comparison hyphy_slac.xml @ 35:2753a5c7597a draft default tip

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit e7a89841d59689e87db592e112f9c8fb5331d954

34:1467fb7e162d

<?xml version="1.0"?>
<tool id="hyphy_slac" name="HyPhy-SLAC" version="@TOOL_VERSION@+galaxy1" profile="19.09">
    <description>Single Likelihood Ancestor Counting</description>
    <macros>
        <import>macros.xml</import>
    </macros>
    <expand macro="bio_tools"/>

    </outputs>
    <tests>
        <test>
            <param name="input_file" ftype="fasta" value="absrel-in1.fa"/>
            <param name="input_nhx" ftype="nhx" value="absrel-in1.nhx"/>
            <output name="slac_output" file="slac-out1.json" compare="sim_size"/>
        </test>
    </tests>
    <help><![CDATA[
SLAC : Single Likelihood Ancestor Counting
==========================================

35:2753a5c7597a

<tool id="hyphy_slac" name="HyPhy-SLAC" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" profile="@PROFILE@">
    <description>Single Likelihood Ancestor Counting</description>
    <macros>
        <import>macros.xml</import>
    </macros>
    <expand macro="bio_tools"/>

    </outputs>
    <tests>
        <test>
            <param name="input_file" ftype="fasta" value="absrel-in1.fa"/>
            <param name="input_nhx" ftype="nhx" value="absrel-in1.nhx"/>
            <output name="slac_output">
                <assert_contents>
                    <has_size value="280000" delta="8000"/>
                    <has_text text="tested"/>
                    <has_text text="sample-median"/>
                    <has_text text="sample-97.5"/>
                </assert_contents>
            </output>
        </test>
    </tests>
    <help><![CDATA[
SLAC : Single Likelihood Ancestor Counting
==========================================