Mercurial > repos > iuc > hyphy_fubar
changeset 6:3285fd1f4bde draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 8d5ae1d04c43988fdcc458f4f08376a15e72db8e"
| author | iuc |
|---|---|
| date | Thu, 20 Feb 2020 18:10:47 -0500 |
| parents | bece0bad8e89 |
| children | ce53071d60a9 |
| files | hyphy_fubar.xml macros.xml test-data/gard-in1.fa test-data/gard-out1.nex test-data/meme-in1.fa test-data/meme-in1.nhx test-data/meme-out1.json |
| diffstat | 7 files changed, 1084 insertions(+), 5351 deletions(-) [+] |
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--- a/hyphy_fubar.xml Mon Feb 17 14:52:11 2020 -0500 +++ b/hyphy_fubar.xml Thu Feb 20 18:10:47 2020 -0500 @@ -12,29 +12,19 @@ --alignment ./fubar_input.fa --tree ./fubar_input.nhx --code '$gencodeid' - --method '$posterior' + --method '$posteriorEstimationMethod.method' --grid '$grid_points' - --chains '$mcmc' - --chain-length '$chain_length' - --burn-in '$samples' - --samples '$samples_per_chain' + @posteriorEstimationMethod_cmd@ --concentration_parameter '$concentration' > '$fubar_log' ]]></command> <inputs> <expand macro="inputs"/> <expand macro="gencode"/> - <param name="grid_points" type="integer" value="20" min="5" max="50" label="Grid points"/> - <param name="posterior" type="select" label="Posterior estimation method"> - <option value="Metropolis-Hastings">Full Metropolis-Hastings MCMC algorithm</option> - <option value="Collapsed-Gibbs">Collapsed Gibbs sampler</option> - <option value="Variational-Bayes">0-th order Variational Bayes approximations</option> - </param> - <param name="mcmc" type="integer" value="5" min="2" max="20" label="Number of MCMC chains"/> - <param name="chain_length" type="integer" value="2000000" min="500000" max="50000000" label="Length of each chain"/> - <param name="samples" type="integer" value="1000000" min="100000" max="1900000" label="Samples to use for burn-in"/> - <param name="samples_per_chain" type="integer" value="100" min="50" max="1000000" label="Samples to draw from each chain"/> - <param name="concentration" type="float" value="0.5" min="0.001" max="1" label="Concentration parameter of the Dirichlet prior"/> + <param argument="--grid" name="grid_points" type="integer" value="20" min="5" max="50" label="Grid points" /> + <expand macro="conditional_posteriorEstimationMethod" /> + <param argument="--concentration_parameter" name="concentration" type="float" value="0.5" min="0.001" max="1" label="Concentration parameter of the Dirichlet prior" /> + </inputs> <outputs> <data name="fubar_log" format="txt"/> @@ -49,13 +39,91 @@ </test> </tests> <help><![CDATA[ -Model-based selection analyses (such as those performed by PAML and HyPhy) can be slow, becoming impractical for large alignments. We present a method to model and detect selection much faster than existing methods and to leverage Bayesian MCMC to robustly account for parameter estimation errors. + +FUBAR : Faste Unbiased Bayesian AppRoximation +============================================= + +What question does this method answer? +-------------------------------------- + +Which site(s) in a gene are subject to pervasive, i.e. consistently across the entire phylogeny, diversifying selection? + +Recommended Applications +------------------------ + +The phenomenon of pervasive selection is generally most prevalent in pathogen evolution and any biological system influenced by evolutionary arms race dynamics +(or balancing selection), including adaptive immune escape by viruses. As such, FUBAR is ideally suited to identify sites under positive selection which +represent candidate sites subject to strong selective pressures across the entire phylogeny. + +FUBAR is our recommended method for detecting pervasive selection at individual sites on large (> 500 sequences) datasets for which other methods have prohibitive runtimes, unless you have access to a computer cluster. + +Brief description +----------------- -Results: By exploiting some commonly used approximations, FUBAR can perform detection of positive selection under a model that allows rich site- to-site rate variation about 30 to 50 times faster than existing random effects likelihood methods, and 10 to 30 times faster than existing fixed effects likelihood methods. We introduce an ultra-fast MCMC routine that allows a flexible prior specification, with no parametric constraints on the prior shape. Furthermore, our method allows us to visualize Bayesian inference for each site, revealing the model supported by the data. +Perform a Fast Unbiased AppRoximate Bayesian (FUBAR) analysis of a +coding sequence alignment to determine whether some sites have been +subject to pervasive purifying or diversifying selection. There are three methods +for estimating the posterior distribution of +grid weights: collapsed Gibbs MCMC (faster), 0-th order Variation +Bayes approximation (fastest), full Metropolis-Hastings (slowest). + +Input +----- + +1. A *FASTA* sequence alignment. +2. A phylogenetic tree in the *Newick* format + +Note: the names of sequences in the alignment must match the names of the sequences in the tree. + + +Output +------ + +A JSON file with analysis results (http://hyphy.org/resources/json-fields.pdf). -See the online documentation_ for more information. +A custom visualization module for viewing these results is available (see http://vision.hyphy.org/FUBAR for an example) + +Further reading +--------------- + +http://hyphy.org/methods/selection-methods/#FUBAR + + +Tool options +------------ +:: + + + --code Which genetic code to use + + --grid The number of grid points + Smaller : faster + Larger : more precise posterior estimation but slower + default value: 20 -.. _documentation: http://hyphy.org/methods/selection-methods/#fubar + --method Inference method to use + Variational-Bayes : 0-th order Variational Bayes approximation; fastest [default] + Metropolis-Hastings : Full Metropolis-Hastings MCMC algorithm; orignal method [slowest] + Collapsed-Gibbs : Collapsed Gibbs sampler [intermediate speed] + + + --chains How many MCMC chains to run (does not apply to Variational-Bayes) + default value: 5 + + --chain-length MCMC chain length (does not apply to Variational-Bayes) + default value: 2,000,000 + + --burn-in MCMC chain burn in (does not apply to Variational-Bayes) + default value: 1,000,000 + + --samples MCMC samples to draw (does not apply to Variational-Bayes) + default value: 1,000 + + --concentration_parameter + The concentration parameter of the Dirichlet prior + default value: 0.5 + + ]]></help> <expand macro="citations"> <citation type="doi">10.1093/molbev/mst030</citation>
--- a/macros.xml Mon Feb 17 14:52:11 2020 -0500 +++ b/macros.xml Thu Feb 20 18:10:47 2020 -0500 @@ -6,6 +6,8 @@ </xml> <xml name="substitution"> <param name="model" type="select" label="Substitution model"> + <option value="GTR">GTR - General time reversible + model</option> <option value="LG">LG - Generalist empirical model from Le and Gascuel (2008)</option> <option value="HIVBm">HIVBm - Specialist empirical model @@ -26,10 +28,43 @@ for invertebrate mitochondrial genomes</option> <option value="gcpREV">gcpREV - Specialist empirical model for green plant chloroplast genomes</option> - <option value="GTR">GTR - General time reversible - model</option> </param> </xml> + + <xml name="conditional_posteriorEstimationMethod"> + <conditional name="posteriorEstimationMethod"> + <param argument="--method" type="select" label="Posterior estimation method"> + <option value="Variational-Bayes">0-th order Variational Bayes approximation</option> + <option value="Metropolis-Hastings">Full Metropolis-Hastings MCMC algorithm</option> + <option value="Collapsed-Gibbs">Collapsed Gibbs sampler</option> + </param> + <when value="Variational-Bayes"> + </when> + <when value="Metropolis-Hastings"> + <expand macro="mcmc_options" /> + </when> + <when value="Collapsed-Gibbs"> + <expand macro="mcmc_options" /> + </when> + </conditional> + </xml> + + <token name="@posteriorEstimationMethod_cmd@"> + #if $posteriorEstimationMethod.method != "Variational-Bayes" + --chains '$posteriorEstimationMethod.chains' + --chain-length '$posteriorEstimationMethod.chain_length' + --burn-in '$posteriorEstimationMethod.samples' + --samples '$posteriorEstimationMethod.samples_per_chain' + #end if + </token> + + <xml name="mcmc_options"> + <param argument="--chains" type="integer" value="5" min="2" max="20" label="Number of MCMC chains" /> + <param argument="--chain-length" name="chain_length" type="integer" value="2000000" min="500000" max="50000000" label="Length of each chain" /> + <param argument="--burn-in" name="samples" type="integer" value="1000000" min="100000" max="1900000" label="Samples to use for burn-in" /> + <param argument="--samples" name="samples_per_chain" type="integer" value="100" min="50" max="1000000" label="Samples to draw from each chain" /> + </xml> + <xml name="gencode"> <param name="gencodeid" type="select" label="Genetic code"> <option value="Universal">Universal code</option> @@ -62,27 +97,28 @@ <option value="All">All branches</option> <option value="Internal">Internal branches</option> <option value="Leaves">Leaf branches</option> - <option value="'Unlabeled-branches'">Unlabeled - branches</option> + <option value="'Unlabeled-branches'">Unlabeled branches</option> </param> </xml> <xml name="citations"> <citations> - <citation type="doi">10.1093/bioinformatics/bti079</citation> + <citation type="doi">10.1093/molbev/msz197</citation> <yield/> </citations> </xml> - <token name="@VERSION@">2.5.3</token> + <token name="@VERSION@">2.5.4</token> <xml name="requirements"> <requirements> - <requirement type="package" version="@VERSION@"> - hyphy</requirement> + <requirement type="package" version="@VERSION@">hyphy</requirement> <yield/> </requirements> </xml> <token name="@HYPHYMPI@">\${GALAXY_MPIRUN:-mpirun -np \${GALAXY_SLOTS:-1}} HYPHYMPI</token> - <token name="@HYPHY_ENVIRONMENT@"><![CDATA[export HYPHY=`which hyphy` && -export HYPHY_PATH=`dirname \$HYPHY` && -export HYPHY_LIB=`readlink -f \$HYPHY_PATH/../lib/hyphy` &&]]></token> - <token name="@HYPHY_INVOCATION@"><![CDATA[@HYPHY_ENVIRONMENT@ hyphy LIBPATH=\$HYPHY_LIB ]]></token> + <token name="@HYPHY_ENVIRONMENT@"><![CDATA[ + export HYPHY=`which hyphy` && + export HYPHY_PATH=`dirname \$HYPHY` && + export HYPHY_LIB=`readlink -f \$HYPHY_PATH/../lib/hyphy` &&]]></token> + <token name="@HYPHY_INVOCATION@"><![CDATA[ + @HYPHY_ENVIRONMENT@ hyphy LIBPATH=\$HYPHY_LIB + ]]></token> </macros>
--- a/test-data/gard-in1.fa Mon Feb 17 14:52:11 2020 -0500 +++ b/test-data/gard-in1.fa Thu Feb 20 18:10:47 2020 -0500 @@ -1,735 +1,120 @@ ->TREESPARROW_HENAN_1_2004 -ATGGAGAAAATAGTGCTTCTTCGTGCAATGATCAATCTTGTTAAAAGTGA -TCAGATTGGCGTTGGTTACCATGCAGACTACTCGACAGAGCAGGGTGACA -CAATAATGGAAAAGAACGTTACTGTTACACATGCTCAAGACATATTGGAA -AAGACACACAACGGGAAGCTCTGCGACCTAGATGGAGTGAAGCCTCTAAT -TTTGAAAGATTGTAGTGTAGCTGGATGGCTCCTCGGAAACCCAATGTGTG -ACGAATTCATCAATGTGCCGGAGTGGTCTTACATAGTGGAGAAGGCCAGT -CCAGCCAATGACCTCTGTTACCCAGGGGATTTCAACGACTATGAAGAACT -GAAACACCTATTGAGCAGAATAAACCATTTTGAAAAAATTCAGATCATCC -CCAAAAGTTCTTGGTCCGATCATGAAGCCTCATCAGGGGTGAGCTCAGCA -TGTCCATACCTGGGGAAGCCCTCCTTTTTCAGAAATGTGGTATGGCTTAT -CAAAAAGAACAGTACATACCCAACAATAAAGAGGGGCTACAATAATACCA -ACCCAGAAGATCTTTTGGTACTGTGGGGGATTCACCATCCTAATGATGCG -GCAGAGCAGATAAAGCTCTATCAAAACCCAACCACCTATATTTCCGTTGG -AACATCAACACTAAACCAGAGATTGGTACCAAAAATAGCTACTAGATCCA -AAGTAAATGGGCAAAGTGGAAGAATGGAGTTCTTCTGGACAATTTTAAAG -CCGAATGACGCTATCAACTTCGAGAGTAATGGAAATTTCATTGCTCCAGA -ATATGCATACCAAATTGTCAAGAAAGGGGACTCAGCAATTATGAAAAGTG -AATTGGAATATGGTAACTGCAACACCAAGTGTCAAACTCCAATGGGGGCG -ATAAACTCTAGTATGCCATTCCACAACATACACCCTCTCACCATCGGGGA -ATGCCCCAAATATGTGAAATCAAACAGATTAGTCCTTGCGACAGGGCTCA -GAAATAGCCCTCAAAGAGAGAGAAGAAGAAAAAAGAGAGGACTATTTGGA -GCTATAGCAGGTTTTATAGAGGGAGGATGGCAGGGAATGGTAGATGGTTG -GTATGGGTACCACCATAGCAATGAGCAGGGGAGTGGATACGCTGCAGACA -AAGAATCCACTCAAAAAGCAATAGATGGAGTCACCAATAAGGTCAACTCG -ATCATTGACAAAATGAACACTCAGTTTGAGGCCGTTGGAAGGGAATTTAA -TAACTTAGAAAGGAGAATAGAAAATTTAAACAAGAAGATGGAGGACGGAT -TCCTAGATGTCTGGACTTATAATGCTGAACTTCTGGTTCTCATGGAAAAT -GAGAGAACTCTAGACTTTCATGACTCAAATGTCAAGAACCTTTACGAAAA -GGTCCGACTACAACTTAGGGATAATGCAAAGGAGCTGGGTAACGGTTGTT -TCGAGTTCTATCACAAATGTGATAATGAATGTATGGAAAGTGTAAAAAAC -GGAACGTATGACTACCCGCAGTATTCAGAAGAAGCAAGACTAAACAGAGA -GGAAATAAGTGGAGTAAAATTGGAATCAATAGGAACTTACCAAATACTGT -CAATTTATTCAACAGTGGCGAGTTCCCTAGCACTGGCAATCATGGTAGCT -GGTCTATCTTTATGGATGTGCTCCAATGGATCGTTACAATGCAGAATT ->HUMAN_VIETNAM_CL105_2005 -ATGGAGAAAATAGTGCTTCTTTTTGCGATAGTCAGTCTTGTTAAAAGTGA -TCAGATTTGCATTGGTTACCATGCAAACAACTCGACAGAGCAGGTTGACA -CAATAATGGAAAAGAACGTTACTGTTACACATGCCCAAGACATACTGGAA -AAGACACACAACGGGAAGCTCTGCGATCTAGATGGAGTGAAGCCTCTAAT -TTTGAGAGATTGTAGTGTAGCTGGATGGCTACTCGGAAACCCAATGTGTG -ACGAATTCATCAATGTGCCGGAATGGTCTTACATAGTGGAGAAGGTCAAT -CCAGTCAATGACCTCTGTTACCCAGGGGTTTTCAATGACTATGAAGAATT -GAAACACCTATTGAGCAGAATAAACCATTTTGAGAAAATTCAGATCATCC -CCAAAAGTTCTTGGTCCAGTCATGAAGCCTCATTAGGGGTGAGCTCAGTA -TGTCCATACCAGGGAAAGTCCTCCTTTTTCAGAAATGTGGTATGGCTTAT -CAAAAAGAACAGTACATACCCAACAATAAAGAGGAGCTACAATAATACCA -ACCAAGAAGATCTTTTGGTAATATGGGGGATTCATCATCCTAATGATGCG -GCAGAGCAGATAAAGCTCTATCAAAACCCAACCACCTATATTTCCGTTGG -GACATCAACACTAAACCAGAGATTGGTACCAAGAATAGCTACTAGATCCA -AAGTAAACGGGCAAAGTGGGAGGATGGAGTTCTTCTGGACAATTTTAAAA -CCGAATGATGCAATCAACTTCGAGAGTAATGGAAATTTCATTGCTCCAGA -ATATGCATACAAGATTGTCAAGAAAGGGGACTCAACAATTATGAAAAGTG -AATTGGAATATGGTAACTGCAACACCAAGTGTCAAACTCCAATGGGGGCG -ATAAACTCTAGTATGCCATTCCACAATATACACCCTCTCACCATCGGGGA -ATGCCCCAAATATGTGAAATCAAACAGATTAGTCCTTGCGACTGGGCTCA -GAAATAGCCCTCAAAAAGAGAGAAGAAGAAAAAAGAGAGGATTATTTGGA -GCTATAGCAGGTTTTATAGAGGGAGGATGGCAGGGAATGGTAGATGGTTG -GTATGGGTACCACCATAGCAATGAGCAGGGGAGTGGGTACGCTGCAGACA -AAGAATCCACTCAAAAGGCAATAGATGGAGTCACCAATAAGGTCAACTCG -ATCATTGACAAAATGAACACTCAGTTTGAGGCCGTTGGAAGGGAATTTAA -CAACTTAGAAAGGAGAATAGAGAATTTAAACAAGAAGATGGAAGACGGGT -TCCTAGATGTCTGGACTTATAATGCTGAACTTCTGGTTCTCATGGAAAAT -GAGAGAACTCTAGACTTTCATGACTCAAATGTCAAGAACCTTTACGACAA -GGTCCGACTACAGCTTAGGGATAATGCAAAGGAGCTGGGTAACGGTTGTT -TCGAGTTCTATCATAAATGTGATAATGAATGTATGGAAAGTGTAAGAAAC -GGAACGTATGACTACCCGCAGTATTCAGAAGAAGCAAGATTAAAAAGAGA -GGAAATAAGTGGAGTAAAATTGGAATCAATAGGAATTTACCAAATACTGT -CAATTTATTCTACAGTGGCGAGTTCCCTAGCACTGGCAATCATGATAGCT -GGTCTATCCTTATGGATGTGCTCCAATGGGTCGTTACAA--------- ->TREESPARROW_HENAN_4_2004 -ATGGAGAAAATAGTGCTTCTTCTTGCAATAGTCAGTCTTGTTAAAAGTGA -TCAGATTTGCATTGGTTACCATGCAAACAACTCGACAGAGCAGGTTGACA -CAATAATGCAAAAGAACGTTACTGTTACACATGCCCAAGACATACTGGAA -AAGACACACAACGGGAAGCTCTGCGATCTAGATGGAGTGAAACCTCTAAT -TTTAAGAGATTGTAGTGTAGCTGGATGGCTCCTCGGAAACCCAATGTGTG -ACGAATTCATCAATGTGCCGGAATGGTCTTACATAGTGGAGAAGGCCAGT -CCAGCCAATGACCTCTGTTACCCAGGGGATTTCAACGACTATGAAGAACT -GAAACACCTATTGAGCAGAATAAACCATTTTGAGAAAATTCAGATCATCC -CCAAAAGTTCTTGGTCCGATCATGAAGCCTCATCAGGGGTGAGCTCAGCA -TGTCCATACCAGGGGAGTCCCTCCTTTTTCAGAAATGTGGTATGGCTTAT -CAAAAAGAACAGTGCATACCCAACAATAAAGAGGAGCTACAATAATACCA -ACCAAGAAGATCTTTTGGTACTGTGGGGGATTCACCATCCTAATGATGCG -GCAGAGCAGACAAAGCTCTATCAAAACCCAACCACCTATATTTCCGTTGG -AACATCAACACTAAACCAGAGATTGGTACCAAAAATAGCTACTAGATCCA -AAGTAAATGGGCAAAGTGGAAGAATGGAGTTCTTCTGGACAATTTTAAAG -CCGAATGACGCTATCAACTTCGAGAGTAATGGAAATTTCATTGCTCCAGA -ATATGCATACAAAATTGTCAAGAAAGGGGACTCAGCAATTATGAAAAGTG -AATTGGAATATGGTAACTGCAACACCAAGTGTCAAACTCCAATGGGGGCG -ATAAACTCTAGTATGCCATTCCACAACATACACCCTCTCACCATCGGGGA -ATGCCCCAAATATGTGAAATCAAACAGATTAGTCCTTGCGACAGGGCTCA -GAAATAGCCCTCAAAGAGAGAGAAGAAGAAAAAAGAGAGGACTATTTGGA -GCTATAGCAGGTTTTATAGAGGGAGGATGGCAGGGAATGGTAGATGGTTG -GTATGGGTACCACCATAGCAATGAGCAGGGGAGTGGATACGCTGCAGACA -AAGAATCCACTCAAAAGGCAATAGATGGAGTCACCAATAAGGTCAACTCG -ATCATTGACAAAATGAACACTCAGTTTGAGGCCGTTGGAAGGGAATTTAA -TAACTTAGAAAGGAGAATAGAAAATTTAAACAAGAAGATGGAGGACGGAT -TCCTAGATGTCTGGACTTATAATGCTGAACTTCTGGTTCTCATGGAAAAT -GAGAGAACTCTAGACTTTCATGACTCAAATGTCAAGAACCTTTACGAAAA -GGTCCGACTACAACTTAGGGATAATGCAAAGGAGCTGGGTAACGGTTGTT -TCGAGTTCTATCACAAATGTGATAATGAATGTATGGAAAGTGTAAAAAAC -GGAACGTATGACTACCCGCAGTATTCAGAAGAAGCAAGACTAAACAGAGA -GGAAATAAGTGGAGTAAAATTGGAATCAATAGGAACTTACCAAATACTGT -CAATTTATTCAACAGTGGTGAGTTCCCTAGCACTGGCAATCATGGTAGCT -GGTCTATCTTTATGGATGTGCTCCAATGGATCGTTACAATGCAGAATT ->CHICKEN_HEBEI_326_2005 -ATGGAGAGAATAGTGCTTCTTCTTGCAATAATCGGTCTTGTTAAAAGTGA -TCAGATTTGCATTGGTTACCATGCAAACAACTCGACAGAGCAGGTTGACA -CAATAATGGAAAAGAACGTTACTGTTACACATGCTCAAGACATACTGGAG -AAGACACACAACGGGAAGCTCTGCAACCCAGATGGAGTGAAGCCTCTAAT -TTTGAAAGATTGTAGTGTAGCTGGATGGCTCCTCGGAAACCCAATGTGTG -ACGAATTTATCAATGTGCCGGAATGGTCTTACATAGTGGAGAAGGCCAGT -CCAGCCAATGGCCTCTGTTACCCAGGGGATTTCAATGACTATGAAGAACT -GAAACACCTATTGAGCAGAATAAACCATTTTGAGAAAATTCAGATCATCC -CCAAAAGTTCTTGGTCCGATCATGGAGCCTCATCAGGGGTGAGCTCAGCA -TGTTCCTATCTGGGGAAGCCCTCCTTTTTCAGAAATGTGGTATGGCTTAT -CAAAAAGAATAATACATACCCACCAATAAAGGTGAGCTACAACAATACCA -ACCAAGAAGATCTTTTGGTACTGTGGGGGATTCACCATCCCAATGATGAG -GCAGAGCAGATAAAGATCTATCAAAACCCAACCACCTATATTTCCGTTGG -AACATCAACACTAAACCAGAGATTGGTACCAAAAATAGCTACTAGATCCA -AAGTAAACGGGCAAAGTGGAAGAATGGAGTTCTTCTGGACAATTTTAAAG -CCGAATGATGCTATCAATTTCGATAGTAATGGAAATTTCATTGCTCCAGA -ATATGCATACAAAATTGTCAAGAAAGGGGACTCAGCGATTATGAAAAGTG -AATTGGAATATGGCAACTGCAACACCAAGTGTCAAACTCCAATGGGGGCG -ATAAATTCTAGTATGCCATTCCACAACATACACCCTCTCACCGTCGGGGA -ATGCCCCAAATATGTGAAATCAAACAGATTAGTCCTCGCGACTGGACTCA -GAAATGCCCCTCAAAGAGAGGGAGGAAGAAAAAAGAGAGGACTATTTGGA -GCCATAGCAGGGTTTATAGAGGGAGGATGGCAGGGAATGGTAGATGGTTG -GTATGGGTACCACCATAGCAATGAGCAGGGGAGTGGATACGCTGCAGACA -AAGAATCCACTCAAAAGGCAATAGATGGAGTCACCAATAAGGTCAACTCG -ATCATTGACAAAATGAACACTCAGTTTGAGGCCGTTGGAAGGGAATTTAA -TAACTTAGAAAGGAGAATAGAAAATTTAAACAAGAAGATGGAGGACGGAT -TCCTAGATGTCTGGACTTATAACGCTGAACTTCTGGTTCTCATGGAAAAT -GAGAGAACTCTAGACTTTCATGACTCAAATGTCAAGAACCTTTACGAAAA -GGTCCGACTACAGCTTAGGGATAATGCAAAGGAGCTGGGTAACGGTTGTT -TCGAGTTCTATCACAAATGTGATAATGAATGTATGGAAAGTGTAAAAAAC -GGAACGTATGACTACCCGCAGTATTCAGAAGAAGCAAGACTAAACAGAGA -GGAAATAAGTGGAGTAAAATTGGAATCAATGGGAACTTACCAAATACTGT -CAATTTATTCAACAGTGGCGAGTTCCCTAGCATTGGCAATCATGGTAGCT -GGTCTATCTTTATGGATGTGCTCCAATGGATCGTTACAATGCAGAATT ->CHICKEN_HONGKONG_915_97 -ATGGAGAAAATAGTGCTTCTTCTTGCAACAGTCAGTCTTGTTAAAAGTGA -TCAGATTTGCATTGGTTACCATGCAAACAACTCGACAGAGCAGGTTGACA -CAATAATGGAAAAGAATGTTACTGTTACACATGCCCAAGACATACTGGAA -AGGACACACAACGGGAAGCTCTGCGATCTAAATGGAGTGAAACCTCTCAT -TTTGAGGGATTGTAGTGTAGCTGGATGGCTCCTCGGAAACCCTATGTGTG -ACGAATTCATCAATGTGCCGGAATGGTCTTACATAGTGGAGAAGGCCAGT -CCAGCCAATGACCTCTGTTATCCAGGGAATTTCAACGACTATGAAGAACT -GAAACACCTATTGAGCAGAATAAACCATTTTGAGAAAATTCAGATCATCC -CCAAAAGTTCTTGGTCCAATCATGATGCCTCATCAGGGGTGAGCTCAGCA -TGTCCATACCTTGGGAGGTCCTCCTTTTTCAGAAATGTGGTATGGCTTAT -CAAAAAGAACAGTGCATACCCAACAATAAAGAGGAGCTACAATAATACCA -ACCAAGAAGATCTTTTGGTACTGTGGGGGATTCACCATCCTAATGATGCG -GCAGAGCAGACAAAGCTCTATCAAAATCCAACCACCTACATTTCCGTTGG -AACATCAACACTGAACCAGAGATTGGTTCCAGAAATAGCTACTAGACCCA -AAGTAAACGGGCAAAGTGGAAGAATGGAGTTCTTCTGGACAATTTTAAAG -CCGAATGATGCCATCAATTTCGAGAGTAATGGAAATTTCATTGCCCCAGA -ATATGCATACAAAATTGTCAAGAAAGGGGACTCAACAATTATGAAAAGTG -AATTGGAATATGGTAACTGCAACACCAAGTGTCAAACTCCAATGGGGGCG -ATAAACTCTAGTATGCCATTCCACAACATACACCCCCTCACCATCGGGGA -ATGCCCCAAATATGTGAAATCAAACAGATTAGTTCTTGCGACTGGACTCA -GAAATACCCCTCAAAGGGAGAGAAGAAGAAAAAAGAGAGGACTATTTGGA -GCTATAGCAGGTTTTATAGAGGGAGGATGGCAGGGCATGGTAGATGGTTG -GTATGGGTACCACCATAGCAATGAGCAGGGGAGTGGATACGCTGCAGACA -AAGAATCCACTCAAAAGGCAATAGATGGAGTCACCAATAAGGTCAACTCG -ATCATTAACAAAATGAACACTCAGTTTGAGGCCGTTGGAAGGGAATTTAA -TAACTTAGAAAGGAGAATAGAGAATTTAAACAAGAAAATGGAAGACGGAT -TCCTAGATGTCTGGACTTACAATGCTGAACTTCTGGTTCTCATGGAAAAT -GAGAGAACTCTCGACTTTCATGACTCAAATGTCAAGAACCTTTACGACAA -GGTCCGACTACAGCTTAGGGATAATGCAAAGGAACTGGGTAATGGTTGTT -TCGAATTCTATCACAAATGTGATAATGAATGTATGGAAAGTGTAAAAAAC -GGAACGTATGACTACCCGCAGTATTCAGAAGAAGCAAGACTAAACAGAGA -GGAAATAAGTGGAGTAAAATTGGAATCAATGGGAACTTACCAAATACTGT -CAATTTATTCAACAGTGGCGAGTTCCCTAGCACTGGCAATCATGGTAGCT -GGTCTATCTTTATGGATGTGCTCCAATGGATCGTTACAATGCAGAATT ->VIETNAM_3062_2004 -ATGGAGAAAATAGTGCTTCTTTTTGCAATAGTCAGTCTTGTTAAAAGTGA -TCAGATTTGCATTGGTTACCATGCAAACAACTCGACAGAGCAGGTTGACA -CAATAATGGAAAAGAACGTTACTGTTACACATGCCCAAGACATACTGGAA -AAGACACACAACGGGAAGCTCTGCGATCTAGATGGAGTGAAGCCTCTAAT -TTTGAGAGATTGTAGTGTAGCTGGATGGCTCCTCGGAAACCCAATGTGTG -ACGAATTCATCAATGTGCCGGAATGGTCTTACATAGTGGAGAAGGCCAAT -CCAGTCAATGACCTCTGTTACCCAGGGGATTTCAATGACTATGAAGAATT -GAAACACCTATTGAGCAGAATAAACCATTTTGAGAAAATTCAGATCATCC -CCAAAAGTTCTTGGTCCAGTCATGAAGCCTCATTAGGAGTGAGCTCAGCA -TGTCCATACCAGGGAAAGTCCTCCTTTTTCAGAAATGTGGTATGGCTTAT -CAAAAAGAACAGTACATACCCAACAATAAAGAGGAGCTACAATAATACCA -ACCAAGAAGATCTTTTGGTACTGTGGGGGATTCACCATCCTAATGATGCG -GCAGAGCAGACAAAGCTCTATCAAAACCCAACCACCTATATTTCCGTTGG -GACATCAACACTAAACCAGAGGTTGGTACCAAGAATAGCTACTAGATCCA -AAGTAAACGGGCAAAGTGGAAGGATGGAGTTCTTCTGGACAATTTTAAAA -CCGAATGATGCAATCAACTTCGAGAGTAATGGAAATTTCATTGCTCCAGA -ATATGCATACAAAATTGTCAAGAAAGGGGACTCAACAATTATGAAAAGTG -AATTGGAATATGGTAACTGCAACACCAAGTGTCAAACTCCAATGGGGGCG -ATAAACTCTAGTATGCCATTCCACAATATACACCCTCTCACCATCGGGGA -ATGCCCCAAATATGTGAAATCAAACAGATTAGTCCTTGCGACTGGGCTCA -GAAATAGCCCTCAAAGAGAGAGAAGAAGAAAAAAGAGAGGATTATTTGGA -GCTATAGCAGGTTTTATAGAGGGAGGATGGCAGGGAATGGTAGATGGTTG -GTATGGGTACCACCATAGCAATGAGCAGGGGAGTGGGTACGCTGCAGACA -AAGAATCCACTCAAAAGGCAATAGATGGAGTCACCAATAAGGTCAACTCG -ATCATTGACAAAATGAACACTCAATTTGAGGCCGTTGGAAGGGAATTTAA -CAACTTAGAAAGGAGAATAGAGAATTTAAACAAGAAGATGGAAGACGGGT -TCCTAGATGTCTGGACTTATAATGCTGAACTTCTGGTTCTCATGGAAAAT -GAGAGAACTCTAGACTTTCATGACTCAAATGTCAAGAACCTTTACGACAA -GGTCCGACTACAGCTTAGGGATAATGCAAAGGAGCTGGGTAACGGTTGTT -TCGAGTTCTATCATAAATGTGATAATGAATGTATGGAAAGTGTAAGAAAC -GGAACGTATGACTACCCGCAGTATTCAGAAGAAGCAAGACTAAAAAGAGA -GGAAATAAGTGGAGTAAAATTGGAATCAATAGGAATTTACCAAATACTGT -CAATTTATTCTACAGTGGCGAGTTCCCTAGCACTGGCAATCATGGTAGCT -GGTCTATCCTTATGGATGTGCTCCAATGGGTCG--------------- ->GOOSE_HONGKONG_W355_97 -ATGGAGAAAATAGTGCTTCTTCTTGCAACAGTCAGTCTTGTTAAAAGTGA -TCAGATTTGCATTGGTTACCATGCAAACAACTCGACAGAGCAGGTTGACA -CAATAATGGAAAAGAATGTTACTGTTACACATGCCCAAGACATACTGGAA -AGGACACACAACGGGAAGCTCTGCGATCTAAATGGAGTGAAACCTCTCAT -TTTGAGGGATTGTAGTGTAGCTGGATGGCTCCTCGGAAACCCTATGTGTG -ACGAATTCATCAATGTGCCGGAATGGTCTTACATAGTGGAGAAGGCCAGT -CCAGCCAATGACCTCTGTTATCCAGGGAATTTCAACGACTATGAAGAACT -GAAACACCTATTGAGCAGAATAAACCATTTTGAGAAAATTCAGATCATCC -CCAAAAGTTCTTGGTCCAATCATGATGCCTCATCAGGGGTTAGCTCAGCA -TGTCCATACCTTGGGAGGTCCTCCTTTTTCAGAAATGTGGTATGGCTTAT -CAAAAAGAACAGTGCATACCCAACAATAAAGAGGAGCTACAATAATACCA -ACCAAGAAGATCTTTTGGTACTGTGGGGGATTCACCATCCTAATGATGCG -GCAGAGCAGACAAAGCTTTATCAAAATCCAACCACCTACATTTCCGTTGG -AACATCAACACTGAACCAGAGATTGGTTCCAGAAATAGCTACTAGACCCA -AAGTAAACGGGCAAAGTGGAAGAATGGAGTTCTTCTGGACAATTTTAAAG -CCGAATGATGCCATCAATTTCGAGAGTAATGGAAATTTCATTGCCCCAGA -ATATGCATACAAAATTGTCAAGAAAGGGGACTCAACAATTATGAAAAGTG -AATTGGAATATGGTAACTGCAACACCAAGTGTCAAACTCCAATGGGGGCG -ATAAACTCTAGTATGCCATTCCACAACATACACCCCCTCACCATCGGGGA -ATGCCCCAAATATGTGAAATCAAACAGATTAGTTCTTGCGACTGGACTCA -GAAATACCCCTCAAAGGGAGAGAAGAAGAAAAAAGAGAGGACTATTTGGA -GCTATAGCAGGTTTTATAGAGGGAGGATGGCAGGGCATGGTAGATGGTTG -GTATGGGTACCACCATAGCAATGAGCAGGGGAGTGGATACGCTGCAGACA -AAGAATCCACTCAAAAGGCAATAGATGGAGTCACCAATAAGGTCAACTCG -ATCATTAACAAAATGAACACTCAGTTTGAGGCCGTTGGAAGGGAATTTAA -TAACTTAGAAAGGAGAATAGAGAATTTAAACAAGAAAATGGAAGACGGAT -TCCTAGATGTCTGGACTTACAATGCTGAACTTCTGGTTCTCATGGAAAAT -GAGAGAACTCTCGACTTTCATGACTCAAATGTCAAGAACCTTTACGACAA -GGTCCGACTACAGCTTAGGGATAATGCAAAGGAACTGGGTAATGGTTGTT -TCGAATTCTATCACAAATGTGATAATGAATGTATGGAAAGTGTAAGAAAC -GGAACGTATGACTACCCGCAGTATTCAGAAGAAGCAAGACTAAACAGAGA -GGAAATAAGTGGAGTAAAATTGGAATCAATGGGAACTTACCAAATACTGT -CAATTTATTCAACAGTGGCGAGTTCCCTAGCACTGGCAATCATGGTAGCT -GGTCTATCTTTATGGATGTGCTCCAATGGATCGTTACAATGCAGAATT ->DUCK_HONGKONG_Y283_97 -ATGGAGAAAATAGTGCTTCTTCTTGCAACAGTCAGTCTTGTTAAAAGTGA -TCAGATTTGCATTGGTTACCATGCAAACAACTCGACAGAGCAGGTTGACA -CAATAATGGAAAAGAATGTTACTGTTACACATGCCCAAGACATACTGGAA -AGGACACACAACGGGAAGCTCTGCGATCTAAATGGAGTGAAACCTCTCAT -TTTGAGGGATTGTAGTGTAGCTGGATGGCTCCTCGGAAACCCTATGTGTG -ACGAATTCATCAATGTGCCGGAATGGTCTTACATAGTGGAGAAGGCCAGT -CCAGCCAATGACCTCTGTTATCCAGGGAATTTCAACGACTATGAAGAACT -GAAACACCTATTGAGCAGAATAAACCATTTTGAGAAAATTCAGATCATCC -CCAAAAGTTCTTGGTCCAATCATGATGCCTCATCAGGGGTTAGCTCAGCA -TGTCCATACCTTGGGAGGTCCTCCTTTTTCAGAAATGTGGTATGGCTTAT -CAAAAAGAACAGTGCATACCCAACAATAAAGAGGAGCTACAATAATACCA -ACCAAGAAGATCTTTTGGTACTGTGGGGGATTCACCATCCTAATGATGCG -GCAGAGCAGACAAAGCTTTATCAAAATCCAACCACCTACATTTCCGTTGG -AACATCAACACTGAACCAGAGATTGGTTCCAGAAATAGCTACTAGACCCA -AAGTAAACGGGCAAAGTGGAAGAATGGAGTTCTTCTGGACAATTTTAAAG -CCGAATGATGCCATCAATTTCGAGAGTAATGGAAATTTCATTGCCCCAGA -ATATGCATACAAAATTGTCAAGAAAGGGGACTCAACAATTATGAAAAGTG -AATTGGAATATGGTAACTGCAACACCAAGTGTCAAACTCCAATGGGGGCG -ATAAACTCTAGTATGCCATTCCACAACATACACCCCCTCACCATCGGGGA -ATGCCCCAAATATGTGAAATCAAACAGATTAGTTCTTGCGACTGGACTCA -GAAATACCCCTCAAAGGGAGAGAAGAAGAAAAAAGAGAGGACTATTTGGA -GCTATAGCAGGTTTTATAGAGGGAGGATGGCAG----------------- --------------------------------------------------- --------------------------------------------------- --------------------------------------------------- --------------------------------------------------- --------------------------------------------------- --------------------------------------------------- --------------------------------------------------- --------------------------------------------------- --------------------------------------------------- --------------------------------------------------- --------------------------------------------------- ------------------------------------------------- ->DUCK_VIETNAM_376_2005 -ATGGAGAAAATAGTGCTTCTTTTTGCGATAGTCAGTCTTGTTAAAAGTGA -TCAGATTTGCATTGGTTACCATGCAAACAACTCAACAGAGCAGGTTGACA -CAATAATGGAAAAGAACGTTACTGTTACACATGCCCAAGACATACTGGAA -AAGACACACAACGGGAAGCTCTGCGATCTAGATGGAGTGAAGCCTCTAAT -TTTGAGAGATTGTAGTGTAGCTGGATGGCTCCTCGGAAACCCAATGTGTG -ACGAATTCATCAATGTGCCGGAATGGTCTTACATAGTGGAGAAGGCCAAT -CCAGTCAATGACCTCTGTTACCCAGGGGATTTCAATGACTATGAAGAATT -GAAACACCTATTGAGCAGAATAAACCATTTTGAGAAAATTCAGATCATCC -CCAAAAGTTCTTGGTCCAGTCATGAAGCCTCATTAGGAGTGAGCTCAGCA -TGTCCATACCAGGGAAATCCCTCCTTTTTCAGAAATGTGGTATGGCTTAT -CAAAAAGAACAGTACATACCCAACAATAAAGAGGAACTACAATAATACCA -ACCAAGAAGATCTTTTGGTAATGTGGGGGATTCACCATCCTAATGATGCG -GCAGAGCAGACAAAGCTCTATCAAAACCCAACCACCTATATTTCCGTTGG -GACATCAACACTAAACCAGAGATTGGTACCAAGAATAGCTACTAGATCCA -AAATAAACGGGCAAAGTGGGAGGATAGAGTTCTTCTGGACAATTTTAAAA -CCGAATGATGCAATCAACTTCGAGAGTAATGGAAATTTCATTGCTCCAGA -ATATGCATACAAAATTGTCAAGAAAGGGGACTCAACAATTATGAAAAGTG -AATTGGAATATGGTAACTGCAACACCAAGTGTCAAACTCCAATGGGGGCG -ATAAACTCTAGTATGCCATTCCACAATATACATCCTCTCACCATCGGGGA -GTGCCCCAAATATGTGAAATCAAACAGATTAGTCCTTGCGACTGGGCTCA -GAAATAGCCCTCAAAGAGAGAGAAGAAGAAAAAAGAGAGGATTATTTGGA -GCTATAGCAGGTTTTATAGAAGGAGGATGGCAAGGAATGGTAGATGGTTG -GTATGGGTACCACCATAGCAATGAGCAGGGAAGTGGGTACGCTGCAGACA -AAGAATCCACTCAAAAGGCAATAGATGGAGTCACCAATAAGGTCAACTCG -ATCATTGACAAAATGAACACTCAGTTTGAGGCCGTTGGAAGGGAATTTAA -CAACTTAGAAAGGAGAATAGAGAATTTAAACAAGAAGATGGAAGACGGGT -TCCTAGATGTCTGGACTTATAATGCTGAACTTCTGGTTCTCATGGAAAAT -GAGAGAACTCTAGACTTTCATGACTCAAATGTCAAGAACCTTTACGACAA -GGTCCGACTACAGCTTAGAGATAATGCAAAGGAGCTGGGTAACGGTTGTT -TCGAGTTCTATCATAAATGTGATAATGAATGTATGGAAAGTGTAAGAAAC -GGAACGTATGACTACCCGCAGTATTCAGAAGAAGCAAGATTAAAAAGAGA -GGAAATAAGTGGAGTAAAATTGGAATCAATAGGAATTTACCAAATACTGT -CAATTTATTCTACTGTGGCGAGTTCCCTAGCACTGGCAATCATGGTAGCT -GGTCTATCCTTATGGATGTGCTCCAATGGGTCGTTACAATGCAGA--- ->MALLARD_VIETNAM_16_2003 -ATGGAGAAAATAGTGCTTCTTTTTGCAATAGTCAGTCTTGTTAAAAGTGA -TCAGATTTGCATTGGTTACCATGCAAACAACTCGACAGAGCAGGTTGACA -CAATAATGGAAAAGAACGTTACTGTTACACATGCCCAAGACATACTGGAA -AAGACACACAACGGGAAGCTCTGCGATCTAGATGGAGTGAAGCCTCTAAT -TTTGAGAGATTGTAGTGTAGCTGGATGGCTCCTCGGAAACCCAATGTGTG -ACGAATTCATCAATGTGCCGGAATGGTCTTACATAGTGGAGAAGGCCAAT -CCAGTCAATGACCTCTGTTACCCAGGGGATTTCAATGAATATGAAGAATT -GAAACACCTATTGAGCAGAATAAACCATTTTGAGAAAATTCAGATCATCC -CCAAAAGTTCTTGGTCCAGTCATGAAGCCTCATTAGGGGTGAGCTCAGCA -TGTCCATACCAGGGAAAGTCCTCCTTTTTCAGAAATGTGGTATGGCTTGT -CAAAAAGAACAGTACATACCCAACAATAAAGAGGAGCTACAATAATACCA -ACCAAGAAGATCTTTTGGTACTGTGGGGGATTCACCATCCTAATGATGCG -GCAGAGCAGACAAAGCTCTATCAAAATCCAACCACCTACATTTCCGTTGG -GACATCAACACTAAACCAGAGATTGGTACCAAGAATAGCTACTAGATCCA -AAGTAAACGGGCAAAGTGGAAGGATGGAGTTCTTCTGGACAATTTTAAAA -CCGAATGATGCAATCAACTTCGAGAGTAATGGAAATTTCATTGCTCCAGA -ATATGCATACAAAATTGTCAAGAAAGGGGACTCAACAATTATGAAAAGTG -AATTGGAATATGGTAACTGCAACACCAAGTGTCAAACTCCAATGGGGGCG -ATAAACTCTAGTATGCCATTCCACAATATACACCCCCTCACCATCGGGGA -ATGCCCCAAATATGTGAAATCAAACAGATTAGTCCTTGCGACTGGGCTCA -GAAATAGCCCTCAAAGAGAGAGAAGAAGAAAAAAGAGAGGATTATTTGGA -GCTATAGCAGGTTTTATAGAGGGAGGATGGCAAGGAATGGTAGATGGTTG -GTATGGGTACCACCATAGCAATGAGCAGGGGAGTGGGTACGCTGCAGACA -AAGAATCCACTCAAAAGGCAATAGATGGAGTCACCAATAAGGTCAACTCG -ATCATTGACAAAATGAACACTCAGTTTGAGGCCGTTGGAAGGGAATTTAA -CAACTTAGAAAGGAGAATAGAGAATTTAAACAAGAAGATGGAAGACGGGT -TCCTAGATGTCTGGACTTATAATGCTGAACTTCTGGTTCTCATGGAAAAT -GAGAGAACTCTAGACTTTCATGACTCAAATGTCAAGAACCTTTACGACAA -GGTCCGACTACAGCTTAGGGATAATGCAAAGGAGCTGGGTAACGGTTGTT -TCGAGTTCTATCATAAATGTGATAATGAATGTATGGAAAGTGTAAGAAAC -GGAACGTATGACTACCCGCAGTATTCAGAAGAAGCAAGACTAAAAAGAGA -GGAAATAAGTGGAGTAAAATTGGAATCAATAGGAATTTACCAAATACTGT -CAATTTATTCTACAGTGGCGAGTTCCCTAGCACTGGCAATCATGGTAGCT -GGTCTATCCTTATGGATGTGCTCCAATGGGTCGTTACAATGCAGA--- ->CHICKEN_THAILAND_KANCHANABURI_CK_160_2005 -ATGGAGAAAATAGTGCTTCTTTTTGCAATAGTCAGTCTTGTTAAAAGTGA -TCAGATTTGCATTGGTTACCATGCAAACAACTCAACAGAGCAGGTTGACA -CAATAATGGAAAAGAACGTTACTGTTACACATGCCCAAGACATACTGGAA -AAGACACACAACGGGAAGCTCTGTGATCTAGATGGAGTGAAGCCTCTAAT -TTTGAGAGATTGTAGTGTAGCTGGATGGCTCCTTGGAAACCCAATGTGTG -ATGAATTCATCAATGTGCCGGAATGGTCTTACATAGTGGAGAAGGCCAAT -CCAGCCAATGACCTCTGTTACCCAGGGGATTTCAATGACTATGAAGAATT -GAAACACCTATTGAGCAGAATAAACCATTTTGAGAAAATTCAGATCATCC -CCAAAAGTTCTTGGTCCAGTCATGAAGCCTCATTAGGAGTGAGCTCAGCA -TGTCCATATCAGGGAAAGTCCTCCTTTTTCAGAAATGTGGTATGGCTTAT -CAAAAAGAACAGTACATACCCAACAATAAAGAGGAGCTACAATAATACCA -ACCAAGAAGATCTTTTGGTACTGTGGGGGATTCACCATCCTAATGATGCG -GCAGAGCAGACAAAGCTCTATCAAAACCCAACCACCTACATTTCCGTTGG -GACATCAACACTAAACCAGAGATTGGTACCAAGAATAGCTACTAGATCCA -AAGTAAACGGGCAAAGTGGAAGGATGGAGTTCTTCTGGACAATTTTAAAA -CCGAATGATGCAATCAACTTCGAGAGTAATGGAAATTTCATTGCTCCAGA -ATATGCATACAAAATTGTCAAGAAAGGGGACTCAACAATTATGAAAAGTG -AATTGGAATATGGTAACTGCAACACCAAGTGTCAAACTCCAATGGGGGCG -ATAAACTCTAGTATGCCATTCCACAATATACACCCTCTCACCATCGGGGA -ATGCCCCAAATATGTGAAATCAAACAGATTAGTCCTTGCGACTGGACTCA -GAAATAGCCCTCAAAGAGAGAAAAGAAGAAAAAAGAGAGGATTATTTGGA -GCTATAGCAGGTTTTATAGAGGGAGGATGGCAGGGAATGGTAGATGGTTG -GTATGGGTACCACCATAGCAATGAGCAGGGGAGTGGGTACGCTGCAGACA -AAGAATCCACTCAAAAGGCAATAGATGGAGTCACCAATAAGGTCAACTCG -ATCATTGACAAAATGAACACTCAGTTTGAGGCCGTTGGAAGGGAATTTAA -CAACTTAGAAAGGAGAATAGAGAATTTAAACAAGAAGATGGAAGACGGGT -TCCTAGATGTCTGGACTTATAATGCTGAACTTCTGGTTCTCATGGAAAAT -GAGAGAACTCTAGACTTTCATGACTCAAATGTCAAGAACCTTTACGACAA -GGTCCGACTACAGCTTAGGGATAATGCAAAGGAGCTGGGTAACGGTTGTT -TCGAGTTCTATCATAAATGTGATAATGAATGTATGGAAAGTGTAAGGAAC -GGAACGTATGACTACCCGCAGTATTCAGAAGAAGCAAGACTAAAAAGAGA -GGAAATAAGTGGAGTAAAATTGGAATCAATAGGAATTTACCAAATACTGT -CAATTTATTCTACAGTAGCGAGTTCCCTAGCACTGGCAATCATGGTAGCT -GGTCTATCCTTATGGATGTGCTTCAATGGGTCGTTACAATGCAGAATT ->DUCK_GUANGZHOU_20_2005 -ATGGAGAAAATAGTGCTTCTTCTTGCAATAGTCAGTCTTGTTAAAAGTGA -TCAGATTTGCATTGGTTACCATGCAAACAACTCGACAGAGCAGGTTGACA -CAATAATGGAAAAGAACGTTACTGTTACACATGCCCAAGACATACTGGAA -AAGACACACAATGGGAAGCTCTGCGACCTAGATGGGGTGAAGCCTCTAAT -TTTGAGAGATTGTAGTGTAGCTGGATGGCTCCTCGGGAACCCAATGTGTG -ACGAATTCATCAATGTACCGGAATGGTCTTACATAGTGGAGAAGGCCAAT -CCAGCCAATGACCTCTGTTACCCAGGTGATTTCAACGATTATGAAGAACT -GAAACACCTATTGAGCAGAATAAACCATTTTGAGAAAATTCAGATCATCC -CCAAAAGTTCTTGGTCCAACCATGAATCCTCATCAGGGGTGAGCTCAGCA -TGTCCATACCTGGGAAAGCCCTCCTTTTTCAGAAATGTGGTATGGCTTAT -CAAAAAGAACAATGCATACCCAACAATAAAGAAGAGCTACAATAATACCA -ACCAAGAAGATCTTTTGGTACTGTGGGGGATTCACCATCCTAATGATGCG -ACAGAGCAGACAAAGCTCTATCAAAACCCAACCACTTATATTTCCGTTGG -AACATCAACACTAAACCAGAGATTGGTACCAAAAATAGCTACCAGATCCA -AAGTAAACGGGCAAAGTGGAAGGATGGAGTTCTTCTGGACAATTTTAAAA -CCGAATGATGCAATCAACTTCGAGAGTAATGGAAATTTCATTGCTCCAGA -ATATGCATACAAAATTGTCAAGAAAGGGGACTCAGCAATTATGAAAAGTG -AATTGGAATATGGTAACTGCAACACCAAATGTCAAACTCCAATGGGGGCG -ATAAACTCTAGTATGCCATTCCACAACATACACCCTCTCACCATCGGGGA -ATGCCCCAAATATGTGAAATCAAACAGATTAGTCCTTGCGACTGGGCTCA -GAAATAGCCCTCAAAGGGAGAGAAGAAGAAAGAAGAGAGGACTATTTGGA -GCTATAGCAGGTTTTATAGAGGGAGGATGGCAGGGAATGGTAGATGGTTG -GTATGGATACCACCATAGCAATGAGCAGGGGAGTGGATACGCTGCAGACA -AAGAATCCACTCAAAAGGCAATAGATGGAGTCACCAATAAGGTCAACTCG -ATCATTGACAAAATGAACACTCAGTTTGAGGCCGTTGGAAGGGAATTTAA -TAACTTAGAAAGGAGAATAGAGAATTTAAACAAGAAGATGGAAGACGGAT -TCCTAGATGTCTGGACTTATAATGCTGAACTTCTGGTTCTCATGGAAAAT -GAGAGAACTCTAGACTTTCATGACTCAAATGTCAGGAACCTTTACGACAA -GGTCCGACTACAGCTTAGGGATAATGCAAAAGAGCTGGGTAACGGTTGTT -TCGAGTTCTATCACAAATGTGATGATGAATGCATGGAAAGTGTAAGAAAC -GGAACGTATGACTACCCGCAGTATTCAGAAGAAGCAAGGCTAAAAAGAGA -GGAAATAAGTGGAGTAAAATTGGAATCAATAGGAACTTACCAAATACTGT -CAATTTATTCAACAGTGGCAAGTTCCCTAGCGCTGGCAATCATGGTAGCT -GGTCTATCTTTATGGATGTGCTCCAATGGTTCGTTACAATGCAGAATT ->CK_HK_WF157_2003 -ATGGAGAAAATAGTGCTTCTTCTTGCAATAGTCAGTCTTGTTAAAAGTGA -TCAGATTTGCATTGGTTACCATGCAAACAACTCGACAGAGCAGGTTGACA -CAATAATGGAAAAGAACGTTACTGTTACACATGCCCAAGACATACTGGAA -AAGACCCACAACGGGAAGCTCTGCGACCTAGATGGAGTGAAGCCTCTAAT -TTTGAGAGATTGTAGTGTAGCTGGATGGCTCCTCGGGAACCCAATGTGTG -ACGAATTCATCAATGTACCGGAATGGTCTTACATAGTGGAGAAGGCCAGT -CCATCCAATGACCTCTGTTACCCAGGGGATTTCAACAATTATGAAGAACT -GAAACACCTATTGAGCAGAATAAACCATTTTGAGAAAATTCAGATCATCC -CCAAAAGCTCTTGGTCCAATCATGAAGCCTCATCAGGGGTGAGCTCAGCA -TGTCCATACCTGGGAAAGCCCTCCTTTTTCAGAAATGTGGTATGGCTTAT -CAAAAAGAACAGTACATACCCAACAATAAAGAGGAGCTACAATAATACCA -ACCAAGAAGATCTTTTGGTACTGTGGGGGATTCACCATCCTAATGATGCG -GCAGAGCAGATAAAGCTCTATCAAAACCCAACCACCTATATTTCCGTTGG -AACATCAACACTAAACCAGAGATTGGTACCAAAAATAGCTACTAGATCCA -AAGTAAACGGGCAAAGTGGAAGGATGGAGTTCTTCTGGACAATTTTAAAA -CCGAATGATGCAATCAACTTCGAGAGTAATGGAAATTTCATTGCTCCAGA -ATATGCATACAAAATTGTCAAGAAAGGGGACTCAGCAATTATGAAAAGTG -AATTGGAATATGGTAACTGCAACACCAAGTGTCAAACTCCAATGGGGGCG -ATAAACTCTAGTATGCCCTTCCACAACATACACCCTCTCACCATCGGGGA -ATGCCCCAAATATGTGAAATCAAACAGACTAGTCCTTGCGACTGGGCTCA -GAAATAGCCCTCAAAGAGAGAGAAGAAGAAAAAAGAGAGGACTATTTGGA -GCTATAGCGGGTTTTATAGAGGGAGGATGGCAGGGAATGGTAGATGGTTG -GTATGGATACCACCATAGCAATGAGCAGGGGAGTGGATACGCTGCAGACA -AAGAATCCACTCAAAAGGCAATAGATGGAGTCACCAATAAGGTCAACTCG -ATCATTGACAAAATGAACACTCAGTTTGAGGCCGTTGGAAGGGAATTTAA -TAACTTAGAAAGGAGAATAGAGAATTTAAACAAGAAGATGGAAGACGGAT -TCCTAGATGTCTGGACTTATAATGCTGAACTTCTAGTTCTCATGGAAAAT -GAGAGAACTCTAGACTTTCATGACTCAAATGTCAAGAACCTTTACGACAA -GGTCCGACTACAGCTTAGGGATAATGCAAAAGAGCTGGGTAACGGTTGTT -TCGAGTTCTATCACAAATGTGATAATGAATGTATGGAAAGTGTAAGAAAC -GGAACGTATGACTACTCGCAGTATTCAGAAGAAGCAAGACTAAAAAGAGA -GGAAATAAGTGGAGTAAAATTGGAATCAATAGGAACTTACCAAATACTGT -CAATTTATTCAACAGTGGCGAGTTCCCTAGCACTGGCAATCATGGTAGCT -GGTCTATCTTTATGGATGTGCTCCAATGGTTCGTTACAATGT------ ->SWINE_ANHUI_2004 -ATGGAGAAAATAGTGCTTCTTCTTGCAATAGTCAGTCTTGTTAAAGGTGA -TCAGATTTGCACTGGTTACCATGCAAACAACTCGACAGAGCAGGTTGACA -CAATAATGGAAAAGAACGTTACTGTTACACATGCTCAAGACATACTGGAA -AAGACACACAACGGGAAGCTCTGCGACCTAGATGGAGTGAAGCCTCTAAT -TTTAAGAGATTGTAGTGTAGCTGGATGGCTCCTCGGGAACCCAATGTGTG -ACGAATTCATCAATGTGCCGGAATGGTCTTACATAGTGGAGAAGGCCAAT -CCAGCCAATGACCTCTGTTACCCAGGGGATTTCAACGACTATGAAGAACT -GAAACACCTATTGAGCAGAATAAACCATTTTGAGAAAATTCAGATCATCC -CCAAAAGTTCTTGGTCCGATCATGAAGCCTCATCAGGGGTGAGCTCAGCA -TGTCCATACCAGGGAAGGTCCTCCTTTTTCAGAAATGTGGTATGGCTTAT -CAAAAAGAACAGTGCATACCCAACAATAAAGAGGAGCTACAATAATACCA -ACCAAGAAGATCTTTTGGTACTGTGGGGGATTCACCACCCTAATGATGCG -GCAGAGCAGATAAAGCTCTATCAAAACCCAACCACCTATATTTCCGTTGG -GACATCAACACTAAACCAGAGATTGGTACCAAAAATAGCTACTAGATCCA -AAGTAAACGGACAAAGTGGAAGAATGGAGTTCTTCTGGACAATTTTAAAA -CCGAATGATGCTATCAATTTCGAGAGTAATGGAAATTTCATTGCTCCAGA -ATATGCATACAAAATTGTCAAGAAAGGGGACTCTGCAATTATGAAAAGTG -AATTGGAATATGGCAACTGCAACACCAAGTGTCAAACTCCAGTGGGGGCG -ATAAATTCTAGCATGCCATTCCACAACATACACCCTCTCACCATCGGGGA -ATGCCCCAAATATGTGAAATCAAACAGATTAGTCCTTGCGACTGGACTCA -GAAATGCCCCTCAAAGAGAGGGAAGAAGAAAAAAGAGAGGACTATTTGGA -GCTATAGCAGGGTTTATAGAGGGAGGATGGCAGGGGATGGTAGATGGTTG -GTATGGGTACCACCATAGCAATGAGCAGGGGAGTGGATACGCTGCAGACA -AAGAATCCACTCAAAAAGCAATAGATGGAGTCACCAATAAGGTCAACTCG -ATCATTGACAAAATGAACACTCAGTTTGAGGCCGTTGGAAGGGAATTTAA -TAACTTAGAAAGGAGAATAGAAAATTTAAACAAGAAGATGGAGGACGGAT -TCCTAGATGTCTGGACTTATAATGCTGAACTTCTGGTTCTCATGGAAAAT -GAGAGAACTCTAGACTTTCATGACTCAAATGTCAAGAACCTTTACGACAA -GGTCCGACTACAGCTTAGGGATAATGCAAAGGAGCTGGGTAACGGTTGTT -TCGAGTTCTATCACAGATGTGATAATGAATGTATGGAAAGTGTAAGAAAC -GGAACGTATGACTACCCGCAGTATTCGGAAGAAGCAAGACTAAACAGAGA -GGAAATAAGTGGAGTAAAATTGGAATCAATAGGAACTTACCAAATACTGT -CAATTTATTCAACAGTGGCGAGTTCCCTAGCACTGGCAATCATGGTGGCT -GGTCTATCTTTATGGATGTGCTCCAATGGATCGTTACAATGCAGAATT ->DUCK_VIETNAM_272_2005 -ATGGAGAAAATAGTGCTTCTTTTTGCAATAGTCAGTCTTGTTAAAAGTGA -TCAGATTTGCATTGGTTACCATGCAAACAACTCGACAGAGCAGGTTGACA -CAATAATGGAAAAGAACGTTACTGTTACACATGCCCAAGACATACTGGAA -AAGACACACAACGGGAAGCTCTGCGATCTAGATGGAGTGAAGCCTCTAAT -TTTGAGAGATTGTAGTGTAGCTGGATGGCTCCTTGGAAATCCAATGTGTG -ACGAATTCATCAATGTGCCGGAATGGTCTTACATAGTGGAGAAGGCCAAT -CCAGTCAATGACCTCTGTTACCCAGGGGATTTCAATGACTATGAAGAATT -GAAACACCTATTGAGCAGAATAAACCATTTTGAGAAAATTCAGATCATCC -CCAAAAGTTCTTGGCCCAGTCATGAAGCCTCATTAGGGGTGAGCTCAGCA -TGTCCATACCAGGGAAGGTCCTCCTTTTTCAGAAATGTGGTATGGCTTAT -CAAAAAGAACAGTACATATCCAACAATAAAGAGGAGCTACAATAATACCA -ACCAAGAAGATCTTTTGGTACTGTGGGGGATTCACCATCCTAATGATGCG -GCAGAGCAGACAAAGCTCTATCAAAACCCAACCACCTATATTTCCGTTGG -GACATCAACACTAAACCAGAGATTGATACCAAGAATAGCTACTAGATCCA -AAGTAAACGGGCAAAGTGGAAGGATGGAGTTCTTCTGGACAATTTTAAAA -CCGAATGATGCAATCAATTTCGAGAGTAATGGAAATTTCATTGCCCCAGA -ATACGCATACAAAATTGTCAAGAAAGGGGACTCAACAATTATGAAAAGTG -AATTGGAATATGGTAACTGCAACACCAAGTGTCAAACACCAATGGGGGCG -ATAAATTCTAGTATGCCATTCCACAATATACACCCTCTCACCATCGGGGA -ATGCCCCAAATATGTGAAATCAAACAGATTAGTCCTTGCGACTGGGCTCA -GAAATAGCCCTCAAAGAGAGAGAAGA---AAAAAGAGAGGATTATTTGGA -GCTATAGCAGGTTTTATAGAGGGGGGATGGCAGGGAATGGTAGATGGTTG -GTATGGGTACCACCATAGCAATGAACAGGGGAGTGGGTACGCTGCAGACA -AAGAATCCACTCAAAAGGCAATAGATGGAGTCACCAATAAGGTCAACTCG -ATCATTGACAAAATGAACACTCAGTTTGAGGCCGTTGGAAGGGAATTTAA -CAACTTAGAAAGGAGAATAGAGAATTTAAACAAGAAGATGGAAGACGGGT -TCCTAGATGTCTGGACTTATAATGCTGAACTTCTGGTTCTCATGGAAAAT -GAGAGAACTCTAGACTTTCATGACTCAAATGTCAAGAACCTTTACGACAA -GGTCCGACTACAGCTTAGGGATAATGCAAAGGAGCTGGGTAACGGTTGTT -TCGAGTTCTATCATAAATGTGATAATGAATGTATGGAAAGTGTAAGAAAT -GGAACGTATGACTACCCGCAGTATTCAGAAGAAGCAAAACTAAAAAGAGA -GGAAATAAGTGGAGTAAAATTGGAATCAATAGGAATTTACCAAATACTGT -CAATTTATTCCACAGTAGCGAGTTCCCTAGCACTGGCAATCATGGTAGCT -GGTCTATCCTTATGGATGTGCTCCAATGGGTCGTTACAATGCAGA--- ->HONGKONG_97_98 -------------------------------------------------GA -CCAGATTTGCATTGGTTACCATGCAAACAACTCGACAGAGCAGGTTGATA -CAATAATGGAAAAGAATGTTACTGTTACACATGCCCAAGACATACTGGAA -AGGACACACGACGGGAAGCTCTGCGATCTAAATGGAGTGAAACCTCTCAT -TTTGAGGGATTGTAGTGTAGCTGGATGGCTCCTCGGAAACCCTATGTGTG -ACGAATTCATCAATGTGCCGGAATGGTCTTACATAGTGGAGAAGGCCAGT -CCAGCCAATGACCTCTGTTATCCAGGGAATTTCAACGACTATGAAGAACT -GAAACACCTATTGAGCAGAATAAACCATTTTGAGAAAATTCAGATCATCC -CCAAAAGTTCTTGGTCCAATCATGATGCCTCATCAGGGGTGAGCTCAGCA -TGTCCATACCTTGGGAGGTCCTCCTTTTTCAGAAATGTGGTATGGCTTAT -CAAAAAGAACAGTGCATACCCAACAATAAAGAGGAGCTACAATAATACCA -ACCAAGAAGATCTTTTGGTACTGTGGGGGATTCACCATCCTAATGATGCG -GCAGAGCAGACAAAGCTCTATCAAAATCCAACCACCTACATTTCCGTTGG -AACATCAACACTGAATCAGAGATTGGTTCCAGAAATAGCTACTAGACCCA -AAGTAAACGGGCAAAGTGGAAGAATGGAGTTCTTCTGGACAATTTTAAAG -CCGAATGATGCCATCAATTTCGAGAGTAATGGAAATTTCATTGCCCCAGA -ATATGCATACAAAATTGTCAAGAAAGGGGACTCAACAATTATGAAAAGTG -AATTGGAATATGGTAACTGCAACACCAAGTGTCAAACTCCAATGGGGGCG -ATAAACTCTAGTATGCCATTCCACAACATACACCCCCTCACCATCGGGGA -ATGCCCCAAATATGTGAAATCAAACAGATTAGTTCTTGCGACTGGACTCA -GAAATACCCCTCATAGGGAGAGAAGAAGAAAAAAGAGAGGACTATTTGGA -GCTATAGCAGGTTTTATAGAAGGAGGATGGCAGGGAATGGTAGATGGTTG -GTATGGGTACCACCATAGCAATGAGCAGGGGAGTGGATACGCTGCAGACC -AAGAATCCACTCAAAAGGCAATAGATGGAGTCACCAATAAGGTCAACTCG -ATCATTAACAAAATGAACACTCAGTTTGAGGCCGTTGGAAGGGAATTTAA -TAACTTAGAAAGGAGAATAGAGAATTTAAACAAGAAAATGGAAGACGGAT -TCCTAGATGTCTGGACTTACAATGCTGAACTTCTGGTTCTCATGGAAAAT -GAGAGAACTCTCGACTTTCATGACTCAAATGTCAAGAACCTTTACGACAA -GGTCCGACTACAGCTTAGGGATAATGCAAAGGAACTGGGTAATGGTTGTT -TCGAATTCTATCACAAATGTGATAATGAATGTATGGAAAGTGTAAAAAAC -GGAACGTATGACTACCCGCAGTATTCAGAAGAAGCAAGACTAAACAGAGA -GGAAATAAGTGGAGTAAAATTGGAATCAATGGGAACTTACCAAATACTGT -CAATTTATTCAACAGTGGCGAGTTCCCTAGCACTGGCAATCATGGTAGCT -GGTCTATCTTTATGGATGTGCTCCAATGGATCGTTACAATGCAGAATT ->GOOSE_SHANTOU_2216_2005 -ATGGAGAAAATAGTGCTTCTTCTTGCAATAATCAGCCTTGTTAAAAGTGA -TCAGATTTGCATTGGTTACCATGCAAACAACTCGACAGAGCAGGTTGACA -CAATAATGGAAAAGAACGTTACTGTTACACATGCCCAAGACATACTGGAA -AAGACACACAATGGGAAGCTCTGCGACTTAGATGGGGTGAAGCCTCTAAT -TTTGAGAGACTGTAGTGTAGCTGGATGGCTCCTCGGGAACCCAATGTGTG -ACGAATTCATCAATGTACCGGAATGGTCTTACATAGTGGAGAAGGCCAGT -CCAGCCAATGACCTCTGTTACCCAGGTGATTTCAACGATTATGAAGAACT -GAAACACCTATTGAGCAGAATAAACCATTTTGAGAAAATTCAGATCATCC -CCAAAAGTTCTTGGTCCAATCATGAAGCCTCATCAGGGGTGAGCTCAGCA -TGTCCATACCTGGGAAAGCCCTCCTTTTTCAGAAATGTGGTATGGCTTAT -CAAAAAGAACAGTGCATACCCAACAATAAAGAGGAGCTACAATAATACCA -ACCAAGAAGATCTTTTGGTACTGTGGGGGATTCACCATCCTAATGATGCG -GCAGAGCAGACAAAGCTCTATCAAAACCCAATCACCTATATTTCCGTTGG -AACATCAACACTAAACCAGAGATTGGTACCAAAAATAGCTACCAGATCCA -AAGTAAACGGGCAAAGTGGAAGGATGGAGTTCTTCTGGACAATTTTAAAA -CCGAATGATTCAATCAACTTCGAGAGTAATGGAAATTTCATTGCTCCAGA -ATATGCATACAAAATTGTCAAGAAAGGGGACTCAGCAATTATGAAAAGCG -AATTGGAATATGGTAACTGCAACACCAAGTGTCAAACTCCAATGGGGGCG -ATAAACTCTAGTATGCCATTCCACAACATACACCCTCTCACCATCGGGGA -ATGCCCCAAATATGTGAAATCAAACAGATTAGTCCTTGCGACTGGGCTCA -GAAATAGCCCTCAAAGAGAGAGAAGAAGAAAGAAGAGAGGACTATTTGGA -GCTATAGCAGGTTTTATAGAGGGAGGATGGCAGGGAATGGTAGATGGTTG -GTATGGATACCACCATAGCAATGAGCAGGGGAGTGGATACGCTGCAGACA -AAGAATCCACTCAAAAGGCAATAGATGGAGTCACCAATAAGGTCAACTCG -ATCATTGACAAAATGAACACTCAGTTTGAGGCCGTTGGAAGGGAATTTAA -TAACTTAGAAAGGAGAATAGAGAATTTAAACAAGAAGATGGAAGACGGAT -TCCTAGATGTCTGGACTTATAATGCTGAACTTCTGGTTCTCATGGAAAAT -GAGAGAACTCTAGACTTTCATGACTCAAATGTCAAGAACCTTTACGACAA -GGTCCGACTACAGCTTAGGGATAATGCAAAAGAGCTAGGTAACGGTTGTT -TCGAGTTCTATCACAAATGTGATAATGAATGCATGGAAAGTGTAAGAAAC -GGAACGTATGACTACCCGCAATATTCAGAAGAAGCAAGGCTAAAAAGAGA -GGAAATTAGTGGAGTAAAATTGGAATCAATAGGAACTTACCAAATACTGT -CAATTTATTCAACAGTGGCAAGTTCCCTAGCGCTGGCAATCATGGTAGCT -GGTCTATCTTTATGGATGTGCTCCAATGGTTCGTTACAATGCAGAATT ->TREESPARROW_HENAN_3_2004 -ATGGAGAAAATAGTGCTTCTTCTTGCAATAGTCAGTCTTGTTAAAAGTGA -TCAGATTTGCATTGGTTACCATGCAAACAACTCGACAGAGCAGGTTGACA -CTATAATGGAAAAGAACGTTACTGTTACACATGCCCAAGACATACTGGAA -AAGACACACAACGGGAAGCTCTGCGATCTAGATGGAGTGAAGCCTCTAAT -TTTGAGAGATTGTAGTGTAGCTGGATGGCTCCTCGGAAACCCAATGTGTG -ACGAATTCATCAATGTGCCGGAATGGTCTTACATAGTGGAGAAGGCCAGT -CCAGCCAATGACCTCTGTTACCCAGGGGATTTCAACGACTATGAAGAACT -GAAACACCTATTGAGCAGAATAAACCATTTTGAGAAAATTCGGATCATCC -CCAAAAGTTCTTGGTCCAATCATGATGCCTCATCAGGGGTGAGCTCAGCA -TGTCCATACCAGGGGAAGCCCTCCTTTTTCAGAAATGTGGTATGGCTTAT -CAAAAAGAACAGTACATACCCAACGATAAAGAGGAGCTACAATAATACCA -ACCCAGAAGATCTTTTGGTACTGTGGGGGATTCACCATCCTAATGATGCG -GCAGAGCAGATAAAGCTCTATCAAAACCCAACCACCTATATTTCCGTTGG -AACATCAACACTAAACCAGAGATTGGTACCAAAAATAGCTACTAGATCCA -AAGTAAATGGGCAAAGTGGAAGAATGGAGTTCTTCTGGACAATTTTAAAG -CCGAATGACGCTATCAACTTCGAGAGTAATGGAAATTTCATTGCTCCAGA -ATATGCATACAAAATTGTCAAGAAAGGGGACTCAGCAATTATGAAAAGTG -AATTGGAATATGGTAACTGCAACACCAAGTGTCAAACTCCAATGGGGGCG -ATAAATTCTAGTATGCCATTCCACAACATACACCCTCTCACCATCGGGGA -ATGCCCCAAATATGTGAAATCAAACAGATTAGTCCTTGCGACAGGGCTCA -GAAATAGCCCTCAAAGAGAGGGAAGAAGAAAAAAGAGAGGACTATTTGGA -GCTATAGCAGGTTTTATAGAGGGAGGATGGCAGGGAATGGTAGATGGTTG -GTATGGGTACCACCATAGCAATGAGCAGGGGAGTGGATACGCTGCAGACA -AAGAATCCACTCAAAAAGCAATAGATGGAGTCACCAATAAGGTCAACTCG -ATCATTGACAAAATGAACACTCAGTTTGAGGCCGTTGGAAGGGAATTTAA -TAACTTAGAAAGGAGAATAGAAAATTTAAACAAGAAGATGGAGGACGGAT -TCCTAGATGTCTGGACTTATAATGCTGAACTTCTGGTTCTCATGGAAAAT -GAGAGAACTCTAGACTTTCATGACTCAAATGTCAAGAACCTTTACGAAAA -GGTCCGACTACAACTTAGGGATAATGCAAAGGAGCTGGGTAACGGTTGTT -TCGAGTTCTATCACAAATGTGATAATGAATGTATGGAAAGTGTAAAAAAC -GGAACGTATGACTACCCGCAGTATACGGAAGAAGCAAGACTAAACAGAGA -GGAAATAAGTGGAGTAAAATTGGAATCAATAGGAACTTACCAAATACTGT -CAATTTATTCAACAGTAGTGAGTTCCCTAGCACTGGCAATCATGGTAGCT -GGTCTATCTTTATGGATGTGCTCCAATGGATCGTTACAATGCAGAATT ->PEREGRINEFALCON_HK_D0028_2004 -ATGGAGAAAATAGTGCTTCTTCTTGCAATAGTCAGTCTTGTTAAAAGTGA -TCAGATTTGCATTGGTTACCATGCAAACAACTCGACAGAGCAGGTTGACA -CAATAATGGAAAAGAATGTTACTGTTACACATGCCCAAGACATACTGGAA -AAGACACACAATGGGAAGCTCTGTGACCTAGATGGGGTGAAGCCTCTAAT -TTTGAGAGATTGTAGTGTCGCTGGATGGCTCCTCGGGAACCCAATGTGTG -ACGAATTCATCAATGTACCGGAATGGTCTTACATAGTGGAGAAGGCCAGT -CCAGCCAATGACCTCTGTTACCCAGGTGATTTCAACGATTATGAAGAACT -GAAACACCTATTGAGCAGAATAAACCATTTTGAGAAAATTCAGATCATCC -CCAAAAGTTCTTGGTCCAATCATGAAGCCTCATCAGGGGTGAGCTCAGCA -TGTCCATACCTGGGAAAGCCCTCCTTTTTCAGAAATGTGGTATGGCTTAT -CAAAAAGAACAGTGCATACCCAACAATAAAGAGGAGCTACAATAATACCA -ACCAAGAAGATCTTTTGGTACTGTGGGGGATTCACCATCCTAATGATGCG -GCAGAGCAGACAAAGCTCTATCAAAACCCAACCACCTATGTTTCCGTTGG -AACATCAACACTAAACCAGAGATTGGTACCAAAAATAGCCACCAGATCCA -AAGTAAACGGGCAAAGTGGAAGGATGGAGTTCTTCTGGACAATTTTAAAA -CCGAATGATGCAATCAACTTCGAGAGTAATGGAAATTTCATTGCTCCAGA -ATATGCATACAAAATTGTCAAGAAAGGGGACTCAGCAATTATGAAAAGTG -AATTGGAATATGGTAACTGCAATACCAAGTGTCAAACTCCAATGGGGGCG -ATAAACTCTAGTATGCCATTCCACAACATACACCCTCTCACCATCGGGGA -ATGCCCCAAATATGTGAAATCAAACAGATTAGTCCTTGCGACTGGGCTCA -GAAATAGCCCTCAAAGAGAGAGAAGAAGAAAAAAGAGAGGACTATTTGGA -GCTATAGCAGGTTTTATAGAGGGAGGATGGCAGGGAATGGTAGATGGTTG -GTATGGATACCACCATAGCAATGAGCAGGGGAGTGGATACGCTGCAGACA -AAGAATCCACTCAAAAGGCAATAGATGGAGTCACCAATAAGGTCAACTCG -ATCATTGACAAAATGAACACTCAGTTTGAGGCCGTTGGAAGGGAATTTAA -TAACTTAGAAAGGAGAATAGAGAATTTAAACAAGAAGATGGAAGACGGAT -TCCTAGATGTCTGGACTTATAATGCTGAACTTCTGGTTCTCATGGAAAAT -GAGAGAACTCTAGACTTTCATGACTCAAATGTCAAGAACCTTTACGACAA -GGTCCGACTACAGCTTAGGGATAATGCAAAAGAGCTGGGTAACGGTTGTT -TCGAGTTCTATCACAAATGTGATAATGAATGTATGGAAAGTGTAAGAAAC -GGAACGTATGACTACCCGCAGTATTCAGAAGAAGCAAGACTAAAAAGAGA -GGAAATAAGTGGAGTAAAATTGGAATCAATAGGAACTTACCAAATACTGT -CAATTTATTCAACAGTGGCGAGTTCCCTAGCGCTGGCAATCATGGTAGCT -GGTCTATCTTTATGGATGTGCTCC------------------------ ->TREESPARROW_HENAN_2_2004 -ATGGAGAAAATAGTGCTTCTTCTTGCAATAGTCAGTCTTGTTAAAAGTGA -TCAGATTTGCATTGGTTACCATGCAAACAACTCGACAGAGCAGGTTGACA -CAATAATGGAAAAGAACGTTACTGTTACACATGCTCAAGACATATTGGAA -AAGACACACAACGGGAAGCTCTGCGACCTAGATGGAGTGAAGCCTCTAAT -TTTGAAAGATTGTAGTGTAGCTGGATGGCTCCTCGGAAACCCAATGTGTG -ACGAATTCATCAATGTGCCGGAGTGGTCTTACATAGTGGAGAAGGCCAGT -CCAGCCAATGACCTCTGTTACCCAGGGGATTTCAACGACTATGAAGAACT -GAAACACCTATTGAGCAGAATAAACCATTTTGAAAAAATTCAGATCATCC -CCAAAAGTTCTTGGTCCGATCATGAAGCCTCATCAGGGGTGAGCTCAGCA -TGTCCATACCTGGGGAAGCCCTCCTTTTTCAGAAATGTGGTATGGCTTAT -CAAAAAGAACAGTACATACCCAACAATAAAGAGGGGCTACAATAATACCA -ACCAAGAAGATCTTTTGGTACTGTGGGGGATTCACCATCCTAATGATGCG -GCAGAGCAGATAAAGCTCTATCAAAACCCAACCACCTATATTTCCGTTGG -AACATCAACACTAAACCAGAGATTGGTACCAAAAATAGCTACTAGATCCA -AAGTAAACGGACAAAGTGGAAGAATGGAGTTCTTCTGGACAATTTTAAAA -CCGAATGATGCTATCAATTTCGAGAGTAATGGAAATTTCATTGCTCCAGA -ATATGCATACAAAATTGTCAAGAAAGGGGACTCTGCAATTATGAAGAGTG -AATTGGAATATGGCAACTGCAACACCAAGTGTCAAACTCCAGTGGGGGCG -ATAAATTCTAGCATGCCATTCCACAACATACACCCTCTCACCATCGGGGA -ATGCCCCAAATATGTGAAATCAAACAGATTAGTCCTTGCGACTGGACTCA -GAAATGCCCCTCAAAGAGAGGGAAGAAGAAAAAAGAGAGGACTATTTGGA -GCTATAGCAGGGTTTATAGAGGGAGGATGGCAGGGGATGGTAGATGGTTG -GTATGGGTACCACCATAGCAATGAGCAGGGGAGTGGATACGCTGCAGACA -AAGAATCCACTCAAAAAGCAATAGATGGAGTCACCAATAAGGTCAACTCG -ATCATTGACAAAATGAACACTCAGTTTGAGGCCGTTGGAAGGGAATTTAA -TAACTTAGAAAGGAGAATAGAAAATTTAAACAAGAAGATGGAGGACGGAT -TCCTAGATGTCTGGACTTATAATGCTGAACTTCTGGTTCTCATGGAAAAT -GAGAGAACTCTAGACTTTCATGACTCAAATGTCAAGAACCTTTACGAAAA -GGTCCGACTACAACTTAGGGATAATGCAAAGGAGCTGGGTAACGGTTGTT -TCGAGTTCTATCACAAATGTGATAATGAATGTATGGAAAGTGTAAAAAAC -GGAACGTATGACTACCGGCTGGACTCAGAAGAAGCAAGACTAAACAGAGA -GGAAATAAGTGGAGTAAAATTGGAATCAATAGGAACTTACCAAATACTGT -CAATTTATTCAACAGTGGCGAGTTCCCTAGCACTGGCAATCATGGTAGCT -GGTCTATCTTTATGGATGTGCTCCAATGGATCGTTACAATGCAGAATT ->HONGKONG_538_97 -------------------------------------------------GA -TCAGATTTGCATTGGTTACCATGCAAACAACTCGACAGAGCAGGTTGACA -CAATAATGGAAAAGAATGTTACTGTTACACATGCCCAAGACATACTGGAA -AGGACACACAACGGGAAGCTCTGCGATCTAAATGGAGTGAAACCTCTCAT -TTTGAGGGATTGTAGTGTAGCTGGATGGCTCCTCGGAAACCCTATGTGTG -ACGAATTCATCAATGTGCCGGAATGGTCTTACATAGTGGAGAAGGCCAGT -CCAGCCAATGACCTCTGTTATCCAGGGAATTTCAACGACTATGAAGAACT -GAAACACCTATTGAGCAGAATAAACCATTTTGAGAAAATTCAGATCATCC -CCAAAAGTTCTTGGTCCAATCATGATGCCTCATCAGGGGTGAGCTCAGCA -TGTCCATACCTTGGGAGGTCCTCCTTTTTCAGAAATGTGGTATGGCTTAT -CAAAAAGAACAGTGCATACCCAACAATAAAGAGGAGCTACAATAATACCA -ACCAAGAAGATCTTTTGGTACTGTGGGGGATTCACCATCCTAATGATGCG -GCAGAGCAGACAAAGCTCTATCAAAATCCAACCACCTACATTTCCGTTGG -AACATCAACACTGAACCAGAGATTGGTTCCAGAAATAGCTACTAGACCCA -AAGTAAACGGGCAAAGTGGAAGAATGGAGTTCTTCTGGACAATTTTAAAG -CCGAATGATGCCATCAATTTCGAGAGTAATGGAAATTTCATTGCCCCAGA -ATATGCATACAAAATTGTCAAGAAAGGGGACTCAACAATTATGAAAAGTG -AATTGGAATATGGTAACTGCAACACCAAGTGTCAAACTCCAATGGGGGCG -ATAAACTCTAGTATGCCATTCCACAACATACACCCCCTCACCATCGGGGA -ATGCCCCAAATATGTGAAATCAAACAGATTAGTTCTTGCGACTGGACTCA -GAAATACCCCTCAAAGGGAGAGAAGAAGAAAAAAGAGAGGACTATTTGGA -GCTATAGCAGGTTTTATAGAGGGAGGATGGCAGGGAATGGTAGATGGTTG -GTATGGGTACCACCATAGCAATGAGCAGGGGAGTGGATACGCTGCAGACC -AAGAATCCACTCAAAAGGCAATAGATGGAGTCACCAATAAGGTCAACTCG -ATCATTAACAAAATGAACACTCAGTTTGAGGCCGTTGGAAGGGAATTTAA -TAACTTAGAAAGGAGAATAGAGAATTTAAACAAGAAAATGGAAGACGGAT -TCCTAGATGTCTGGACTTACAATGCTGAACTTCTGGTTCTCATGGAAAAT -GAGAGAACTCTCGACTTTCATGACTCAAATGTCAAGAACCTTTACGACAA -GGTCCGACTACAGCTTAGGGATAATGCAAAGGAACTGGGTAATGGTTGTT -TCGAATTCTATCACAAATGTGATAATGAATGTATGGAAAGTGTAAGAAAC -GGAACGTATGACTACCCGCAGTATTCAGAAGAAGCAAGACTAAACAGAGA -GGAAATAAGTGGAGTAAAATTGGAATCAATGGGAACTTACCAAATACTGT -CAATTTATTCAACAGTGGCGAGTTCCCTAGCACTGGCAATCATGGTAGCT -GGTCTATCTTTATGGATGTGCTCCAATGGATCGTTACAATGCAGAATT +>BRO1_1 +ATTCTAATTTAAACTATTCT-CTGTTCTTTCATGGGGAAGCAGATTTGGG +TACCACCCAAGTATTGACTCACCCATCAACAACCGCTATGTATTTCGTAC +ATTAC-TGCCAGCCACCATGAATATTGTACGGTACCATAAA-TACTTGAC +CACCTGTAGTACATAAAAACCC-AATCC--ACATCAAAA----CCCCCCC +CC-CATGCTTACAAGCAAGTACAGCAACCAACCCTCAA-CTATCACACAT +CAACTGCAACTCCAAAGCCAC-CCCTCACCCAC-TAGGATACCAACAAAC +CTACCCACCC-TTAACAGTACATAGTACATAAAGCCATTTACCGTACATA +GCACATTACA-GTCAAATCCCTTCTCGTCCCC-ATGG-ATGACCCCCC-T +CAGAT-AGGGGTCCCTTGACCACCATCC +>BRO2 +ATTCTAATTTAAACTATTCT-CTGTTCTTTCATGGGGAAGCAGATTTGGG +TACCACCCAAGTATTGACTCACCCATCAACAACCGCTATGTATTTCGTAC +ATTAC-TGCCAGCCACCATGAATATTGTACGGTACCATAAA-TACTTGAC +CACCTGTAGTACATAAAAACCC-AATCC--ACATCAAAA----CCCCCCC +CC-CATGCTTACAAGCAAGTACAGCAACCAACCCTCAA-CTATCACACAT +CAACTGCAACCCCAAAGCCAC-CCCTCACCCAC-TAGGATACCAACAAAC +CTACCCACCC-TTAACAGTACATAGTGCATAAAGCCATTTACCGTACATA +GCACATTATA-GTCAAATCCCTTCTCGTCCCC-ATGG-ATGACCCCCC-T +CAGAT-AGGGGTCCCTTGACCACCATCC +>BRO3_1 +ATTCTAATTTAAACTATTCT-CTGTTCTTTCATGGGGAAGCAGATTTGGG +TACCACCCAAGTATTGACTCACCCATCAACAACCGCTATGTATTTCGTAC +ATTAC-TGCCAGCCACCATGAATATTGTACGGTACCATAAA-TACTTGAC +CACCTGTAGTACATAAAAACCC-AATCC--ACATCAAAA----CCCCCCC +CC-CATGCTTACAAGCAAGTACAGCAACCAACCCTCAA-CTATCACACAT +CAGCTGCAACTCCAAAGCCAC-CCCTCACCCAC-TAGGATACCAACAAAC +CTACCCACCC-TTAACAGTACATAGTACATAAAGCCATTTACCGTACATA +GCACATTACA-GTCAAATCCCTTCTCGTCCCC-ATGG-ATGACCCCCC-T +CAGAT-AGGGGTCCCTTGACCACCATCC +>BRO4 +ATTCTAATTTAAACTATTCT-CTGTTCTTTCATGGGGAAGCAGATTTGGG +TACCACCCAAGTATTGACTCACCCATCAACAACCGCTATGTATTTCGTAC +ATTAC-TGCCAGCCACCATGAATATTGTACGGTACCATAAA-TACTTGAC +CACCTGTAGTACATAAAAACCC-AATCC--ACATCAAAA----CCCCCCC +CC-CATGCTTACAAGCAAGTACAGCAACCAACCCTCAA-CTATCATACAT +CAACTGCAACTCCAAAGCCAC-CCCTCACCCAC-TAGGATACCAACAAAC +CTACCCACCC-TTAACAGTACATAGTACATAAAGCCATTTACCGTACATA +GCACATTACA-GTCAAATCCCTTCTCGTCCCC-ATGG-ATGACCCCCC-T +CAGAT-AGGGGTCCCTTGACCACCATCC +>BRO5 +ATTCTAATTTAAACTATTCT-CTGTTCTTTCATGGGGAAGCAGATTTGGG +TACCACCCAAGTATTGACTCACCCATCAACAACCGCTATGTATTTCGTAC +ATTAC-TGCCAGCCACCATGAATATTGTACAGTACCATAAA-TACTTGAC +CACCTGTAGTACATAAAAACCC-AATCC--ACACCAAAA----CCCCCCC +CC-CATGCTTACAAGCAAGTACAGCAACCAACCCTCAA-CTATCACACAT +CAACTGCAACTCCAAAGCCAC-CCCTCACCCAC-TAGGATACCAACAAAC +CTACCCACCC-TTAACAGTACATAGTACATAAAGCCATTTACCGTACATA +GCACATTACA-GTCAAATCCCTTCTCGTCCCC-ATGG-ATGACCCCCC-T +CAGAT-AGGGGTCCCTTGACCACCATCC +>BRO6 +ATTCTAATTTAAACTATTCT-CTGTTCTTTCATGGGGAAGCAGATTTGGG +TACCACCCAAGTATTGACTCACCCATCAACAACCGCTATGTATTTCGTAC +ATTAC-TGCCAGCCACCATGAATATTGTACGGTACCATAAA-TACTTGAC +CACCTGTAATACATAAAAACCC-AATTC--ACACCAAAA----CCCCCCC +CC-CATGCTTACAAGCAAGTACAGCAACCAACCCTCAA-CTATCACACAT +CAACTGCAACTCCAAAGCCAC-CCCTCACCCAC-TAGGATACCAACAAAC +CTACCCACCC-TTAACAGTACATAGTACATAAAGCCATTTACCGTACATA +GCACATTACA-GTCAAATCCCTTCTCGTCCCC-ATGG-ATGACCCCCC-T +CAGAT-AGGGGTCCCTTGACCACCATCC +>BRO7_1 +ATTCTAATTTAAACTATTCT-CTGTTCTTTCATGGGGAAGCAGATTTGGG +TACCACCCAAGTATTGACTCACCCATCAACAACCGCTATGTATTTCGTAC +ATTAC-TGCCAGCCACCATGAATATTGTACGGTACCATAAA-TACTTGAC +CACCTGTAGTACATAAAAACCC-AATCC--ACACCAAAA----CCCCCCC +CC-CATGCTTACAAGCAAGTACAGCAACCAACCCTCAA-CTATCACACAT +CAACTGCAACTCCAAAGCCAC-CCCTCACCCAC-TAGGATACCAACAAAC +CTACCCACCC-TTAACAGTACATAGTACATAAAGCCATTTACCGTACATA +GCACATTACA-GTCAAATCCCTTCTCGTCCCC-ATGG-ATGACCCCCC-T +CAGAT-AGGGGTCCCTTGACCACCATCC +>BRO8 +ATTCTAATTTAAACTATTCT-CTGTTCTTTCATGGGGAAGCAGATTTGGG +TACCACCCAAGTATTGACTCACCCATCAACAACCGCTATGTATTTCGTAC +ATTAC-TGCCAGCCACCATGAATATTGTACGGTACCATAAA-TACTTGAC +CACCTGTAGTACATAAAAACCC-AATCC--ACATCAAAA----CCCCCCC +CC-CATGCTTACAAGCAAGTACAGCAACCAACCCTCAA-CTATCACACAT +CAACTGCAACTCCAAAGCCAC-CCCTCACCCAC-TAGAATACCAACAAAC +CTACCCACCC-TTAACAGTACATAGTACATAAAGCCATTTACCGTACATA +GCACATTACA-GTCAAATCCCTTCTCGTCCCC-ATGG-ATGACCCCCC-T +CAGAT-AGGGGTCCCTTGACCACCATCC +>BRO9 +ATTCTAATTTAAACTATTCT-CTGTTCTTTCATGGGGAAGCAGATTTGGG +TACCACCCAAGTATTGACTCACCCATCAACAACCGCTATGTATTTCGTAC +ATTAC-TGCCAGCCACCATGAATATTGTACGGTACCATAAA-TACTTGAC +CACCTGTAGTACATAAAAACCC-AACCC--ACATCAAAA----CCCCCCC +CC-CATGCTTACAAGCAAGTACAGCAACCAACCCTCAA-CTATCACACAT +CAATTGCAACTCCAAAGCCAC-CCCTCACCCAC-TAGGATACCAACAAAC +CTACCCACCC-TTAACAGTACATAGTACATAAAGCCATTTACCGTACATA +GCACATTACA-GTCAAATCCCTTCTCGTCCCC-ATGG-ATGACCCCCC-T +CAGAT-AGGGGTCCCTTGACCACCATCC +>BRO10 +ATTCTAATTTAAACTATTCT-CTGTTCTTTCATGGGGAAGCAGATTTGGG +TACCACCCAAGTATTGACTCACCCATCAACAACCGCTATGTATTTCGTAC +ATTAC-TGCCAGCCACCATGAATATTGTACGGTACCATAAA-TACTTGAC +CACCTGTAGTACATAAAAACCC-AATCC--ACATCAAAA----CCCCCCC +CC-CATGCTTACAAGCAAGTACAGCAATCAACCTTCAA-CTATCACACAT +CAACTGCAACTCCAAAGCCAC-CCCTCACCCAC-TAGGATACCAACAAAC +CTACCCACCC-TTAACAGTACATAGCACATAAAGCCATTTATCGTACATA +GCACATTACA-GTCAAATCCCTTCTCGTCCCC-ATGG-ATGACCCCCC-T +CAGAT-AGGGGTCCCTTGACCACCATCC +>BRO11_1 +ATTCTAATTTAAACTATTCT-CTGTTCTTTCATGGGGAAGCAGATTTGGG +TACCACCCAAGTATTGACTCACCCATCAACAACCGCTATGTATTTCGTAC +ATTAC-TGCCAGCCACCATGAATATTGTACGGTACCATAAA-TACTTGAC +TACCTGTAGTACATAAAAACCC-AACCC--ACATCAAAA----CCCTGCC +CC-CATGCTTACAAGCAAGTACAGCAATCAACCTTCAA-CTGTCACACAT +CAACTGCAACTCCAAAGCCAC-CCCTCACCCAC-TAGGATACCAACAAAC +CTACCCACCC-TTAACAGTACATAGCACATAAAGTCATTTACCGTACATA +GCACATTACA-GTCAAATCCCTTCTCGTCCCC-ATGG-ATGACCCCCC-T +CAGAT-AGGGGTCCCTTGACCACCATCC +>BRO12 +ATTCTAATTTAAACTATTCT-CTGTTCTTTCATGGGGAAGCAGATTTGGG +TACCACCCAAGTATTGACTCACCCATCAACAACCGCTATGTATTTCGTAC +ATTAC-TGCCAGCCACCATGAATATTGTACAGTACCATAAA-TACTTGAC +TACCTGTAGTACATAAAAACCC-AATCC--ACATCAAAA----CCCCCTC +CC-CATGCTTACAAGCAAGTACAGCAATCAACCTTCAA-CTATCACACAT +CAACTGCAACTCCAAAGCCAC-CCCTCACCCAC-TAGGATACCAACAAAC +CTACCCACCC-TTAACAGTACATAGTACATAAAGCCATTTACCGTACATA +GCACATTACA-GTCAAATCCCTTCTCGTCCCC-ATGG-ATGACCCCCC-T +CAGAT-AGGGGTCCCTTGACCACCATCC \ No newline at end of file
--- a/test-data/gard-out1.nex Mon Feb 17 14:52:11 2020 -0500 +++ b/test-data/gard-out1.nex Thu Feb 20 18:10:47 2020 -0500 @@ -1,50 +0,0 @@ -#NEXUS - -BEGIN TAXA; - DIMENSIONS NTAX = 21; - TAXLABELS - 'TREESPARROW_HENAN_1_2004' 'TREESPARROW_HENAN_3_2004' 'TREESPARROW_HENAN_4_2004' 'CHICKEN_HEBEI_326_2005' 'SWINE_ANHUI_2004' 'TREESPARROW_HENAN_2_2004' 'CHICKEN_HONGKONG_915_97' 'GOOSE_HONGKONG_W355_97' 'DUCK_HONGKONG_Y283_97' 'HONGKONG_97_98' 'HONGKONG_538_97' 'DUCK_GUANGZHOU_20_2005' 'GOOSE_SHANTOU_2216_2005' 'PEREGRINEFALCON_HK_D0028_2004' 'CK_HK_WF157_2003' 'HUMAN_VIETNAM_CL105_2005' 'DUCK_VIETNAM_376_2005' 'VIETNAM_3062_2004' 'MALLARD_VIETNAM_16_2003' 'CHICKEN_THAILAND_KANCHANABURI_CK_160_2005' 'DUCK_VIETNAM_272_2005' ; -END; - -BEGIN CHARACTERS; - DIMENSIONS NCHAR = 1698; - FORMAT - DATATYPE = DNA - GAP=- - MISSING=? - ; - -MATRIX - 'TREESPARROW_HENAN_1_2004' ATGGAGAAAATAGTGCTTCTTCGTGCAATGATCAATCTTGTTAAAAGTGATCAGATTGGCGTTGGTTACCATGCAGACTACTCGACAGAGCAGGGTGACACAATAATGGAAAAGAACGTTACTGTTACACATGCTCAAGACATATTGGAAAAGACACACAACGGGAAGCTCTGCGACCTAGATGGAGTGAAGCCTCTAATTTTGAAAGATTGTAGTGTAGCTGGATGGCTCCTCGGAAACCCAATGTGTGACGAATTCATCAATGTGCCGGAGTGGTCTTACATAGTGGAGAAGGCCAGTCCAGCCAATGACCTCTGTTACCCAGGGGATTTCAACGACTATGAAGAACTGAAACACCTATTGAGCAGAATAAACCATTTTGAAAAAATTCAGATCATCCCCAAAAGTTCTTGGTCCGATCATGAAGCCTCATCAGGGGTGAGCTCAGCATGTCCATACCTGGGGAAGCCCTCCTTTTTCAGAAATGTGGTATGGCTTATCAAAAAGAACAGTACATACCCAACAATAAAGAGGGGCTACAATAATACCAACCCAGAAGATCTTTTGGTACTGTGGGGGATTCACCATCCTAATGATGCGGCAGAGCAGATAAAGCTCTATCAAAACCCAACCACCTATATTTCCGTTGGAACATCAACACTAAACCAGAGATTGGTACCAAAAATAGCTACTAGATCCAAAGTAAATGGGCAAAGTGGAAGAATGGAGTTCTTCTGGACAATTTTAAAGCCGAATGACGCTATCAACTTCGAGAGTAATGGAAATTTCATTGCTCCAGAATATGCATACCAAATTGTCAAGAAAGGGGACTCAGCAATTATGAAAAGTGAATTGGAATATGGTAACTGCAACACCAAGTGTCAAACTCCAATGGGGGCGATAAACTCTAGTATGCCATTCCACAACATACACCCTCTCACCATCGGGGAATGCCCCAAATATGTGAAATCAAACAGATTAGTCCTTGCGACAGGGCTCAGAAATAGCCCTCAAAGAGAGAGAAGAAGAAAAAAGAGAGGACTATTTGGAGCTATAGCAGGTTTTATAGAGGGAGGATGGCAGGGAATGGTAGATGGTTGGTATGGGTACCACCATAGCAATGAGCAGGGGAGTGGATACGCTGCAGACAAAGAATCCACTCAAAAAGCAATAGATGGAGTCACCAATAAGGTCAACTCGATCATTGACAAAATGAACACTCAGTTTGAGGCCGTTGGAAGGGAATTTAATAACTTAGAAAGGAGAATAGAAAATTTAAACAAGAAGATGGAGGACGGATTCCTAGATGTCTGGACTTATAATGCTGAACTTCTGGTTCTCATGGAAAATGAGAGAACTCTAGACTTTCATGACTCAAATGTCAAGAACCTTTACGAAAAGGTCCGACTACAACTTAGGGATAATGCAAAGGAGCTGGGTAACGGTTGTTTCGAGTTCTATCACAAATGTGATAATGAATGTATGGAAAGTGTAAAAAACGGAACGTATGACTACCCGCAGTATTCAGAAGAAGCAAGACTAAACAGAGAGGAAATAAGTGGAGTAAAATTGGAATCAATAGGAACTTACCAAATACTGTCAATTTATTCAACAGTGGCGAGTTCCCTAGCACTGGCAATCATGGTAGCTGGTCTATCTTTATGGATGTGCTCCAATGGATCGTTACAATGCAGAATT - 'TREESPARROW_HENAN_3_2004' ATGGAGAAAATAGTGCTTCTTCTTGCAATAGTCAGTCTTGTTAAAAGTGATCAGATTTGCATTGGTTACCATGCAAACAACTCGACAGAGCAGGTTGACACTATAATGGAAAAGAACGTTACTGTTACACATGCCCAAGACATACTGGAAAAGACACACAACGGGAAGCTCTGCGATCTAGATGGAGTGAAGCCTCTAATTTTGAGAGATTGTAGTGTAGCTGGATGGCTCCTCGGAAACCCAATGTGTGACGAATTCATCAATGTGCCGGAATGGTCTTACATAGTGGAGAAGGCCAGTCCAGCCAATGACCTCTGTTACCCAGGGGATTTCAACGACTATGAAGAACTGAAACACCTATTGAGCAGAATAAACCATTTTGAGAAAATTCGGATCATCCCCAAAAGTTCTTGGTCCAATCATGATGCCTCATCAGGGGTGAGCTCAGCATGTCCATACCAGGGGAAGCCCTCCTTTTTCAGAAATGTGGTATGGCTTATCAAAAAGAACAGTACATACCCAACGATAAAGAGGAGCTACAATAATACCAACCCAGAAGATCTTTTGGTACTGTGGGGGATTCACCATCCTAATGATGCGGCAGAGCAGATAAAGCTCTATCAAAACCCAACCACCTATATTTCCGTTGGAACATCAACACTAAACCAGAGATTGGTACCAAAAATAGCTACTAGATCCAAAGTAAATGGGCAAAGTGGAAGAATGGAGTTCTTCTGGACAATTTTAAAGCCGAATGACGCTATCAACTTCGAGAGTAATGGAAATTTCATTGCTCCAGAATATGCATACAAAATTGTCAAGAAAGGGGACTCAGCAATTATGAAAAGTGAATTGGAATATGGTAACTGCAACACCAAGTGTCAAACTCCAATGGGGGCGATAAATTCTAGTATGCCATTCCACAACATACACCCTCTCACCATCGGGGAATGCCCCAAATATGTGAAATCAAACAGATTAGTCCTTGCGACAGGGCTCAGAAATAGCCCTCAAAGAGAGGGAAGAAGAAAAAAGAGAGGACTATTTGGAGCTATAGCAGGTTTTATAGAGGGAGGATGGCAGGGAATGGTAGATGGTTGGTATGGGTACCACCATAGCAATGAGCAGGGGAGTGGATACGCTGCAGACAAAGAATCCACTCAAAAAGCAATAGATGGAGTCACCAATAAGGTCAACTCGATCATTGACAAAATGAACACTCAGTTTGAGGCCGTTGGAAGGGAATTTAATAACTTAGAAAGGAGAATAGAAAATTTAAACAAGAAGATGGAGGACGGATTCCTAGATGTCTGGACTTATAATGCTGAACTTCTGGTTCTCATGGAAAATGAGAGAACTCTAGACTTTCATGACTCAAATGTCAAGAACCTTTACGAAAAGGTCCGACTACAACTTAGGGATAATGCAAAGGAGCTGGGTAACGGTTGTTTCGAGTTCTATCACAAATGTGATAATGAATGTATGGAAAGTGTAAAAAACGGAACGTATGACTACCCGCAGTATACGGAAGAAGCAAGACTAAACAGAGAGGAAATAAGTGGAGTAAAATTGGAATCAATAGGAACTTACCAAATACTGTCAATTTATTCAACAGTAGTGAGTTCCCTAGCACTGGCAATCATGGTAGCTGGTCTATCTTTATGGATGTGCTCCAATGGATCGTTACAATGCAGAATT - 'TREESPARROW_HENAN_4_2004' ATGGAGAAAATAGTGCTTCTTCTTGCAATAGTCAGTCTTGTTAAAAGTGATCAGATTTGCATTGGTTACCATGCAAACAACTCGACAGAGCAGGTTGACACAATAATGCAAAAGAACGTTACTGTTACACATGCCCAAGACATACTGGAAAAGACACACAACGGGAAGCTCTGCGATCTAGATGGAGTGAAACCTCTAATTTTAAGAGATTGTAGTGTAGCTGGATGGCTCCTCGGAAACCCAATGTGTGACGAATTCATCAATGTGCCGGAATGGTCTTACATAGTGGAGAAGGCCAGTCCAGCCAATGACCTCTGTTACCCAGGGGATTTCAACGACTATGAAGAACTGAAACACCTATTGAGCAGAATAAACCATTTTGAGAAAATTCAGATCATCCCCAAAAGTTCTTGGTCCGATCATGAAGCCTCATCAGGGGTGAGCTCAGCATGTCCATACCAGGGGAGTCCCTCCTTTTTCAGAAATGTGGTATGGCTTATCAAAAAGAACAGTGCATACCCAACAATAAAGAGGAGCTACAATAATACCAACCAAGAAGATCTTTTGGTACTGTGGGGGATTCACCATCCTAATGATGCGGCAGAGCAGACAAAGCTCTATCAAAACCCAACCACCTATATTTCCGTTGGAACATCAACACTAAACCAGAGATTGGTACCAAAAATAGCTACTAGATCCAAAGTAAATGGGCAAAGTGGAAGAATGGAGTTCTTCTGGACAATTTTAAAGCCGAATGACGCTATCAACTTCGAGAGTAATGGAAATTTCATTGCTCCAGAATATGCATACAAAATTGTCAAGAAAGGGGACTCAGCAATTATGAAAAGTGAATTGGAATATGGTAACTGCAACACCAAGTGTCAAACTCCAATGGGGGCGATAAACTCTAGTATGCCATTCCACAACATACACCCTCTCACCATCGGGGAATGCCCCAAATATGTGAAATCAAACAGATTAGTCCTTGCGACAGGGCTCAGAAATAGCCCTCAAAGAGAGAGAAGAAGAAAAAAGAGAGGACTATTTGGAGCTATAGCAGGTTTTATAGAGGGAGGATGGCAGGGAATGGTAGATGGTTGGTATGGGTACCACCATAGCAATGAGCAGGGGAGTGGATACGCTGCAGACAAAGAATCCACTCAAAAGGCAATAGATGGAGTCACCAATAAGGTCAACTCGATCATTGACAAAATGAACACTCAGTTTGAGGCCGTTGGAAGGGAATTTAATAACTTAGAAAGGAGAATAGAAAATTTAAACAAGAAGATGGAGGACGGATTCCTAGATGTCTGGACTTATAATGCTGAACTTCTGGTTCTCATGGAAAATGAGAGAACTCTAGACTTTCATGACTCAAATGTCAAGAACCTTTACGAAAAGGTCCGACTACAACTTAGGGATAATGCAAAGGAGCTGGGTAACGGTTGTTTCGAGTTCTATCACAAATGTGATAATGAATGTATGGAAAGTGTAAAAAACGGAACGTATGACTACCCGCAGTATTCAGAAGAAGCAAGACTAAACAGAGAGGAAATAAGTGGAGTAAAATTGGAATCAATAGGAACTTACCAAATACTGTCAATTTATTCAACAGTGGTGAGTTCCCTAGCACTGGCAATCATGGTAGCTGGTCTATCTTTATGGATGTGCTCCAATGGATCGTTACAATGCAGAATT - 'CHICKEN_HEBEI_326_2005' ATGGAGAGAATAGTGCTTCTTCTTGCAATAATCGGTCTTGTTAAAAGTGATCAGATTTGCATTGGTTACCATGCAAACAACTCGACAGAGCAGGTTGACACAATAATGGAAAAGAACGTTACTGTTACACATGCTCAAGACATACTGGAGAAGACACACAACGGGAAGCTCTGCAACCCAGATGGAGTGAAGCCTCTAATTTTGAAAGATTGTAGTGTAGCTGGATGGCTCCTCGGAAACCCAATGTGTGACGAATTTATCAATGTGCCGGAATGGTCTTACATAGTGGAGAAGGCCAGTCCAGCCAATGGCCTCTGTTACCCAGGGGATTTCAATGACTATGAAGAACTGAAACACCTATTGAGCAGAATAAACCATTTTGAGAAAATTCAGATCATCCCCAAAAGTTCTTGGTCCGATCATGGAGCCTCATCAGGGGTGAGCTCAGCATGTTCCTATCTGGGGAAGCCCTCCTTTTTCAGAAATGTGGTATGGCTTATCAAAAAGAATAATACATACCCACCAATAAAGGTGAGCTACAACAATACCAACCAAGAAGATCTTTTGGTACTGTGGGGGATTCACCATCCCAATGATGAGGCAGAGCAGATAAAGATCTATCAAAACCCAACCACCTATATTTCCGTTGGAACATCAACACTAAACCAGAGATTGGTACCAAAAATAGCTACTAGATCCAAAGTAAACGGGCAAAGTGGAAGAATGGAGTTCTTCTGGACAATTTTAAAGCCGAATGATGCTATCAATTTCGATAGTAATGGAAATTTCATTGCTCCAGAATATGCATACAAAATTGTCAAGAAAGGGGACTCAGCGATTATGAAAAGTGAATTGGAATATGGCAACTGCAACACCAAGTGTCAAACTCCAATGGGGGCGATAAATTCTAGTATGCCATTCCACAACATACACCCTCTCACCGTCGGGGAATGCCCCAAATATGTGAAATCAAACAGATTAGTCCTCGCGACTGGACTCAGAAATGCCCCTCAAAGAGAGGGAGGAAGAAAAAAGAGAGGACTATTTGGAGCCATAGCAGGGTTTATAGAGGGAGGATGGCAGGGAATGGTAGATGGTTGGTATGGGTACCACCATAGCAATGAGCAGGGGAGTGGATACGCTGCAGACAAAGAATCCACTCAAAAGGCAATAGATGGAGTCACCAATAAGGTCAACTCGATCATTGACAAAATGAACACTCAGTTTGAGGCCGTTGGAAGGGAATTTAATAACTTAGAAAGGAGAATAGAAAATTTAAACAAGAAGATGGAGGACGGATTCCTAGATGTCTGGACTTATAACGCTGAACTTCTGGTTCTCATGGAAAATGAGAGAACTCTAGACTTTCATGACTCAAATGTCAAGAACCTTTACGAAAAGGTCCGACTACAGCTTAGGGATAATGCAAAGGAGCTGGGTAACGGTTGTTTCGAGTTCTATCACAAATGTGATAATGAATGTATGGAAAGTGTAAAAAACGGAACGTATGACTACCCGCAGTATTCAGAAGAAGCAAGACTAAACAGAGAGGAAATAAGTGGAGTAAAATTGGAATCAATGGGAACTTACCAAATACTGTCAATTTATTCAACAGTGGCGAGTTCCCTAGCATTGGCAATCATGGTAGCTGGTCTATCTTTATGGATGTGCTCCAATGGATCGTTACAATGCAGAATT - 'SWINE_ANHUI_2004' ATGGAGAAAATAGTGCTTCTTCTTGCAATAGTCAGTCTTGTTAAAGGTGATCAGATTTGCACTGGTTACCATGCAAACAACTCGACAGAGCAGGTTGACACAATAATGGAAAAGAACGTTACTGTTACACATGCTCAAGACATACTGGAAAAGACACACAACGGGAAGCTCTGCGACCTAGATGGAGTGAAGCCTCTAATTTTAAGAGATTGTAGTGTAGCTGGATGGCTCCTCGGGAACCCAATGTGTGACGAATTCATCAATGTGCCGGAATGGTCTTACATAGTGGAGAAGGCCAATCCAGCCAATGACCTCTGTTACCCAGGGGATTTCAACGACTATGAAGAACTGAAACACCTATTGAGCAGAATAAACCATTTTGAGAAAATTCAGATCATCCCCAAAAGTTCTTGGTCCGATCATGAAGCCTCATCAGGGGTGAGCTCAGCATGTCCATACCAGGGAAGGTCCTCCTTTTTCAGAAATGTGGTATGGCTTATCAAAAAGAACAGTGCATACCCAACAATAAAGAGGAGCTACAATAATACCAACCAAGAAGATCTTTTGGTACTGTGGGGGATTCACCACCCTAATGATGCGGCAGAGCAGATAAAGCTCTATCAAAACCCAACCACCTATATTTCCGTTGGGACATCAACACTAAACCAGAGATTGGTACCAAAAATAGCTACTAGATCCAAAGTAAACGGACAAAGTGGAAGAATGGAGTTCTTCTGGACAATTTTAAAACCGAATGATGCTATCAATTTCGAGAGTAATGGAAATTTCATTGCTCCAGAATATGCATACAAAATTGTCAAGAAAGGGGACTCTGCAATTATGAAAAGTGAATTGGAATATGGCAACTGCAACACCAAGTGTCAAACTCCAGTGGGGGCGATAAATTCTAGCATGCCATTCCACAACATACACCCTCTCACCATCGGGGAATGCCCCAAATATGTGAAATCAAACAGATTAGTCCTTGCGACTGGACTCAGAAATGCCCCTCAAAGAGAGGGAAGAAGAAAAAAGAGAGGACTATTTGGAGCTATAGCAGGGTTTATAGAGGGAGGATGGCAGGGGATGGTAGATGGTTGGTATGGGTACCACCATAGCAATGAGCAGGGGAGTGGATACGCTGCAGACAAAGAATCCACTCAAAAAGCAATAGATGGAGTCACCAATAAGGTCAACTCGATCATTGACAAAATGAACACTCAGTTTGAGGCCGTTGGAAGGGAATTTAATAACTTAGAAAGGAGAATAGAAAATTTAAACAAGAAGATGGAGGACGGATTCCTAGATGTCTGGACTTATAATGCTGAACTTCTGGTTCTCATGGAAAATGAGAGAACTCTAGACTTTCATGACTCAAATGTCAAGAACCTTTACGACAAGGTCCGACTACAGCTTAGGGATAATGCAAAGGAGCTGGGTAACGGTTGTTTCGAGTTCTATCACAGATGTGATAATGAATGTATGGAAAGTGTAAGAAACGGAACGTATGACTACCCGCAGTATTCGGAAGAAGCAAGACTAAACAGAGAGGAAATAAGTGGAGTAAAATTGGAATCAATAGGAACTTACCAAATACTGTCAATTTATTCAACAGTGGCGAGTTCCCTAGCACTGGCAATCATGGTGGCTGGTCTATCTTTATGGATGTGCTCCAATGGATCGTTACAATGCAGAATT - 'TREESPARROW_HENAN_2_2004' ATGGAGAAAATAGTGCTTCTTCTTGCAATAGTCAGTCTTGTTAAAAGTGATCAGATTTGCATTGGTTACCATGCAAACAACTCGACAGAGCAGGTTGACACAATAATGGAAAAGAACGTTACTGTTACACATGCTCAAGACATATTGGAAAAGACACACAACGGGAAGCTCTGCGACCTAGATGGAGTGAAGCCTCTAATTTTGAAAGATTGTAGTGTAGCTGGATGGCTCCTCGGAAACCCAATGTGTGACGAATTCATCAATGTGCCGGAGTGGTCTTACATAGTGGAGAAGGCCAGTCCAGCCAATGACCTCTGTTACCCAGGGGATTTCAACGACTATGAAGAACTGAAACACCTATTGAGCAGAATAAACCATTTTGAAAAAATTCAGATCATCCCCAAAAGTTCTTGGTCCGATCATGAAGCCTCATCAGGGGTGAGCTCAGCATGTCCATACCTGGGGAAGCCCTCCTTTTTCAGAAATGTGGTATGGCTTATCAAAAAGAACAGTACATACCCAACAATAAAGAGGGGCTACAATAATACCAACCAAGAAGATCTTTTGGTACTGTGGGGGATTCACCATCCTAATGATGCGGCAGAGCAGATAAAGCTCTATCAAAACCCAACCACCTATATTTCCGTTGGAACATCAACACTAAACCAGAGATTGGTACCAAAAATAGCTACTAGATCCAAAGTAAACGGACAAAGTGGAAGAATGGAGTTCTTCTGGACAATTTTAAAACCGAATGATGCTATCAATTTCGAGAGTAATGGAAATTTCATTGCTCCAGAATATGCATACAAAATTGTCAAGAAAGGGGACTCTGCAATTATGAAGAGTGAATTGGAATATGGCAACTGCAACACCAAGTGTCAAACTCCAGTGGGGGCGATAAATTCTAGCATGCCATTCCACAACATACACCCTCTCACCATCGGGGAATGCCCCAAATATGTGAAATCAAACAGATTAGTCCTTGCGACTGGACTCAGAAATGCCCCTCAAAGAGAGGGAAGAAGAAAAAAGAGAGGACTATTTGGAGCTATAGCAGGGTTTATAGAGGGAGGATGGCAGGGGATGGTAGATGGTTGGTATGGGTACCACCATAGCAATGAGCAGGGGAGTGGATACGCTGCAGACAAAGAATCCACTCAAAAAGCAATAGATGGAGTCACCAATAAGGTCAACTCGATCATTGACAAAATGAACACTCAGTTTGAGGCCGTTGGAAGGGAATTTAATAACTTAGAAAGGAGAATAGAAAATTTAAACAAGAAGATGGAGGACGGATTCCTAGATGTCTGGACTTATAATGCTGAACTTCTGGTTCTCATGGAAAATGAGAGAACTCTAGACTTTCATGACTCAAATGTCAAGAACCTTTACGAAAAGGTCCGACTACAACTTAGGGATAATGCAAAGGAGCTGGGTAACGGTTGTTTCGAGTTCTATCACAAATGTGATAATGAATGTATGGAAAGTGTAAAAAACGGAACGTATGACTACCGGCTGGACTCAGAAGAAGCAAGACTAAACAGAGAGGAAATAAGTGGAGTAAAATTGGAATCAATAGGAACTTACCAAATACTGTCAATTTATTCAACAGTGGCGAGTTCCCTAGCACTGGCAATCATGGTAGCTGGTCTATCTTTATGGATGTGCTCCAATGGATCGTTACAATGCAGAATT - 'CHICKEN_HONGKONG_915_97' ATGGAGAAAATAGTGCTTCTTCTTGCAACAGTCAGTCTTGTTAAAAGTGATCAGATTTGCATTGGTTACCATGCAAACAACTCGACAGAGCAGGTTGACACAATAATGGAAAAGAATGTTACTGTTACACATGCCCAAGACATACTGGAAAGGACACACAACGGGAAGCTCTGCGATCTAAATGGAGTGAAACCTCTCATTTTGAGGGATTGTAGTGTAGCTGGATGGCTCCTCGGAAACCCTATGTGTGACGAATTCATCAATGTGCCGGAATGGTCTTACATAGTGGAGAAGGCCAGTCCAGCCAATGACCTCTGTTATCCAGGGAATTTCAACGACTATGAAGAACTGAAACACCTATTGAGCAGAATAAACCATTTTGAGAAAATTCAGATCATCCCCAAAAGTTCTTGGTCCAATCATGATGCCTCATCAGGGGTGAGCTCAGCATGTCCATACCTTGGGAGGTCCTCCTTTTTCAGAAATGTGGTATGGCTTATCAAAAAGAACAGTGCATACCCAACAATAAAGAGGAGCTACAATAATACCAACCAAGAAGATCTTTTGGTACTGTGGGGGATTCACCATCCTAATGATGCGGCAGAGCAGACAAAGCTCTATCAAAATCCAACCACCTACATTTCCGTTGGAACATCAACACTGAACCAGAGATTGGTTCCAGAAATAGCTACTAGACCCAAAGTAAACGGGCAAAGTGGAAGAATGGAGTTCTTCTGGACAATTTTAAAGCCGAATGATGCCATCAATTTCGAGAGTAATGGAAATTTCATTGCCCCAGAATATGCATACAAAATTGTCAAGAAAGGGGACTCAACAATTATGAAAAGTGAATTGGAATATGGTAACTGCAACACCAAGTGTCAAACTCCAATGGGGGCGATAAACTCTAGTATGCCATTCCACAACATACACCCCCTCACCATCGGGGAATGCCCCAAATATGTGAAATCAAACAGATTAGTTCTTGCGACTGGACTCAGAAATACCCCTCAAAGGGAGAGAAGAAGAAAAAAGAGAGGACTATTTGGAGCTATAGCAGGTTTTATAGAGGGAGGATGGCAGGGCATGGTAGATGGTTGGTATGGGTACCACCATAGCAATGAGCAGGGGAGTGGATACGCTGCAGACAAAGAATCCACTCAAAAGGCAATAGATGGAGTCACCAATAAGGTCAACTCGATCATTAACAAAATGAACACTCAGTTTGAGGCCGTTGGAAGGGAATTTAATAACTTAGAAAGGAGAATAGAGAATTTAAACAAGAAAATGGAAGACGGATTCCTAGATGTCTGGACTTACAATGCTGAACTTCTGGTTCTCATGGAAAATGAGAGAACTCTCGACTTTCATGACTCAAATGTCAAGAACCTTTACGACAAGGTCCGACTACAGCTTAGGGATAATGCAAAGGAACTGGGTAATGGTTGTTTCGAATTCTATCACAAATGTGATAATGAATGTATGGAAAGTGTAAAAAACGGAACGTATGACTACCCGCAGTATTCAGAAGAAGCAAGACTAAACAGAGAGGAAATAAGTGGAGTAAAATTGGAATCAATGGGAACTTACCAAATACTGTCAATTTATTCAACAGTGGCGAGTTCCCTAGCACTGGCAATCATGGTAGCTGGTCTATCTTTATGGATGTGCTCCAATGGATCGTTACAATGCAGAATT - 'GOOSE_HONGKONG_W355_97' ATGGAGAAAATAGTGCTTCTTCTTGCAACAGTCAGTCTTGTTAAAAGTGATCAGATTTGCATTGGTTACCATGCAAACAACTCGACAGAGCAGGTTGACACAATAATGGAAAAGAATGTTACTGTTACACATGCCCAAGACATACTGGAAAGGACACACAACGGGAAGCTCTGCGATCTAAATGGAGTGAAACCTCTCATTTTGAGGGATTGTAGTGTAGCTGGATGGCTCCTCGGAAACCCTATGTGTGACGAATTCATCAATGTGCCGGAATGGTCTTACATAGTGGAGAAGGCCAGTCCAGCCAATGACCTCTGTTATCCAGGGAATTTCAACGACTATGAAGAACTGAAACACCTATTGAGCAGAATAAACCATTTTGAGAAAATTCAGATCATCCCCAAAAGTTCTTGGTCCAATCATGATGCCTCATCAGGGGTTAGCTCAGCATGTCCATACCTTGGGAGGTCCTCCTTTTTCAGAAATGTGGTATGGCTTATCAAAAAGAACAGTGCATACCCAACAATAAAGAGGAGCTACAATAATACCAACCAAGAAGATCTTTTGGTACTGTGGGGGATTCACCATCCTAATGATGCGGCAGAGCAGACAAAGCTTTATCAAAATCCAACCACCTACATTTCCGTTGGAACATCAACACTGAACCAGAGATTGGTTCCAGAAATAGCTACTAGACCCAAAGTAAACGGGCAAAGTGGAAGAATGGAGTTCTTCTGGACAATTTTAAAGCCGAATGATGCCATCAATTTCGAGAGTAATGGAAATTTCATTGCCCCAGAATATGCATACAAAATTGTCAAGAAAGGGGACTCAACAATTATGAAAAGTGAATTGGAATATGGTAACTGCAACACCAAGTGTCAAACTCCAATGGGGGCGATAAACTCTAGTATGCCATTCCACAACATACACCCCCTCACCATCGGGGAATGCCCCAAATATGTGAAATCAAACAGATTAGTTCTTGCGACTGGACTCAGAAATACCCCTCAAAGGGAGAGAAGAAGAAAAAAGAGAGGACTATTTGGAGCTATAGCAGGTTTTATAGAGGGAGGATGGCAGGGCATGGTAGATGGTTGGTATGGGTACCACCATAGCAATGAGCAGGGGAGTGGATACGCTGCAGACAAAGAATCCACTCAAAAGGCAATAGATGGAGTCACCAATAAGGTCAACTCGATCATTAACAAAATGAACACTCAGTTTGAGGCCGTTGGAAGGGAATTTAATAACTTAGAAAGGAGAATAGAGAATTTAAACAAGAAAATGGAAGACGGATTCCTAGATGTCTGGACTTACAATGCTGAACTTCTGGTTCTCATGGAAAATGAGAGAACTCTCGACTTTCATGACTCAAATGTCAAGAACCTTTACGACAAGGTCCGACTACAGCTTAGGGATAATGCAAAGGAACTGGGTAATGGTTGTTTCGAATTCTATCACAAATGTGATAATGAATGTATGGAAAGTGTAAGAAACGGAACGTATGACTACCCGCAGTATTCAGAAGAAGCAAGACTAAACAGAGAGGAAATAAGTGGAGTAAAATTGGAATCAATGGGAACTTACCAAATACTGTCAATTTATTCAACAGTGGCGAGTTCCCTAGCACTGGCAATCATGGTAGCTGGTCTATCTTTATGGATGTGCTCCAATGGATCGTTACAATGCAGAATT - 'DUCK_HONGKONG_Y283_97' ATGGAGAAAATAGTGCTTCTTCTTGCAACAGTCAGTCTTGTTAAAAGTGATCAGATTTGCATTGGTTACCATGCAAACAACTCGACAGAGCAGGTTGACACAATAATGGAAAAGAATGTTACTGTTACACATGCCCAAGACATACTGGAAAGGACACACAACGGGAAGCTCTGCGATCTAAATGGAGTGAAACCTCTCATTTTGAGGGATTGTAGTGTAGCTGGATGGCTCCTCGGAAACCCTATGTGTGACGAATTCATCAATGTGCCGGAATGGTCTTACATAGTGGAGAAGGCCAGTCCAGCCAATGACCTCTGTTATCCAGGGAATTTCAACGACTATGAAGAACTGAAACACCTATTGAGCAGAATAAACCATTTTGAGAAAATTCAGATCATCCCCAAAAGTTCTTGGTCCAATCATGATGCCTCATCAGGGGTTAGCTCAGCATGTCCATACCTTGGGAGGTCCTCCTTTTTCAGAAATGTGGTATGGCTTATCAAAAAGAACAGTGCATACCCAACAATAAAGAGGAGCTACAATAATACCAACCAAGAAGATCTTTTGGTACTGTGGGGGATTCACCATCCTAATGATGCGGCAGAGCAGACAAAGCTTTATCAAAATCCAACCACCTACATTTCCGTTGGAACATCAACACTGAACCAGAGATTGGTTCCAGAAATAGCTACTAGACCCAAAGTAAACGGGCAAAGTGGAAGAATGGAGTTCTTCTGGACAATTTTAAAGCCGAATGATGCCATCAATTTCGAGAGTAATGGAAATTTCATTGCCCCAGAATATGCATACAAAATTGTCAAGAAAGGGGACTCAACAATTATGAAAAGTGAATTGGAATATGGTAACTGCAACACCAAGTGTCAAACTCCAATGGGGGCGATAAACTCTAGTATGCCATTCCACAACATACACCCCCTCACCATCGGGGAATGCCCCAAATATGTGAAATCAAACAGATTAGTTCTTGCGACTGGACTCAGAAATACCCCTCAAAGGGAGAGAAGAAGAAAAAAGAGAGGACTATTTGGAGCTATAGCAGGTTTTATAGAGGGAGGATGGCAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- - 'HONGKONG_97_98' ------------------------------------------------GACCAGATTTGCATTGGTTACCATGCAAACAACTCGACAGAGCAGGTTGATACAATAATGGAAAAGAATGTTACTGTTACACATGCCCAAGACATACTGGAAAGGACACACGACGGGAAGCTCTGCGATCTAAATGGAGTGAAACCTCTCATTTTGAGGGATTGTAGTGTAGCTGGATGGCTCCTCGGAAACCCTATGTGTGACGAATTCATCAATGTGCCGGAATGGTCTTACATAGTGGAGAAGGCCAGTCCAGCCAATGACCTCTGTTATCCAGGGAATTTCAACGACTATGAAGAACTGAAACACCTATTGAGCAGAATAAACCATTTTGAGAAAATTCAGATCATCCCCAAAAGTTCTTGGTCCAATCATGATGCCTCATCAGGGGTGAGCTCAGCATGTCCATACCTTGGGAGGTCCTCCTTTTTCAGAAATGTGGTATGGCTTATCAAAAAGAACAGTGCATACCCAACAATAAAGAGGAGCTACAATAATACCAACCAAGAAGATCTTTTGGTACTGTGGGGGATTCACCATCCTAATGATGCGGCAGAGCAGACAAAGCTCTATCAAAATCCAACCACCTACATTTCCGTTGGAACATCAACACTGAATCAGAGATTGGTTCCAGAAATAGCTACTAGACCCAAAGTAAACGGGCAAAGTGGAAGAATGGAGTTCTTCTGGACAATTTTAAAGCCGAATGATGCCATCAATTTCGAGAGTAATGGAAATTTCATTGCCCCAGAATATGCATACAAAATTGTCAAGAAAGGGGACTCAACAATTATGAAAAGTGAATTGGAATATGGTAACTGCAACACCAAGTGTCAAACTCCAATGGGGGCGATAAACTCTAGTATGCCATTCCACAACATACACCCCCTCACCATCGGGGAATGCCCCAAATATGTGAAATCAAACAGATTAGTTCTTGCGACTGGACTCAGAAATACCCCTCATAGGGAGAGAAGAAGAAAAAAGAGAGGACTATTTGGAGCTATAGCAGGTTTTATAGAAGGAGGATGGCAGGGAATGGTAGATGGTTGGTATGGGTACCACCATAGCAATGAGCAGGGGAGTGGATACGCTGCAGACCAAGAATCCACTCAAAAGGCAATAGATGGAGTCACCAATAAGGTCAACTCGATCATTAACAAAATGAACACTCAGTTTGAGGCCGTTGGAAGGGAATTTAATAACTTAGAAAGGAGAATAGAGAATTTAAACAAGAAAATGGAAGACGGATTCCTAGATGTCTGGACTTACAATGCTGAACTTCTGGTTCTCATGGAAAATGAGAGAACTCTCGACTTTCATGACTCAAATGTCAAGAACCTTTACGACAAGGTCCGACTACAGCTTAGGGATAATGCAAAGGAACTGGGTAATGGTTGTTTCGAATTCTATCACAAATGTGATAATGAATGTATGGAAAGTGTAAAAAACGGAACGTATGACTACCCGCAGTATTCAGAAGAAGCAAGACTAAACAGAGAGGAAATAAGTGGAGTAAAATTGGAATCAATGGGAACTTACCAAATACTGTCAATTTATTCAACAGTGGCGAGTTCCCTAGCACTGGCAATCATGGTAGCTGGTCTATCTTTATGGATGTGCTCCAATGGATCGTTACAATGCAGAATT - 'HONGKONG_538_97' ------------------------------------------------GATCAGATTTGCATTGGTTACCATGCAAACAACTCGACAGAGCAGGTTGACACAATAATGGAAAAGAATGTTACTGTTACACATGCCCAAGACATACTGGAAAGGACACACAACGGGAAGCTCTGCGATCTAAATGGAGTGAAACCTCTCATTTTGAGGGATTGTAGTGTAGCTGGATGGCTCCTCGGAAACCCTATGTGTGACGAATTCATCAATGTGCCGGAATGGTCTTACATAGTGGAGAAGGCCAGTCCAGCCAATGACCTCTGTTATCCAGGGAATTTCAACGACTATGAAGAACTGAAACACCTATTGAGCAGAATAAACCATTTTGAGAAAATTCAGATCATCCCCAAAAGTTCTTGGTCCAATCATGATGCCTCATCAGGGGTGAGCTCAGCATGTCCATACCTTGGGAGGTCCTCCTTTTTCAGAAATGTGGTATGGCTTATCAAAAAGAACAGTGCATACCCAACAATAAAGAGGAGCTACAATAATACCAACCAAGAAGATCTTTTGGTACTGTGGGGGATTCACCATCCTAATGATGCGGCAGAGCAGACAAAGCTCTATCAAAATCCAACCACCTACATTTCCGTTGGAACATCAACACTGAACCAGAGATTGGTTCCAGAAATAGCTACTAGACCCAAAGTAAACGGGCAAAGTGGAAGAATGGAGTTCTTCTGGACAATTTTAAAGCCGAATGATGCCATCAATTTCGAGAGTAATGGAAATTTCATTGCCCCAGAATATGCATACAAAATTGTCAAGAAAGGGGACTCAACAATTATGAAAAGTGAATTGGAATATGGTAACTGCAACACCAAGTGTCAAACTCCAATGGGGGCGATAAACTCTAGTATGCCATTCCACAACATACACCCCCTCACCATCGGGGAATGCCCCAAATATGTGAAATCAAACAGATTAGTTCTTGCGACTGGACTCAGAAATACCCCTCAAAGGGAGAGAAGAAGAAAAAAGAGAGGACTATTTGGAGCTATAGCAGGTTTTATAGAGGGAGGATGGCAGGGAATGGTAGATGGTTGGTATGGGTACCACCATAGCAATGAGCAGGGGAGTGGATACGCTGCAGACCAAGAATCCACTCAAAAGGCAATAGATGGAGTCACCAATAAGGTCAACTCGATCATTAACAAAATGAACACTCAGTTTGAGGCCGTTGGAAGGGAATTTAATAACTTAGAAAGGAGAATAGAGAATTTAAACAAGAAAATGGAAGACGGATTCCTAGATGTCTGGACTTACAATGCTGAACTTCTGGTTCTCATGGAAAATGAGAGAACTCTCGACTTTCATGACTCAAATGTCAAGAACCTTTACGACAAGGTCCGACTACAGCTTAGGGATAATGCAAAGGAACTGGGTAATGGTTGTTTCGAATTCTATCACAAATGTGATAATGAATGTATGGAAAGTGTAAGAAACGGAACGTATGACTACCCGCAGTATTCAGAAGAAGCAAGACTAAACAGAGAGGAAATAAGTGGAGTAAAATTGGAATCAATGGGAACTTACCAAATACTGTCAATTTATTCAACAGTGGCGAGTTCCCTAGCACTGGCAATCATGGTAGCTGGTCTATCTTTATGGATGTGCTCCAATGGATCGTTACAATGCAGAATT - 'DUCK_GUANGZHOU_20_2005' ATGGAGAAAATAGTGCTTCTTCTTGCAATAGTCAGTCTTGTTAAAAGTGATCAGATTTGCATTGGTTACCATGCAAACAACTCGACAGAGCAGGTTGACACAATAATGGAAAAGAACGTTACTGTTACACATGCCCAAGACATACTGGAAAAGACACACAATGGGAAGCTCTGCGACCTAGATGGGGTGAAGCCTCTAATTTTGAGAGATTGTAGTGTAGCTGGATGGCTCCTCGGGAACCCAATGTGTGACGAATTCATCAATGTACCGGAATGGTCTTACATAGTGGAGAAGGCCAATCCAGCCAATGACCTCTGTTACCCAGGTGATTTCAACGATTATGAAGAACTGAAACACCTATTGAGCAGAATAAACCATTTTGAGAAAATTCAGATCATCCCCAAAAGTTCTTGGTCCAACCATGAATCCTCATCAGGGGTGAGCTCAGCATGTCCATACCTGGGAAAGCCCTCCTTTTTCAGAAATGTGGTATGGCTTATCAAAAAGAACAATGCATACCCAACAATAAAGAAGAGCTACAATAATACCAACCAAGAAGATCTTTTGGTACTGTGGGGGATTCACCATCCTAATGATGCGACAGAGCAGACAAAGCTCTATCAAAACCCAACCACTTATATTTCCGTTGGAACATCAACACTAAACCAGAGATTGGTACCAAAAATAGCTACCAGATCCAAAGTAAACGGGCAAAGTGGAAGGATGGAGTTCTTCTGGACAATTTTAAAACCGAATGATGCAATCAACTTCGAGAGTAATGGAAATTTCATTGCTCCAGAATATGCATACAAAATTGTCAAGAAAGGGGACTCAGCAATTATGAAAAGTGAATTGGAATATGGTAACTGCAACACCAAATGTCAAACTCCAATGGGGGCGATAAACTCTAGTATGCCATTCCACAACATACACCCTCTCACCATCGGGGAATGCCCCAAATATGTGAAATCAAACAGATTAGTCCTTGCGACTGGGCTCAGAAATAGCCCTCAAAGGGAGAGAAGAAGAAAGAAGAGAGGACTATTTGGAGCTATAGCAGGTTTTATAGAGGGAGGATGGCAGGGAATGGTAGATGGTTGGTATGGATACCACCATAGCAATGAGCAGGGGAGTGGATACGCTGCAGACAAAGAATCCACTCAAAAGGCAATAGATGGAGTCACCAATAAGGTCAACTCGATCATTGACAAAATGAACACTCAGTTTGAGGCCGTTGGAAGGGAATTTAATAACTTAGAAAGGAGAATAGAGAATTTAAACAAGAAGATGGAAGACGGATTCCTAGATGTCTGGACTTATAATGCTGAACTTCTGGTTCTCATGGAAAATGAGAGAACTCTAGACTTTCATGACTCAAATGTCAGGAACCTTTACGACAAGGTCCGACTACAGCTTAGGGATAATGCAAAAGAGCTGGGTAACGGTTGTTTCGAGTTCTATCACAAATGTGATGATGAATGCATGGAAAGTGTAAGAAACGGAACGTATGACTACCCGCAGTATTCAGAAGAAGCAAGGCTAAAAAGAGAGGAAATAAGTGGAGTAAAATTGGAATCAATAGGAACTTACCAAATACTGTCAATTTATTCAACAGTGGCAAGTTCCCTAGCGCTGGCAATCATGGTAGCTGGTCTATCTTTATGGATGTGCTCCAATGGTTCGTTACAATGCAGAATT - 'GOOSE_SHANTOU_2216_2005' ATGGAGAAAATAGTGCTTCTTCTTGCAATAATCAGCCTTGTTAAAAGTGATCAGATTTGCATTGGTTACCATGCAAACAACTCGACAGAGCAGGTTGACACAATAATGGAAAAGAACGTTACTGTTACACATGCCCAAGACATACTGGAAAAGACACACAATGGGAAGCTCTGCGACTTAGATGGGGTGAAGCCTCTAATTTTGAGAGACTGTAGTGTAGCTGGATGGCTCCTCGGGAACCCAATGTGTGACGAATTCATCAATGTACCGGAATGGTCTTACATAGTGGAGAAGGCCAGTCCAGCCAATGACCTCTGTTACCCAGGTGATTTCAACGATTATGAAGAACTGAAACACCTATTGAGCAGAATAAACCATTTTGAGAAAATTCAGATCATCCCCAAAAGTTCTTGGTCCAATCATGAAGCCTCATCAGGGGTGAGCTCAGCATGTCCATACCTGGGAAAGCCCTCCTTTTTCAGAAATGTGGTATGGCTTATCAAAAAGAACAGTGCATACCCAACAATAAAGAGGAGCTACAATAATACCAACCAAGAAGATCTTTTGGTACTGTGGGGGATTCACCATCCTAATGATGCGGCAGAGCAGACAAAGCTCTATCAAAACCCAATCACCTATATTTCCGTTGGAACATCAACACTAAACCAGAGATTGGTACCAAAAATAGCTACCAGATCCAAAGTAAACGGGCAAAGTGGAAGGATGGAGTTCTTCTGGACAATTTTAAAACCGAATGATTCAATCAACTTCGAGAGTAATGGAAATTTCATTGCTCCAGAATATGCATACAAAATTGTCAAGAAAGGGGACTCAGCAATTATGAAAAGCGAATTGGAATATGGTAACTGCAACACCAAGTGTCAAACTCCAATGGGGGCGATAAACTCTAGTATGCCATTCCACAACATACACCCTCTCACCATCGGGGAATGCCCCAAATATGTGAAATCAAACAGATTAGTCCTTGCGACTGGGCTCAGAAATAGCCCTCAAAGAGAGAGAAGAAGAAAGAAGAGAGGACTATTTGGAGCTATAGCAGGTTTTATAGAGGGAGGATGGCAGGGAATGGTAGATGGTTGGTATGGATACCACCATAGCAATGAGCAGGGGAGTGGATACGCTGCAGACAAAGAATCCACTCAAAAGGCAATAGATGGAGTCACCAATAAGGTCAACTCGATCATTGACAAAATGAACACTCAGTTTGAGGCCGTTGGAAGGGAATTTAATAACTTAGAAAGGAGAATAGAGAATTTAAACAAGAAGATGGAAGACGGATTCCTAGATGTCTGGACTTATAATGCTGAACTTCTGGTTCTCATGGAAAATGAGAGAACTCTAGACTTTCATGACTCAAATGTCAAGAACCTTTACGACAAGGTCCGACTACAGCTTAGGGATAATGCAAAAGAGCTAGGTAACGGTTGTTTCGAGTTCTATCACAAATGTGATAATGAATGCATGGAAAGTGTAAGAAACGGAACGTATGACTACCCGCAATATTCAGAAGAAGCAAGGCTAAAAAGAGAGGAAATTAGTGGAGTAAAATTGGAATCAATAGGAACTTACCAAATACTGTCAATTTATTCAACAGTGGCAAGTTCCCTAGCGCTGGCAATCATGGTAGCTGGTCTATCTTTATGGATGTGCTCCAATGGTTCGTTACAATGCAGAATT - 'PEREGRINEFALCON_HK_D0028_2004' ATGGAGAAAATAGTGCTTCTTCTTGCAATAGTCAGTCTTGTTAAAAGTGATCAGATTTGCATTGGTTACCATGCAAACAACTCGACAGAGCAGGTTGACACAATAATGGAAAAGAATGTTACTGTTACACATGCCCAAGACATACTGGAAAAGACACACAATGGGAAGCTCTGTGACCTAGATGGGGTGAAGCCTCTAATTTTGAGAGATTGTAGTGTCGCTGGATGGCTCCTCGGGAACCCAATGTGTGACGAATTCATCAATGTACCGGAATGGTCTTACATAGTGGAGAAGGCCAGTCCAGCCAATGACCTCTGTTACCCAGGTGATTTCAACGATTATGAAGAACTGAAACACCTATTGAGCAGAATAAACCATTTTGAGAAAATTCAGATCATCCCCAAAAGTTCTTGGTCCAATCATGAAGCCTCATCAGGGGTGAGCTCAGCATGTCCATACCTGGGAAAGCCCTCCTTTTTCAGAAATGTGGTATGGCTTATCAAAAAGAACAGTGCATACCCAACAATAAAGAGGAGCTACAATAATACCAACCAAGAAGATCTTTTGGTACTGTGGGGGATTCACCATCCTAATGATGCGGCAGAGCAGACAAAGCTCTATCAAAACCCAACCACCTATGTTTCCGTTGGAACATCAACACTAAACCAGAGATTGGTACCAAAAATAGCCACCAGATCCAAAGTAAACGGGCAAAGTGGAAGGATGGAGTTCTTCTGGACAATTTTAAAACCGAATGATGCAATCAACTTCGAGAGTAATGGAAATTTCATTGCTCCAGAATATGCATACAAAATTGTCAAGAAAGGGGACTCAGCAATTATGAAAAGTGAATTGGAATATGGTAACTGCAATACCAAGTGTCAAACTCCAATGGGGGCGATAAACTCTAGTATGCCATTCCACAACATACACCCTCTCACCATCGGGGAATGCCCCAAATATGTGAAATCAAACAGATTAGTCCTTGCGACTGGGCTCAGAAATAGCCCTCAAAGAGAGAGAAGAAGAAAAAAGAGAGGACTATTTGGAGCTATAGCAGGTTTTATAGAGGGAGGATGGCAGGGAATGGTAGATGGTTGGTATGGATACCACCATAGCAATGAGCAGGGGAGTGGATACGCTGCAGACAAAGAATCCACTCAAAAGGCAATAGATGGAGTCACCAATAAGGTCAACTCGATCATTGACAAAATGAACACTCAGTTTGAGGCCGTTGGAAGGGAATTTAATAACTTAGAAAGGAGAATAGAGAATTTAAACAAGAAGATGGAAGACGGATTCCTAGATGTCTGGACTTATAATGCTGAACTTCTGGTTCTCATGGAAAATGAGAGAACTCTAGACTTTCATGACTCAAATGTCAAGAACCTTTACGACAAGGTCCGACTACAGCTTAGGGATAATGCAAAAGAGCTGGGTAACGGTTGTTTCGAGTTCTATCACAAATGTGATAATGAATGTATGGAAAGTGTAAGAAACGGAACGTATGACTACCCGCAGTATTCAGAAGAAGCAAGACTAAAAAGAGAGGAAATAAGTGGAGTAAAATTGGAATCAATAGGAACTTACCAAATACTGTCAATTTATTCAACAGTGGCGAGTTCCCTAGCGCTGGCAATCATGGTAGCTGGTCTATCTTTATGGATGTGCTCC------------------------ - 'CK_HK_WF157_2003' ATGGAGAAAATAGTGCTTCTTCTTGCAATAGTCAGTCTTGTTAAAAGTGATCAGATTTGCATTGGTTACCATGCAAACAACTCGACAGAGCAGGTTGACACAATAATGGAAAAGAACGTTACTGTTACACATGCCCAAGACATACTGGAAAAGACCCACAACGGGAAGCTCTGCGACCTAGATGGAGTGAAGCCTCTAATTTTGAGAGATTGTAGTGTAGCTGGATGGCTCCTCGGGAACCCAATGTGTGACGAATTCATCAATGTACCGGAATGGTCTTACATAGTGGAGAAGGCCAGTCCATCCAATGACCTCTGTTACCCAGGGGATTTCAACAATTATGAAGAACTGAAACACCTATTGAGCAGAATAAACCATTTTGAGAAAATTCAGATCATCCCCAAAAGCTCTTGGTCCAATCATGAAGCCTCATCAGGGGTGAGCTCAGCATGTCCATACCTGGGAAAGCCCTCCTTTTTCAGAAATGTGGTATGGCTTATCAAAAAGAACAGTACATACCCAACAATAAAGAGGAGCTACAATAATACCAACCAAGAAGATCTTTTGGTACTGTGGGGGATTCACCATCCTAATGATGCGGCAGAGCAGATAAAGCTCTATCAAAACCCAACCACCTATATTTCCGTTGGAACATCAACACTAAACCAGAGATTGGTACCAAAAATAGCTACTAGATCCAAAGTAAACGGGCAAAGTGGAAGGATGGAGTTCTTCTGGACAATTTTAAAACCGAATGATGCAATCAACTTCGAGAGTAATGGAAATTTCATTGCTCCAGAATATGCATACAAAATTGTCAAGAAAGGGGACTCAGCAATTATGAAAAGTGAATTGGAATATGGTAACTGCAACACCAAGTGTCAAACTCCAATGGGGGCGATAAACTCTAGTATGCCCTTCCACAACATACACCCTCTCACCATCGGGGAATGCCCCAAATATGTGAAATCAAACAGACTAGTCCTTGCGACTGGGCTCAGAAATAGCCCTCAAAGAGAGAGAAGAAGAAAAAAGAGAGGACTATTTGGAGCTATAGCGGGTTTTATAGAGGGAGGATGGCAGGGAATGGTAGATGGTTGGTATGGATACCACCATAGCAATGAGCAGGGGAGTGGATACGCTGCAGACAAAGAATCCACTCAAAAGGCAATAGATGGAGTCACCAATAAGGTCAACTCGATCATTGACAAAATGAACACTCAGTTTGAGGCCGTTGGAAGGGAATTTAATAACTTAGAAAGGAGAATAGAGAATTTAAACAAGAAGATGGAAGACGGATTCCTAGATGTCTGGACTTATAATGCTGAACTTCTAGTTCTCATGGAAAATGAGAGAACTCTAGACTTTCATGACTCAAATGTCAAGAACCTTTACGACAAGGTCCGACTACAGCTTAGGGATAATGCAAAAGAGCTGGGTAACGGTTGTTTCGAGTTCTATCACAAATGTGATAATGAATGTATGGAAAGTGTAAGAAACGGAACGTATGACTACTCGCAGTATTCAGAAGAAGCAAGACTAAAAAGAGAGGAAATAAGTGGAGTAAAATTGGAATCAATAGGAACTTACCAAATACTGTCAATTTATTCAACAGTGGCGAGTTCCCTAGCACTGGCAATCATGGTAGCTGGTCTATCTTTATGGATGTGCTCCAATGGTTCGTTACAATGT------ - 'HUMAN_VIETNAM_CL105_2005' ATGGAGAAAATAGTGCTTCTTTTTGCGATAGTCAGTCTTGTTAAAAGTGATCAGATTTGCATTGGTTACCATGCAAACAACTCGACAGAGCAGGTTGACACAATAATGGAAAAGAACGTTACTGTTACACATGCCCAAGACATACTGGAAAAGACACACAACGGGAAGCTCTGCGATCTAGATGGAGTGAAGCCTCTAATTTTGAGAGATTGTAGTGTAGCTGGATGGCTACTCGGAAACCCAATGTGTGACGAATTCATCAATGTGCCGGAATGGTCTTACATAGTGGAGAAGGTCAATCCAGTCAATGACCTCTGTTACCCAGGGGTTTTCAATGACTATGAAGAATTGAAACACCTATTGAGCAGAATAAACCATTTTGAGAAAATTCAGATCATCCCCAAAAGTTCTTGGTCCAGTCATGAAGCCTCATTAGGGGTGAGCTCAGTATGTCCATACCAGGGAAAGTCCTCCTTTTTCAGAAATGTGGTATGGCTTATCAAAAAGAACAGTACATACCCAACAATAAAGAGGAGCTACAATAATACCAACCAAGAAGATCTTTTGGTAATATGGGGGATTCATCATCCTAATGATGCGGCAGAGCAGATAAAGCTCTATCAAAACCCAACCACCTATATTTCCGTTGGGACATCAACACTAAACCAGAGATTGGTACCAAGAATAGCTACTAGATCCAAAGTAAACGGGCAAAGTGGGAGGATGGAGTTCTTCTGGACAATTTTAAAACCGAATGATGCAATCAACTTCGAGAGTAATGGAAATTTCATTGCTCCAGAATATGCATACAAGATTGTCAAGAAAGGGGACTCAACAATTATGAAAAGTGAATTGGAATATGGTAACTGCAACACCAAGTGTCAAACTCCAATGGGGGCGATAAACTCTAGTATGCCATTCCACAATATACACCCTCTCACCATCGGGGAATGCCCCAAATATGTGAAATCAAACAGATTAGTCCTTGCGACTGGGCTCAGAAATAGCCCTCAAAAAGAGAGAAGAAGAAAAAAGAGAGGATTATTTGGAGCTATAGCAGGTTTTATAGAGGGAGGATGGCAGGGAATGGTAGATGGTTGGTATGGGTACCACCATAGCAATGAGCAGGGGAGTGGGTACGCTGCAGACAAAGAATCCACTCAAAAGGCAATAGATGGAGTCACCAATAAGGTCAACTCGATCATTGACAAAATGAACACTCAGTTTGAGGCCGTTGGAAGGGAATTTAACAACTTAGAAAGGAGAATAGAGAATTTAAACAAGAAGATGGAAGACGGGTTCCTAGATGTCTGGACTTATAATGCTGAACTTCTGGTTCTCATGGAAAATGAGAGAACTCTAGACTTTCATGACTCAAATGTCAAGAACCTTTACGACAAGGTCCGACTACAGCTTAGGGATAATGCAAAGGAGCTGGGTAACGGTTGTTTCGAGTTCTATCATAAATGTGATAATGAATGTATGGAAAGTGTAAGAAACGGAACGTATGACTACCCGCAGTATTCAGAAGAAGCAAGATTAAAAAGAGAGGAAATAAGTGGAGTAAAATTGGAATCAATAGGAATTTACCAAATACTGTCAATTTATTCTACAGTGGCGAGTTCCCTAGCACTGGCAATCATGATAGCTGGTCTATCCTTATGGATGTGCTCCAATGGGTCGTTACAA--------- - 'DUCK_VIETNAM_376_2005' ATGGAGAAAATAGTGCTTCTTTTTGCGATAGTCAGTCTTGTTAAAAGTGATCAGATTTGCATTGGTTACCATGCAAACAACTCAACAGAGCAGGTTGACACAATAATGGAAAAGAACGTTACTGTTACACATGCCCAAGACATACTGGAAAAGACACACAACGGGAAGCTCTGCGATCTAGATGGAGTGAAGCCTCTAATTTTGAGAGATTGTAGTGTAGCTGGATGGCTCCTCGGAAACCCAATGTGTGACGAATTCATCAATGTGCCGGAATGGTCTTACATAGTGGAGAAGGCCAATCCAGTCAATGACCTCTGTTACCCAGGGGATTTCAATGACTATGAAGAATTGAAACACCTATTGAGCAGAATAAACCATTTTGAGAAAATTCAGATCATCCCCAAAAGTTCTTGGTCCAGTCATGAAGCCTCATTAGGAGTGAGCTCAGCATGTCCATACCAGGGAAATCCCTCCTTTTTCAGAAATGTGGTATGGCTTATCAAAAAGAACAGTACATACCCAACAATAAAGAGGAACTACAATAATACCAACCAAGAAGATCTTTTGGTAATGTGGGGGATTCACCATCCTAATGATGCGGCAGAGCAGACAAAGCTCTATCAAAACCCAACCACCTATATTTCCGTTGGGACATCAACACTAAACCAGAGATTGGTACCAAGAATAGCTACTAGATCCAAAATAAACGGGCAAAGTGGGAGGATAGAGTTCTTCTGGACAATTTTAAAACCGAATGATGCAATCAACTTCGAGAGTAATGGAAATTTCATTGCTCCAGAATATGCATACAAAATTGTCAAGAAAGGGGACTCAACAATTATGAAAAGTGAATTGGAATATGGTAACTGCAACACCAAGTGTCAAACTCCAATGGGGGCGATAAACTCTAGTATGCCATTCCACAATATACATCCTCTCACCATCGGGGAGTGCCCCAAATATGTGAAATCAAACAGATTAGTCCTTGCGACTGGGCTCAGAAATAGCCCTCAAAGAGAGAGAAGAAGAAAAAAGAGAGGATTATTTGGAGCTATAGCAGGTTTTATAGAAGGAGGATGGCAAGGAATGGTAGATGGTTGGTATGGGTACCACCATAGCAATGAGCAGGGAAGTGGGTACGCTGCAGACAAAGAATCCACTCAAAAGGCAATAGATGGAGTCACCAATAAGGTCAACTCGATCATTGACAAAATGAACACTCAGTTTGAGGCCGTTGGAAGGGAATTTAACAACTTAGAAAGGAGAATAGAGAATTTAAACAAGAAGATGGAAGACGGGTTCCTAGATGTCTGGACTTATAATGCTGAACTTCTGGTTCTCATGGAAAATGAGAGAACTCTAGACTTTCATGACTCAAATGTCAAGAACCTTTACGACAAGGTCCGACTACAGCTTAGAGATAATGCAAAGGAGCTGGGTAACGGTTGTTTCGAGTTCTATCATAAATGTGATAATGAATGTATGGAAAGTGTAAGAAACGGAACGTATGACTACCCGCAGTATTCAGAAGAAGCAAGATTAAAAAGAGAGGAAATAAGTGGAGTAAAATTGGAATCAATAGGAATTTACCAAATACTGTCAATTTATTCTACTGTGGCGAGTTCCCTAGCACTGGCAATCATGGTAGCTGGTCTATCCTTATGGATGTGCTCCAATGGGTCGTTACAATGCAGA--- - 'VIETNAM_3062_2004' ATGGAGAAAATAGTGCTTCTTTTTGCAATAGTCAGTCTTGTTAAAAGTGATCAGATTTGCATTGGTTACCATGCAAACAACTCGACAGAGCAGGTTGACACAATAATGGAAAAGAACGTTACTGTTACACATGCCCAAGACATACTGGAAAAGACACACAACGGGAAGCTCTGCGATCTAGATGGAGTGAAGCCTCTAATTTTGAGAGATTGTAGTGTAGCTGGATGGCTCCTCGGAAACCCAATGTGTGACGAATTCATCAATGTGCCGGAATGGTCTTACATAGTGGAGAAGGCCAATCCAGTCAATGACCTCTGTTACCCAGGGGATTTCAATGACTATGAAGAATTGAAACACCTATTGAGCAGAATAAACCATTTTGAGAAAATTCAGATCATCCCCAAAAGTTCTTGGTCCAGTCATGAAGCCTCATTAGGAGTGAGCTCAGCATGTCCATACCAGGGAAAGTCCTCCTTTTTCAGAAATGTGGTATGGCTTATCAAAAAGAACAGTACATACCCAACAATAAAGAGGAGCTACAATAATACCAACCAAGAAGATCTTTTGGTACTGTGGGGGATTCACCATCCTAATGATGCGGCAGAGCAGACAAAGCTCTATCAAAACCCAACCACCTATATTTCCGTTGGGACATCAACACTAAACCAGAGGTTGGTACCAAGAATAGCTACTAGATCCAAAGTAAACGGGCAAAGTGGAAGGATGGAGTTCTTCTGGACAATTTTAAAACCGAATGATGCAATCAACTTCGAGAGTAATGGAAATTTCATTGCTCCAGAATATGCATACAAAATTGTCAAGAAAGGGGACTCAACAATTATGAAAAGTGAATTGGAATATGGTAACTGCAACACCAAGTGTCAAACTCCAATGGGGGCGATAAACTCTAGTATGCCATTCCACAATATACACCCTCTCACCATCGGGGAATGCCCCAAATATGTGAAATCAAACAGATTAGTCCTTGCGACTGGGCTCAGAAATAGCCCTCAAAGAGAGAGAAGAAGAAAAAAGAGAGGATTATTTGGAGCTATAGCAGGTTTTATAGAGGGAGGATGGCAGGGAATGGTAGATGGTTGGTATGGGTACCACCATAGCAATGAGCAGGGGAGTGGGTACGCTGCAGACAAAGAATCCACTCAAAAGGCAATAGATGGAGTCACCAATAAGGTCAACTCGATCATTGACAAAATGAACACTCAATTTGAGGCCGTTGGAAGGGAATTTAACAACTTAGAAAGGAGAATAGAGAATTTAAACAAGAAGATGGAAGACGGGTTCCTAGATGTCTGGACTTATAATGCTGAACTTCTGGTTCTCATGGAAAATGAGAGAACTCTAGACTTTCATGACTCAAATGTCAAGAACCTTTACGACAAGGTCCGACTACAGCTTAGGGATAATGCAAAGGAGCTGGGTAACGGTTGTTTCGAGTTCTATCATAAATGTGATAATGAATGTATGGAAAGTGTAAGAAACGGAACGTATGACTACCCGCAGTATTCAGAAGAAGCAAGACTAAAAAGAGAGGAAATAAGTGGAGTAAAATTGGAATCAATAGGAATTTACCAAATACTGTCAATTTATTCTACAGTGGCGAGTTCCCTAGCACTGGCAATCATGGTAGCTGGTCTATCCTTATGGATGTGCTCCAATGGGTCG--------------- - 'MALLARD_VIETNAM_16_2003' ATGGAGAAAATAGTGCTTCTTTTTGCAATAGTCAGTCTTGTTAAAAGTGATCAGATTTGCATTGGTTACCATGCAAACAACTCGACAGAGCAGGTTGACACAATAATGGAAAAGAACGTTACTGTTACACATGCCCAAGACATACTGGAAAAGACACACAACGGGAAGCTCTGCGATCTAGATGGAGTGAAGCCTCTAATTTTGAGAGATTGTAGTGTAGCTGGATGGCTCCTCGGAAACCCAATGTGTGACGAATTCATCAATGTGCCGGAATGGTCTTACATAGTGGAGAAGGCCAATCCAGTCAATGACCTCTGTTACCCAGGGGATTTCAATGAATATGAAGAATTGAAACACCTATTGAGCAGAATAAACCATTTTGAGAAAATTCAGATCATCCCCAAAAGTTCTTGGTCCAGTCATGAAGCCTCATTAGGGGTGAGCTCAGCATGTCCATACCAGGGAAAGTCCTCCTTTTTCAGAAATGTGGTATGGCTTGTCAAAAAGAACAGTACATACCCAACAATAAAGAGGAGCTACAATAATACCAACCAAGAAGATCTTTTGGTACTGTGGGGGATTCACCATCCTAATGATGCGGCAGAGCAGACAAAGCTCTATCAAAATCCAACCACCTACATTTCCGTTGGGACATCAACACTAAACCAGAGATTGGTACCAAGAATAGCTACTAGATCCAAAGTAAACGGGCAAAGTGGAAGGATGGAGTTCTTCTGGACAATTTTAAAACCGAATGATGCAATCAACTTCGAGAGTAATGGAAATTTCATTGCTCCAGAATATGCATACAAAATTGTCAAGAAAGGGGACTCAACAATTATGAAAAGTGAATTGGAATATGGTAACTGCAACACCAAGTGTCAAACTCCAATGGGGGCGATAAACTCTAGTATGCCATTCCACAATATACACCCCCTCACCATCGGGGAATGCCCCAAATATGTGAAATCAAACAGATTAGTCCTTGCGACTGGGCTCAGAAATAGCCCTCAAAGAGAGAGAAGAAGAAAAAAGAGAGGATTATTTGGAGCTATAGCAGGTTTTATAGAGGGAGGATGGCAAGGAATGGTAGATGGTTGGTATGGGTACCACCATAGCAATGAGCAGGGGAGTGGGTACGCTGCAGACAAAGAATCCACTCAAAAGGCAATAGATGGAGTCACCAATAAGGTCAACTCGATCATTGACAAAATGAACACTCAGTTTGAGGCCGTTGGAAGGGAATTTAACAACTTAGAAAGGAGAATAGAGAATTTAAACAAGAAGATGGAAGACGGGTTCCTAGATGTCTGGACTTATAATGCTGAACTTCTGGTTCTCATGGAAAATGAGAGAACTCTAGACTTTCATGACTCAAATGTCAAGAACCTTTACGACAAGGTCCGACTACAGCTTAGGGATAATGCAAAGGAGCTGGGTAACGGTTGTTTCGAGTTCTATCATAAATGTGATAATGAATGTATGGAAAGTGTAAGAAACGGAACGTATGACTACCCGCAGTATTCAGAAGAAGCAAGACTAAAAAGAGAGGAAATAAGTGGAGTAAAATTGGAATCAATAGGAATTTACCAAATACTGTCAATTTATTCTACAGTGGCGAGTTCCCTAGCACTGGCAATCATGGTAGCTGGTCTATCCTTATGGATGTGCTCCAATGGGTCGTTACAATGCAGA--- - 'CHICKEN_THAILAND_KANCHANABURI_CK_160_2005' ATGGAGAAAATAGTGCTTCTTTTTGCAATAGTCAGTCTTGTTAAAAGTGATCAGATTTGCATTGGTTACCATGCAAACAACTCAACAGAGCAGGTTGACACAATAATGGAAAAGAACGTTACTGTTACACATGCCCAAGACATACTGGAAAAGACACACAACGGGAAGCTCTGTGATCTAGATGGAGTGAAGCCTCTAATTTTGAGAGATTGTAGTGTAGCTGGATGGCTCCTTGGAAACCCAATGTGTGATGAATTCATCAATGTGCCGGAATGGTCTTACATAGTGGAGAAGGCCAATCCAGCCAATGACCTCTGTTACCCAGGGGATTTCAATGACTATGAAGAATTGAAACACCTATTGAGCAGAATAAACCATTTTGAGAAAATTCAGATCATCCCCAAAAGTTCTTGGTCCAGTCATGAAGCCTCATTAGGAGTGAGCTCAGCATGTCCATATCAGGGAAAGTCCTCCTTTTTCAGAAATGTGGTATGGCTTATCAAAAAGAACAGTACATACCCAACAATAAAGAGGAGCTACAATAATACCAACCAAGAAGATCTTTTGGTACTGTGGGGGATTCACCATCCTAATGATGCGGCAGAGCAGACAAAGCTCTATCAAAACCCAACCACCTACATTTCCGTTGGGACATCAACACTAAACCAGAGATTGGTACCAAGAATAGCTACTAGATCCAAAGTAAACGGGCAAAGTGGAAGGATGGAGTTCTTCTGGACAATTTTAAAACCGAATGATGCAATCAACTTCGAGAGTAATGGAAATTTCATTGCTCCAGAATATGCATACAAAATTGTCAAGAAAGGGGACTCAACAATTATGAAAAGTGAATTGGAATATGGTAACTGCAACACCAAGTGTCAAACTCCAATGGGGGCGATAAACTCTAGTATGCCATTCCACAATATACACCCTCTCACCATCGGGGAATGCCCCAAATATGTGAAATCAAACAGATTAGTCCTTGCGACTGGACTCAGAAATAGCCCTCAAAGAGAGAAAAGAAGAAAAAAGAGAGGATTATTTGGAGCTATAGCAGGTTTTATAGAGGGAGGATGGCAGGGAATGGTAGATGGTTGGTATGGGTACCACCATAGCAATGAGCAGGGGAGTGGGTACGCTGCAGACAAAGAATCCACTCAAAAGGCAATAGATGGAGTCACCAATAAGGTCAACTCGATCATTGACAAAATGAACACTCAGTTTGAGGCCGTTGGAAGGGAATTTAACAACTTAGAAAGGAGAATAGAGAATTTAAACAAGAAGATGGAAGACGGGTTCCTAGATGTCTGGACTTATAATGCTGAACTTCTGGTTCTCATGGAAAATGAGAGAACTCTAGACTTTCATGACTCAAATGTCAAGAACCTTTACGACAAGGTCCGACTACAGCTTAGGGATAATGCAAAGGAGCTGGGTAACGGTTGTTTCGAGTTCTATCATAAATGTGATAATGAATGTATGGAAAGTGTAAGGAACGGAACGTATGACTACCCGCAGTATTCAGAAGAAGCAAGACTAAAAAGAGAGGAAATAAGTGGAGTAAAATTGGAATCAATAGGAATTTACCAAATACTGTCAATTTATTCTACAGTAGCGAGTTCCCTAGCACTGGCAATCATGGTAGCTGGTCTATCCTTATGGATGTGCTTCAATGGGTCGTTACAATGCAGAATT - 'DUCK_VIETNAM_272_2005' ATGGAGAAAATAGTGCTTCTTTTTGCAATAGTCAGTCTTGTTAAAAGTGATCAGATTTGCATTGGTTACCATGCAAACAACTCGACAGAGCAGGTTGACACAATAATGGAAAAGAACGTTACTGTTACACATGCCCAAGACATACTGGAAAAGACACACAACGGGAAGCTCTGCGATCTAGATGGAGTGAAGCCTCTAATTTTGAGAGATTGTAGTGTAGCTGGATGGCTCCTTGGAAATCCAATGTGTGACGAATTCATCAATGTGCCGGAATGGTCTTACATAGTGGAGAAGGCCAATCCAGTCAATGACCTCTGTTACCCAGGGGATTTCAATGACTATGAAGAATTGAAACACCTATTGAGCAGAATAAACCATTTTGAGAAAATTCAGATCATCCCCAAAAGTTCTTGGCCCAGTCATGAAGCCTCATTAGGGGTGAGCTCAGCATGTCCATACCAGGGAAGGTCCTCCTTTTTCAGAAATGTGGTATGGCTTATCAAAAAGAACAGTACATATCCAACAATAAAGAGGAGCTACAATAATACCAACCAAGAAGATCTTTTGGTACTGTGGGGGATTCACCATCCTAATGATGCGGCAGAGCAGACAAAGCTCTATCAAAACCCAACCACCTATATTTCCGTTGGGACATCAACACTAAACCAGAGATTGATACCAAGAATAGCTACTAGATCCAAAGTAAACGGGCAAAGTGGAAGGATGGAGTTCTTCTGGACAATTTTAAAACCGAATGATGCAATCAATTTCGAGAGTAATGGAAATTTCATTGCCCCAGAATACGCATACAAAATTGTCAAGAAAGGGGACTCAACAATTATGAAAAGTGAATTGGAATATGGTAACTGCAACACCAAGTGTCAAACACCAATGGGGGCGATAAATTCTAGTATGCCATTCCACAATATACACCCTCTCACCATCGGGGAATGCCCCAAATATGTGAAATCAAACAGATTAGTCCTTGCGACTGGGCTCAGAAATAGCCCTCAAAGAGAGAGAAGA---AAAAAGAGAGGATTATTTGGAGCTATAGCAGGTTTTATAGAGGGGGGATGGCAGGGAATGGTAGATGGTTGGTATGGGTACCACCATAGCAATGAACAGGGGAGTGGGTACGCTGCAGACAAAGAATCCACTCAAAAGGCAATAGATGGAGTCACCAATAAGGTCAACTCGATCATTGACAAAATGAACACTCAGTTTGAGGCCGTTGGAAGGGAATTTAACAACTTAGAAAGGAGAATAGAGAATTTAAACAAGAAGATGGAAGACGGGTTCCTAGATGTCTGGACTTATAATGCTGAACTTCTGGTTCTCATGGAAAATGAGAGAACTCTAGACTTTCATGACTCAAATGTCAAGAACCTTTACGACAAGGTCCGACTACAGCTTAGGGATAATGCAAAGGAGCTGGGTAACGGTTGTTTCGAGTTCTATCATAAATGTGATAATGAATGTATGGAAAGTGTAAGAAATGGAACGTATGACTACCCGCAGTATTCAGAAGAAGCAAAACTAAAAAGAGAGGAAATAAGTGGAGTAAAATTGGAATCAATAGGAATTTACCAAATACTGTCAATTTATTCCACAGTAGCGAGTTCCCTAGCACTGGCAATCATGGTAGCTGGTCTATCCTTATGGATGTGCTCCAATGGGTCGTTACAATGCAGA---; -END; - -BEGIN ASSUMPTIONS; - CHARSET span_1 = 1-697; - CHARSET span_2 = 698-1167; - CHARSET span_3 = 1168-1698; -END; -BEGIN TREES; - TREE tree_1 = ((((((((TREESPARROW_HENAN_1_2004:0.0145769244137292,TREESPARROW_HENAN_2_2004:1e-10)Node7:0.005925131124384257,CHICKEN_HEBEI_326_2005:0.03148335967389677)Node6:0.006520820816328921,((DUCK_GUANGZHOU_20_2005:0.009483822383439561,(GOOSE_SHANTOU_2216_2005:0.007374093130581441,PEREGRINEFALCON_HK_D0028_2004:0.007242107381463219)Node14:0.0007056004954733679)Node12:0.00710363602212726,CK_HK_WF157_2003:0.00757594740908166)Node11:0.004227199989057285)Node5:0.001170889307235767,TREESPARROW_HENAN_3_2004:0.008919169512223372)Node4:0.0008380584919822353,(TREESPARROW_HENAN_4_2004:0.006708184198226799,((CHICKEN_HONGKONG_915_97:1e-10,(HONGKONG_97_98:0.006483231977175029,HONGKONG_538_97:1e-10)Node24:0.0003031375872603963)Node22:0.0001037022453470389,(GOOSE_HONGKONG_W355_97:1e-10,DUCK_HONGKONG_Y283_97:1e-10)Node27:0.002891685438446985)Node21:0.02744187404194088)Node19:0.002944759819938243)Node3:0.001672904530995233,SWINE_ANHUI_2004:0.01260983958335299)Node2:0.01303612329048956,DUCK_VIETNAM_272_2005:0.008088746451854261)Node1:0.0006545914783555439,((HUMAN_VIETNAM_CL105_2005:0.01105269263722943,DUCK_VIETNAM_376_2005:0.006417734235732284)Node33:0.002021990910251294,VIETNAM_3062_2004:0.002304874937323682)Node32:0.0006817702832121299,(MALLARD_VIETNAM_16_2003:0.005709114871229771,CHICKEN_THAILAND_KANCHANABURI_CK_160_2005:0.008864540916547606)Node37:9.336374870077841e-05); - TREE tree_2 = ((((((TREESPARROW_HENAN_1_2004:0.002586740118529802,TREESPARROW_HENAN_3_2004:0.003828953390398881)Node5:0.00187457851284572,TREESPARROW_HENAN_4_2004:0.0002656521581222459)Node4:0.008299727091877812,((CHICKEN_HEBEI_326_2005:0.01484958179784225,(SWINE_ANHUI_2004:1e-10,TREESPARROW_HENAN_2_2004:0.002239639293515125)Node12:0.01361271232984685)Node10:0.01278549184522065,((CHICKEN_HONGKONG_915_97:1e-10,GOOSE_HONGKONG_W355_97:1e-10)Node16:0.001326679361120118,((DUCK_HONGKONG_Y283_97:0.0006676977779578139,HONGKONG_538_97:1e-10)Node20:0.0006271503105586317,HONGKONG_97_98:0.004109899012531796)Node19:0.001653355437332724)Node15:0.01224714418221361)Node9:0.003429034672045344)Node3:0.005031763140085913,(((DUCK_GUANGZHOU_20_2005:0.004262245747717084,GOOSE_SHANTOU_2216_2005:0.004308213533754201)Node26:0.002157320455556664,CK_HK_WF157_2003:0.00647028357035998)Node25:4.000752717957338e-05,PEREGRINEFALCON_HK_D0028_2004:0.002090471815463569)Node24:0.003260422306103818)Node2:0.00707214212698231,DUCK_VIETNAM_272_2005:0.01454290899825338)Node1:0.0007147389821184919,(((HUMAN_VIETNAM_CL105_2005:0.004710041013757377,DUCK_VIETNAM_376_2005:0.01496207542884359)Node34:0.001166828623060772,MALLARD_VIETNAM_16_2003:0.003061545152147631)Node33:0.001134022328667363,VIETNAM_3062_2004:1e-10)Node32:0.0002767006572468676,CHICKEN_THAILAND_KANCHANABURI_CK_160_2005:0.00405819047265216); - TREE tree_3 = (TREESPARROW_HENAN_1_2004:1.793736422068138e-05,((TREESPARROW_HENAN_3_2004:0.005512611253559831,TREESPARROW_HENAN_4_2004:0.000171467489882283)Node3:0.001655366533442949,(CHICKEN_HEBEI_326_2005:0.005483900345571787,(SWINE_ANHUI_2004:0.006320038544899231,(((CHICKEN_HONGKONG_915_97:1e-10,HONGKONG_97_98:1e-10)Node12:0.001309621960005619,(GOOSE_HONGKONG_W355_97:1e-10,HONGKONG_538_97:1e-10)Node15:0.0005799496924062597)Node11:0.01406566295495963,((DUCK_HONGKONG_Y283_97:999.9836725287659,(((HUMAN_VIETNAM_CL105_2005:0.002027831968935447,DUCK_VIETNAM_376_2005:0.003754856650868615)Node23:0.00177604858958343,(VIETNAM_3062_2004:0.002068037509299944,MALLARD_VIETNAM_16_2003:1e-10)Node26:0.0001623690336813484)Node22:0.0008290773242978894,(CHICKEN_THAILAND_KANCHANABURI_CK_160_2005:0.004523465945045592,DUCK_VIETNAM_272_2005:0.005056282226890766)Node29:0.001128740164377167)Node21:0.01150309854222087)Node19:0.001994389759866116,(((DUCK_GUANGZHOU_20_2005:0.003847909099661096,GOOSE_SHANTOU_2216_2005:0.005686200296849465)Node34:0.006130725555048717,PEREGRINEFALCON_HK_D0028_2004:8.387427766777967e-05)Node33:0.0009906361822363255,CK_HK_WF157_2003:0.005714641337818262)Node32:0.004952071733007253)Node18:0.002028752021615747)Node10:0.004186888950236505)Node8:0.002350770416932014)Node6:0.002154523112988181)Node2:0.0002651492563879275,TREESPARROW_HENAN_2_2004:0.007562549920247083); -END;
--- a/test-data/meme-in1.fa Mon Feb 17 14:52:11 2020 -0500 +++ b/test-data/meme-in1.fa Thu Feb 20 18:10:47 2020 -0500 @@ -1,1 +1,1 @@ ->HUMAN_VIETNAM_CL105_2005 ATGGAGAAAATAGTGCTTCTTTTTGCGATAGTCAGTCTTGTTAAAAGTGA TCAGATTTGCATTGGTTACCATGCAAACAACTCGACAGAGCAGGTTGACA CAATAATGGAAAAGAACGTTACTGTTACACATGCCCAAGACATACTGGAA AAGACACACAACGGGAAGCTCTGCGATCTAGATGGAGTGAAGCCTCTAAT TTTGAGAGATTGTAGTGTAGCTGGATGGCTACTCGGAAACCCAATGTGTG ACGAATTCATCAATGTGCCGGAATGGTCTTACATAGTGGAGAAGGTCAAT CCAGTCAATGACCTCTGTTACCCAGGGGTTTTCAATGACTATGAAGAATT GAAACACCTATTGAGCAGAATAAACCATTTTGAGAAAATTCAGATCATCC CCAAAAGTTCTTGGTCCAGTCATGAAGCCTCATTAGGGGTGAGCTCAGTA TGTCCATACCAGGGAAAGTCCTCCTTTTTCAGAAATGTGGTATGGCTTAT CAAAAAGAACAGTACATACCCAACAATAAAGAGGAGCTACAATAATACCA ACCAAGAAGATCTTTTGGTAATATGGGGGATTCATCATCCTAATGATGCG GCAGAGCAGATAAAGCTCTATCAAAACCCAACCACCTATATTTCCGTTGG GACATCAACACTAAACCAGAGATTGGTACCAAGAATAGCTACTAGATCCA AAGTAAACGGGCAAAGTGGGAGGATGGAGTTCTTCTGGACAATTTTAAAA CCGAATGATGCAATCAACTTCGAGAGTAATGGAAATTTCATTGCTCCAGA ATATGCATACAAGATTGTCAAGAAAGGGGACTCAACAATTATGAAAAGTG AATTGGAATATGGTAACTGCAACACCAAGTGTCAAACTCCAATGGGGGCG ATAAACTCTAGTATGCCATTCCACAATATACACCCTCTCACCATCGGGGA ATGCCCCAAATATGTGAAATCAAACAGATTAGTCCTTGCGACTGGGCTCA GAAATAGCCCTCAAAAAGAGAGAAGAAGAAAAAAGAGAGGATTATTTGGA GCTATAGCAGGTTTTATAGAGGGAGGATGGCAGGGAATGGTAGATGGTTG GTATGGGTACCACCATAGCAATGAGCAGGGGAGTGGGTACGCTGCAGACA AAGAATCCACTCAAAAGGCAATAGATGGAGTCACCAATAAGGTCAACTCG ATCATTGACAAAATGAACACTCAGTTTGAGGCCGTTGGAAGGGAATTTAA CAACTTAGAAAGGAGAATAGAGAATTTAAACAAGAAGATGGAAGACGGGT TCCTAGATGTCTGGACTTATAATGCTGAACTTCTGGTTCTCATGGAAAAT GAGAGAACTCTAGACTTTCATGACTCAAATGTCAAGAACCTTTACGACAA GGTCCGACTACAGCTTAGGGATAATGCAAAGGAGCTGGGTAACGGTTGTT TCGAGTTCTATCATAAATGTGATAATGAATGTATGGAAAGTGTAAGAAAC GGAACGTATGACTACCCGCAGTATTCAGAAGAAGCAAGATTAAAAAGAGA GGAAATAAGTGGAGTAAAATTGGAATCAATAGGAATTTACCAAATACTGT CAATTTATTCTACAGTGGCGAGTTCCCTAGCACTGGCAATCATGATAGCT GGTCTATCCTTATGGATGTGCTCCAATGGGTCGTTACAA--------- >CHICKEN_HEBEI_326_2005 ATGGAGAGAATAGTGCTTCTTCTTGCAATAATCGGTCTTGTTAAAAGTGA TCAGATTTGCATTGGTTACCATGCAAACAACTCGACAGAGCAGGTTGACA CAATAATGGAAAAGAACGTTACTGTTACACATGCTCAAGACATACTGGAG AAGACACACAACGGGAAGCTCTGCAACCCAGATGGAGTGAAGCCTCTAAT TTTGAAAGATTGTAGTGTAGCTGGATGGCTCCTCGGAAACCCAATGTGTG ACGAATTTATCAATGTGCCGGAATGGTCTTACATAGTGGAGAAGGCCAGT CCAGCCAATGGCCTCTGTTACCCAGGGGATTTCAATGACTATGAAGAACT GAAACACCTATTGAGCAGAATAAACCATTTTGAGAAAATTCAGATCATCC CCAAAAGTTCTTGGTCCGATCATGGAGCCTCATCAGGGGTGAGCTCAGCA TGTTCCTATCTGGGGAAGCCCTCCTTTTTCAGAAATGTGGTATGGCTTAT CAAAAAGAATAATACATACCCACCAATAAAGGTGAGCTACAACAATACCA ACCAAGAAGATCTTTTGGTACTGTGGGGGATTCACCATCCCAATGATGAG GCAGAGCAGATAAAGATCTATCAAAACCCAACCACCTATATTTCCGTTGG AACATCAACACTAAACCAGAGATTGGTACCAAAAATAGCTACTAGATCCA AAGTAAACGGGCAAAGTGGAAGAATGGAGTTCTTCTGGACAATTTTAAAG CCGAATGATGCTATCAATTTCGATAGTAATGGAAATTTCATTGCTCCAGA ATATGCATACAAAATTGTCAAGAAAGGGGACTCAGCGATTATGAAAAGTG AATTGGAATATGGCAACTGCAACACCAAGTGTCAAACTCCAATGGGGGCG ATAAATTCTAGTATGCCATTCCACAACATACACCCTCTCACCGTCGGGGA ATGCCCCAAATATGTGAAATCAAACAGATTAGTCCTCGCGACTGGACTCA GAAATGCCCCTCAAAGAGAGGGAGGAAGAAAAAAGAGAGGACTATTTGGA GCCATAGCAGGGTTTATAGAGGGAGGATGGCAGGGAATGGTAGATGGTTG GTATGGGTACCACCATAGCAATGAGCAGGGGAGTGGATACGCTGCAGACA AAGAATCCACTCAAAAGGCAATAGATGGAGTCACCAATAAGGTCAACTCG ATCATTGACAAAATGAACACTCAGTTTGAGGCCGTTGGAAGGGAATTTAA TAACTTAGAAAGGAGAATAGAAAATTTAAACAAGAAGATGGAGGACGGAT TCCTAGATGTCTGGACTTATAACGCTGAACTTCTGGTTCTCATGGAAAAT GAGAGAACTCTAGACTTTCATGACTCAAATGTCAAGAACCTTTACGAAAA GGTCCGACTACAGCTTAGGGATAATGCAAAGGAGCTGGGTAACGGTTGTT TCGAGTTCTATCACAAATGTGATAATGAATGTATGGAAAGTGTAAAAAAC GGAACGTATGACTACCCGCAGTATTCAGAAGAAGCAAGACTAAACAGAGA GGAAATAAGTGGAGTAAAATTGGAATCAATGGGAACTTACCAAATACTGT CAATTTATTCAACAGTGGCGAGTTCCCTAGCATTGGCAATCATGGTAGCT GGTCTATCTTTATGGATGTGCTCCAATGGATCGTTACAATGCAGAATT >CHICKEN_HONGKONG_915_97 ATGGAGAAAATAGTGCTTCTTCTTGCAACAGTCAGTCTTGTTAAAAGTGA TCAGATTTGCATTGGTTACCATGCAAACAACTCGACAGAGCAGGTTGACA CAATAATGGAAAAGAATGTTACTGTTACACATGCCCAAGACATACTGGAA AGGACACACAACGGGAAGCTCTGCGATCTAAATGGAGTGAAACCTCTCAT TTTGAGGGATTGTAGTGTAGCTGGATGGCTCCTCGGAAACCCTATGTGTG ACGAATTCATCAATGTGCCGGAATGGTCTTACATAGTGGAGAAGGCCAGT CCAGCCAATGACCTCTGTTATCCAGGGAATTTCAACGACTATGAAGAACT GAAACACCTATTGAGCAGAATAAACCATTTTGAGAAAATTCAGATCATCC CCAAAAGTTCTTGGTCCAATCATGATGCCTCATCAGGGGTGAGCTCAGCA TGTCCATACCTTGGGAGGTCCTCCTTTTTCAGAAATGTGGTATGGCTTAT CAAAAAGAACAGTGCATACCCAACAATAAAGAGGAGCTACAATAATACCA ACCAAGAAGATCTTTTGGTACTGTGGGGGATTCACCATCCTAATGATGCG GCAGAGCAGACAAAGCTCTATCAAAATCCAACCACCTACATTTCCGTTGG AACATCAACACTGAACCAGAGATTGGTTCCAGAAATAGCTACTAGACCCA AAGTAAACGGGCAAAGTGGAAGAATGGAGTTCTTCTGGACAATTTTAAAG CCGAATGATGCCATCAATTTCGAGAGTAATGGAAATTTCATTGCCCCAGA ATATGCATACAAAATTGTCAAGAAAGGGGACTCAACAATTATGAAAAGTG AATTGGAATATGGTAACTGCAACACCAAGTGTCAAACTCCAATGGGGGCG ATAAACTCTAGTATGCCATTCCACAACATACACCCCCTCACCATCGGGGA ATGCCCCAAATATGTGAAATCAAACAGATTAGTTCTTGCGACTGGACTCA GAAATACCCCTCAAAGGGAGAGAAGAAGAAAAAAGAGAGGACTATTTGGA GCTATAGCAGGTTTTATAGAGGGAGGATGGCAGGGCATGGTAGATGGTTG GTATGGGTACCACCATAGCAATGAGCAGGGGAGTGGATACGCTGCAGACA AAGAATCCACTCAAAAGGCAATAGATGGAGTCACCAATAAGGTCAACTCG ATCATTAACAAAATGAACACTCAGTTTGAGGCCGTTGGAAGGGAATTTAA TAACTTAGAAAGGAGAATAGAGAATTTAAACAAGAAAATGGAAGACGGAT TCCTAGATGTCTGGACTTACAATGCTGAACTTCTGGTTCTCATGGAAAAT GAGAGAACTCTCGACTTTCATGACTCAAATGTCAAGAACCTTTACGACAA GGTCCGACTACAGCTTAGGGATAATGCAAAGGAACTGGGTAATGGTTGTT TCGAATTCTATCACAAATGTGATAATGAATGTATGGAAAGTGTAAAAAAC GGAACGTATGACTACCCGCAGTATTCAGAAGAAGCAAGACTAAACAGAGA GGAAATAAGTGGAGTAAAATTGGAATCAATGGGAACTTACCAAATACTGT CAATTTATTCAACAGTGGCGAGTTCCCTAGCACTGGCAATCATGGTAGCT GGTCTATCTTTATGGATGTGCTCCAATGGATCGTTACAATGCAGAATT >HUMAN_VIETNAM_3062_2004 ATGGAGAAAATAGTGCTTCTTTTTGCAATAGTCAGTCTTGTTAAAAGTGA TCAGATTTGCATTGGTTACCATGCAAACAACTCGACAGAGCAGGTTGACA CAATAATGGAAAAGAACGTTACTGTTACACATGCCCAAGACATACTGGAA AAGACACACAACGGGAAGCTCTGCGATCTAGATGGAGTGAAGCCTCTAAT TTTGAGAGATTGTAGTGTAGCTGGATGGCTCCTCGGAAACCCAATGTGTG ACGAATTCATCAATGTGCCGGAATGGTCTTACATAGTGGAGAAGGCCAAT CCAGTCAATGACCTCTGTTACCCAGGGGATTTCAATGACTATGAAGAATT GAAACACCTATTGAGCAGAATAAACCATTTTGAGAAAATTCAGATCATCC CCAAAAGTTCTTGGTCCAGTCATGAAGCCTCATTAGGAGTGAGCTCAGCA TGTCCATACCAGGGAAAGTCCTCCTTTTTCAGAAATGTGGTATGGCTTAT CAAAAAGAACAGTACATACCCAACAATAAAGAGGAGCTACAATAATACCA ACCAAGAAGATCTTTTGGTACTGTGGGGGATTCACCATCCTAATGATGCG GCAGAGCAGACAAAGCTCTATCAAAACCCAACCACCTATATTTCCGTTGG GACATCAACACTAAACCAGAGGTTGGTACCAAGAATAGCTACTAGATCCA AAGTAAACGGGCAAAGTGGAAGGATGGAGTTCTTCTGGACAATTTTAAAA CCGAATGATGCAATCAACTTCGAGAGTAATGGAAATTTCATTGCTCCAGA ATATGCATACAAAATTGTCAAGAAAGGGGACTCAACAATTATGAAAAGTG AATTGGAATATGGTAACTGCAACACCAAGTGTCAAACTCCAATGGGGGCG ATAAACTCTAGTATGCCATTCCACAATATACACCCTCTCACCATCGGGGA ATGCCCCAAATATGTGAAATCAAACAGATTAGTCCTTGCGACTGGGCTCA GAAATAGCCCTCAAAGAGAGAGAAGAAGAAAAAAGAGAGGATTATTTGGA GCTATAGCAGGTTTTATAGAGGGAGGATGGCAGGGAATGGTAGATGGTTG GTATGGGTACCACCATAGCAATGAGCAGGGGAGTGGGTACGCTGCAGACA AAGAATCCACTCAAAAGGCAATAGATGGAGTCACCAATAAGGTCAACTCG ATCATTGACAAAATGAACACTCAATTTGAGGCCGTTGGAAGGGAATTTAA CAACTTAGAAAGGAGAATAGAGAATTTAAACAAGAAGATGGAAGACGGGT TCCTAGATGTCTGGACTTATAATGCTGAACTTCTGGTTCTCATGGAAAAT GAGAGAACTCTAGACTTTCATGACTCAAATGTCAAGAACCTTTACGACAA GGTCCGACTACAGCTTAGGGATAATGCAAAGGAGCTGGGTAACGGTTGTT TCGAGTTCTATCATAAATGTGATAATGAATGTATGGAAAGTGTAAGAAAC GGAACGTATGACTACCCGCAGTATTCAGAAGAAGCAAGACTAAAAAGAGA GGAAATAAGTGGAGTAAAATTGGAATCAATAGGAATTTACCAAATACTGT CAATTTATTCTACAGTGGCGAGTTCCCTAGCACTGGCAATCATGGTAGCT GGTCTATCCTTATGGATGTGCTCCAATGGGTCG--------------- >GOOSE_HONGKONG_W355_97 ATGGAGAAAATAGTGCTTCTTCTTGCAACAGTCAGTCTTGTTAAAAGTGA TCAGATTTGCATTGGTTACCATGCAAACAACTCGACAGAGCAGGTTGACA CAATAATGGAAAAGAATGTTACTGTTACACATGCCCAAGACATACTGGAA AGGACACACAACGGGAAGCTCTGCGATCTAAATGGAGTGAAACCTCTCAT TTTGAGGGATTGTAGTGTAGCTGGATGGCTCCTCGGAAACCCTATGTGTG ACGAATTCATCAATGTGCCGGAATGGTCTTACATAGTGGAGAAGGCCAGT CCAGCCAATGACCTCTGTTATCCAGGGAATTTCAACGACTATGAAGAACT GAAACACCTATTGAGCAGAATAAACCATTTTGAGAAAATTCAGATCATCC CCAAAAGTTCTTGGTCCAATCATGATGCCTCATCAGGGGTTAGCTCAGCA TGTCCATACCTTGGGAGGTCCTCCTTTTTCAGAAATGTGGTATGGCTTAT CAAAAAGAACAGTGCATACCCAACAATAAAGAGGAGCTACAATAATACCA ACCAAGAAGATCTTTTGGTACTGTGGGGGATTCACCATCCTAATGATGCG GCAGAGCAGACAAAGCTTTATCAAAATCCAACCACCTACATTTCCGTTGG AACATCAACACTGAACCAGAGATTGGTTCCAGAAATAGCTACTAGACCCA AAGTAAACGGGCAAAGTGGAAGAATGGAGTTCTTCTGGACAATTTTAAAG CCGAATGATGCCATCAATTTCGAGAGTAATGGAAATTTCATTGCCCCAGA ATATGCATACAAAATTGTCAAGAAAGGGGACTCAACAATTATGAAAAGTG AATTGGAATATGGTAACTGCAACACCAAGTGTCAAACTCCAATGGGGGCG ATAAACTCTAGTATGCCATTCCACAACATACACCCCCTCACCATCGGGGA ATGCCCCAAATATGTGAAATCAAACAGATTAGTTCTTGCGACTGGACTCA GAAATACCCCTCAAAGGGAGAGAAGAAGAAAAAAGAGAGGACTATTTGGA GCTATAGCAGGTTTTATAGAGGGAGGATGGCAGGGCATGGTAGATGGTTG GTATGGGTACCACCATAGCAATGAGCAGGGGAGTGGATACGCTGCAGACA AAGAATCCACTCAAAAGGCAATAGATGGAGTCACCAATAAGGTCAACTCG ATCATTAACAAAATGAACACTCAGTTTGAGGCCGTTGGAAGGGAATTTAA TAACTTAGAAAGGAGAATAGAGAATTTAAACAAGAAAATGGAAGACGGAT TCCTAGATGTCTGGACTTACAATGCTGAACTTCTGGTTCTCATGGAAAAT GAGAGAACTCTCGACTTTCATGACTCAAATGTCAAGAACCTTTACGACAA GGTCCGACTACAGCTTAGGGATAATGCAAAGGAACTGGGTAATGGTTGTT TCGAATTCTATCACAAATGTGATAATGAATGTATGGAAAGTGTAAGAAAC GGAACGTATGACTACCCGCAGTATTCAGAAGAAGCAAGACTAAACAGAGA GGAAATAAGTGGAGTAAAATTGGAATCAATGGGAACTTACCAAATACTGT CAATTTATTCAACAGTGGCGAGTTCCCTAGCACTGGCAATCATGGTAGCT GGTCTATCTTTATGGATGTGCTCCAATGGATCGTTACAATGCAGAATT >MALLARD_VIETNAM_16_2003 ATGGAGAAAATAGTGCTTCTTTTTGCAATAGTCAGTCTTGTTAAAAGTGA TCAGATTTGCATTGGTTACCATGCAAACAACTCGACAGAGCAGGTTGACA CAATAATGGAAAAGAACGTTACTGTTACACATGCCCAAGACATACTGGAA AAGACACACAACGGGAAGCTCTGCGATCTAGATGGAGTGAAGCCTCTAAT TTTGAGAGATTGTAGTGTAGCTGGATGGCTCCTCGGAAACCCAATGTGTG ACGAATTCATCAATGTGCCGGAATGGTCTTACATAGTGGAGAAGGCCAAT CCAGTCAATGACCTCTGTTACCCAGGGGATTTCAATGAATATGAAGAATT GAAACACCTATTGAGCAGAATAAACCATTTTGAGAAAATTCAGATCATCC CCAAAAGTTCTTGGTCCAGTCATGAAGCCTCATTAGGGGTGAGCTCAGCA TGTCCATACCAGGGAAAGTCCTCCTTTTTCAGAAATGTGGTATGGCTTGT CAAAAAGAACAGTACATACCCAACAATAAAGAGGAGCTACAATAATACCA ACCAAGAAGATCTTTTGGTACTGTGGGGGATTCACCATCCTAATGATGCG GCAGAGCAGACAAAGCTCTATCAAAATCCAACCACCTACATTTCCGTTGG GACATCAACACTAAACCAGAGATTGGTACCAAGAATAGCTACTAGATCCA AAGTAAACGGGCAAAGTGGAAGGATGGAGTTCTTCTGGACAATTTTAAAA CCGAATGATGCAATCAACTTCGAGAGTAATGGAAATTTCATTGCTCCAGA ATATGCATACAAAATTGTCAAGAAAGGGGACTCAACAATTATGAAAAGTG AATTGGAATATGGTAACTGCAACACCAAGTGTCAAACTCCAATGGGGGCG ATAAACTCTAGTATGCCATTCCACAATATACACCCCCTCACCATCGGGGA ATGCCCCAAATATGTGAAATCAAACAGATTAGTCCTTGCGACTGGGCTCA GAAATAGCCCTCAAAGAGAGAGAAGAAGAAAAAAGAGAGGATTATTTGGA GCTATAGCAGGTTTTATAGAGGGAGGATGGCAAGGAATGGTAGATGGTTG GTATGGGTACCACCATAGCAATGAGCAGGGGAGTGGGTACGCTGCAGACA AAGAATCCACTCAAAAGGCAATAGATGGAGTCACCAATAAGGTCAACTCG ATCATTGACAAAATGAACACTCAGTTTGAGGCCGTTGGAAGGGAATTTAA CAACTTAGAAAGGAGAATAGAGAATTTAAACAAGAAGATGGAAGACGGGT TCCTAGATGTCTGGACTTATAATGCTGAACTTCTGGTTCTCATGGAAAAT GAGAGAACTCTAGACTTTCATGACTCAAATGTCAAGAACCTTTACGACAA GGTCCGACTACAGCTTAGGGATAATGCAAAGGAGCTGGGTAACGGTTGTT TCGAGTTCTATCATAAATGTGATAATGAATGTATGGAAAGTGTAAGAAAC GGAACGTATGACTACCCGCAGTATTCAGAAGAAGCAAGACTAAAAAGAGA GGAAATAAGTGGAGTAAAATTGGAATCAATAGGAATTTACCAAATACTGT CAATTTATTCTACAGTGGCGAGTTCCCTAGCACTGGCAATCATGGTAGCT GGTCTATCCTTATGGATGTGCTCCAATGGGTCGTTACAATGCAGA--- >CHICKEN_CK_160_2005 ATGGAGAAAATAGTGCTTCTTTTTGCAATAGTCAGTCTTGTTAAAAGTGA TCAGATTTGCATTGGTTACCATGCAAACAACTCAACAGAGCAGGTTGACA CAATAATGGAAAAGAACGTTACTGTTACACATGCCCAAGACATACTGGAA AAGACACACAACGGGAAGCTCTGTGATCTAGATGGAGTGAAGCCTCTAAT TTTGAGAGATTGTAGTGTAGCTGGATGGCTCCTTGGAAACCCAATGTGTG ATGAATTCATCAATGTGCCGGAATGGTCTTACATAGTGGAGAAGGCCAAT CCAGCCAATGACCTCTGTTACCCAGGGGATTTCAATGACTATGAAGAATT GAAACACCTATTGAGCAGAATAAACCATTTTGAGAAAATTCAGATCATCC CCAAAAGTTCTTGGTCCAGTCATGAAGCCTCATTAGGAGTGAGCTCAGCA TGTCCATATCAGGGAAAGTCCTCCTTTTTCAGAAATGTGGTATGGCTTAT CAAAAAGAACAGTACATACCCAACAATAAAGAGGAGCTACAATAATACCA ACCAAGAAGATCTTTTGGTACTGTGGGGGATTCACCATCCTAATGATGCG GCAGAGCAGACAAAGCTCTATCAAAACCCAACCACCTACATTTCCGTTGG GACATCAACACTAAACCAGAGATTGGTACCAAGAATAGCTACTAGATCCA AAGTAAACGGGCAAAGTGGAAGGATGGAGTTCTTCTGGACAATTTTAAAA CCGAATGATGCAATCAACTTCGAGAGTAATGGAAATTTCATTGCTCCAGA ATATGCATACAAAATTGTCAAGAAAGGGGACTCAACAATTATGAAAAGTG AATTGGAATATGGTAACTGCAACACCAAGTGTCAAACTCCAATGGGGGCG ATAAACTCTAGTATGCCATTCCACAATATACACCCTCTCACCATCGGGGA ATGCCCCAAATATGTGAAATCAAACAGATTAGTCCTTGCGACTGGACTCA GAAATAGCCCTCAAAGAGAGAAAAGAAGAAAAAAGAGAGGATTATTTGGA GCTATAGCAGGTTTTATAGAGGGAGGATGGCAGGGAATGGTAGATGGTTG GTATGGGTACCACCATAGCAATGAGCAGGGGAGTGGGTACGCTGCAGACA AAGAATCCACTCAAAAGGCAATAGATGGAGTCACCAATAAGGTCAACTCG ATCATTGACAAAATGAACACTCAGTTTGAGGCCGTTGGAAGGGAATTTAA CAACTTAGAAAGGAGAATAGAGAATTTAAACAAGAAGATGGAAGACGGGT TCCTAGATGTCTGGACTTATAATGCTGAACTTCTGGTTCTCATGGAAAAT GAGAGAACTCTAGACTTTCATGACTCAAATGTCAAGAACCTTTACGACAA GGTCCGACTACAGCTTAGGGATAATGCAAAGGAGCTGGGTAACGGTTGTT TCGAGTTCTATCATAAATGTGATAATGAATGTATGGAAAGTGTAAGGAAC GGAACGTATGACTACCCGCAGTATTCAGAAGAAGCAAGACTAAAAAGAGA GGAAATAAGTGGAGTAAAATTGGAATCAATAGGAATTTACCAAATACTGT CAATTTATTCTACAGTAGCGAGTTCCCTAGCACTGGCAATCATGGTAGCT GGTCTATCCTTATGGATGTGCTTCAATGGGTCGTTACAATGCAGAATT >CK_HK_WF157_2003 ATGGAGAAAATAGTGCTTCTTCTTGCAATAGTCAGTCTTGTTAAAAGTGA TCAGATTTGCATTGGTTACCATGCAAACAACTCGACAGAGCAGGTTGACA CAATAATGGAAAAGAACGTTACTGTTACACATGCCCAAGACATACTGGAA AAGACCCACAACGGGAAGCTCTGCGACCTAGATGGAGTGAAGCCTCTAAT TTTGAGAGATTGTAGTGTAGCTGGATGGCTCCTCGGGAACCCAATGTGTG ACGAATTCATCAATGTACCGGAATGGTCTTACATAGTGGAGAAGGCCAGT CCATCCAATGACCTCTGTTACCCAGGGGATTTCAACAATTATGAAGAACT GAAACACCTATTGAGCAGAATAAACCATTTTGAGAAAATTCAGATCATCC CCAAAAGCTCTTGGTCCAATCATGAAGCCTCATCAGGGGTGAGCTCAGCA TGTCCATACCTGGGAAAGCCCTCCTTTTTCAGAAATGTGGTATGGCTTAT CAAAAAGAACAGTACATACCCAACAATAAAGAGGAGCTACAATAATACCA ACCAAGAAGATCTTTTGGTACTGTGGGGGATTCACCATCCTAATGATGCG GCAGAGCAGATAAAGCTCTATCAAAACCCAACCACCTATATTTCCGTTGG AACATCAACACTAAACCAGAGATTGGTACCAAAAATAGCTACTAGATCCA AAGTAAACGGGCAAAGTGGAAGGATGGAGTTCTTCTGGACAATTTTAAAA CCGAATGATGCAATCAACTTCGAGAGTAATGGAAATTTCATTGCTCCAGA ATATGCATACAAAATTGTCAAGAAAGGGGACTCAGCAATTATGAAAAGTG AATTGGAATATGGTAACTGCAACACCAAGTGTCAAACTCCAATGGGGGCG ATAAACTCTAGTATGCCCTTCCACAACATACACCCTCTCACCATCGGGGA ATGCCCCAAATATGTGAAATCAAACAGACTAGTCCTTGCGACTGGGCTCA GAAATAGCCCTCAAAGAGAGAGAAGAAGAAAAAAGAGAGGACTATTTGGA GCTATAGCGGGTTTTATAGAGGGAGGATGGCAGGGAATGGTAGATGGTTG GTATGGATACCACCATAGCAATGAGCAGGGGAGTGGATACGCTGCAGACA AAGAATCCACTCAAAAGGCAATAGATGGAGTCACCAATAAGGTCAACTCG ATCATTGACAAAATGAACACTCAGTTTGAGGCCGTTGGAAGGGAATTTAA TAACTTAGAAAGGAGAATAGAGAATTTAAACAAGAAGATGGAAGACGGAT TCCTAGATGTCTGGACTTATAATGCTGAACTTCTAGTTCTCATGGAAAAT GAGAGAACTCTAGACTTTCATGACTCAAATGTCAAGAACCTTTACGACAA GGTCCGACTACAGCTTAGGGATAATGCAAAAGAGCTGGGTAACGGTTGTT TCGAGTTCTATCACAAATGTGATAATGAATGTATGGAAAGTGTAAGAAAC GGAACGTATGACTACTCGCAGTATTCAGAAGAAGCAAGACTAAAAAGAGA GGAAATAAGTGGAGTAAAATTGGAATCAATAGGAACTTACCAAATACTGT CAATTTATTCAACAGTGGCGAGTTCCCTAGCACTGGCAATCATGGTAGCT GGTCTATCTTTATGGATGTGCTCCAATGGTTCGTTACAATGT------ >SWINE_ANHUI_1_2004 ATGGAGAAAATAGTGCTTCTTCTTGCAATAGTCAGTCTTGTTAAAGGTGA TCAGATTTGCACTGGTTACCATGCAAACAACTCGACAGAGCAGGTTGACA CAATAATGGAAAAGAACGTTACTGTTACACATGCTCAAGACATACTGGAA AAGACACACAACGGGAAGCTCTGCGACCTAGATGGAGTGAAGCCTCTAAT TTTAAGAGATTGTAGTGTAGCTGGATGGCTCCTCGGGAACCCAATGTGTG ACGAATTCATCAATGTGCCGGAATGGTCTTACATAGTGGAGAAGGCCAAT CCAGCCAATGACCTCTGTTACCCAGGGGATTTCAACGACTATGAAGAACT GAAACACCTATTGAGCAGAATAAACCATTTTGAGAAAATTCAGATCATCC CCAAAAGTTCTTGGTCCGATCATGAAGCCTCATCAGGGGTGAGCTCAGCA TGTCCATACCAGGGAAGGTCCTCCTTTTTCAGAAATGTGGTATGGCTTAT CAAAAAGAACAGTGCATACCCAACAATAAAGAGGAGCTACAATAATACCA ACCAAGAAGATCTTTTGGTACTGTGGGGGATTCACCACCCTAATGATGCG GCAGAGCAGATAAAGCTCTATCAAAACCCAACCACCTATATTTCCGTTGG GACATCAACACTAAACCAGAGATTGGTACCAAAAATAGCTACTAGATCCA AAGTAAACGGACAAAGTGGAAGAATGGAGTTCTTCTGGACAATTTTAAAA CCGAATGATGCTATCAATTTCGAGAGTAATGGAAATTTCATTGCTCCAGA ATATGCATACAAAATTGTCAAGAAAGGGGACTCTGCAATTATGAAAAGTG AATTGGAATATGGCAACTGCAACACCAAGTGTCAAACTCCAGTGGGGGCG ATAAATTCTAGCATGCCATTCCACAACATACACCCTCTCACCATCGGGGA ATGCCCCAAATATGTGAAATCAAACAGATTAGTCCTTGCGACTGGACTCA GAAATGCCCCTCAAAGAGAGGGAAGAAGAAAAAAGAGAGGACTATTTGGA GCTATAGCAGGGTTTATAGAGGGAGGATGGCAGGGGATGGTAGATGGTTG GTATGGGTACCACCATAGCAATGAGCAGGGGAGTGGATACGCTGCAGACA AAGAATCCACTCAAAAAGCAATAGATGGAGTCACCAATAAGGTCAACTCG ATCATTGACAAAATGAACACTCAGTTTGAGGCCGTTGGAAGGGAATTTAA TAACTTAGAAAGGAGAATAGAAAATTTAAACAAGAAGATGGAGGACGGAT TCCTAGATGTCTGGACTTATAATGCTGAACTTCTGGTTCTCATGGAAAAT GAGAGAACTCTAGACTTTCATGACTCAAATGTCAAGAACCTTTACGACAA GGTCCGACTACAGCTTAGGGATAATGCAAAGGAGCTGGGTAACGGTTGTT TCGAGTTCTATCACAGATGTGATAATGAATGTATGGAAAGTGTAAGAAAC GGAACGTATGACTACCCGCAGTATTCGGAAGAAGCAAGACTAAACAGAGA GGAAATAAGTGGAGTAAAATTGGAATCAATAGGAACTTACCAAATACTGT CAATTTATTCAACAGTGGCGAGTTCCCTAGCACTGGCAATCATGGTGGCT GGTCTATCTTTATGGATGTGCTCCAATGGATCGTTACAATGCAGAATT >HONGKONG_1_97_98 ------------------------------------------------GA CCAGATTTGCATTGGTTACCATGCAAACAACTCGACAGAGCAGGTTGATA CAATAATGGAAAAGAATGTTACTGTTACACATGCCCAAGACATACTGGAA AGGACACACGACGGGAAGCTCTGCGATCTAAATGGAGTGAAACCTCTCAT TTTGAGGGATTGTAGTGTAGCTGGATGGCTCCTCGGAAACCCTATGTGTG ACGAATTCATCAATGTGCCGGAATGGTCTTACATAGTGGAGAAGGCCAGT CCAGCCAATGACCTCTGTTATCCAGGGAATTTCAACGACTATGAAGAACT GAAACACCTATTGAGCAGAATAAACCATTTTGAGAAAATTCAGATCATCC CCAAAAGTTCTTGGTCCAATCATGATGCCTCATCAGGGGTGAGCTCAGCA TGTCCATACCTTGGGAGGTCCTCCTTTTTCAGAAATGTGGTATGGCTTAT CAAAAAGAACAGTGCATACCCAACAATAAAGAGGAGCTACAATAATACCA ACCAAGAAGATCTTTTGGTACTGTGGGGGATTCACCATCCTAATGATGCG GCAGAGCAGACAAAGCTCTATCAAAATCCAACCACCTACATTTCCGTTGG AACATCAACACTGAATCAGAGATTGGTTCCAGAAATAGCTACTAGACCCA AAGTAAACGGGCAAAGTGGAAGAATGGAGTTCTTCTGGACAATTTTAAAG CCGAATGATGCCATCAATTTCGAGAGTAATGGAAATTTCATTGCCCCAGA ATATGCATACAAAATTGTCAAGAAAGGGGACTCAACAATTATGAAAAGTG AATTGGAATATGGTAACTGCAACACCAAGTGTCAAACTCCAATGGGGGCG ATAAACTCTAGTATGCCATTCCACAACATACACCCCCTCACCATCGGGGA ATGCCCCAAATATGTGAAATCAAACAGATTAGTTCTTGCGACTGGACTCA GAAATACCCCTCATAGGGAGAGAAGAAGAAAAAAGAGAGGACTATTTGGA GCTATAGCAGGTTTTATAGAAGGAGGATGGCAGGGAATGGTAGATGGTTG GTATGGGTACCACCATAGCAATGAGCAGGGGAGTGGATACGCTGCAGACC AAGAATCCACTCAAAAGGCAATAGATGGAGTCACCAATAAGGTCAACTCG ATCATTAACAAAATGAACACTCAGTTTGAGGCCGTTGGAAGGGAATTTAA TAACTTAGAAAGGAGAATAGAGAATTTAAACAAGAAAATGGAAGACGGAT TCCTAGATGTCTGGACTTACAATGCTGAACTTCTGGTTCTCATGGAAAAT GAGAGAACTCTCGACTTTCATGACTCAAATGTCAAGAACCTTTACGACAA GGTCCGACTACAGCTTAGGGATAATGCAAAGGAACTGGGTAATGGTTGTT TCGAATTCTATCACAAATGTGATAATGAATGTATGGAAAGTGTAAAAAAC GGAACGTATGACTACCCGCAGTATTCAGAAGAAGCAAGACTAAACAGAGA GGAAATAAGTGGAGTAAAATTGGAATCAATGGGAACTTACCAAATACTGT CAATTTATTCAACAGTGGCGAGTTCCCTAGCACTGGCAATCATGGTAGCT GGTCTATCTTTATGGATGTGCTCCAATGGATCGTTACAATGCAGAATT >GOOSE_SHANTOU_2216_2005 ATGGAGAAAATAGTGCTTCTTCTTGCAATAATCAGCCTTGTTAAAAGTGA TCAGATTTGCATTGGTTACCATGCAAACAACTCGACAGAGCAGGTTGACA CAATAATGGAAAAGAACGTTACTGTTACACATGCCCAAGACATACTGGAA AAGACACACAATGGGAAGCTCTGCGACTTAGATGGGGTGAAGCCTCTAAT TTTGAGAGACTGTAGTGTAGCTGGATGGCTCCTCGGGAACCCAATGTGTG ACGAATTCATCAATGTACCGGAATGGTCTTACATAGTGGAGAAGGCCAGT CCAGCCAATGACCTCTGTTACCCAGGTGATTTCAACGATTATGAAGAACT GAAACACCTATTGAGCAGAATAAACCATTTTGAGAAAATTCAGATCATCC CCAAAAGTTCTTGGTCCAATCATGAAGCCTCATCAGGGGTGAGCTCAGCA TGTCCATACCTGGGAAAGCCCTCCTTTTTCAGAAATGTGGTATGGCTTAT CAAAAAGAACAGTGCATACCCAACAATAAAGAGGAGCTACAATAATACCA ACCAAGAAGATCTTTTGGTACTGTGGGGGATTCACCATCCTAATGATGCG GCAGAGCAGACAAAGCTCTATCAAAACCCAATCACCTATATTTCCGTTGG AACATCAACACTAAACCAGAGATTGGTACCAAAAATAGCTACCAGATCCA AAGTAAACGGGCAAAGTGGAAGGATGGAGTTCTTCTGGACAATTTTAAAA CCGAATGATTCAATCAACTTCGAGAGTAATGGAAATTTCATTGCTCCAGA ATATGCATACAAAATTGTCAAGAAAGGGGACTCAGCAATTATGAAAAGCG AATTGGAATATGGTAACTGCAACACCAAGTGTCAAACTCCAATGGGGGCG ATAAACTCTAGTATGCCATTCCACAACATACACCCTCTCACCATCGGGGA ATGCCCCAAATATGTGAAATCAAACAGATTAGTCCTTGCGACTGGGCTCA GAAATAGCCCTCAAAGAGAGAGAAGAAGAAAGAAGAGAGGACTATTTGGA GCTATAGCAGGTTTTATAGAGGGAGGATGGCAGGGAATGGTAGATGGTTG GTATGGATACCACCATAGCAATGAGCAGGGGAGTGGATACGCTGCAGACA AAGAATCCACTCAAAAGGCAATAGATGGAGTCACCAATAAGGTCAACTCG ATCATTGACAAAATGAACACTCAGTTTGAGGCCGTTGGAAGGGAATTTAA TAACTTAGAAAGGAGAATAGAGAATTTAAACAAGAAGATGGAAGACGGAT TCCTAGATGTCTGGACTTATAATGCTGAACTTCTGGTTCTCATGGAAAAT GAGAGAACTCTAGACTTTCATGACTCAAATGTCAAGAACCTTTACGACAA GGTCCGACTACAGCTTAGGGATAATGCAAAAGAGCTAGGTAACGGTTGTT TCGAGTTCTATCACAAATGTGATAATGAATGCATGGAAAGTGTAAGAAAC GGAACGTATGACTACCCGCAATATTCAGAAGAAGCAAGGCTAAAAAGAGA GGAAATTAGTGGAGTAAAATTGGAATCAATAGGAACTTACCAAATACTGT CAATTTATTCAACAGTGGCAAGTTCCCTAGCGCTGGCAATCATGGTAGCT GGTCTATCTTTATGGATGTGCTCCAATGGTTCGTTACAATGCAGAATT >PEREGRINEFALCON_HK_D0028_2004 ATGGAGAAAATAGTGCTTCTTCTTGCAATAGTCAGTCTTGTTAAAAGTGA TCAGATTTGCATTGGTTACCATGCAAACAACTCGACAGAGCAGGTTGACA CAATAATGGAAAAGAATGTTACTGTTACACATGCCCAAGACATACTGGAA AAGACACACAATGGGAAGCTCTGTGACCTAGATGGGGTGAAGCCTCTAAT TTTGAGAGATTGTAGTGTCGCTGGATGGCTCCTCGGGAACCCAATGTGTG ACGAATTCATCAATGTACCGGAATGGTCTTACATAGTGGAGAAGGCCAGT CCAGCCAATGACCTCTGTTACCCAGGTGATTTCAACGATTATGAAGAACT GAAACACCTATTGAGCAGAATAAACCATTTTGAGAAAATTCAGATCATCC CCAAAAGTTCTTGGTCCAATCATGAAGCCTCATCAGGGGTGAGCTCAGCA TGTCCATACCTGGGAAAGCCCTCCTTTTTCAGAAATGTGGTATGGCTTAT CAAAAAGAACAGTGCATACCCAACAATAAAGAGGAGCTACAATAATACCA ACCAAGAAGATCTTTTGGTACTGTGGGGGATTCACCATCCTAATGATGCG GCAGAGCAGACAAAGCTCTATCAAAACCCAACCACCTATGTTTCCGTTGG AACATCAACACTAAACCAGAGATTGGTACCAAAAATAGCCACCAGATCCA AAGTAAACGGGCAAAGTGGAAGGATGGAGTTCTTCTGGACAATTTTAAAA CCGAATGATGCAATCAACTTCGAGAGTAATGGAAATTTCATTGCTCCAGA ATATGCATACAAAATTGTCAAGAAAGGGGACTCAGCAATTATGAAAAGTG AATTGGAATATGGTAACTGCAATACCAAGTGTCAAACTCCAATGGGGGCG ATAAACTCTAGTATGCCATTCCACAACATACACCCTCTCACCATCGGGGA ATGCCCCAAATATGTGAAATCAAACAGATTAGTCCTTGCGACTGGGCTCA GAAATAGCCCTCAAAGAGAGAGAAGAAGAAAAAAGAGAGGACTATTTGGA GCTATAGCAGGTTTTATAGAGGGAGGATGGCAGGGAATGGTAGATGGTTG GTATGGATACCACCATAGCAATGAGCAGGGGAGTGGATACGCTGCAGACA AAGAATCCACTCAAAAGGCAATAGATGGAGTCACCAATAAGGTCAACTCG ATCATTGACAAAATGAACACTCAGTTTGAGGCCGTTGGAAGGGAATTTAA TAACTTAGAAAGGAGAATAGAGAATTTAAACAAGAAGATGGAAGACGGAT TCCTAGATGTCTGGACTTATAATGCTGAACTTCTGGTTCTCATGGAAAAT GAGAGAACTCTAGACTTTCATGACTCAAATGTCAAGAACCTTTACGACAA GGTCCGACTACAGCTTAGGGATAATGCAAAAGAGCTGGGTAACGGTTGTT TCGAGTTCTATCACAAATGTGATAATGAATGTATGGAAAGTGTAAGAAAC GGAACGTATGACTACCCGCAGTATTCAGAAGAAGCAAGACTAAAAAGAGA GGAAATAAGTGGAGTAAAATTGGAATCAATAGGAACTTACCAAATACTGT CAATTTATTCAACAGTGGCGAGTTCCCTAGCGCTGGCAATCATGGTAGCT GGTCTATCTTTATGGATGTGCTCC------------------------ >HONGKONG_1_538_97 ------------------------------------------------GA TCAGATTTGCATTGGTTACCATGCAAACAACTCGACAGAGCAGGTTGACA CAATAATGGAAAAGAATGTTACTGTTACACATGCCCAAGACATACTGGAA AGGACACACAACGGGAAGCTCTGCGATCTAAATGGAGTGAAACCTCTCAT TTTGAGGGATTGTAGTGTAGCTGGATGGCTCCTCGGAAACCCTATGTGTG ACGAATTCATCAATGTGCCGGAATGGTCTTACATAGTGGAGAAGGCCAGT CCAGCCAATGACCTCTGTTATCCAGGGAATTTCAACGACTATGAAGAACT GAAACACCTATTGAGCAGAATAAACCATTTTGAGAAAATTCAGATCATCC CCAAAAGTTCTTGGTCCAATCATGATGCCTCATCAGGGGTGAGCTCAGCA TGTCCATACCTTGGGAGGTCCTCCTTTTTCAGAAATGTGGTATGGCTTAT CAAAAAGAACAGTGCATACCCAACAATAAAGAGGAGCTACAATAATACCA ACCAAGAAGATCTTTTGGTACTGTGGGGGATTCACCATCCTAATGATGCG GCAGAGCAGACAAAGCTCTATCAAAATCCAACCACCTACATTTCCGTTGG AACATCAACACTGAACCAGAGATTGGTTCCAGAAATAGCTACTAGACCCA AAGTAAACGGGCAAAGTGGAAGAATGGAGTTCTTCTGGACAATTTTAAAG CCGAATGATGCCATCAATTTCGAGAGTAATGGAAATTTCATTGCCCCAGA ATATGCATACAAAATTGTCAAGAAAGGGGACTCAACAATTATGAAAAGTG AATTGGAATATGGTAACTGCAACACCAAGTGTCAAACTCCAATGGGGGCG ATAAACTCTAGTATGCCATTCCACAACATACACCCCCTCACCATCGGGGA ATGCCCCAAATATGTGAAATCAAACAGATTAGTTCTTGCGACTGGACTCA GAAATACCCCTCAAAGGGAGAGAAGAAGAAAAAAGAGAGGACTATTTGGA GCTATAGCAGGTTTTATAGAGGGAGGATGGCAGGGAATGGTAGATGGTTG GTATGGGTACCACCATAGCAATGAGCAGGGGAGTGGATACGCTGCAGACC AAGAATCCACTCAAAAGGCAATAGATGGAGTCACCAATAAGGTCAACTCG ATCATTAACAAAATGAACACTCAGTTTGAGGCCGTTGGAAGGGAATTTAA TAACTTAGAAAGGAGAATAGAGAATTTAAACAAGAAAATGGAAGACGGAT TCCTAGATGTCTGGACTTACAATGCTGAACTTCTGGTTCTCATGGAAAAT GAGAGAACTCTCGACTTTCATGACTCAAATGTCAAGAACCTTTACGACAA GGTCCGACTACAGCTTAGGGATAATGCAAAGGAACTGGGTAATGGTTGTT TCGAATTCTATCACAAATGTGATAATGAATGTATGGAAAGTGTAAGAAAC GGAACGTATGACTACCCGCAGTATTCAGAAGAAGCAAGACTAAACAGAGA GGAAATAAGTGGAGTAAAATTGGAATCAATGGGAACTTACCAAATACTGT CAATTTATTCAACAGTGGCGAGTTCCCTAGCACTGGCAATCATGGTAGCT GGTCTATCTTTATGGATGTGCTCCAATGGATCGTTACAATGCAGAATT \ No newline at end of file +>CHICKEN_HEBEI_326_2005 ATGGAGAGAATAGTGCTTCTTCTTGCAATAATCGGTCTTGTTAAAAGTGA TCAGATTTGCATTGGTTACCATGCAAACAACTCGACAGAGCAGGTTGACA CAATAATGGAAAAGAACGTTACTGTTACACATGCTCAAGACATACTGGAG AAGACACACAACGGGAAGCTCTGCAACCCAGATGGAGTGAAGCCTCTAAT TTTGAAAGATTGTAGTGTAGCTGGATGGCTCCTCGGAAACCCAATGTGTG ACGAATTTATCAATGTGCCGGAATGGTCTTACATAGTGGAGAAGGCCAGT CCAGCCAATGGCCTCTGTTACCCAGGGGATTTCAATGACTATGAAGAACT GAAACACCTATTGAGCAGAATAAACCATTTTGAGAAAATTCAGATCATCC CCAAAAGTTCTTGGTCCGATCATGGAGCCTCATCAGGGGTGAGCTCAGCA TGTTCCTATCTGGGGAAGCCCTCCTTTTTCAGAAATGTGGTATGGCTTAT CAAAAAGAATAATACATACCCACCAATAAAGGTGAGCTACAACAATACCA ACCAAGAAGATCTTTTGGTACTGTGGGGGATTCACCATCCCAATGATGAG GCAGAGCAGATAAAGATCTATCAAAACCCAACCACCTATATTTCCGTTGG AACATCAACACTAAACCAGAGATTGGTACCAAAAATAGCTACTAGATCCA AAGTAAACGGGCAAAGTGGAAGAATGGAGTTCTTCTGGACAATTTTAAAG CCGAATGATGCTATCAATTTCGATAGTAATGGAAATTTCATTGCTCCAGA ATATGCATACAAAATTGTCAAGAAAGGGGACTCAGCGATTATGAAAAGTG AATTGGAATATGGCAACTGCAACACCAAGTGTCAAACTCCAATGGGGGCG ATAAATTCTAGTATGCCATTCCACAACATACACCCTCTCACCGTCGGGGA ATGCCCCAAATATGTGAAATCAAACAGATTAGTCCTCGCGACTGGACTCA GAAATGCCCCTCAAAGAGAGGGAGGAAGAAAAAAGAGAGGACTATTTGGA GCCATAGCAGGGTTTATAGAGGGAGGATGGCAGGGAATGGTAGATGGTTG GTATGGGTACCACCATAGCAATGAGCAGGGGAGTGGATACGCTGCAGACA AAGAATCCACTCAAAAGGCAATAGATGGAGTCACCAATAAGGTCAACTCG ATCATTGACAAAATGAACACTCAGTTTGAGGCCGTTGGAAGGGAATTTAA TAACTTAGAAAGGAGAATAGAAAATTTAAACAAGAAGATGGAGGACGGAT TCCTAGATGTCTGGACTTATAACGCTGAACTTCTGGTTCTCATGGAAAAT GAGAGAACTCTAGACTTTCATGACTCAAATGTCAAGAACCTTTACGAAAA GGTCCGACTACAGCTTAGGGATAATGCAAAGGAGCTGGGTAACGGTTGTT TCGAGTTCTATCACAAATGTGATAATGAATGTATGGAAAGTGTAAAAAAC GGAACGTATGACTACCCGCAGTATTCAGAAGAAGCAAGACTAAACAGAGA GGAAATAAGTGGAGTAAAATTGGAATCAATGGGAACTTACCAAATACTGT CAATTTATTCAACAGTGGCGAGTTCCCTAGCATTGGCAATCATGGTAGCT GGTCTATCTTTATGGATGTGCTCCAATGGATCGTTACAATGCAGAATT >MALLARD_VIETNAM_16_2003 ATGGAGAAAATAGTGCTTCTTTTTGCAATAGTCAGTCTTGTTAAAAGTGA TCAGATTTGCATTGGTTACCATGCAAACAACTCGACAGAGCAGGTTGACA CAATAATGGAAAAGAACGTTACTGTTACACATGCCCAAGACATACTGGAA AAGACACACAACGGGAAGCTCTGCGATCTAGATGGAGTGAAGCCTCTAAT TTTGAGAGATTGTAGTGTAGCTGGATGGCTCCTCGGAAACCCAATGTGTG ACGAATTCATCAATGTGCCGGAATGGTCTTACATAGTGGAGAAGGCCAAT CCAGTCAATGACCTCTGTTACCCAGGGGATTTCAATGAATATGAAGAATT GAAACACCTATTGAGCAGAATAAACCATTTTGAGAAAATTCAGATCATCC CCAAAAGTTCTTGGTCCAGTCATGAAGCCTCATTAGGGGTGAGCTCAGCA TGTCCATACCAGGGAAAGTCCTCCTTTTTCAGAAATGTGGTATGGCTTGT CAAAAAGAACAGTACATACCCAACAATAAAGAGGAGCTACAATAATACCA ACCAAGAAGATCTTTTGGTACTGTGGGGGATTCACCATCCTAATGATGCG GCAGAGCAGACAAAGCTCTATCAAAATCCAACCACCTACATTTCCGTTGG GACATCAACACTAAACCAGAGATTGGTACCAAGAATAGCTACTAGATCCA AAGTAAACGGGCAAAGTGGAAGGATGGAGTTCTTCTGGACAATTTTAAAA CCGAATGATGCAATCAACTTCGAGAGTAATGGAAATTTCATTGCTCCAGA ATATGCATACAAAATTGTCAAGAAAGGGGACTCAACAATTATGAAAAGTG AATTGGAATATGGTAACTGCAACACCAAGTGTCAAACTCCAATGGGGGCG ATAAACTCTAGTATGCCATTCCACAATATACACCCCCTCACCATCGGGGA ATGCCCCAAATATGTGAAATCAAACAGATTAGTCCTTGCGACTGGGCTCA GAAATAGCCCTCAAAGAGAGAGAAGAAGAAAAAAGAGAGGATTATTTGGA GCTATAGCAGGTTTTATAGAGGGAGGATGGCAAGGAATGGTAGATGGTTG GTATGGGTACCACCATAGCAATGAGCAGGGGAGTGGGTACGCTGCAGACA AAGAATCCACTCAAAAGGCAATAGATGGAGTCACCAATAAGGTCAACTCG ATCATTGACAAAATGAACACTCAGTTTGAGGCCGTTGGAAGGGAATTTAA CAACTTAGAAAGGAGAATAGAGAATTTAAACAAGAAGATGGAAGACGGGT TCCTAGATGTCTGGACTTATAATGCTGAACTTCTGGTTCTCATGGAAAAT GAGAGAACTCTAGACTTTCATGACTCAAATGTCAAGAACCTTTACGACAA GGTCCGACTACAGCTTAGGGATAATGCAAAGGAGCTGGGTAACGGTTGTT TCGAGTTCTATCATAAATGTGATAATGAATGTATGGAAAGTGTAAGAAAC GGAACGTATGACTACCCGCAGTATTCAGAAGAAGCAAGACTAAAAAGAGA GGAAATAAGTGGAGTAAAATTGGAATCAATAGGAATTTACCAAATACTGT CAATTTATTCTACAGTGGCGAGTTCCCTAGCACTGGCAATCATGGTAGCT GGTCTATCCTTATGGATGTGCTCCAATGGGTCGTTACAATGCAGA--- >CHICKEN_CK_160_2005 ATGGAGAAAATAGTGCTTCTTTTTGCAATAGTCAGTCTTGTTAAAAGTGA TCAGATTTGCATTGGTTACCATGCAAACAACTCAACAGAGCAGGTTGACA CAATAATGGAAAAGAACGTTACTGTTACACATGCCCAAGACATACTGGAA AAGACACACAACGGGAAGCTCTGTGATCTAGATGGAGTGAAGCCTCTAAT TTTGAGAGATTGTAGTGTAGCTGGATGGCTCCTTGGAAACCCAATGTGTG ATGAATTCATCAATGTGCCGGAATGGTCTTACATAGTGGAGAAGGCCAAT CCAGCCAATGACCTCTGTTACCCAGGGGATTTCAATGACTATGAAGAATT GAAACACCTATTGAGCAGAATAAACCATTTTGAGAAAATTCAGATCATCC CCAAAAGTTCTTGGTCCAGTCATGAAGCCTCATTAGGAGTGAGCTCAGCA TGTCCATATCAGGGAAAGTCCTCCTTTTTCAGAAATGTGGTATGGCTTAT CAAAAAGAACAGTACATACCCAACAATAAAGAGGAGCTACAATAATACCA ACCAAGAAGATCTTTTGGTACTGTGGGGGATTCACCATCCTAATGATGCG GCAGAGCAGACAAAGCTCTATCAAAACCCAACCACCTACATTTCCGTTGG GACATCAACACTAAACCAGAGATTGGTACCAAGAATAGCTACTAGATCCA AAGTAAACGGGCAAAGTGGAAGGATGGAGTTCTTCTGGACAATTTTAAAA CCGAATGATGCAATCAACTTCGAGAGTAATGGAAATTTCATTGCTCCAGA ATATGCATACAAAATTGTCAAGAAAGGGGACTCAACAATTATGAAAAGTG AATTGGAATATGGTAACTGCAACACCAAGTGTCAAACTCCAATGGGGGCG ATAAACTCTAGTATGCCATTCCACAATATACACCCTCTCACCATCGGGGA ATGCCCCAAATATGTGAAATCAAACAGATTAGTCCTTGCGACTGGACTCA GAAATAGCCCTCAAAGAGAGAAAAGAAGAAAAAAGAGAGGATTATTTGGA GCTATAGCAGGTTTTATAGAGGGAGGATGGCAGGGAATGGTAGATGGTTG GTATGGGTACCACCATAGCAATGAGCAGGGGAGTGGGTACGCTGCAGACA AAGAATCCACTCAAAAGGCAATAGATGGAGTCACCAATAAGGTCAACTCG ATCATTGACAAAATGAACACTCAGTTTGAGGCCGTTGGAAGGGAATTTAA CAACTTAGAAAGGAGAATAGAGAATTTAAACAAGAAGATGGAAGACGGGT TCCTAGATGTCTGGACTTATAATGCTGAACTTCTGGTTCTCATGGAAAAT GAGAGAACTCTAGACTTTCATGACTCAAATGTCAAGAACCTTTACGACAA GGTCCGACTACAGCTTAGGGATAATGCAAAGGAGCTGGGTAACGGTTGTT TCGAGTTCTATCATAAATGTGATAATGAATGTATGGAAAGTGTAAGGAAC GGAACGTATGACTACCCGCAGTATTCAGAAGAAGCAAGACTAAAAAGAGA GGAAATAAGTGGAGTAAAATTGGAATCAATAGGAATTTACCAAATACTGT CAATTTATTCTACAGTAGCGAGTTCCCTAGCACTGGCAATCATGGTAGCT GGTCTATCCTTATGGATGTGCTTCAATGGGTCGTTACAATGCAGAATT >CK_HK_WF157_2003 ATGGAGAAAATAGTGCTTCTTCTTGCAATAGTCAGTCTTGTTAAAAGTGA TCAGATTTGCATTGGTTACCATGCAAACAACTCGACAGAGCAGGTTGACA CAATAATGGAAAAGAACGTTACTGTTACACATGCCCAAGACATACTGGAA AAGACCCACAACGGGAAGCTCTGCGACCTAGATGGAGTGAAGCCTCTAAT TTTGAGAGATTGTAGTGTAGCTGGATGGCTCCTCGGGAACCCAATGTGTG ACGAATTCATCAATGTACCGGAATGGTCTTACATAGTGGAGAAGGCCAGT CCATCCAATGACCTCTGTTACCCAGGGGATTTCAACAATTATGAAGAACT GAAACACCTATTGAGCAGAATAAACCATTTTGAGAAAATTCAGATCATCC CCAAAAGCTCTTGGTCCAATCATGAAGCCTCATCAGGGGTGAGCTCAGCA TGTCCATACCTGGGAAAGCCCTCCTTTTTCAGAAATGTGGTATGGCTTAT CAAAAAGAACAGTACATACCCAACAATAAAGAGGAGCTACAATAATACCA ACCAAGAAGATCTTTTGGTACTGTGGGGGATTCACCATCCTAATGATGCG GCAGAGCAGATAAAGCTCTATCAAAACCCAACCACCTATATTTCCGTTGG AACATCAACACTAAACCAGAGATTGGTACCAAAAATAGCTACTAGATCCA AAGTAAACGGGCAAAGTGGAAGGATGGAGTTCTTCTGGACAATTTTAAAA CCGAATGATGCAATCAACTTCGAGAGTAATGGAAATTTCATTGCTCCAGA ATATGCATACAAAATTGTCAAGAAAGGGGACTCAGCAATTATGAAAAGTG AATTGGAATATGGTAACTGCAACACCAAGTGTCAAACTCCAATGGGGGCG ATAAACTCTAGTATGCCCTTCCACAACATACACCCTCTCACCATCGGGGA ATGCCCCAAATATGTGAAATCAAACAGACTAGTCCTTGCGACTGGGCTCA GAAATAGCCCTCAAAGAGAGAGAAGAAGAAAAAAGAGAGGACTATTTGGA GCTATAGCGGGTTTTATAGAGGGAGGATGGCAGGGAATGGTAGATGGTTG GTATGGATACCACCATAGCAATGAGCAGGGGAGTGGATACGCTGCAGACA AAGAATCCACTCAAAAGGCAATAGATGGAGTCACCAATAAGGTCAACTCG ATCATTGACAAAATGAACACTCAGTTTGAGGCCGTTGGAAGGGAATTTAA TAACTTAGAAAGGAGAATAGAGAATTTAAACAAGAAGATGGAAGACGGAT TCCTAGATGTCTGGACTTATAATGCTGAACTTCTAGTTCTCATGGAAAAT GAGAGAACTCTAGACTTTCATGACTCAAATGTCAAGAACCTTTACGACAA GGTCCGACTACAGCTTAGGGATAATGCAAAAGAGCTGGGTAACGGTTGTT TCGAGTTCTATCACAAATGTGATAATGAATGTATGGAAAGTGTAAGAAAC GGAACGTATGACTACTCGCAGTATTCAGAAGAAGCAAGACTAAAAAGAGA GGAAATAAGTGGAGTAAAATTGGAATCAATAGGAACTTACCAAATACTGT CAATTTATTCAACAGTGGCGAGTTCCCTAGCACTGGCAATCATGGTAGCT GGTCTATCTTTATGGATGTGCTCCAATGGTTCGTTACAATGT------ >SWINE_ANHUI_1_2004 ATGGAGAAAATAGTGCTTCTTCTTGCAATAGTCAGTCTTGTTAAAGGTGA TCAGATTTGCACTGGTTACCATGCAAACAACTCGACAGAGCAGGTTGACA CAATAATGGAAAAGAACGTTACTGTTACACATGCTCAAGACATACTGGAA AAGACACACAACGGGAAGCTCTGCGACCTAGATGGAGTGAAGCCTCTAAT TTTAAGAGATTGTAGTGTAGCTGGATGGCTCCTCGGGAACCCAATGTGTG ACGAATTCATCAATGTGCCGGAATGGTCTTACATAGTGGAGAAGGCCAAT CCAGCCAATGACCTCTGTTACCCAGGGGATTTCAACGACTATGAAGAACT GAAACACCTATTGAGCAGAATAAACCATTTTGAGAAAATTCAGATCATCC CCAAAAGTTCTTGGTCCGATCATGAAGCCTCATCAGGGGTGAGCTCAGCA TGTCCATACCAGGGAAGGTCCTCCTTTTTCAGAAATGTGGTATGGCTTAT CAAAAAGAACAGTGCATACCCAACAATAAAGAGGAGCTACAATAATACCA ACCAAGAAGATCTTTTGGTACTGTGGGGGATTCACCACCCTAATGATGCG GCAGAGCAGATAAAGCTCTATCAAAACCCAACCACCTATATTTCCGTTGG GACATCAACACTAAACCAGAGATTGGTACCAAAAATAGCTACTAGATCCA AAGTAAACGGACAAAGTGGAAGAATGGAGTTCTTCTGGACAATTTTAAAA CCGAATGATGCTATCAATTTCGAGAGTAATGGAAATTTCATTGCTCCAGA ATATGCATACAAAATTGTCAAGAAAGGGGACTCTGCAATTATGAAAAGTG AATTGGAATATGGCAACTGCAACACCAAGTGTCAAACTCCAGTGGGGGCG ATAAATTCTAGCATGCCATTCCACAACATACACCCTCTCACCATCGGGGA ATGCCCCAAATATGTGAAATCAAACAGATTAGTCCTTGCGACTGGACTCA GAAATGCCCCTCAAAGAGAGGGAAGAAGAAAAAAGAGAGGACTATTTGGA GCTATAGCAGGGTTTATAGAGGGAGGATGGCAGGGGATGGTAGATGGTTG GTATGGGTACCACCATAGCAATGAGCAGGGGAGTGGATACGCTGCAGACA AAGAATCCACTCAAAAAGCAATAGATGGAGTCACCAATAAGGTCAACTCG ATCATTGACAAAATGAACACTCAGTTTGAGGCCGTTGGAAGGGAATTTAA TAACTTAGAAAGGAGAATAGAAAATTTAAACAAGAAGATGGAGGACGGAT TCCTAGATGTCTGGACTTATAATGCTGAACTTCTGGTTCTCATGGAAAAT GAGAGAACTCTAGACTTTCATGACTCAAATGTCAAGAACCTTTACGACAA GGTCCGACTACAGCTTAGGGATAATGCAAAGGAGCTGGGTAACGGTTGTT TCGAGTTCTATCACAGATGTGATAATGAATGTATGGAAAGTGTAAGAAAC GGAACGTATGACTACCCGCAGTATTCGGAAGAAGCAAGACTAAACAGAGA GGAAATAAGTGGAGTAAAATTGGAATCAATAGGAACTTACCAAATACTGT CAATTTATTCAACAGTGGCGAGTTCCCTAGCACTGGCAATCATGGTGGCT GGTCTATCTTTATGGATGTGCTCCAATGGATCGTTACAATGCAGAATT \ No newline at end of file
--- a/test-data/meme-in1.nhx Mon Feb 17 14:52:11 2020 -0500 +++ b/test-data/meme-in1.nhx Thu Feb 20 18:10:47 2020 -0500 @@ -1,1 +1,1 @@ -((((((CHICKEN_HEBEI_326_2005:0.02100885319673648,(SWINE_ANHUI_1_2004:0.007702393698306516):0.002095219592954275):0.003887237703073042):0.003404921392531202,(((CHICKEN_HONGKONG_915_97,(GOOSE_HONGKONG_W355_97):0.002899766890966483):0.001306376767766534,HONGKONG_1_97_98:0.003844928589233716):0.000182535836694054,HONGKONG_1_538_97):0.02096173714686362):0.003130608143291779,(((GOOSE_SHANTOU_2216_2005:0.006207842095177651):0.002530613798219486,PEREGRINEFALCON_HK_D0028_2004:0.003608296348267232):0.003288900909856382,CK_HK_WF157_2003:0.00663129750258774):0.004655295319725731):0.0116808817874948,(((HUMAN_VIETNAM_CL105_2005:0.006521522005742001):0.001967887030302483,HUMAN_VIETNAM_3062_2004:0.001641397323851184):0.0003125512332168847,MALLARD_VIETNAM_16_2003:0.003244216605281072):0.0004125980823087554):0.0003400912533471183,CHICKEN_CK_160_2005:0.006168335080088849) +((((((CHICKEN_HEBEI_326_2005:0.02100885319673648,(SWINE_ANHUI_1_2004:0.007702393698306516):0.002095219592954275):0.003887237703073042)):0.003130608143291779,(CK_HK_WF157_2003:0.00663129750258774):0.004655295319725731):0.0116808817874948,(MALLARD_VIETNAM_16_2003:0.003244216605281072):0.0004125980823087554):0.0003400912533471183,CHICKEN_CK_160_2005:0.006168335080088849)
--- a/test-data/meme-out1.json Mon Feb 17 14:52:11 2020 -0500 +++ b/test-data/meme-out1.json Thu Feb 20 18:10:47 2020 -0500 @@ -4,568 +4,568 @@ "0": [ [0, 0, 1, 0, 0, 0, 1, 0, 0], [0, 0, 1, 0, 0, 0, 1, 0, 0], - [0, 0, 0, 1.817789942174416, 1, 0, 0.6666666666666666, 0, 0.1215618554703716], - [0, 0, 1, 0, 0, 0, 1, 0, 0], - [0, 0, 1, 0, 0, 0, 1, 0, 0], - [0, 0, 1, 0, 0, 0, 1, 0, 0], - [0, 0, 1, 0, 0, 0, 1, 0, 0], - [0, 0, 0, 1.900735833403759, 1, 0, 0.6666666666666666, 0, 0.1271087320415013], - [4.223295318660594, 0, 0.1812832787403597, 0, 0.8187167212596403, 0, 0.6666666666666666, 0, 0.1220041843130002], - [0, 0, 0, 1.454313013998262, 1, 0, 0.6666666666666666, 0, 0.0972549051541481], - [0, 0, 0, 3.87077558632765, 1, 0, 0.6666666666666666, 0, 0.2588520551613089], - [5.621376790757513, 1.370160457631764, 0.9999999999999731, 0.7647952134694137, 2.686739719592879e-14, 0, 0.6666666666666666, 0, 0.254019836850675], - [0, 0, 1, 0, 0, 0, 1, 0, 0], - [0, 0, 1, 0, 0, 0, 1, 0, 0], - [0, 0, 1, 0, 0, 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"EBF site 200 (partition 1)":1, @@ -808,206 +627,20 @@ "EBF site 206 (partition 1)":1, "EBF site 209 (partition 1)":1, "EBF site 21 (partition 1)":1, - "EBF site 211 (partition 1)":0.6737403783181751, "EBF site 213 (partition 1)":1, - "EBF site 214 (partition 1)":0.1418107606887018, "EBF site 217 (partition 1)":1, - "EBF site 221 (partition 1)":1, - "EBF site 222 (partition 1)":1, - "EBF site 224 (partition 1)":1, - "EBF site 226 (partition 1)":1, "EBF site 228 (partition 1)":1, - "EBF site 230 (partition 1)":1, - "EBF site 231 (partition 1)":1, - "EBF site 233 (partition 1)":1, "EBF site 237 (partition 1)":1, - "EBF site 240 (partition 1)":1, "EBF site 241 (partition 1)":1, "EBF site 250 (partition 1)":1, "EBF site 254 (partition 1)":1, "EBF site 256 (partition 1)":1, "EBF site 258 (partition 1)":1, - "EBF site 265 (partition 1)":1, - "EBF site 271 (partition 1)":1, "EBF site 278 (partition 1)":1, "EBF site 279 (partition 1)":1, "EBF site 28 (partition 1)":1, - "EBF site 283 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(partition 1)":1, "EBF site 112 (partition 1)":1, "EBF site 113 (partition 1)":1, "EBF site 117 (partition 1)":1, @@ -2328,27 +1056,22 @@ "EBF site 136 (partition 1)":1, "EBF site 140 (partition 1)":1, "EBF site 142 (partition 1)":1, - "EBF site 145 (partition 1)":0.9804466477838129, + "EBF site 145 (partition 1)":1, "EBF site 146 (partition 1)":1, - "EBF site 147 (partition 1)":1, - "EBF site 150 (partition 1)":0.9398379405190808, "EBF site 152 (partition 1)":1, "EBF site 153 (partition 1)":1, - "EBF site 154 (partition 1)":0.7997863164754097, + "EBF site 154 (partition 1)":1, "EBF site 155 (partition 1)":1, "EBF site 156 (partition 1)":1, "EBF site 157 (partition 1)":1, - "EBF site 16 (partition 1)":1, - "EBF site 167 (partition 1)":97545.48844556566, - "EBF site 17 (partition 1)":1, + "EBF site 16 (partition 1)":0.9791249761304802, + "EBF site 167 (partition 1)":6.755467986468297, "EBF site 170 (partition 1)":1, "EBF site 171 (partition 1)":1, "EBF site 172 (partition 1)":1, "EBF 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GTR":0.003553392842782155, - "original name":"MALLARD_VIETNAM_16_2003" + "Global MG94xREV":0.00123629096030503, + "Nucleotide GTR":0.00113802520351336 }, - "Node10":{ - "EBF site 10 (partition 1)":1, + "Node2":{ "EBF site 100 (partition 1)":1, - "EBF site 102 (partition 1)":1, + "EBF site 102 (partition 1)":0.2983773057734167, "EBF site 104 (partition 1)":1, - "EBF site 107 (partition 1)":1, - "EBF site 109 (partition 1)":1, "EBF site 11 (partition 1)":1, - "EBF site 110 (partition 1)":1, "EBF site 112 (partition 1)":1, "EBF site 113 (partition 1)":1, "EBF site 117 (partition 1)":1, @@ -2500,27 +1168,22 @@ "EBF site 136 (partition 1)":1, "EBF site 140 (partition 1)":1, "EBF site 142 (partition 1)":1, - "EBF site 145 (partition 1)":1.000000003356303, + "EBF site 145 (partition 1)":1, "EBF site 146 (partition 1)":1, - "EBF site 147 (partition 1)":1, - "EBF site 150 (partition 1)":1, "EBF site 152 (partition 1)":1, "EBF site 153 (partition 1)":1, "EBF site 154 (partition 1)":1, "EBF site 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(partition 1)":1, "EBF site 142 (partition 1)":1, - "EBF site 145 (partition 1)":159.4832746952417, + "EBF site 145 (partition 1)":1, "EBF site 146 (partition 1)":1, - "EBF site 147 (partition 1)":1, - "EBF site 150 (partition 1)":0.8001668156939907, "EBF site 152 (partition 1)":1, "EBF site 153 (partition 1)":1, - "EBF site 154 (partition 1)":39.92575073528594, + "EBF site 154 (partition 1)":1, "EBF site 155 (partition 1)":1, "EBF site 156 (partition 1)":1, "EBF site 157 (partition 1)":1, - "EBF site 16 (partition 1)":1, - "EBF site 167 (partition 1)":0.2385451274628346, - "EBF site 17 (partition 1)":1, + "EBF site 16 (partition 1)":0.9932935525732471, + "EBF site 167 (partition 1)":0.4553024703787611, "EBF site 170 (partition 1)":1, "EBF site 171 (partition 1)":1, "EBF site 172 (partition 1)":1, "EBF site 175 (partition 1)":1, - "EBF site 178 (partition 1)":0.2088079752385484, + "EBF site 178 (partition 1)":0.7349411890690492, "EBF site 181 (partition 1)":1, - "EBF site 191 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1)":1, - "EBF site 545 (partition 1)":1, - "EBF site 549 (partition 1)":1, - "EBF site 553 (partition 1)":1, - "EBF site 558 (partition 1)":0.8263997263369185, - "EBF site 560 (partition 1)":1, - "EBF site 564 (partition 1)":1, - "EBF site 58 (partition 1)":1, - "EBF site 59 (partition 1)":1, - "EBF site 60 (partition 1)":1, - "EBF site 61 (partition 1)":1, - "EBF site 62 (partition 1)":1, - "EBF site 64 (partition 1)":1, - "EBF site 66 (partition 1)":1, - "EBF site 68 (partition 1)":1, - "EBF site 69 (partition 1)":1, - "EBF site 70 (partition 1)":1, - "EBF site 73 (partition 1)":1, - "EBF site 77 (partition 1)":1, - "EBF site 78 (partition 1)":1, - "EBF site 79 (partition 1)":1, - "EBF site 8 (partition 1)":1, - "EBF site 81 (partition 1)":1, - "EBF site 84 (partition 1)":1, - "EBF site 86 (partition 1)":1, - "EBF site 89 (partition 1)":1, - "EBF site 9 (partition 1)":1, - "EBF site 99 (partition 1)":0.8274022600721103, - "Global MG94xREV":0.01081751233170446, - "Nucleotide GTR":0.007656566904909031, + "Global MG94xREV":0.007944352318354534, + "Nucleotide GTR":0.00775874788653539, "original name":"SWINE_ANHUI_1_2004" } }, "attributes":{ - "EBF site 10 (partition 1)":{ - "attribute type":"branch label", - "display order":12 - }, "EBF site 100 (partition 1)":{ "attribute type":"branch label", "display order":102 @@ -5411,22 +1955,10 @@ "attribute type":"branch label", "display order":106 }, - "EBF site 107 (partition 1)":{ - "attribute type":"branch label", - "display order":109 - }, - "EBF site 109 (partition 1)":{ - "attribute type":"branch label", - "display order":111 - }, "EBF site 11 (partition 1)":{ "attribute type":"branch label", "display order":13 }, - "EBF site 110 (partition 1)":{ - "attribute type":"branch label", - "display order":112 - }, "EBF site 112 (partition 1)":{ "attribute type":"branch label", "display order":114 @@ -5463,14 +1995,6 @@ "attribute type":"branch label", "display order":148 }, - "EBF site 147 (partition 1)":{ - "attribute type":"branch label", - "display order":149 - }, - "EBF site 150 (partition 1)":{ - "attribute type":"branch label", - "display order":152 - }, "EBF site 152 (partition 1)":{ "attribute type":"branch label", "display order":154 @@ -5503,10 +2027,6 @@ "attribute type":"branch label", "display order":169 }, - "EBF site 17 (partition 1)":{ - "attribute type":"branch label", - "display order":19 - }, "EBF site 170 (partition 1)":{ "attribute type":"branch label", "display order":172 @@ -5531,14 +2051,6 @@ "attribute type":"branch label", "display order":183 }, - "EBF site 191 (partition 1)":{ - "attribute type":"branch label", - "display order":193 - }, - "EBF site 195 (partition 1)":{ - "attribute type":"branch label", - "display order":197 - }, "EBF site 196 (partition 1)":{ "attribute type":"branch label", "display order":198 @@ -5567,62 +2079,22 @@ "attribute type":"branch label", "display order":23 }, - "EBF site 211 (partition 1)":{ - "attribute type":"branch label", - "display order":213 - }, "EBF site 213 (partition 1)":{ "attribute type":"branch label", "display order":215 }, - "EBF site 214 (partition 1)":{ - "attribute type":"branch label", - "display order":216 - }, "EBF site 217 (partition 1)":{ "attribute type":"branch label", "display order":219 }, - "EBF site 221 (partition 1)":{ - "attribute type":"branch label", - "display order":223 - }, - "EBF site 222 (partition 1)":{ - "attribute type":"branch label", - "display order":224 - }, - "EBF site 224 (partition 1)":{ - "attribute type":"branch label", - "display order":226 - }, - "EBF site 226 (partition 1)":{ - "attribute type":"branch label", - "display order":228 - }, "EBF site 228 (partition 1)":{ "attribute type":"branch label", "display order":230 }, - "EBF site 230 (partition 1)":{ - "attribute type":"branch label", - "display order":232 - }, - "EBF site 231 (partition 1)":{ - "attribute type":"branch label", - "display order":233 - }, - "EBF site 233 (partition 1)":{ - "attribute type":"branch label", - "display order":235 - }, "EBF site 237 (partition 1)":{ "attribute type":"branch label", "display order":239 }, - "EBF site 240 (partition 1)":{ - "attribute type":"branch label", - "display order":242 - }, "EBF site 241 (partition 1)":{ "attribute type":"branch label", "display order":243 @@ -5643,14 +2115,6 @@ "attribute type":"branch label", "display order":260 }, - "EBF site 265 (partition 1)":{ - "attribute type":"branch label", - "display order":267 - }, - "EBF site 271 (partition 1)":{ - "attribute type":"branch label", - "display order":273 - }, "EBF site 278 (partition 1)":{ "attribute type":"branch label", "display order":280 @@ -5663,18 +2127,10 @@ "attribute type":"branch label", "display order":30 }, - "EBF site 283 (partition 1)":{ - "attribute type":"branch label", - "display order":285 - }, "EBF site 288 (partition 1)":{ "attribute type":"branch label", "display order":290 }, - "EBF site 291 (partition 1)":{ - "attribute type":"branch label", - "display order":293 - }, "EBF site 298 (partition 1)":{ "attribute type":"branch label", "display order":300 @@ -5711,18 +2167,10 @@ "attribute type":"branch label", "display order":329 }, - "EBF site 328 (partition 1)":{ - "attribute type":"branch label", - "display order":330 - }, "EBF site 329 (partition 1)":{ "attribute type":"branch label", "display order":331 }, - "EBF site 33 (partition 1)":{ - "attribute type":"branch label", - "display order":35 - }, "EBF site 332 (partition 1)":{ "attribute type":"branch label", "display order":334 @@ -5731,14 +2179,6 @@ "attribute type":"branch label", "display order":338 }, - "EBF site 338 (partition 1)":{ - "attribute type":"branch label", - "display order":340 - }, - "EBF site 339 (partition 1)":{ - "attribute type":"branch label", - "display order":341 - }, "EBF site 341 (partition 1)":{ "attribute type":"branch label", "display order":343 @@ -5747,10 +2187,6 @@ "attribute type":"branch label", "display order":344 }, - "EBF site 344 (partition 1)":{ - "attribute type":"branch label", - "display order":346 - }, "EBF site 348 (partition 1)":{ "attribute type":"branch label", "display order":350 @@ -5767,10 +2203,6 @@ "attribute type":"branch label", "display order":356 }, - "EBF site 357 (partition 1)":{ - "attribute type":"branch label", - "display order":359 - }, "EBF site 361 (partition 1)":{ "attribute type":"branch label", "display order":363 @@ -5787,26 +2219,10 @@ "attribute type":"branch label", "display order":381 }, - "EBF site 384 (partition 1)":{ - "attribute type":"branch label", - "display order":386 - }, "EBF site 389 (partition 1)":{ "attribute type":"branch label", "display order":391 }, - "EBF site 39 (partition 1)":{ - "attribute type":"branch label", - "display order":41 - }, - "EBF site 403 (partition 1)":{ - "attribute type":"branch label", - "display order":405 - }, - "EBF site 408 (partition 1)":{ - "attribute type":"branch label", - "display order":410 - }, "EBF site 417 (partition 1)":{ "attribute type":"branch label", "display order":419 @@ -5815,10 +2231,6 @@ "attribute type":"branch label", "display order":426 }, - "EBF site 429 (partition 1)":{ - "attribute type":"branch label", - "display order":431 - }, "EBF site 431 (partition 1)":{ "attribute type":"branch label", "display order":433 @@ -5827,10 +2239,6 @@ "attribute type":"branch label", "display order":435 }, - "EBF site 440 (partition 1)":{ - "attribute type":"branch label", - "display order":442 - }, "EBF site 441 (partition 1)":{ "attribute type":"branch label", "display order":443 @@ -5843,10 +2251,6 @@ "attribute type":"branch label", "display order":47 }, - "EBF site 454 (partition 1)":{ - "attribute type":"branch label", - "display order":456 - }, "EBF site 466 (partition 1)":{ "attribute type":"branch label", "display order":468 @@ -5855,22 +2259,6 @@ "attribute type":"branch label", "display order":479 }, - "EBF site 478 (partition 1)":{ - "attribute type":"branch label", - "display order":480 - }, - "EBF site 479 (partition 1)":{ - "attribute type":"branch label", - "display order":481 - }, - "EBF site 481 (partition 1)":{ - "attribute type":"branch label", - "display order":483 - }, - "EBF site 485 (partition 1)":{ - "attribute type":"branch label", - "display order":487 - }, "EBF site 488 (partition 1)":{ "attribute type":"branch label", "display order":490 @@ -5879,10 +2267,6 @@ "attribute type":"branch label", "display order":491 }, - "EBF site 494 (partition 1)":{ - "attribute type":"branch label", - "display order":496 - }, "EBF site 499 (partition 1)":{ "attribute type":"branch label", "display order":501 @@ -5895,34 +2279,14 @@ "attribute type":"branch label", "display order":508 }, - "EBF site 507 (partition 1)":{ - "attribute type":"branch label", - "display order":509 - }, "EBF site 509 (partition 1)":{ "attribute type":"branch label", "display order":511 }, - "EBF site 51 (partition 1)":{ - "attribute type":"branch label", - "display order":53 - }, - "EBF site 513 (partition 1)":{ - "attribute type":"branch label", - "display order":515 - }, - "EBF site 514 (partition 1)":{ - "attribute type":"branch label", - "display order":516 - }, "EBF site 515 (partition 1)":{ "attribute type":"branch label", "display order":517 }, - "EBF site 519 (partition 1)":{ - "attribute type":"branch label", - "display order":521 - }, "EBF site 52 (partition 1)":{ "attribute type":"branch label", "display order":54 @@ -5943,18 +2307,6 @@ "attribute type":"branch label", "display order":541 }, - "EBF site 54 (partition 1)":{ - "attribute type":"branch label", - "display order":56 - }, - "EBF site 540 (partition 1)":{ - "attribute type":"branch label", - "display order":542 - }, - "EBF site 544 (partition 1)":{ - "attribute type":"branch label", - "display order":546 - }, "EBF site 545 (partition 1)":{ "attribute type":"branch label", "display order":547 @@ -5991,22 +2343,6 @@ "attribute type":"branch label", "display order":62 }, - "EBF site 61 (partition 1)":{ - "attribute type":"branch label", - "display order":63 - }, - "EBF site 62 (partition 1)":{ - "attribute type":"branch label", - "display order":64 - }, - "EBF site 64 (partition 1)":{ - "attribute type":"branch label", - "display order":66 - }, - "EBF site 66 (partition 1)":{ - "attribute type":"branch label", - "display order":68 - }, "EBF site 68 (partition 1)":{ "attribute type":"branch label", "display order":70 @@ -6015,18 +2351,6 @@ "attribute type":"branch label", "display order":71 }, - "EBF site 70 (partition 1)":{ - "attribute type":"branch label", - "display order":72 - }, - "EBF site 73 (partition 1)":{ - "attribute type":"branch label", - "display order":75 - }, - "EBF site 77 (partition 1)":{ - "attribute type":"branch label", - "display order":79 - }, "EBF site 78 (partition 1)":{ "attribute type":"branch label", "display order":80 @@ -6039,10 +2363,6 @@ "attribute type":"branch label", "display order":10 }, - "EBF site 81 (partition 1)":{ - "attribute type":"branch label", - "display order":83 - }, "EBF site 84 (partition 1)":{ "attribute type":"branch label", "display order":86 @@ -6055,14 +2375,6 @@ "attribute type":"branch label", "display order":91 }, - "EBF site 9 (partition 1)":{ - "attribute type":"branch label", - "display order":11 - }, - "EBF site 99 (partition 1)":{ - "attribute type":"branch label", - "display order":101 - }, "Global MG94xREV":{ "attribute type":"branch length", "display order":1 @@ -6087,153 +2399,137 @@ }, "fits":{ "Global MG94xREV":{ - "AIC-c":7226.087178885974, + "AIC-c":6011.13695012892, "Equilibrium frequencies": [ -[0.0485984009412611], - [0.02956900357719973], - [0.03108082672838122], - [0.03449710399341214], - [0.02053762541952889], - [0.01249582512460089], - [0.01313471975854296], - [0.01457843439605254], - [0.02308459048229354], - [0.01404548967308914], - [0.01476361655896873], - [0.01638637286596178], - [0.03046946697462319], - [0.01853871239625653], - [0.01948657168142254], - [0.0216284558851606], - [0.02112660536120122], - [0.01285418156565452], - [0.01351139847963371], - [0.01499651610047861], - [0.008928077856285582], - [0.005432161572334556], - [0.005709900644757894], - [0.006337509553901212], - [0.01003528971321133], - [0.006105828827307119], - [0.006418011595122538], - [0.007123453161742795], - [0.01324562931848419], - [0.008059114150152886], - [0.008471165754069981], - [0.009402281622603544], - [0.03932718962871962], - [0.02392806734975356], - [0.02515147706283166], - [0.0279160244805243], - [0.01661962273972026], - [0.01011197230206122], - [0.01062898376612524], - [0.01179727815893297], - [0.01868069833194261], - [0.0113660043356041], - [0.01194713276105585], - [0.01326031269640911], - [0.02465674759639369], - [0.01500204623524711], - [0.01576908056409512], - [0.01750235335932507], - [0.02110645419006403], - [0.02462414883970813], - [0.01465982608978509], - [0.008919561995751803], - [0.009375607133978042], - [0.01040613549725428], - [0.01002571776178019], - [0.01053831914788704], - [0.0116966480569341], - [0.02174920799128454], - [0.01323299525169244], - [0.01390958039696969], - [0.01543846454447198] +[0.0487448731499957], + [0.02916309663834602], + [0.03100171502919514], + [0.03392179881163448], + [0.02040080210426937], + [0.01220539771302355], + [0.01297489997065711], + [0.01419701929364967], + [0.02306796533539959], + [0.0138011088931582], + [0.01467121445635504], + [0.01605311140503505], + [0.03067687144383888], + [0.01835336741416609], + [0.01951047494908151], + [0.02134818687672324], + [0.02126077850204813], + [0.01271990463804815], + [0.01352184453103644], + [0.01479548113102975], + [0.008898103672735205], + [0.005323560008197935], + [0.005659189501089015], + [0.006192234446128948], + [0.010061425331433], + [0.006019552422614294], + [0.006399061496227086], + [0.007001795754005012], + [0.01338015932252603], + [0.008005085543223482], + [0.008509774660521757], + [0.009311319186526256], + [0.04013232935583105], + [0.02401038147590574], + [0.02552414146855538], + [0.02792828690027832], + [0.01679626299677307], + [0.01004887302569606], + [0.0106824148947738], + [0.01168860266413242], + [0.01899217543474583], + [0.01136264414662781], + [0.01207901411089265], + [0.0132167490129733], + [0.02525669324448205], + [0.01511058165209229], + [0.0160632443156804], + [0.01757625800461362], + [0.02112670632168297], + [0.02457406668036405], + [0.01477901198657192], + [0.008841991514828857], + [0.009399444257673735], + [0.01028478768834936], + [0.009997977173519282], + [0.01062831025955897], + [0.01162940185705429], + [0.02222333457585675], + [0.01329578296096281], + [0.01413402971424556], + [0.01546532867335853] ], - "Log Likelihood":-3569.784907463222, + "Log Likelihood":-2978.298667783946, "Rate Distributions":{ "non-synonymous/synonymous rate ratio for *test*": [ -[0.248895715005128, 1] +[0.2932353608697501, 1] ] }, "display order":1, - "estimated parameters":43 + "estimated parameters":27 }, "Nucleotide GTR":{ - "AIC-c":7431.204675852382, + "AIC-c":6152.529196194525, "Equilibrium frequencies": [ -[0.3476574973769445], - [0.1861228958532913], - [0.2296428082660462], - [0.2365767985037179] +[0.3478363400542389], + [0.184883858035609], + [0.2307510906732697], + [0.2365287112368824] ], - "Log Likelihood":-3679.541894127126, + "Log Likelihood":-3056.215005465311, "Rate Distributions":{ - "Substitution rate from nucleotide A to nucleotide C":0.2089484190839437, + "Substitution rate from nucleotide A to nucleotide C":0.1810796022573985, "Substitution rate from nucleotide A to nucleotide G":1, - "Substitution rate from nucleotide A to nucleotide T":0.1069376934774225, - "Substitution rate from nucleotide C to nucleotide G":0.01756475048192434, - "Substitution rate from nucleotide C to nucleotide T":1.483513244796427, - "Substitution rate from nucleotide G to nucleotide T":0.1186889750817524 + "Substitution rate from nucleotide A to nucleotide T":0.08708610799393901, + "Substitution rate from nucleotide C to nucleotide G":0.02931879134098465, + "Substitution rate from nucleotide C to nucleotide T":1.419136867291551, + "Substitution rate from nucleotide G to nucleotide T":0.1065442350926398 }, "display order":0, - "estimated parameters":36 + "estimated parameters":20 } }, "input":{ - "file name":"/tmp/tmpu23i1b/job_working_directory/000/3/working/meme_input.fa", - "number of sequences":13, + "file name":"/tmp/tmpdqyv1aux/job_working_directory/000/3/working/./meme_input.fa", + "number of sequences":5, "number of sites":566, "partition count":1, "trees":{ - "0":"(((((CHICKEN_HEBEI_326_2005:0.02100885319673648,(SWINE_ANHUI_1_2004:0.007702393698306516)Node7:0.002095219592954275)Node5:0.003887237703073042)Node4:0.003404921392531202,(((CHICKEN_HONGKONG_915_97:-1,(GOOSE_HONGKONG_W355_97:-1)Node13:0.002899766890966483)Node11:0.001306376767766534,HONGKONG_1_97_98:0.003844928589233716)Node10:0.000182535836694054,HONGKONG_1_538_97:-1)Node9:0.02096173714686362)Node3:0.003130608143291779,(((GOOSE_SHANTOU_2216_2005:0.006207842095177651)Node19:0.002530613798219486,PEREGRINEFALCON_HK_D0028_2004:0.003608296348267232)Node18:0.003288900909856382,CK_HK_WF157_2003:0.00663129750258774)Node17:0.004655295319725731)Node2:0.0116808817874948,(((HUMAN_VIETNAM_CL105_2005:0.006521522005742001)Node25:0.001967887030302483,HUMAN_VIETNAM_3062_2004:0.001641397323851184)Node24:0.0003125512332168847,MALLARD_VIETNAM_16_2003:0.003244216605281072)Node23:0.0004125980823087554,CHICKEN_CK_160_2005:0.006168335080088849)" + "0":"(((((CHICKEN_HEBEI_326_2005:0.02100885319673648,(SWINE_ANHUI_1_2004:0.007702393698306516)Node7:0.002095219592954275)Node5:0.003887237703073042)Node4:-1)Node3:0.003130608143291779,(CK_HK_WF157_2003:0.00663129750258774)Node9:0.004655295319725731)Node2:0.0116808817874948,(MALLARD_VIETNAM_16_2003:0.003244216605281072)Node11:0.0004125980823087554,CHICKEN_CK_160_2005:0.006168335080088849)" } }, "tested":{ "0":{ "CHICKEN_CK_160_2005":"test", "CHICKEN_HEBEI_326_2005":"test", - "CHICKEN_HONGKONG_915_97":"test", "CK_HK_WF157_2003":"test", - "GOOSE_HONGKONG_W355_97":"test", - "GOOSE_SHANTOU_2216_2005":"test", - "HONGKONG_1_538_97":"test", - "HONGKONG_1_97_98":"test", - "HUMAN_VIETNAM_3062_2004":"test", - "HUMAN_VIETNAM_CL105_2005":"test", "MALLARD_VIETNAM_16_2003":"test", - "Node10":"test", "Node11":"test", - "Node13":"test", - "Node17":"test", - "Node18":"test", - "Node19":"test", "Node2":"test", - "Node23":"test", - "Node24":"test", - "Node25":"test", "Node3":"test", "Node4":"test", "Node5":"test", "Node7":"test", "Node9":"test", - "PEREGRINEFALCON_HK_D0028_2004":"test", "SWINE_ANHUI_1_2004":"test" } }, "timers":{ "MEME analysis":{ "order":2, - "timer":249 + "timer":437 }, "Model fitting":{ "order":1, - "timer":2 + "timer":4 }, "Total time":{ "order":0, - "timer":252 + "timer":442 } } } \ No newline at end of file