Mercurial > repos > iuc > hyphy_fubar

diff macros.xml @ 5:bece0bad8e89 draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit e31ca8967662206fc17d608efea398502569437a"
author iuc
date Mon, 17 Feb 2020 14:52:11 -0500
parents 93a0cf4ea5fc
children 3285fd1f4bde
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line diff
--- a/macros.xml	Sun Feb 16 00:01:38 2020 -0500
+++ b/macros.xml	Mon Feb 17 14:52:11 2020 -0500
@@ -80,7 +80,7 @@
             <yield/>
         </requirements>
     </xml>
-    <token name="@HYPHYMPI@">mpirun -np \${GALAXY_SLOTS:-1} HYPHYMPI</token>
+    <token name="@HYPHYMPI@">\${GALAXY_MPIRUN:-mpirun -np \${GALAXY_SLOTS:-1}} HYPHYMPI</token>
     <token name="@HYPHY_ENVIRONMENT@"><![CDATA[export HYPHY=`which hyphy` &&
 export HYPHY_PATH=`dirname \$HYPHY` &&
 export HYPHY_LIB=`readlink -f \$HYPHY_PATH/../lib/hyphy` &&]]></token>