (partition 1)":1,
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363 "EBF site 61 (partition 1)":0.9999999949752406,
364 "EBF site 7 (partition 1)":1,
365 "EBF site 8 (partition 1)":0.9999999999999991,
366 "EBF site 9 (partition 1)":1,
367 "Global MG94xREV":0,
368 "Nucleotide GTR":0,
369 "original name":"epi_isl_1284652/hCoV-19/Germany/SN-RKI-I-038291/2021"
370 },
371 "epi_isl_1442952_hCoV_19_Singapore_321_2021":{
372 "EBF site 1 (partition 1)":1,
373 "EBF site 10 (partition 1)":1,
374 "EBF site 11 (partition 1)":1,
375 "EBF site 12 (partition 1)":1,
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380 "EBF site 17 (partition 1)":1,
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430 "EBF site 8 (partition 1)":0.8943371363028002,
431 "EBF site 9 (partition 1)":1,
432 "Global MG94xREV":0.00553488916724749,
433 "Nucleotide GTR":0.00546921831544746,
434 "original name":"epi_isl_1442952/hCoV-19/Singapore/321/2021"
435 },
436 "epi_isl_1470937_hCoV_19_USA_NY_PRL_2021_03_29_01C17_2021":{
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438 "EBF site 10 (partition 1)":1,
439 "EBF site 11 (partition 1)":1,
440 "EBF site 12 (partition 1)":1,
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445 "EBF site 17 (partition 1)":1,
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447 "EBF site 19 (partition 1)":1,
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451 "EBF site 22 (partition 1)":1,
452 "EBF site 24 (partition 1)":0.9999999949752406,
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455 "EBF site 27 (partition 1)":1,
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458 "EBF site 3 (partition 1)":1,
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460 "EBF site 31 (partition 1)":1,
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468 "EBF site 39 (partition 1)":1,
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494 "EBF site 7 (partition 1)":1,
495 "EBF site 8 (partition 1)":0.9999999999999991,
496 "EBF site 9 (partition 1)":1,
497 "Global MG94xREV":0,
498 "Nucleotide GTR":0,
499 "original name":"epi_isl_1470937/hCoV-19/USA/NY-PRL-2021_03_29_01C17/2021"
500 },
501 "epi_isl_1512225_hCoV_19_USA_GA_CDC_STM_000041012_2021":{
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503 "EBF site 10 (partition 1)":1,
504 "EBF site 11 (partition 1)":1,
505 "EBF site 12 (partition 1)":1,
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510 "EBF site 17 (partition 1)":1,
511 "EBF site 18 (partition 1)":1,
512 "EBF site 19 (partition 1)":1,
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517 "EBF site 24 (partition 1)":0.8895065117312027,
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528 "EBF site 34 (partition 1)":1,
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530 "EBF site 36 (partition 1)":1,
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537 "EBF site 42 (partition 1)":1,
538 "EBF site 43 (partition 1)":1,
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547 "EBF site 51 (partition 1)":1,
548 "EBF site 52 (partition 1)":1,
549 "EBF site 53 (partition 1)":1,
550 "EBF site 54 (partition 1)":1,
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553 "EBF site 57 (partition 1)":0.7986850585433725,
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556 "EBF site 6 (partition 1)":0.8945924492155995,
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558 "EBF site 61 (partition 1)":0.8922331808168864,
559 "EBF site 7 (partition 1)":1,
560 "EBF site 8 (partition 1)":0.8937678138750423,
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562 "Global MG94xREV":0.005566795318472669,
563 "Nucleotide GTR":0.005503965503765864,
564 "original name":"epi_isl_1512225/hCoV-19/USA/GA-CDC-STM-000041012/2021"
565 },
566 "epi_isl_1516887_hCoV_19_Australia_QLD1826_2021":{
567 "EBF site 1 (partition 1)":1,
568 "EBF site 10 (partition 1)":1,
569 "EBF site 11 (partition 1)":1,
570 "EBF site 12 (partition 1)":1,
571 "EBF site 13 (partition 1)":1,
572 "EBF site 14 (partition 1)":1,
573 "EBF site 15 (partition 1)":1,
574 "EBF site 16 (partition 1)":1,
575 "EBF site 17 (partition 1)":1,
576 "EBF site 18 (partition 1)":1,
577 "EBF site 19 (partition 1)":1,
578 "EBF site 2 (partition 1)":1,
579 "EBF site 20 (partition 1)":0.7917775131592643,
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588 "EBF site 3 (partition 1)":1,
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617 "EBF site 56 (partition 1)":1,
618 "EBF site 57 (partition 1)":0.7990496995358782,
619 "EBF site 58 (partition 1)":1,
620 "EBF site 59 (partition 1)":1,
621 "EBF site 6 (partition 1)":0.8947963102057936,
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623 "EBF site 61 (partition 1)":0.892440645428014,
624 "EBF site 7 (partition 1)":1,
625 "EBF site 8 (partition 1)":1e+26,
626 "EBF site 9 (partition 1)":1,
627 "Global MG94xREV":0.005555298511512746,
628 "Nucleotide GTR":0.005498039815669468,
629 "original name":"epi_isl_1516887/hCoV-19/Australia/QLD1826/2021"
630 },
631 "epi_isl_1533793_hCoV_19_India_MH_NCCS_CHN21027888_2021":{
632 "EBF site 1 (partition 1)":1,
633 "EBF site 10 (partition 1)":1,
634 "EBF site 11 (partition 1)":1,
635 "EBF site 12 (partition 1)":1,
636 "EBF site 13 (partition 1)":1,
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638 "EBF site 15 (partition 1)":1,
639 "EBF site 16 (partition 1)":1,
640 "EBF site 17 (partition 1)":1,
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642 "EBF site 19 (partition 1)":1,
643 "EBF site 2 (partition 1)":1,
644 "EBF site 20 (partition 1)":0.6291705473788498,
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646 "EBF site 22 (partition 1)":1,
647 "EBF site 24 (partition 1)":0.79442293316179,
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650 "EBF site 27 (partition 1)":1,
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652 "EBF site 29 (partition 1)":1,
653 "EBF site 3 (partition 1)":1,
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655 "EBF site 31 (partition 1)":1,
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663 "EBF site 39 (partition 1)":1,
664 "EBF site 4 (partition 1)":1,
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678 "EBF site 52 (partition 1)":1,
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680 "EBF site 54 (partition 1)":1,
681 "EBF site 55 (partition 1)":1,
682 "EBF site 56 (partition 1)":1,
683 "EBF site 57 (partition 1)":0.6428154940083556,
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688 "EBF site 61 (partition 1)":57.84781194229306,
689 "EBF site 7 (partition 1)":1,
690 "EBF site 8 (partition 1)":0.8006716128313811,
691 "EBF site 9 (partition 1)":1,
692 "Global MG94xREV":0.01113813594378592,
693 "Nucleotide GTR":0.0110000847666501,
694 "original name":"epi_isl_1533793/hCoV-19/India/MH-NCCS-CHN21027888/2021"
695 },
696 "epi_isl_1533799_hCoV_19_India_MH_NCCS_9947_2021":{
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698 "EBF site 10 (partition 1)":1,
699 "EBF site 11 (partition 1)":1,
700 "EBF site 12 (partition 1)":1,
701 "EBF site 13 (partition 1)":1,
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707 "EBF site 19 (partition 1)":1,
708 "EBF site 2 (partition 1)":1,
709 "EBF site 20 (partition 1)":0.7923190323921318,
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711 "EBF site 22 (partition 1)":1,
712 "EBF site 24 (partition 1)":0.8900199531805481,
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715 "EBF site 27 (partition 1)":1,
716 "EBF site 28 (partition 1)":1,
717 "EBF site 29 (partition 1)":1,
718 "EBF site 3 (partition 1)":1,
719 "EBF site 30 (partition 1)":1,
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722 "EBF site 33 (partition 1)":1,
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725 "EBF site 36 (partition 1)":1,
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727 "EBF site 38 (partition 1)":1,
728 "EBF site 39 (partition 1)":1,
729 "EBF site 4 (partition 1)":1,
730 "EBF site 40 (partition 1)":1,
731 "EBF site 41 (partition 1)":1,
732 "EBF site 42 (partition 1)":1,
733 "EBF site 43 (partition 1)":1,
734 "EBF site 44 (partition 1)":1,
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745 "EBF site 54 (partition 1)":1,
746 "EBF site 55 (partition 1)":1,
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748 "EBF site 57 (partition 1)":0.7995712142761719,
749 "EBF site 58 (partition 1)":1,
750 "EBF site 59 (partition 1)":1,
751 "EBF site 6 (partition 1)":0.8950877636829533,
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753 "EBF site 61 (partition 1)":0.8927372730260545,
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755 "EBF site 8 (partition 1)":0.8942661479865357,
756 "EBF site 9 (partition 1)":1,
757 "Global MG94xREV":0.005538866193038189,
758 "Nucleotide GTR":0.005476577087719768,
759 "original name":"epi_isl_1533799/hCoV-19/India/MH-NCCS-9947/2021"
760 },
761 "epi_isl_1543980_hCoV_19_Singapore_490_2021":{
762 "EBF site 1 (partition 1)":1,
763 "EBF site 10 (partition 1)":1,
764 "EBF site 11 (partition 1)":1,
765 "EBF site 12 (partition 1)":1,
766 "EBF site 13 (partition 1)":1,
767 "EBF site 14 (partition 1)":1,
768 "EBF site 15 (partition 1)":1,
769 "EBF site 16 (partition 1)":1,
770 "EBF site 17 (partition 1)":1,
771 "EBF site 18 (partition 1)":1,
772 "EBF site 19 (partition 1)":1,
773 "EBF site 2 (partition 1)":1,
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775 "EBF site 21 (partition 1)":1,
776 "EBF site 22 (partition 1)":1,
777 "EBF site 24 (partition 1)":0.9999999949752406,
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779 "EBF site 26 (partition 1)":1,
780 "EBF site 27 (partition 1)":1,
781 "EBF site 28 (partition 1)":1,
782 "EBF site 29 (partition 1)":1,
783 "EBF site 3 (partition 1)":1,
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785 "EBF site 31 (partition 1)":1,
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790 "EBF site 36 (partition 1)":1,
791 "EBF site 37 (partition 1)":1,
792 "EBF site 38 (partition 1)":1,
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799 "EBF site 44 (partition 1)":1,
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807 "EBF site 51 (partition 1)":1,
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810 "EBF site 54 (partition 1)":1,
811 "EBF site 55 (partition 1)":1,
812 "EBF site 56 (partition 1)":1,
813 "EBF site 57 (partition 1)":1,
814 "EBF site 58 (partition 1)":1,
815 "EBF site 59 (partition 1)":1,
816 "EBF site 6 (partition 1)":0.9999999949752406,
817 "EBF site 60 (partition 1)":1,
818 "EBF site 61 (partition 1)":0.9999999949752406,
819 "EBF site 7 (partition 1)":1,
820 "EBF site 8 (partition 1)":0.9999999999999991,
821 "EBF site 9 (partition 1)":1,
822 "Global MG94xREV":0,
823 "Nucleotide GTR":0,
824 "original name":"epi_isl_1543980/hCoV-19/Singapore/490/2021"
825 },
826 "epi_isl_1589923_hCoV_19_India_WB_1930300571091_2021":{
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828 "EBF site 10 (partition 1)":1,
829 "EBF site 11 (partition 1)":1,
830 "EBF site 12 (partition 1)":1,
831 "EBF site 13 (partition 1)":1,
832 "EBF site 14 (partition 1)":1,
833 "EBF site 15 (partition 1)":1,
834 "EBF site 16 (partition 1)":1,
835 "EBF site 17 (partition 1)":1,
836 "EBF site 18 (partition 1)":1,
837 "EBF site 19 (partition 1)":1,
838 "EBF site 2 (partition 1)":1,
839 "EBF site 20 (partition 1)":143.5574973412974,
840 "EBF site 21 (partition 1)":1,
841 "EBF site 22 (partition 1)":1,
842 "EBF site 24 (partition 1)":0.8891134287605834,
843 "EBF site 25 (partition 1)":1,
844 "EBF site 26 (partition 1)":1,
845 "EBF site 27 (partition 1)":1,
846 "EBF site 28 (partition 1)":1,
847 "EBF site 29 (partition 1)":1,
848 "EBF site 3 (partition 1)":1,
849 "EBF site 30 (partition 1)":1,
850 "EBF site 31 (partition 1)":1,
851 "EBF site 32 (partition 1)":1,
852 "EBF site 33 (partition 1)":1,
853 "EBF site 34 (partition 1)":1,
854 "EBF site 35 (partition 1)":1,
855 "EBF site 36 (partition 1)":1,
856 "EBF site 37 (partition 1)":1,
857 "EBF site 38 (partition 1)":1,
858 "EBF site 39 (partition 1)":1,
859 "EBF site 4 (partition 1)":1,
860 "EBF site 40 (partition 1)":1,
861 "EBF site 41 (partition 1)":1,
862 "EBF site 42 (partition 1)":1,
863 "EBF site 43 (partition 1)":1,
864 "EBF site 44 (partition 1)":1,
865 "EBF site 45 (partition 1)":1,
866 "EBF site 46 (partition 1)":1,
867 "EBF site 47 (partition 1)":1,
868 "EBF site 48 (partition 1)":1,
869 "EBF site 49 (partition 1)":1,
870 "EBF site 5 (partition 1)":1,
871 "EBF site 50 (partition 1)":1,
872 "EBF site 51 (partition 1)":1,
873 "EBF site 52 (partition 1)":1,
874 "EBF site 53 (partition 1)":1,
875 "EBF site 54 (partition 1)":1,
876 "EBF site 55 (partition 1)":1,
877 "EBF site 56 (partition 1)":1,
878 "EBF site 57 (partition 1)":0.7980069753246345,
879 "EBF site 58 (partition 1)":1,
880 "EBF site 59 (partition 1)":1,
881 "EBF site 6 (partition 1)":0.8942132176984796,
882 "EBF site 60 (partition 1)":1,
883 "EBF site 61 (partition 1)":0.8918472482554552,
884 "EBF site 7 (partition 1)":1,
885 "EBF site 8 (partition 1)":0.8933862811544688,
886 "EBF site 9 (partition 1)":1,
887 "Global MG94xREV":0.005588190889382373,
888 "Nucleotide GTR":0.005503865773038113,
889 "original name":"epi_isl_1589923/hCoV-19/India/WB-1930300571091/2021"
890 },
891 "epi_isl_1589926_hCoV_19_India_WB_1930300586246_2021":{
892 "EBF site 1 (partition 1)":1,
893 "EBF site 10 (partition 1)":1,
894 "EBF site 11 (partition 1)":1,
895 "EBF site 12 (partition 1)":1,
896 "EBF site 13 (partition 1)":1,
897 "EBF site 14 (partition 1)":1,
898 "EBF site 15 (partition 1)":1,
899 "EBF site 16 (partition 1)":1,
900 "EBF site 17 (partition 1)":1,
901 "EBF site 18 (partition 1)":1,
902 "EBF site 19 (partition 1)":1,
903 "EBF site 2 (partition 1)":1,
904 "EBF site 20 (partition 1)":0.7913406033312775,
905 "EBF site 21 (partition 1)":1,
906 "EBF site 22 (partition 1)":1,
907 "EBF site 24 (partition 1)":1e+26,
908 "EBF site 25 (partition 1)":1,
909 "EBF site 26 (partition 1)":1,
910 "EBF site 27 (partition 1)":1,
911 "EBF site 28 (partition 1)":1,
912 "EBF site 29 (partition 1)":1,
913 "EBF site 3 (partition 1)":1,
914 "EBF site 30 (partition 1)":1,
915 "EBF site 31 (partition 1)":1,
916 "EBF site 32 (partition 1)":1,
917 "EBF site 33 (partition 1)":1,
918 "EBF site 34 (partition 1)":1,
919 "EBF site 35 (partition 1)":1,
920 "EBF site 36 (partition 1)":1,
921 "EBF site 37 (partition 1)":1,
922 "EBF site 38 (partition 1)":1,
923 "EBF site 39 (partition 1)":1,
924 "EBF site 4 (partition 1)":1,
925 "EBF site 40 (partition 1)":1,
926 "EBF site 41 (partition 1)":1,
927 "EBF site 42 (partition 1)":1,
928 "EBF site 43 (partition 1)":1,
929 "EBF site 44 (partition 1)":1,
930 "EBF site 45 (partition 1)":1,
931 "EBF site 46 (partition 1)":1,
932 "EBF site 47 (partition 1)":1,
933 "EBF site 48 (partition 1)":1,
934 "EBF site 49 (partition 1)":1,
935 "EBF site 5 (partition 1)":1,
936 "EBF site 50 (partition 1)":1,
937 "EBF site 51 (partition 1)":1,
938 "EBF site 52 (partition 1)":1,
939 "EBF site 53 (partition 1)":1,
940 "EBF site 54 (partition 1)":1,
941 "EBF site 55 (partition 1)":1,
942 "EBF site 56 (partition 1)":1,
943 "EBF site 57 (partition 1)":0.7986289437851897,
944 "EBF site 58 (partition 1)":1,
945 "EBF site 59 (partition 1)":1,
946 "EBF site 6 (partition 1)":0.8945610771453527,
947 "EBF site 60 (partition 1)":1,
948 "EBF site 61 (partition 1)":0.8922012581491121,
949 "EBF site 7 (partition 1)":1,
950 "EBF site 8 (partition 1)":0.8937362470345004,
951 "EBF site 9 (partition 1)":1,
952 "Global MG94xREV":0.005568565107944807,
953 "Nucleotide GTR":0.005501881860632767,
954 "original name":"epi_isl_1589926/hCoV-19/India/WB-1930300586246/2021"
955 },
956 "epi_isl_1631286_hCoV_19_England_CAMC_14E7527_2021":{
957 "EBF site 1 (partition 1)":1,
958 "EBF site 10 (partition 1)":1,
959 "EBF site 11 (partition 1)":1,
960 "EBF site 12 (partition 1)":1,
961 "EBF site 13 (partition 1)":1,
962 "EBF site 14 (partition 1)":1,
963 "EBF site 15 (partition 1)":1,
964 "EBF site 16 (partition 1)":1,
965 "EBF site 17 (partition 1)":1,
966 "EBF site 18 (partition 1)":1,
967 "EBF site 19 (partition 1)":1,
968 "EBF site 2 (partition 1)":1,
969 "EBF site 20 (partition 1)":0.7910714200449187,
970 "EBF site 21 (partition 1)":1,
971 "EBF site 22 (partition 1)":1,
972 "EBF site 24 (partition 1)":0.8893237211020406,
973 "EBF site 25 (partition 1)":1,
974 "EBF site 26 (partition 1)":1,
975 "EBF site 27 (partition 1)":1,
976 "EBF site 28 (partition 1)":1,
977 "EBF site 29 (partition 1)":1,
978 "EBF site 3 (partition 1)":1,
979 "EBF site 30 (partition 1)":1,
980 "EBF site 31 (partition 1)":1,
981 "EBF site 32 (partition 1)":1,
982 "EBF site 33 (partition 1)":1,
983 "EBF site 34 (partition 1)":1,
984 "EBF site 35 (partition 1)":1,
985 "EBF site 36 (partition 1)":1,
986 "EBF site 37 (partition 1)":1,
987 "EBF site 38 (partition 1)":1,
988 "EBF site 39 (partition 1)":1,
989 "EBF site 4 (partition 1)":1,
990 "EBF site 40 (partition 1)":1,
991 "EBF site 41 (partition 1)":1,
992 "EBF site 42 (partition 1)":1,
993 "EBF site 43 (partition 1)":1,
994 "EBF site 44 (partition 1)":1,
995 "EBF site 45 (partition 1)":1,
996 "EBF site 46 (partition 1)":1,
997 "EBF site 47 (partition 1)":1,
998 "EBF site 48 (partition 1)":1,
999 "EBF site 49 (partition 1)":1,
1000 "EBF site 5 (partition 1)":1,
1001 "EBF site 50 (partition 1)":1,
1002 "EBF site 51 (partition 1)":1,
1003 "EBF site 52 (partition 1)":1,
1004 "EBF site 53 (partition 1)":1,
1005 "EBF site 54 (partition 1)":1,
1006 "EBF site 55 (partition 1)":1,
1007 "EBF site 56 (partition 1)":1,
1008 "EBF site 57 (partition 1)":18.39195605031884,
1009 "EBF site 58 (partition 1)":1,
1010 "EBF site 59 (partition 1)":1,
1011 "EBF site 6 (partition 1)":0.8944161065245172,
1012 "EBF site 60 (partition 1)":1,
1013 "EBF site 61 (partition 1)":0.8920537294490001,
1014 "EBF site 7 (partition 1)":1,
1015 "EBF site 8 (partition 1)":0.8935904002586167,
1016 "EBF site 9 (partition 1)":1,
1017 "Global MG94xREV":0.005576742951974244,
1018 "Nucleotide GTR":0.005501706304611714,
1019 "original name":"epi_isl_1631286/hCoV-19/England/CAMC-14E7527/2021"
1020 },
1021 "gb_LC571023_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_DP0724_Segment_null_Host_Human":{
1022 "Global MG94xREV":0.005625443729561243,
1023 "Nucleotide GTR":0.005503988159180567,
1024 "original name":"gb_LC571023_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_DP0724_Segment_null_Host_Human"
1025 },
1026 "gb_MT326182_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CT_UW_1365_2020_Segment_null_Host_Human":{
1027 "Global MG94xREV":0.00570992284952657,
1028 "Nucleotide GTR":0.005541311472381236,
1029 "original name":"gb_MT326182_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CT_UW_1365_2020_Segment_null_Host_Human"
1030 },
1031 "gb_MT358638_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_DEU_FFM1_2020_Segment_null_Host_Human":{
1032 "Global MG94xREV":0.005591786722003633,
1033 "Nucleotide GTR":0.005474004903669556,
1034 "original name":"gb_MT358638_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_DEU_FFM1_2020_Segment_null_Host_Human"
1035 },
1036 "gb_MT359866_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_ESP_VH198152683_2020_Segment_null_Host_Human":{
1037 "Global MG94xREV":0.005589919271399852,
1038 "Nucleotide GTR":0.005469223246210523,
1039 "original name":"gb_MT359866_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_ESP_VH198152683_2020_Segment_null_Host_Human"
1040 },
1041 "gb_MT447156_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_THA_SI200383_NT_2020_Segment_null_Host_Human":{
1042 "Global MG94xREV":0.005594417293215322,
1043 "Nucleotide GTR":0.005477059841797375,
1044 "original name":"gb_MT447156_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_THA_SI200383_NT_2020_Segment_null_Host_Human"
1045 },
1046 "gb_MT449654_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CA_CZB_1063_2020_Segment_null_Host_Human":{
1047 "Global MG94xREV":0,
1048 "Nucleotide GTR":0,
1049 "original name":"gb_MT449654_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CA_CZB_1063_2020_Segment_null_Host_Human"
1050 },
1051 "gb_MT451104_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_AUS_VIC203_2020_Segment_null_Host_Human":{
1052 "Global MG94xREV":0,
1053 "Nucleotide GTR":0,
1054 "original name":"gb_MT451104_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_AUS_VIC203_2020_Segment_null_Host_Human"
1055 },
1056 "gb_MT520188_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_MA_MGH_00184_2020_Segment_null_Host_Human":{
1057 "Global MG94xREV":0.005643836997888733,
1058 "Nucleotide GTR":0.005513415162685614,
1059 "original name":"gb_MT520188_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_MA_MGH_00184_2020_Segment_null_Host_Human"
1060 },
1061 "gb_MT520493_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_MA_MGH_00316_2020_Segment_null_Host_Human":{
1062 "Global MG94xREV":0,
1063 "Nucleotide GTR":0,
1064 "original name":"gb_MT520493_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_MA_MGH_00316_2020_Segment_null_Host_Human"
1065 },
1066 "gb_MT601276_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_BGD_BCSIR_NILMRC_52_2020_Segment_null_Host_Human":{
1067 "Global MG94xREV":0.005591410289624195,
1068 "Nucleotide GTR":0.005472320917083399,
1069 "original name":"gb_MT601276_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_BGD_BCSIR_NILMRC_52_2020_Segment_null_Host_Human"
1070 },
1071 "gb_MT601281_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_BGD_BCSIR_NILMRC_67_2020_Segment_null_Host_Human":{
1072 "Global MG94xREV":0.005699222841336904,
1073 "Nucleotide GTR":0.005541174876424373,
1074 "original name":"gb_MT601281_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_BGD_BCSIR_NILMRC_67_2020_Segment_null_Host_Human"
1075 },
1076 "gb_MT612186_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_AUS_VIC1576_2020_Segment_null_Host_Human":{
1077 "Global MG94xREV":0.005585829046704516,
1078 "Nucleotide GTR":0.005477834152100824,
1079 "original name":"gb_MT612186_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_AUS_VIC1576_2020_Segment_null_Host_Human"
1080 },
1081 "gb_MT627613_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_WA_S260_2020_Segment_null_Host_Human":{
1082 "Global MG94xREV":0,
1083 "Nucleotide GTR":0,
1084 "original name":"gb_MT627613_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_WA_S260_2020_Segment_null_Host_Human"
1085 },
1086 "gb_MT631787_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CA_CZB_1651_2020_Segment_null_Host_Human":{
1087 "Global MG94xREV":0.005714644211461833,
1088 "Nucleotide GTR":0.005548568325838462,
1089 "original name":"gb_MT631787_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CA_CZB_1651_2020_Segment_null_Host_Human"
1090 },
1091 "gb_MT641697_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_AUS_VIC595_2020_Segment_null_Host_Human":{
1092 "Global MG94xREV":0,
1093 "Nucleotide GTR":0,
1094 "original name":"gb_MT641697_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_AUS_VIC595_2020_Segment_null_Host_Human"
1095 },
1096 "gb_MT683417_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_WA_UW_10131_2020_Segment_null_Host_Human":{
1097 "Global MG94xREV":0.005593469729805412,
1098 "Nucleotide GTR":0.005474004634873228,
1099 "original name":"gb_MT683417_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_WA_UW_10131_2020_Segment_null_Host_Human"
1100 },
1101 "gb_MT706153_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_WI_UW_32_2020_Segment_null_Host_Human":{
1102 "Global MG94xREV":0.005577547296049738,
1103 "Nucleotide GTR":0.005469223246210523,
1104 "original name":"gb_MT706153_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_WI_UW_32_2020_Segment_null_Host_Human"
1105 },
1106 "gb_MT745697_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_AUS_VIC2124_2020_Segment_null_Host_Human":{
1107 "Global MG94xREV":0.005628430185021072,
1108 "Nucleotide GTR":0.005503961533125481,
1109 "original name":"gb_MT745697_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_AUS_VIC2124_2020_Segment_null_Host_Human"
1110 },
1111 "gb_MT745746_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_AUS_SA01_2020_Segment_null_Host_Human":{
1112 "Global MG94xREV":0.005595427368373432,
1113 "Nucleotide GTR":0.005472484462350333,
1114 "original name":"gb_MT745746_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_AUS_SA01_2020_Segment_null_Host_Human"
1115 },
1116 "gb_MT750335_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CA_CZB_1794_2020_Segment_null_Host_Human":{
1117 "Global MG94xREV":0.005624635325623979,
1118 "Nucleotide GTR":0.005504845328896214,
1119 "original name":"gb_MT750335_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CA_CZB_1794_2020_Segment_null_Host_Human"
1120 },
1121 "gb_MT772447_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_IL_UW_670_2020_Segment_null_Host_Human":{
1122 "Global MG94xREV":0.005606808725804134,
1123 "Nucleotide GTR":0.005476520487977195,
1124 "original name":"gb_MT772447_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_IL_UW_670_2020_Segment_null_Host_Human"
1125 },
1126 "gb_MT782360_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_UT_04172_2020_Segment_null_Host_Human":{
1127 "Global MG94xREV":0,
1128 "Nucleotide GTR":0,
1129 "original name":"gb_MT782360_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_UT_04172_2020_Segment_null_Host_Human"
1130 },
1131 "gb_MT811295_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_SEARCH_0657_IPL_2020_Segment_null_Host_Human":{
1132 "Global MG94xREV":0.005602779414095357,
1133 "Nucleotide GTR":0.005483116643606682,
1134 "original name":"gb_MT811295_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_SEARCH_0657_IPL_2020_Segment_null_Host_Human"
1135 },
1136 "gb_MT811511_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_SEARCH_1079_SAN_2020_Segment_null_Host_Human":{
1137 "Global MG94xREV":0.005594934428031569,
1138 "Nucleotide GTR":0.005477759479364592,
1139 "original name":"gb_MT811511_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_SEARCH_1079_SAN_2020_Segment_null_Host_Human"
1140 },
1141 "gb_MT811669_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_SEARCH_0155_NBG_2020_Segment_null_Host_Human":{
1142 "Global MG94xREV":0.005608438497572238,
1143 "Nucleotide GTR":0.005479500974163274,
1144 "original name":"gb_MT811669_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_SEARCH_0155_NBG_2020_Segment_null_Host_Human"
1145 },
1146 "gb_MT825091_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_IRN_COVID19_IRVSH1_2020_Segment_null_Host_Human":{
1147 "Global MG94xREV":0.005707279732364202,
1148 "Nucleotide GTR":0.005548680261509582,
1149 "original name":"gb_MT825091_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_IRN_COVID19_IRVSH1_2020_Segment_null_Host_Human"
1150 },
1151 "gb_MT834049_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_WA_S1626_2020_Segment_null_Host_Human":{
1152 "Global MG94xREV":0.005606583852762365,
1153 "Nucleotide GTR":0.005476300932011254,
1154 "original name":"gb_MT834049_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_WA_S1626_2020_Segment_null_Host_Human"
1155 },
1156 "gb_MT847221_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_BGD_BCSIR_NILMRC_283_2020_Segment_null_Host_Human":{
1157 "Global MG94xREV":0.005633795125983258,
1158 "Nucleotide GTR":0.005500744984499848,
1159 "original name":"gb_MT847221_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_BGD_BCSIR_NILMRC_283_2020_Segment_null_Host_Human"
1160 },
1161 "gb_MT860680_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_BGD_DNAS_DRICM_isl_MH_09_2020_Segment_null_Host_Human":{
1162 "Global MG94xREV":0,
1163 "Nucleotide GTR":0,
1164 "original name":"gb_MT860680_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_BGD_DNAS_DRICM_isl_MH_09_2020_Segment_null_Host_Human"
1165 },
1166 "gb_MT873189_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_MA_DPH_00301_2020_Segment_null_Host_Human":{
1167 "Global MG94xREV":0.00559938664140668,
1168 "Nucleotide GTR":0.005504877668596932,
1169 "original name":"gb_MT873189_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_MA_DPH_00301_2020_Segment_null_Host_Human"
1170 },
1171 "gb_MT890240_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_GHA_2709_S25_2020_Segment_null_Host_Human":{
1172 "Global MG94xREV":0.005631622830079517,
1173 "Nucleotide GTR":0.00550789288743052,
1174 "original name":"gb_MT890240_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_GHA_2709_S25_2020_Segment_null_Host_Human"
1175 },
1176 "gb_MT913013_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_BGD_DNAS_DRICM_isl_Sharmin_2020_Segment_null_Host_Human":{
1177 "Global MG94xREV":0.005620583336796804,
1178 "Nucleotide GTR":0.005502683897463829,
1179 "original name":"gb_MT913013_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_BGD_DNAS_DRICM_isl_Sharmin_2020_Segment_null_Host_Human"
1180 },
1181 "gb_MT940460_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_IND_GBRC331_2020_Segment_null_Host_Human":{
1182 "Global MG94xREV":0.005631429256778813,
1183 "Nucleotide GTR":0.005501967924009293,
1184 "original name":"gb_MT940460_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_IND_GBRC331_2020_Segment_null_Host_Human"
1185 },
1186 "gb_MT940472_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_IND_GBRC334a_2020_Segment_null_Host_Human":{
1187 "Global MG94xREV":0.005558872800771559,
1188 "Nucleotide GTR":0.005447824378065953,
1189 "original name":"gb_MT940472_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_IND_GBRC334a_2020_Segment_null_Host_Human"
1190 },
1191 "gb_MT946870_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_WA_S2716_2020_Segment_null_Host_Human":{
1192 "Global MG94xREV":0.005606801741396091,
1193 "Nucleotide GTR":0.005479358689431805,
1194 "original name":"gb_MT946870_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_WA_S2716_2020_Segment_null_Host_Human"
1195 },
1196 "gb_MT969697_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_AUS_VIC2890_2020_Segment_null_Host_Human":{
1197 "Global MG94xREV":0.005631797260719136,
1198 "Nucleotide GTR":0.005545318968958342,
1199 "original name":"gb_MT969697_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_AUS_VIC2890_2020_Segment_null_Host_Human"
1200 },
1201 "gb_MT973414_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_AUS_TAS83_2020_Segment_null_Host_Human":{
1202 "Global MG94xREV":0.005573726843146466,
1203 "Nucleotide GTR":0.00550059729577716,
1204 "original name":"gb_MT973414_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_AUS_TAS83_2020_Segment_null_Host_Human"
1205 },
1206 "gb_MW035934_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CA_CZB_2214_2020_Segment_null_Host_Human":{
1207 "Global MG94xREV":0.005591361028022017,
1208 "Nucleotide GTR":0.005472272548333728,
1209 "original name":"gb_MW035934_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CA_CZB_2214_2020_Segment_null_Host_Human"
1210 },
1211 "gb_MW047313_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_WRCEVA_000509_2020_Segment_null_Host_Human":{
1212 "Global MG94xREV":0.005593741820197527,
1213 "Nucleotide GTR":0.005475919308972768,
1214 "original name":"gb_MW047313_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_WRCEVA_000509_2020_Segment_null_Host_Human"
1215 },
1216 "gb_MW056168_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_FL_BPHL_1521_2020_Segment_null_Host_Human":{
1217 "Global MG94xREV":0,
1218 "Nucleotide GTR":0,
1219 "original name":"gb_MW056168_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_FL_BPHL_1521_2020_Segment_null_Host_Human"
1220 },
1221 "gb_MW064840_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_MI_QDX_825_2020_Segment_null_Host_Human":{
1222 "Global MG94xREV":0.005590314811331633,
1223 "Nucleotide GTR":0.005468319661672707,
1224 "original name":"gb_MW064840_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_MI_QDX_825_2020_Segment_null_Host_Human"
1225 },
1226 "gb_MW064863_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_WI_QDX_779_2020_Segment_null_Host_Human":{
1227 "Global MG94xREV":0.005705433630317571,
1228 "Nucleotide GTR":0.005541780329492433,
1229 "original name":"gb_MW064863_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_WI_QDX_779_2020_Segment_null_Host_Human"
1230 },
1231 "gb_MW093451_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_TX_DSHS_0533_2020_Segment_null_Host_Human":{
1232 "Global MG94xREV":0.00558167691796866,
1233 "Nucleotide GTR":0.005473273369957197,
1234 "original name":"gb_MW093451_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_TX_DSHS_0533_2020_Segment_null_Host_Human"
1235 },
1236 "gb_MW134116_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CA_CZB_3258_2020_Segment_null_Host_Human":{
1237 "Global MG94xREV":0.005620053150521703,
1238 "Nucleotide GTR":0.005502164104360319,
1239 "original name":"gb_MW134116_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CA_CZB_3258_2020_Segment_null_Host_Human"
1240 },
1241 "gb_MW134227_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CA_CZB_3762_2020_Segment_null_Host_Human":{
1242 "Global MG94xREV":0,
1243 "Nucleotide GTR":0,
1244 "original name":"gb_MW134227_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CA_CZB_3762_2020_Segment_null_Host_Human"
1245 },
1246 "gb_MW154346_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_AUS_VIC7465_2020_Segment_null_Host_Human":{
1247 "Global MG94xREV":0.00558926836238096,
1248 "Nucleotide GTR":0.005469891469620213,
1249 "original name":"gb_MW154346_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_AUS_VIC7465_2020_Segment_null_Host_Human"
1250 },
1251 "gb_MW154411_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_AUS_VIC6964_2020_Segment_null_Host_Human":{
1252 "Global MG94xREV":0.005626707674949456,
1253 "Nucleotide GTR":0.005503925758102057,
1254 "original name":"gb_MW154411_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_AUS_VIC6964_2020_Segment_null_Host_Human"
1255 },
1256 "gb_MW155278_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_AUS_VIC12385_2020_Segment_null_Host_Human":{
1257 "Global MG94xREV":0.005599591446132323,
1258 "Nucleotide GTR":0.00546921831544746,
1259 "original name":"gb_MW155278_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_AUS_VIC12385_2020_Segment_null_Host_Human"
1260 },
1261 "gb_MW155387_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_AUS_VIC13741_2020_Segment_null_Host_Human":{
1262 "Global MG94xREV":0,
1263 "Nucleotide GTR":0,
1264 "original name":"gb_MW155387_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_AUS_VIC13741_2020_Segment_null_Host_Human"
1265 },
1266 "gb_MW155642_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_AUS_VIC13394_2020_Segment_null_Host_Human":{
1267 "Global MG94xREV":0.005595351669285591,
1268 "Nucleotide GTR":0.005481939800174911,
1269 "original name":"gb_MW155642_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_AUS_VIC13394_2020_Segment_null_Host_Human"
1270 },
1271 "gb_MW155738_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_AUS_VIC11358_2020_Segment_null_Host_Human":{
1272 "Global MG94xREV":0.005587580984696219,
1273 "Nucleotide GTR":0.005469886922523423,
1274 "original name":"gb_MW155738_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_AUS_VIC11358_2020_Segment_null_Host_Human"
1275 },
1276 "gb_MW155761_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_AUS_VIC10624_2020_Segment_null_Host_Human":{
1277 "Global MG94xREV":0,
1278 "Nucleotide GTR":0,
1279 "original name":"gb_MW155761_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_AUS_VIC10624_2020_Segment_null_Host_Human"
1280 },
1281 "gb_MW156645_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_AUS_VIC11076_2020_Segment_null_Host_Human":{
1282 "Global MG94xREV":0.005631461427254542,
1283 "Nucleotide GTR":0.005498065837320296,
1284 "original name":"gb_MW156645_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_AUS_VIC11076_2020_Segment_null_Host_Human"
1285 },
1286 "gb_MW156732_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_AUS_VIC10631_2020_Segment_null_Host_Human":{
1287 "Global MG94xREV":0,
1288 "Nucleotide GTR":0,
1289 "original name":"gb_MW156732_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_AUS_VIC10631_2020_Segment_null_Host_Human"
1290 },
1291 "gb_MW156840_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_AUS_VIC11409_2020_Segment_null_Host_Human":{
1292 "Global MG94xREV":0,
1293 "Nucleotide GTR":0,
1294 "original name":"gb_MW156840_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_AUS_VIC11409_2020_Segment_null_Host_Human"
1295 },
1296 "gb_MW156971_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_AUS_VIC10203_2020_Segment_null_Host_Human":{
1297 "Global MG94xREV":0,
1298 "Nucleotide GTR":0,
1299 "original name":"gb_MW156971_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_AUS_VIC10203_2020_Segment_null_Host_Human"
1300 },
1301 "gb_MW157056_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_AUS_VIC11469_2020_Segment_null_Host_Human":{
1302 "Global MG94xREV":0.005608363065658171,
1303 "Nucleotide GTR":0.005475509356237068,
1304 "original name":"gb_MW157056_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_AUS_VIC11469_2020_Segment_null_Host_Human"
1305 },
1306 "gb_MW181508_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_UT_UPHL_201017695_2020_Segment_null_Host_Human":{
1307 "Global MG94xREV":0,
1308 "Nucleotide GTR":0,
1309 "original name":"gb_MW181508_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_UT_UPHL_201017695_2020_Segment_null_Host_Human"
1310 },
1311 "gb_MW181734_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_Homo_sapiens_HKG_Case5054_2020_Segment_null_Host_Human":{
1312 "Global MG94xREV":0.005577337698600989,
1313 "Nucleotide GTR":0.005479314715257354,
1314 "original name":"gb_MW181734_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_Homo_sapiens_HKG_Case5054_2020_Segment_null_Host_Human"
1315 },
1316 "gb_MW181739_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_Homo_sapiens_HKG_Case5119_2020_Segment_null_Host_Human":{
1317 "Global MG94xREV":0,
1318 "Nucleotide GTR":0,
1319 "original name":"gb_MW181739_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_Homo_sapiens_HKG_Case5119_2020_Segment_null_Host_Human"
1320 },
1321 "gb_MW190571_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_UT_QDX_1809_2020_Segment_null_Host_Human":{
1322 "Global MG94xREV":0.005596899747488087,
1323 "Nucleotide GTR":0.005469223246210523,
1324 "original name":"gb_MW190571_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_UT_QDX_1809_2020_Segment_null_Host_Human"
1325 },
1326 "gb_MW193966_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_IND_nimh_12171_2020_Segment_null_Host_Human":{
1327 "Global MG94xREV":0.005622760517131436,
1328 "Nucleotide GTR":0.005502683793209609,
1329 "original name":"gb_MW193966_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_IND_nimh_12171_2020_Segment_null_Host_Human"
1330 },
1331 "gb_MW206535_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_FL_BPHL_1865_2020_Segment_null_Host_Human":{
1332 "Global MG94xREV":0.0003800049521821387,
1333 "Nucleotide GTR":3.446325207460451e-05,
1334 "original name":"gb_MW206535_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_FL_BPHL_1865_2020_Segment_null_Host_Human"
1335 },
1336 "gb_MW208032_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_VA_DCLS_1590_2020_Segment_null_Host_Human":{
1337 "Global MG94xREV":0.005553335252079292,
1338 "Nucleotide GTR":0.005484718157318245,
1339 "original name":"gb_MW208032_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_VA_DCLS_1590_2020_Segment_null_Host_Human"
1340 },
1341 "gb_MW243997_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_MD_MDH_0302_2020_Segment_null_Host_Human":{
1342 "Global MG94xREV":0.005606726634993475,
1343 "Nucleotide GTR":0.005472272589954402,
1344 "original name":"gb_MW243997_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_MD_MDH_0302_2020_Segment_null_Host_Human"
1345 },
1346 "gb_MW244002_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_MD_MDH_0307_2020_Segment_null_Host_Human":{
1347 "Global MG94xREV":0.005594770869231513,
1348 "Nucleotide GTR":0.005469725444783823,
1349 "original name":"gb_MW244002_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_MD_MDH_0307_2020_Segment_null_Host_Human"
1350 },
1351 "gb_MW265628_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_UT_UPHL_201129040_2020_Segment_null_Host_Human":{
1352 "Global MG94xREV":0,
1353 "Nucleotide GTR":0,
1354 "original name":"gb_MW265628_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_UT_UPHL_201129040_2020_Segment_null_Host_Human"
1355 },
1356 "gb_MW277035_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_AUS_VIC16243_2020_Segment_null_Host_Human":{
1357 "Global MG94xREV":0.005590816565229208,
1358 "Nucleotide GTR":0.005473534032983342,
1359 "original name":"gb_MW277035_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_AUS_VIC16243_2020_Segment_null_Host_Human"
1360 },
1361 "gb_MW295643_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_TUN_TUN_202058412_2020_Segment_null_Host_Human":{
1362 "Global MG94xREV":0.005595805219713066,
1363 "Nucleotide GTR":0.005476623359288796,
1364 "original name":"gb_MW295643_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_TUN_TUN_202058412_2020_Segment_null_Host_Human"
1365 },
1366 "gb_MW306356_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CA_CZB_12795_2020_Segment_null_Host_Human":{
1367 "Global MG94xREV":0,
1368 "Nucleotide GTR":0,
1369 "original name":"gb_MW306356_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CA_CZB_12795_2020_Segment_null_Host_Human"
1370 },
1371 "gb_MW321239_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_AUS_VIC17424_2020_Segment_null_Host_Human":{
1372 "Global MG94xREV":0.00559716714575011,
1373 "Nucleotide GTR":0.005469940951746653,
1374 "original name":"gb_MW321239_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_AUS_VIC17424_2020_Segment_null_Host_Human"
1375 },
1376 "gb_MW321253_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_AUS_VIC17363_2020_Segment_null_Host_Human":{
1377 "Global MG94xREV":0.00563520070791567,
1378 "Nucleotide GTR":0.005502119229349008,
1379 "original name":"gb_MW321253_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_AUS_VIC17363_2020_Segment_null_Host_Human"
1380 },
1381 "gb_MW332559_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_BHR_341036734_S5_L001_2020_Segment_null_Host_Human":{
1382 "Global MG94xREV":0,
1383 "Nucleotide GTR":0,
1384 "original name":"gb_MW332559_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_BHR_341036734_S5_L001_2020_Segment_null_Host_Human"
1385 },
1386 "gb_MW341989_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_WI_UW_2124_2020_Segment_null_Host_Human":{
1387 "Global MG94xREV":0.005647021716533173,
1388 "Nucleotide GTR":0.005511608249827844,
1389 "original name":"gb_MW341989_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_WI_UW_2124_2020_Segment_null_Host_Human"
1390 },
1391 "gb_MW375980_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_UT_UPHL_201216229_2020_Segment_null_Host_Human":{
1392 "Global MG94xREV":0.006583164931338059,
1393 "Nucleotide GTR":0.0064499981078652,
1394 "original name":"gb_MW375980_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_UT_UPHL_201216229_2020_Segment_null_Host_Human"
1395 },
1396 "gb_MW406537_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_IN_CDC_2_3693679_2020_Segment_null_Host_Human":{
1397 "Global MG94xREV":0.005591410289624195,
1398 "Nucleotide GTR":0.005472320917083399,
1399 "original name":"gb_MW406537_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_IN_CDC_2_3693679_2020_Segment_null_Host_Human"
1400 },
1401 "gb_MW420890_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_NMDOH_2020316507_2020_Segment_null_Host_Human":{
1402 "Global MG94xREV":0.005650746367647013,
1403 "Nucleotide GTR":0.005522312703266265,
1404 "original name":"gb_MW420890_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_NMDOH_2020316507_2020_Segment_null_Host_Human"
1405 },
1406 "gb_MW433771_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CA_LACPHL_AF00076_2020_Segment_null_Host_Human":{
1407 "Global MG94xREV":0.005617879278576598,
1408 "Nucleotide GTR":0.005506158238914855,
1409 "original name":"gb_MW433771_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CA_LACPHL_AF00076_2020_Segment_null_Host_Human"
1410 },
1411 "gb_MW435625_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_TX_DSHS_1968_2020_Segment_null_Host_Human":{
1412 "Global MG94xREV":0.005620791031025037,
1413 "Nucleotide GTR":0.005500747053952925,
1414 "original name":"gb_MW435625_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_TX_DSHS_1968_2020_Segment_null_Host_Human"
1415 },
1416 "gb_MW447630_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_PAK_JRCGR_KHI15_2020_Segment_null_Host_Human":{
1417 "Global MG94xREV":0.005628620932055481,
1418 "Nucleotide GTR":0.005504954920969972,
1419 "original name":"gb_MW447630_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_PAK_JRCGR_KHI15_2020_Segment_null_Host_Human"
1420 },
1421 "gb_MW452545_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_TUN_TUN_ADAGE_T_15425_20_2020_Segment_null_Host_Human":{
1422 "Global MG94xREV":0.005596377556106687,
1423 "Nucleotide GTR":0.005475543502124678,
1424 "original name":"gb_MW452545_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_TUN_TUN_ADAGE_T_15425_20_2020_Segment_null_Host_Human"
1425 },
1426 "gb_MW462661_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_MN_MDH_2263_2020_Segment_null_Host_Human":{
1427 "Global MG94xREV":0.00559520708161924,
1428 "Nucleotide GTR":0.005477834152100824,
1429 "original name":"gb_MW462661_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_MN_MDH_2263_2020_Segment_null_Host_Human"
1430 },
1431 "gb_MW467476_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_EGY_EGY_CCHE57357_A_71_2020_Segment_null_Host_Human":{
1432 "Global MG94xREV":0.005627518337115913,
1433 "Nucleotide GTR":0.005503877292547554,
1434 "original name":"gb_MW467476_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_EGY_EGY_CCHE57357_A_71_2020_Segment_null_Host_Human"
1435 },
1436 "gb_MW467498_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_EGY_EGY_CCHE57357_P_32_2020_Segment_null_Host_Human":{
1437 "Global MG94xREV":0.005631898590697001,
1438 "Nucleotide GTR":0.005503889967867453,
1439 "original name":"gb_MW467498_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_EGY_EGY_CCHE57357_P_32_2020_Segment_null_Host_Human"
1440 },
1441 "gb_MW474247_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_WA_S3080_2020_Segment_null_Host_Human":{
1442 "Global MG94xREV":0,
1443 "Nucleotide GTR":0,
1444 "original name":"gb_MW474247_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_WA_S3080_2020_Segment_null_Host_Human"
1445 },
1446 "gb_MW483544_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CA_CZB_13396_2020_Segment_null_Host_Human":{
1447 "Global MG94xREV":0.005627586887035462,
1448 "Nucleotide GTR":0.005503944429328287,
1449 "original name":"gb_MW483544_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CA_CZB_13396_2020_Segment_null_Host_Human"
1450 },
1451 "gb_MW483548_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CA_CZB_13407_2020_Segment_null_Host_Human":{
1452 "Global MG94xREV":0,
1453 "Nucleotide GTR":0,
1454 "original name":"gb_MW483548_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CA_CZB_13407_2020_Segment_null_Host_Human"
1455 },
1456 "gb_MW486406_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_WI_UW_2638_2020_Segment_null_Host_Human":{
1457 "Global MG94xREV":0.005602460201045232,
1458 "Nucleotide GTR":0.005472272548333728,
1459 "original name":"gb_MW486406_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_WI_UW_2638_2020_Segment_null_Host_Human"
1460 },
1461 "gb_MW490743_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_FL_BPHL_2463_2020_Segment_null_Host_Human":{
1462 "Global MG94xREV":0.005593545461979567,
1463 "Nucleotide GTR":0.005471480342734438,
1464 "original name":"gb_MW490743_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_FL_BPHL_2463_2020_Segment_null_Host_Human"
1465 },
1466 "gb_MW490862_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_FL_BPHL_2441_2020_Segment_null_Host_Human":{
1467 "Global MG94xREV":0.005551269622625383,
1468 "Nucleotide GTR":0.005446874253125438,
1469 "original name":"gb_MW490862_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_FL_BPHL_2441_2020_Segment_null_Host_Human"
1470 },
1471 "gb_MW490888_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_FL_BPHL_2295_2020_Segment_null_Host_Human":{
1472 "Global MG94xREV":0.005603475731176952,
1473 "Nucleotide GTR":0.005476108506301237,
1474 "original name":"gb_MW490888_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_FL_BPHL_2295_2020_Segment_null_Host_Human"
1475 },
1476 "gb_MW490946_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_FL_BPHL_2353_2020_Segment_null_Host_Human":{
1477 "Global MG94xREV":0,
1478 "Nucleotide GTR":0,
1479 "original name":"gb_MW490946_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_FL_BPHL_2353_2020_Segment_null_Host_Human"
1480 },
1481 "gb_MW491211_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_FL_BPHL_2755_2020_Segment_null_Host_Human":{
1482 "Global MG94xREV":0.005571456515223237,
1483 "Nucleotide GTR":0.005473534846643134,
1484 "original name":"gb_MW491211_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_FL_BPHL_2755_2020_Segment_null_Host_Human"
1485 },
1486 "gb_MW493999_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_WA_S3367_2020_Segment_null_Host_Human":{
1487 "Global MG94xREV":0.005599041993646883,
1488 "Nucleotide GTR":0.005479467003492122,
1489 "original name":"gb_MW493999_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_WA_S3367_2020_Segment_null_Host_Human"
1490 },
1491 "gb_MW494387_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_NH_CDC_STM_A100009_2021_Segment_null_Host_Human":{
1492 "Global MG94xREV":0.005639680120219169,
1493 "Nucleotide GTR":0.005526708482947178,
1494 "original name":"gb_MW494387_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_NH_CDC_STM_A100009_2021_Segment_null_Host_Human"
1495 },
1496 "gb_MW505295_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_TX_QDX_3142_2021_Segment_null_Host_Human":{
1497 "Global MG94xREV":0,
1498 "Nucleotide GTR":0,
1499 "original name":"gb_MW505295_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_TX_QDX_3142_2021_Segment_null_Host_Human"
1500 },
1501 "gb_MW509810_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_EGY_CUNCI_HGC11I035_2021_Segment_null_Host_Human":{
1502 "Global MG94xREV":0.005586088008998721,
1503 "Nucleotide GTR":0.005465473449096384,
1504 "original name":"gb_MW509810_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_EGY_CUNCI_HGC11I035_2021_Segment_null_Host_Human"
1505 },
1506 "gb_MW518151_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_IN_CDC_STM_A008_2021_Segment_null_Host_Human":{
1507 "Global MG94xREV":0.005634240631758829,
1508 "Nucleotide GTR":0.005500779085909651,
1509 "original name":"gb_MW518151_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_IN_CDC_STM_A008_2021_Segment_null_Host_Human"
1510 },
1511 "gb_MW519641_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CT_CDC_STM_A100453_2021_Segment_null_Host_Human":{
1512 "Global MG94xREV":0.005592097236703835,
1513 "Nucleotide GTR":0.005477110327819453,
1514 "original name":"gb_MW519641_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CT_CDC_STM_A100453_2021_Segment_null_Host_Human"
1515 },
1516 "gb_MW519702_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_IN_CDC_STM_A100466_2021_Segment_null_Host_Human":{
1517 "Global MG94xREV":0.005596421386762807,
1518 "Nucleotide GTR":0.005469212541650541,
1519 "original name":"gb_MW519702_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_IN_CDC_STM_A100466_2021_Segment_null_Host_Human"
1520 },
1521 "gb_MW519849_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_PA_CDC_STM_A100104_2021_Segment_null_Host_Human":{
1522 "Global MG94xREV":0.005588954140401627,
1523 "Nucleotide GTR":0.005469916208737902,
1524 "original name":"gb_MW519849_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_PA_CDC_STM_A100104_2021_Segment_null_Host_Human"
1525 },
1526 "gb_MW521749_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_NV_QDX_3543_2020_Segment_null_Host_Human":{
1527 "Global MG94xREV":0.005656794625639945,
1528 "Nucleotide GTR":0.005524129764360818,
1529 "original name":"gb_MW521749_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_NV_QDX_3543_2020_Segment_null_Host_Human"
1530 },
1531 "gb_MW521810_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_TX_QDX_3530_2020_Segment_null_Host_Human":{
1532 "Global MG94xREV":0.005715221427981628,
1533 "Nucleotide GTR":0.005549129254647589,
1534 "original name":"gb_MW521810_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_TX_QDX_3530_2020_Segment_null_Host_Human"
1535 },
1536 "gb_MW523039_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_GA_GPHL_0001_2020_Segment_null_Host_Human":{
1537 "Global MG94xREV":0.005587898066365767,
1538 "Nucleotide GTR":0.005470868608525645,
1539 "original name":"gb_MW523039_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_GA_GPHL_0001_2020_Segment_null_Host_Human"
1540 },
1541 "gb_MW524907_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_RI_CDC_STM_0000013_C05_2021_Segment_null_Host_Human":{
1542 "Global MG94xREV":0.005599551475806311,
1543 "Nucleotide GTR":0.005472272589954402,
1544 "original name":"gb_MW524907_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_RI_CDC_STM_0000013_C05_2021_Segment_null_Host_Human"
1545 },
1546 "gb_MW528771_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CA_QDX_3759_2021_Segment_null_Host_Human":{
1547 "Global MG94xREV":0.005577536395200471,
1548 "Nucleotide GTR":0.005469212541650541,
1549 "original name":"gb_MW528771_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CA_QDX_3759_2021_Segment_null_Host_Human"
1550 },
1551 "gb_MW528794_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CA_QDX_3784_2021_Segment_null_Host_Human":{
1552 "Global MG94xREV":0.005653200025048807,
1553 "Nucleotide GTR":0.005504548288821316,
1554 "original name":"gb_MW528794_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CA_QDX_3784_2021_Segment_null_Host_Human"
1555 },
1556 "gb_MW532096_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_BGD_GRBL_S4_2020_Segment_null_Host_Human":{
1557 "Global MG94xREV":0.005599798877094273,
1558 "Nucleotide GTR":0.005469421194916627,
1559 "original name":"gb_MW532096_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_BGD_GRBL_S4_2020_Segment_null_Host_Human"
1560 },
1561 "gb_MW539842_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_MA_MASPHL_00583_2020_Segment_null_Host_Human":{
1562 "Global MG94xREV":0.005639168077612223,
1563 "Nucleotide GTR":0.005503940468287404,
1564 "original name":"gb_MW539842_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_MA_MASPHL_00583_2020_Segment_null_Host_Human"
1565 },
1566 "gb_MW543030_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_AZ_CDC_IR9A_6594_2020_Segment_null_Host_Human":{
1567 "Global MG94xREV":0.005624245851634038,
1568 "Nucleotide GTR":0.0055006759478777,
1569 "original name":"gb_MW543030_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_AZ_CDC_IR9A_6594_2020_Segment_null_Host_Human"
1570 },
1571 "gb_MW543039_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_AZ_CDC_IR9K_5198_2020_Segment_null_Host_Human":{
1572 "Global MG94xREV":0,
1573 "Nucleotide GTR":0,
1574 "original name":"gb_MW543039_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_AZ_CDC_IR9K_5198_2020_Segment_null_Host_Human"
1575 },
1576 "gb_MW545207_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CA_QDX_3609_2021_Segment_null_Host_Human":{
1577 "Global MG94xREV":0.005624669920591335,
1578 "Nucleotide GTR":0.005504879338741244,
1579 "original name":"gb_MW545207_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CA_QDX_3609_2021_Segment_null_Host_Human"
1580 },
1581 "gb_MW545248_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CA_QDX_3654_2021_Segment_null_Host_Human":{
1582 "Global MG94xREV":0.005607827458873945,
1583 "Nucleotide GTR":0.005496815955554284,
1584 "original name":"gb_MW545248_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CA_QDX_3654_2021_Segment_null_Host_Human"
1585 },
1586 "gb_MW545306_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CA_QDX_3723_2021_Segment_null_Host_Human":{
1587 "Global MG94xREV":0.005696038252603217,
1588 "Nucleotide GTR":0.005574403599848595,
1589 "original name":"gb_MW545306_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CA_QDX_3723_2021_Segment_null_Host_Human"
1590 },
1591 "gb_MW547503_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_EGY_CUNCI_HGC09I039_2020_Segment_null_Host_Human":{
1592 "Global MG94xREV":6.727838701995539e-05,
1593 "Nucleotide GTR":1.14123408151218e-09,
1594 "original name":"gb_MW547503_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_EGY_CUNCI_HGC09I039_2020_Segment_null_Host_Human"
1595 },
1596 "gb_MW549223_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_WA_S3727_2020_Segment_null_Host_Human":{
1597 "Global MG94xREV":0.005610072814509211,
1598 "Nucleotide GTR":0.005484688677972459,
1599 "original name":"gb_MW549223_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_WA_S3727_2020_Segment_null_Host_Human"
1600 },
1601 "gb_MW549830_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_MN_MDH_2465_2020_Segment_null_Host_Human":{
1602 "Global MG94xREV":0,
1603 "Nucleotide GTR":0,
1604 "original name":"gb_MW549830_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_MN_MDH_2465_2020_Segment_null_Host_Human"
1605 },
1606 "gb_MW549937_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CA_QDX_3900_2021_Segment_null_Host_Human":{
1607 "Global MG94xREV":0,
1608 "Nucleotide GTR":0,
1609 "original name":"gb_MW549937_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CA_QDX_3900_2021_Segment_null_Host_Human"
1610 },
1611 "gb_MW550020_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_ME_QDX_3871_2021_Segment_null_Host_Human":{
1612 "Global MG94xREV":0.005594324521607599,
1613 "Nucleotide GTR":0.005473534074566229,
1614 "original name":"gb_MW550020_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_ME_QDX_3871_2021_Segment_null_Host_Human"
1615 },
1616 "gb_MW550118_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CA_QDX_4040_2021_Segment_null_Host_Human":{
1617 "Global MG94xREV":0.005569435803716104,
1618 "Nucleotide GTR":0.005469423349423537,
1619 "original name":"gb_MW550118_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CA_QDX_4040_2021_Segment_null_Host_Human"
1620 },
1621 "gb_MW550458_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_WY_CDC_2_3767594_2020_Segment_null_Host_Human":{
1622 "Global MG94xREV":0.005594393610046846,
1623 "Nucleotide GTR":0.005471472344810627,
1624 "original name":"gb_MW550458_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_WY_CDC_2_3767594_2020_Segment_null_Host_Human"
1625 },
1626 "gb_MW550504_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_MN_CDC_2_3768672_2020_Segment_null_Host_Human":{
1627 "Global MG94xREV":0.005606730226665676,
1628 "Nucleotide GTR":0.005481420688897495,
1629 "original name":"gb_MW550504_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_MN_CDC_2_3768672_2020_Segment_null_Host_Human"
1630 },
1631 "gb_MW550636_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_PA_CDC_2_3768676_2020_Segment_null_Host_Human":{
1632 "Global MG94xREV":0.005627517606547703,
1633 "Nucleotide GTR":0.005503876576921026,
1634 "original name":"gb_MW550636_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_PA_CDC_2_3768676_2020_Segment_null_Host_Human"
1635 },
1636 "gb_MW550674_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_SC_CDC_2_3767563_2021_Segment_null_Host_Human":{
1637 "Global MG94xREV":0.005634840007410624,
1638 "Nucleotide GTR":0.005591009433219722,
1639 "original name":"gb_MW550674_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_SC_CDC_2_3767563_2021_Segment_null_Host_Human"
1640 },
1641 "gb_MW553298_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_ARG_Cordoba_1006_155_2020_Segment_null_Host_Human":{
1642 "Global MG94xREV":0.005619812298477012,
1643 "Nucleotide GTR":0.005501927752053467,
1644 "original name":"gb_MW553298_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_ARG_Cordoba_1006_155_2020_Segment_null_Host_Human"
1645 },
1646 "gb_MW555931_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_WA_S3980_2021_Segment_null_Host_Human":{
1647 "Global MG94xREV":0.005635201285519044,
1648 "Nucleotide GTR":0.005502119794132998,
1649 "original name":"gb_MW555931_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_WA_S3980_2021_Segment_null_Host_Human"
1650 },
1651 "gb_MW556173_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_IL_CDC_9MPQ_8899_2021_Segment_null_Host_Human":{
1652 "Global MG94xREV":0.005600153944543833,
1653 "Nucleotide GTR":0.005474989038608769,
1654 "original name":"gb_MW556173_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_IL_CDC_9MPQ_8899_2021_Segment_null_Host_Human"
1655 },
1656 "gb_MW560924_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CA_LACPHL_AF00280_2021_Segment_null_Host_Human":{
1657 "Global MG94xREV":0.02284509533431139,
1658 "Nucleotide GTR":0.02236069034936522,
1659 "original name":"gb_MW560924_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CA_LACPHL_AF00280_2021_Segment_null_Host_Human"
1660 },
1661 "gb_MW564865_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CA_CZB_14906_2020_Segment_null_Host_Human":{
1662 "Global MG94xREV":0.005594417446316588,
1663 "Nucleotide GTR":0.005477059988349209,
1664 "original name":"gb_MW564865_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CA_CZB_14906_2020_Segment_null_Host_Human"
1665 },
1666 "gb_MW564882_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CA_CZB_14886_2020_Segment_null_Host_Human":{
1667 "Global MG94xREV":0,
1668 "Nucleotide GTR":0,
1669 "original name":"gb_MW564882_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CA_CZB_14886_2020_Segment_null_Host_Human"
1670 },
1671 "gb_MW565403_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CA_CZB_14413_2020_Segment_null_Host_Human":{
1672 "Global MG94xREV":0.005628420377808867,
1673 "Nucleotide GTR":0.00550395192954325,
1674 "original name":"gb_MW565403_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CA_CZB_14413_2020_Segment_null_Host_Human"
1675 },
1676 "gb_MW565438_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CA_CZB_14344_2020_Segment_null_Host_Human":{
1677 "Global MG94xREV":0,
1678 "Nucleotide GTR":0,
1679 "original name":"gb_MW565438_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CA_CZB_14344_2020_Segment_null_Host_Human"
1680 },
1681 "gb_MW565832_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_MD_MDH_0724_2021_Segment_null_Host_Human":{
1682 "Global MG94xREV":0.005637930624046485,
1683 "Nucleotide GTR":0.005504055374831891,
1684 "original name":"gb_MW565832_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_MD_MDH_0724_2021_Segment_null_Host_Human"
1685 },
1686 "gb_MW566477_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CA_QDX_4490_2020_Segment_null_Host_Human":{
1687 "Global MG94xREV":0,
1688 "Nucleotide GTR":0,
1689 "original name":"gb_MW566477_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CA_QDX_4490_2020_Segment_null_Host_Human"
1690 },
1691 "gb_MW566557_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_TX_QDX_4471_2020_Segment_null_Host_Human":{
1692 "Global MG94xREV":0.005644974643171127,
1693 "Nucleotide GTR":0.005507465784741251,
1694 "original name":"gb_MW566557_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_TX_QDX_4471_2020_Segment_null_Host_Human"
1695 },
1696 "gb_MW566849_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_FL_BPHL_2886_2020_Segment_null_Host_Human":{
1697 "Global MG94xREV":0.005597894897064459,
1698 "Nucleotide GTR":0.00547573581121221,
1699 "original name":"gb_MW566849_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_FL_BPHL_2886_2020_Segment_null_Host_Human"
1700 },
1701 "gb_MW566943_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_FL_BPHL_2980_2020_Segment_null_Host_Human":{
1702 "Global MG94xREV":0.005594439109235765,
1703 "Nucleotide GTR":0.005477082299501769,
1704 "original name":"gb_MW566943_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_FL_BPHL_2980_2020_Segment_null_Host_Human"
1705 },
1706 "gb_MW571108_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_GHA_WACCBIP_nCoV_GS49_2021_Segment_null_Host_Human":{
1707 "Global MG94xREV":0.00561060721171603,
1708 "Nucleotide GTR":0.005482620664733259,
1709 "original name":"gb_MW571108_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_GHA_WACCBIP_nCoV_GS49_2021_Segment_null_Host_Human"
1710 },
1711 "gb_MW571118_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_GHA_WACCBIP_nCoV_GS145_2021_Segment_null_Host_Human":{
1712 "Global MG94xREV":0.00564497413082662,
1713 "Nucleotide GTR":0.005507465284314313,
1714 "original name":"gb_MW571118_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_GHA_WACCBIP_nCoV_GS145_2021_Segment_null_Host_Human"
1715 },
1716 "gb_MW571185_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_GHA_WACCBIP_nCoV_GS69_2021_Segment_null_Host_Human":{
1717 "Global MG94xREV":0.005585212765833936,
1718 "Nucleotide GTR":0.005466254167480196,
1719 "original name":"gb_MW571185_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_GHA_WACCBIP_nCoV_GS69_2021_Segment_null_Host_Human"
1720 },
1721 "gb_MW578233_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_MD_MDH_0795_2021_Segment_null_Host_Human":{
1722 "Global MG94xREV":0.005592776885362145,
1723 "Nucleotide GTR":0.005469891531533624,
1724 "original name":"gb_MW578233_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_MD_MDH_0795_2021_Segment_null_Host_Human"
1725 },
1726 "gb_MW578246_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_MD_MDH_0808_2021_Segment_null_Host_Human":{
1727 "Global MG94xREV":0,
1728 "Nucleotide GTR":0,
1729 "original name":"gb_MW578246_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_MD_MDH_0808_2021_Segment_null_Host_Human"
1730 },
1731 "gb_MW583187_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_OK_CDC_STM_000003021_2021_Segment_null_Host_Human":{
1732 "Global MG94xREV":0.005607987284385329,
1733 "Nucleotide GTR":0.00548477129419081,
1734 "original name":"gb_MW583187_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_OK_CDC_STM_000003021_2021_Segment_null_Host_Human"
1735 },
1736 "gb_MW583265_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CA_CDC_STM_000001669_2021_Segment_null_Host_Human":{
1737 "Global MG94xREV":0.005627843838488415,
1738 "Nucleotide GTR":0.005502065975482428,
1739 "original name":"gb_MW583265_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CA_CDC_STM_000001669_2021_Segment_null_Host_Human"
1740 },
1741 "gb_MW585898_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_MA_CDC_STM_000003612_2021_Segment_null_Host_Human":{
1742 "Global MG94xREV":0.005601622409671225,
1743 "Nucleotide GTR":0.005469327603117374,
1744 "original name":"gb_MW585898_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_MA_CDC_STM_000003612_2021_Segment_null_Host_Human"
1745 },
1746 "gb_MW586184_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_FL_CDC_STM_000005891_2021_Segment_null_Host_Human":{
1747 "Global MG94xREV":0.005602458594050764,
1748 "Nucleotide GTR":0.005472270976472237,
1749 "original name":"gb_MW586184_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_FL_CDC_STM_000005891_2021_Segment_null_Host_Human"
1750 },
1751 "gb_MW586256_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_FL_CDC_STM_000005477_2021_Segment_null_Host_Human":{
1752 "Global MG94xREV":0.005624783848606779,
1753 "Nucleotide GTR":0.005540564899378007,
1754 "original name":"gb_MW586256_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_FL_CDC_STM_000005477_2021_Segment_null_Host_Human"
1755 },
1756 "gb_MW586274_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_TX_CDC_STM_000005611_2021_Segment_null_Host_Human":{
1757 "Global MG94xREV":0.005600641474542659,
1758 "Nucleotide GTR":0.005470495330964893,
1759 "original name":"gb_MW586274_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_TX_CDC_STM_000005611_2021_Segment_null_Host_Human"
1760 },
1761 "gb_MW586385_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_LA_CDC_STM_000005076_2021_Segment_null_Host_Human":{
1762 "Global MG94xREV":0.00559959639929567,
1763 "Nucleotide GTR":0.005469223246210523,
1764 "original name":"gb_MW586385_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_LA_CDC_STM_000005076_2021_Segment_null_Host_Human"
1765 },
1766 "gb_MW586419_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_IA_CDC_STM_000005050_2021_Segment_null_Host_Human":{
1767 "Global MG94xREV":0.005594960747753952,
1768 "Nucleotide GTR":0.005471225791767793,
1769 "original name":"gb_MW586419_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_IA_CDC_STM_000005050_2021_Segment_null_Host_Human"
1770 },
1771 "gb_MW586670_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_FL_CDC_STM_000003618_2021_Segment_null_Host_Human":{
1772 "Global MG94xREV":0.005631563484578439,
1773 "Nucleotide GTR":0.005502098783965514,
1774 "original name":"gb_MW586670_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_FL_CDC_STM_000003618_2021_Segment_null_Host_Human"
1775 },
1776 "gb_MW586700_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CA_QDX_4173_2021_Segment_null_Host_Human":{
1777 "Global MG94xREV":0.005626677136962362,
1778 "Nucleotide GTR":0.00550519465215427,
1779 "original name":"gb_MW586700_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CA_QDX_4173_2021_Segment_null_Host_Human"
1780 },
1781 "gb_MW586846_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_NY_QDX_4256_2021_Segment_null_Host_Human":{
1782 "Global MG94xREV":0.005644491583174839,
1783 "Nucleotide GTR":0.005500857587622745,
1784 "original name":"gb_MW586846_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_NY_QDX_4256_2021_Segment_null_Host_Human"
1785 },
1786 "gb_MW586849_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_PA_QDX_4292_2021_Segment_null_Host_Human":{
1787 "Global MG94xREV":0.005620567293737872,
1788 "Nucleotide GTR":0.005502668168648675,
1789 "original name":"gb_MW586849_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_PA_QDX_4292_2021_Segment_null_Host_Human"
1790 },
1791 "gb_MW592637_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_MA_MASPHL_01774_2021_Segment_null_Host_Human":{
1792 "Global MG94xREV":0.00562424608287987,
1793 "Nucleotide GTR":0.005540034388759709,
1794 "original name":"gb_MW592637_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_MA_MASPHL_01774_2021_Segment_null_Host_Human"
1795 },
1796 "gb_MW592782_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_MN_MDH_2311_2020_Segment_null_Host_Human":{
1797 "Global MG94xREV":0.1007052990360331,
1798 "Nucleotide GTR":0.09915769560357757,
1799 "original name":"gb_MW592782_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_MN_MDH_2311_2020_Segment_null_Host_Human"
1800 },
1801 "gb_MW593179_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_FHCRC_1171_2020_Segment_null_Host_Human":{
1802 "Global MG94xREV":0.005595436621876556,
1803 "Nucleotide GTR":0.005472493519678674,
1804 "original name":"gb_MW593179_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_FHCRC_1171_2020_Segment_null_Host_Human"
1805 },
1806 "gb_MW593378_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_FHCRC_8518_2020_Segment_null_Host_Human":{
1807 "Global MG94xREV":0.005697283165818841,
1808 "Nucleotide GTR":0.005541823687839101,
1809 "original name":"gb_MW593378_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_FHCRC_8518_2020_Segment_null_Host_Human"
1810 },
1811 "gb_MW593611_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_FHCRC_7938_2020_Segment_null_Host_Human":{
1812 "Global MG94xREV":0.00571537194207626,
1813 "Nucleotide GTR":0.005549275574329782,
1814 "original name":"gb_MW593611_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_FHCRC_7938_2020_Segment_null_Host_Human"
1815 },
1816 "gb_MW593708_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_FHCRC_4325_2020_Segment_null_Host_Human":{
1817 "Global MG94xREV":0.01699151951028365,
1818 "Nucleotide GTR":0.01664980103071093,
1819 "original name":"gb_MW593708_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_FHCRC_4325_2020_Segment_null_Host_Human"
1820 },
1821 "gb_MW596234_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_LA_CDC_STM_000008248_2021_Segment_null_Host_Human":{
1822 "Global MG94xREV":0,
1823 "Nucleotide GTR":0,
1824 "original name":"gb_MW596234_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_LA_CDC_STM_000008248_2021_Segment_null_Host_Human"
1825 },
1826 "gb_MW598427_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_GHA_nmimr_SARS_CoV_2_NTRA_15010_2020_Segment_null_Host_Human":{
1827 "Global MG94xREV":0.005601039300854873,
1828 "Nucleotide GTR":0.005472270976472237,
1829 "original name":"gb_MW598427_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_GHA_nmimr_SARS_CoV_2_NTRA_15010_2020_Segment_null_Host_Human"
1830 },
1831 "gb_MW599514_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_MA_Broad_CRSP_00376_2021_Segment_null_Host_Human":{
1832 "Global MG94xREV":0.00559703102947049,
1833 "Nucleotide GTR":0.005474054043185261,
1834 "original name":"gb_MW599514_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_MA_Broad_CRSP_00376_2021_Segment_null_Host_Human"
1835 },
1836 "gb_MW599662_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_RI_Broad_RIDOH_00108_2020_Segment_null_Host_Human":{
1837 "Global MG94xREV":0.00556465001233492,
1838 "Nucleotide GTR":0.005445793699725887,
1839 "original name":"gb_MW599662_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_RI_Broad_RIDOH_00108_2020_Segment_null_Host_Human"
1840 }
1841 },
1842 "attributes":{
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1847 "EBF site 10 (partition 1)":{
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1851 "EBF site 11 (partition 1)":{
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1855 "EBF site 12 (partition 1)":{
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1859 "EBF site 13 (partition 1)":{
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1863 "EBF site 14 (partition 1)":{
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1887 "EBF site 2 (partition 1)":{
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1907 "EBF site 25 (partition 1)":{
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1927 "EBF site 3 (partition 1)":{
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1931 "EBF site 30 (partition 1)":{
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1935 "EBF site 31 (partition 1)":{
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1939 "EBF site 32 (partition 1)":{
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1943 "EBF site 33 (partition 1)":{
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1947 "EBF site 34 (partition 1)":{
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1951 "EBF site 35 (partition 1)":{
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1955 "EBF site 36 (partition 1)":{
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1959 "EBF site 37 (partition 1)":{
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1963 "EBF site 38 (partition 1)":{
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1967 "EBF site 39 (partition 1)":{
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1971 "EBF site 4 (partition 1)":{
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1975 "EBF site 40 (partition 1)":{
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1979 "EBF site 41 (partition 1)":{
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1983 "EBF site 42 (partition 1)":{
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1987 "EBF site 43 (partition 1)":{
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1991 "EBF site 44 (partition 1)":{
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1995 "EBF site 45 (partition 1)":{
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1999 "EBF site 46 (partition 1)":{
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2003 "EBF site 47 (partition 1)":{
2004 "attribute type":"branch label",
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2006 },
2007 "EBF site 48 (partition 1)":{
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2010 },
2011 "EBF site 49 (partition 1)":{
2012 "attribute type":"branch label",
2013 "display order":63
2014 },
2015 "EBF site 5 (partition 1)":{
2016 "attribute type":"branch label",
2017 "display order":63
2018 },
2019 "EBF site 50 (partition 1)":{
2020 "attribute type":"branch label",
2021 "display order":63
2022 },
2023 "EBF site 51 (partition 1)":{
2024 "attribute type":"branch label",
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2026 },
2027 "EBF site 52 (partition 1)":{
2028 "attribute type":"branch label",
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2030 },
2031 "EBF site 53 (partition 1)":{
2032 "attribute type":"branch label",
2033 "display order":63
2034 },
2035 "EBF site 54 (partition 1)":{
2036 "attribute type":"branch label",
2037 "display order":63
2038 },
2039 "EBF site 55 (partition 1)":{
2040 "attribute type":"branch label",
2041 "display order":63
2042 },
2043 "EBF site 56 (partition 1)":{
2044 "attribute type":"branch label",
2045 "display order":63
2046 },
2047 "EBF site 57 (partition 1)":{
2048 "attribute type":"branch label",
2049 "display order":63
2050 },
2051 "EBF site 58 (partition 1)":{
2052 "attribute type":"branch label",
2053 "display order":63
2054 },
2055 "EBF site 59 (partition 1)":{
2056 "attribute type":"branch label",
2057 "display order":63
2058 },
2059 "EBF site 6 (partition 1)":{
2060 "attribute type":"branch label",
2061 "display order":63
2062 },
2063 "EBF site 60 (partition 1)":{
2064 "attribute type":"branch label",
2065 "display order":63
2066 },
2067 "EBF site 61 (partition 1)":{
2068 "attribute type":"branch label",
2069 "display order":63
2070 },
2071 "EBF site 7 (partition 1)":{
2072 "attribute type":"branch label",
2073 "display order":63
2074 },
2075 "EBF site 8 (partition 1)":{
2076 "attribute type":"branch label",
2077 "display order":63
2078 },
2079 "EBF site 9 (partition 1)":{
2080 "attribute type":"branch label",
2081 "display order":63
2082 },
2083 "Global MG94xREV":{
2084 "attribute type":"branch length",
2085 "display order":1
2086 },
2087 "Nucleotide GTR":{
2088 "attribute type":"branch length",
2089 "display order":0
2090 },
2091 "original name":{
2092 "attribute type":"node label",
2093 "display order":-1
2094 }
2095 }
2096 },
2097 "data partitions":{
2098 "0":{
2099 "coverage": [
2100 [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60]
2101 ],
2102 "name":"meme.filter.default"
2103 }
2104 },
2105 "fits":{
2106 "Global MG94xREV":{
2107 "AIC-c":3543.90202757597,
2108 "Equilibrium frequencies": [
2109 [0.05234569963398239],
2110 [0.01820144287559587],
2111 [0.03171602008431205],
2112 [0.06431149409766418],
2113 [0.01800320654271072],
2114 [0.006260004885902283],
2115 [0.01090806053378164],
2116 [0.02211859081846959],
2117 [0.004535586108948101],
2118 [0.001577096343092366],
2119 [0.002748090886765758],
2120 [0.005572383621093118],
2121 [0.05376506840134722],
2122 [0.01869498025725739],
2123 [0.03257600913112123],
2124 [0.06605531883862786],
2125 [0.02101229581979642],
2126 [0.007306313693835135],
2127 [0.01273125396924738],
2128 [0.02581553304363397],
2129 [0.007226738857737038],
2130 [0.002512853499250144],
2131 [0.004378648033338527],
2132 [0.008878711654338001],
2133 [0.001820647688420749],
2134 [0.0006330685257641059],
2135 [0.001103122110434494],
2136 [0.002236832708064217],
2137 [0.02158205029104791],
2138 [0.00750442650031422],
2139 [0.01307646559846798],
2140 [0.02651552867978401],
2141 [0.02716448109998729],
2142 [0.009445527606734685],
2143 [0.01645883490279689],
2144 [0.03337405705040597],
2145 [0.009342654072602125],
2146 [0.003248591299723995],
2147 [0.005660671388086015],
2148 [0.01147830760593387],
2149 [0.002353714708092291],
2150 [0.0008184245144176013],
2151 [0.00142610498047739],
2152 [0.002891754444309577],
2153 [0.02790105385237369],
2154 [0.009701645816444848],
2155 [0.01690512096586593],
2156 [0.03427900424852968],
2157 [0.01213232883613678],
2158 [0.04286738143063773],
2159 [0.01200019269757509],
2160 [0.004172660283620678],
2161 [0.007270861890722063],
2162 [0.01474333760437351],
2163 [0.001051227178605695],
2164 [0.001831763697950316],
2165 [0.003714320395052258],
2166 [0.03583757036191434],
2167 [0.01246130043735373],
2168 [0.02171382003333725],
2169 [0.04402974286179266]
2170 ],
2171 "Log Likelihood":-1537.966628437365,
2172 "Rate Distributions":{
2173 "non-synonymous/synonymous rate ratio for *background*": [
2174 [0.7611967859695254, 1]
2175 ],
2176 "non-synonymous/synonymous rate ratio for *test*": [
2177 [1.176519935855233, 1]
2178 ]
2179 },
2180 "display order":1,
2181 "estimated parameters":229
2182 },
2183 "Nucleotide GTR":{
2184 "AIC-c":3816.670733777944,
2185 "Equilibrium frequencies": [
2186 [0.3597004301674249],
2187 [0.142728932627735],
2188 [0.1424194596601987],
2189 [0.3551511775446415]
2190 ],
2191 "Log Likelihood":-1545.300525641431,
2192 "Rate Distributions":{
2193 "Substitution rate from nucleotide A to nucleotide C":0.4395430104915295,
2194 "Substitution rate from nucleotide A to nucleotide G":1,
2195 "Substitution rate from nucleotide A to nucleotide T":0.1216209022619113,
2196 "Substitution rate from nucleotide C to nucleotide G":0.1952279380624755,
2197 "Substitution rate from nucleotide C to nucleotide T":1.466497674587222,
2198 "Substitution rate from nucleotide G to nucleotide T":0.7918204256778225
2199 },
2200 "display order":0,
2201 "estimated parameters":359
2202 }
2203 },
2204 "input":{
2205 "file name":"/home/aglucaci/SARS-CoV-2/clades/B-1-617/ORF6.combined.fas",
2206 "number of sequences":177,
2207 "number of sites":61,
2208 "partition count":1,
2209 "trees":{
2210 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2211 }
2212 },
2213 "tested":{
2214 "0":{
2215 "Node100":"background",
2216 "Node112":"background",
2217 "Node115":"background",
2218 "Node119":"background",
2219 "Node172":"background",
2220 "Node177":"background",
2221 "Node184":"background",
2222 "Node194":"background",
2223 "Node198":"background",
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2227 "Node226":"background",
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2233 "Node245":"background",
2234 "Node252":"background",
2235 "Node258":"background",
2236 "Node260":"background",
2237 "Node264":"background",
2238 "Node283":"background",
2239 "Node290":"background",
2240 "Node292":"background",
2241 "Node319":"background",
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2245 "Node338":"background",
2246 "Node342":"background",
2247 "Node36":"background",
2248 "Node57":"background",
2249 "Node62":"background",
2250 "Node71":"background",
2251 "REFERENCE":"background",
2252 "epi_isl_1181694_hCoV_19_USA_DE_DHSS_B1064373_2021":"test",
2253 "epi_isl_1284652_hCoV_19_Germany_SN_RKI_I_038291_2021":"test",
2254 "epi_isl_1442952_hCoV_19_Singapore_321_2021":"test",
2255 "epi_isl_1470937_hCoV_19_USA_NY_PRL_2021_03_29_01C17_2021":"test",
2256 "epi_isl_1512225_hCoV_19_USA_GA_CDC_STM_000041012_2021":"test",
2257 "epi_isl_1516887_hCoV_19_Australia_QLD1826_2021":"test",
2258 "epi_isl_1533793_hCoV_19_India_MH_NCCS_CHN21027888_2021":"test",
2259 "epi_isl_1533799_hCoV_19_India_MH_NCCS_9947_2021":"test",
2260 "epi_isl_1543980_hCoV_19_Singapore_490_2021":"test",
2261 "epi_isl_1589923_hCoV_19_India_WB_1930300571091_2021":"test",
2262 "epi_isl_1589926_hCoV_19_India_WB_1930300586246_2021":"test",
2263 "epi_isl_1631286_hCoV_19_England_CAMC_14E7527_2021":"test",
2264 "gb_LC571023_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_DP0724_Segment_null_Host_Human":"background",
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2266 "gb_MT358638_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_DEU_FFM1_2020_Segment_null_Host_Human":"background",
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2268 "gb_MT447156_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_THA_SI200383_NT_2020_Segment_null_Host_Human":"background",
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2273 "gb_MT601276_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_BGD_BCSIR_NILMRC_52_2020_Segment_null_Host_Human":"background",
2274 "gb_MT601281_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_BGD_BCSIR_NILMRC_67_2020_Segment_null_Host_Human":"background",
2275 "gb_MT612186_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_AUS_VIC1576_2020_Segment_null_Host_Human":"background",
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