diff hyphy_gard.xml @ 34:5b777002c2de draft default tip

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit e7a89841d59689e87db592e112f9c8fb5331d954

--- a/hyphy_gard.xml	Thu Aug 18 13:55:30 2022 +0000
+++ b/hyphy_gard.xml	Thu Mar 02 15:16:52 2023 +0000
@@ -1,5 +1,4 @@
-<?xml version="1.0"?>
-<tool id="hyphy_gard" name="HyPhy-GARD" version="@TOOL_VERSION@+galaxy1" profile="19.09">
+<tool id="hyphy_gard" name="HyPhy-GARD" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" profile="@PROFILE@">
     <description>Genetic Algorithm for Recombination Detection</description>
     <macros>
         <import>macros.xml</import>
@@ -35,7 +34,7 @@
             </param>
             <when value="nucleotide"/>
             <when value="amino-acid">
-                <expand macro="substitution" />
+                <expand macro="substitution" argument="--model" />
             </when>
             <when value="codon">
                 <expand macro="gencode" />
@@ -58,7 +57,7 @@
     </inputs>
     <outputs>
         <data name="gard_output" format="nex" />
-        <data name="translated" format="hyphy_results.json" />
+        <data name="translated" format="hyphy_results.json" label="${tool.name} on ${on_string}: Translated" />
     </outputs>
     <tests>
         <test>