comparison hyphy_relax.xml @ 1:1da578d6a253 draft

"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 533e8f97b4df382944ac8a31d98e04c9efeb6798"

0:551616a65f8f

            <param name="input_nhx" ftype="nhx" value="relax-in1.nhx"/>
            <output name="relax_output" file="relax-out1.json" compare="sim_size"/>
        </test>
    </tests>
    <help><![CDATA[
RELAX (Detect relaxed selection in a codon-based phylogenetic framework)
    ]]></help>
    <expand macro="citations">
        <citation type="doi">10.1093/molbev/msu400</citation>
    </expand>
</tool>

1:1da578d6a253

            <param name="input_nhx" ftype="nhx" value="relax-in1.nhx"/>
            <output name="relax_output" file="relax-out1.json" compare="sim_size"/>
        </test>
    </tests>
    <help><![CDATA[
RELAX is a hypothesis testing framework that asks whether the strength of natural selection has been relaxed or intensified along a specified set of test branches. RELAX is therefore not a suitable method for explicitly testing for positive selection. Instead, RELAX is most useful for identifying trends and/or shifts in the stringency of natural selection on a given gene.

See the online documentation_ for more information.

.. _documentation: http://hyphy.org/methods/selection-methods/#relax
    ]]></help>
    <expand macro="citations">
        <citation type="doi">10.1093/molbev/msu400</citation>
    </expand>
</tool>