Mercurial > repos > iuc > hyphy_fubar
comparison macros.xml @ 3:b73b35db4664 draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit f14f2bae2b27dc04e574803c7d4442a64cfe43e4"
| author | iuc |
|---|---|
| date | Fri, 14 Feb 2020 16:45:00 -0500 |
| parents | 6943fbec145c |
| children | 93a0cf4ea5fc |
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| 2:6943fbec145c | 3:b73b35db4664 |
|---|---|
| 78 <requirement type="package" version="@VERSION@"> | 78 <requirement type="package" version="@VERSION@"> |
| 79 hyphy</requirement> | 79 hyphy</requirement> |
| 80 <yield/> | 80 <yield/> |
| 81 </requirements> | 81 </requirements> |
| 82 </xml> | 82 </xml> |
| 83 <token name="@HYPHYMPI@">mpirun -np \${GALAXY_SLOTS:-1} HYPHYMPI</token> | |
| 83 <token name="@HYPHY_ENVIRONMENT@"><![CDATA[export HYPHY=`which hyphy` && | 84 <token name="@HYPHY_ENVIRONMENT@"><![CDATA[export HYPHY=`which hyphy` && |
| 84 export HYPHY_PATH=`dirname \$HYPHY` && | 85 export HYPHY_PATH=`dirname \$HYPHY` && |
| 85 export HYPHY_LIB=`readlink -f \$HYPHY_PATH/../lib/hyphy` &&]]></token> | 86 export HYPHY_LIB=`readlink -f \$HYPHY_PATH/../lib/hyphy` &&]]></token> |
| 86 <token name="@HYPHY_INVOCATION@"><![CDATA[@HYPHY_ENVIRONMENT@ hyphy LIBPATH=\$HYPHY_LIB ]]></token> | 87 <token name="@HYPHY_INVOCATION@"><![CDATA[@HYPHY_ENVIRONMENT@ hyphy LIBPATH=\$HYPHY_LIB ]]></token> |
| 87 </macros> | 88 </macros> |