comparison macros.xml @ 13:ff1e9dd7ad13 draft

"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2413d0043c5d263ecfa75ec0f8614e322fb65f99"

12:37f6c6344193

            code</option>
            <option value="Blepharisma-Nuclear">Blepharisma Nuclear
            code</option>
        </param>
    </xml>
    <xml name="branches">
        <param name="branches" type="select" label="Set of branches to test">
            <option value="All">All branches</option>
            <option value="Internal">Internal branches</option>
            <option value="Leaves">Leaf branches</option>

        <citations>
            <citation type="doi">10.1093/molbev/msz197</citation>
            <yield/>
        </citations>
    </xml>
    <token name="@VERSION@">2.5.12</token>
    <xml name="requirements">
        <requirements>
            <requirement type="package" version="@VERSION@">hyphy</requirement>
            <yield/>
        </requirements>

        exit \$EC
    ]]></token>
    <token name="@HYPHY_ENVIRONMENT@"><![CDATA[
        export HYPHY=`which hyphy` &&
        export HYPHY_PATH=`dirname \$HYPHY` &&
        export HYPHY_LIB=`readlink -f \$HYPHY_PATH/../lib/hyphy` &&]]></token>
    <token name="@HYPHY_INVOCATION@"><![CDATA[
        @HYPHY_ENVIRONMENT@ hyphy LIBPATH=\$HYPHY_LIB
    ]]></token>
</macros>

13:ff1e9dd7ad13

            code</option>
            <option value="Blepharisma-Nuclear">Blepharisma Nuclear
            code</option>
        </param>
    </xml>

    <xml name="branches">
        <param name="branches" type="select" label="Set of branches to test">
            <option value="All">All branches</option>
            <option value="Internal">Internal branches</option>
            <option value="Leaves">Leaf branches</option>

        <citations>
            <citation type="doi">10.1093/molbev/msz197</citation>
            <yield/>
        </citations>
    </xml>
    <token name="@VERSION@">2.5.14</token>
    <xml name="requirements">
        <requirements>
            <requirement type="package" version="@VERSION@">hyphy</requirement>
            <yield/>
        </requirements>

        exit \$EC
    ]]></token>
    <token name="@HYPHY_ENVIRONMENT@"><![CDATA[
        export HYPHY=`which hyphy` &&
        export HYPHY_PATH=`dirname \$HYPHY` &&
        export HYPHY_LIB=`readlink -f \$HYPHY_PATH/../share/hyphy` &&]]></token>
    <token name="@HYPHY_INVOCATION@"><![CDATA[
        @HYPHY_ENVIRONMENT@ hyphy LIBPATH=\$HYPHY_LIB
    ]]></token>
</macros>