Mercurial > repos > iuc > hyphy_sm19
annotate test-data/gard-out1.json @ 11:056a5b14721d draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 16da4cfb8e771ea5e7dc2772c4fe2c160535838b"
author | iuc |
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date | Fri, 01 May 2020 13:28:47 -0400 |
parents | ae7c42d49717 |
children | 36e40d93e8a3 |
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ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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1 { |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
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2 "analysis":{ |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
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3 "authors":"Sergei L Kosakovsky Pond", |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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4 "citation":"**Automated Phylogenetic Detection of Recombination Using a Genetic Algorithm**, _Mol Biol Evol 23(10), 1891–1901", |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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5 "contact":"spond@temple.edu", |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
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6 "info":"GARD : Genetic Algorithms for Recombination Detection. Implements a heuristic\n approach to screening alignments of sequences for recombination, by using the CHC genetic algorithm to search for phylogenetic\n incongruence among different partitions of the data. The number of partitions is determined using a step-up procedure, while the\n placement of breakpoints is searched for with the GA. The best fitting model (based on c-AIC) is returned; and additional post-hoc\n tests run to distinguish topological incongruence from rate-variation.", |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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7 "requirements":"A sequence alignment.", |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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8 "version":"0.1" |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
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9 }, |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
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10 "baselineScore":8884.998566352424, |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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11 "breakpointData":{ |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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12 "0":{ |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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13 "bps": [ |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
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14 [1, 461] |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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15 ], |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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16 "tree":"(((((((TREESPARROW_HENAN_1_2004:0.01973996359641645,TREESPARROW_HENAN_2_2004:0)Node6:0.006601594605919903,CHICKEN_HEBEI_326_2005:0.02877904543700591)Node5:0.002960697265622527,SWINE_ANHUI_2004:0.01220336915594569)Node4:0.004301817483024902,((DUCK_GUANGZHOU_20_2005:0.006496379151101181,(GOOSE_SHANTOU_2216_2005:0.008666763019733412,PEREGRINEFALCON_HK_D0028_2004:0.006494907750172948)Node14:0)Node12:0.006529386248252737,CK_HK_WF157_2003:0.008749819170042668)Node11:0.006517868346508392)Node3:0.004369843971142481,((TREESPARROW_HENAN_3_2004:0.004310725480928182,((CHICKEN_HONGKONG_915_97:0,(HONGKONG_97_98:0.007234718327388172,HONGKONG_538_97:0)Node24:0)Node22:0,(GOOSE_HONGKONG_W355_97:0,DUCK_HONGKONG_Y283_97:0)Node27:0.002160209380619512)Node21:0.02651640051975179)Node19:0.002209468499615626,TREESPARROW_HENAN_4_2004:0.008707376458939551)Node18:0)Node2:0.01527162191938894,MALLARD_VIETNAM_16_2003:0.00216300836609909)Node1:0,HUMAN_VIETNAM_CL105_2005:0.01089634139979296,(((DUCK_VIETNAM_376_2005:0.002165747961920766,CHICKEN_THAILAND_KANCHANABURI_CK_160_2005:0.01092964139649115)Node35:0.002165571630784742,VIETNAM_3062_2004:0)Node34:0.002160659783816526,DUCK_VIETNAM_272_2005:0.006501625005083654)Node33:0)" |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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17 }, |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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18 "1":{ |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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19 "bps": [ |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
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20 [462, 650] |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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21 ], |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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22 "tree":"((((((TREESPARROW_HENAN_1_2004:0,TREESPARROW_HENAN_3_2004:0.01064277225673711)Node5:0.00531987705161906,TREESPARROW_HENAN_2_2004:0)Node4:0.005231591103466107,CHICKEN_HEBEI_326_2005:0.05043188754547531)Node3:0.005435427857192481,CK_HK_WF157_2003:0)Node2:0.005367407450692448,((TREESPARROW_HENAN_4_2004:0.005403333058615208,(((CHICKEN_HONGKONG_915_97:0,(GOOSE_HONGKONG_W355_97:0,DUCK_HONGKONG_Y283_97:0)Node18:0.005303893633648769)Node16:0,HONGKONG_97_98:0)Node15:0,HONGKONG_538_97:0)Node14:0.0160450339521957)Node12:0.01065583332597595,((DUCK_GUANGZHOU_20_2005:0.02156617952480121,GOOSE_SHANTOU_2216_2005:0.005315754078746889)Node24:0,PEREGRINEFALCON_HK_D0028_2004:0.005310132566451705)Node23:0)Node11:0.005324661683629481)Node1:0.01075596871747344,(SWINE_ANHUI_2004:0.01612941661930485,DUCK_VIETNAM_272_2005:0.005332918418299072)Node28:0.005343017103483476,((HUMAN_VIETNAM_CL105_2005:0.01615610619083483,DUCK_VIETNAM_376_2005:0.01622595235090508)Node32:0.005403715853761346,(VIETNAM_3062_2004:0,(MALLARD_VIETNAM_16_2003:0.01066500623689393,CHICKEN_THAILAND_KANCHANABURI_CK_160_2005:0)Node37:0.005316372444723995)Node35:0)Node31:0)" |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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23 }, |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
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24 "2":{ |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
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25 "bps": [ |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
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26 [651, 1166] |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
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27 ], |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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28 "tree":"(((((((TREESPARROW_HENAN_1_2004:0.001954008187578416,TREESPARROW_HENAN_3_2004:0.003896316686452931)Node6:0.001938506890703636,TREESPARROW_HENAN_4_2004:0)Node5:0.005890390504717593,((CHICKEN_HEBEI_326_2005:0.0118071209154035,(SWINE_ANHUI_2004:0,TREESPARROW_HENAN_2_2004:0.001939618450410721)Node13:0.01383276182388132)Node11:0.009974147725569997,((CHICKEN_HONGKONG_915_97:0,GOOSE_HONGKONG_W355_97:0)Node17:0.001941847153562197,((DUCK_HONGKONG_Y283_97:0,HONGKONG_538_97:0)Node21:0,HONGKONG_97_98:0.005840445012127324)Node20:0.001942715072940801)Node16:0.01987446960589405)Node10:0.005913850464875198)Node4:0.005886750382502456,(((DUCK_GUANGZHOU_20_2005:0.003893604042162395,GOOSE_SHANTOU_2216_2005:0.003905435534305824)Node27:0.001941929040845811,PEREGRINEFALCON_HK_D0028_2004:0.003899037680959845)Node26:0.001951590047476092,CK_HK_WF157_2003:0.005864286435734769)Node25:0.001925781157666145)Node3:0.009803928769016717,DUCK_VIETNAM_272_2005:0.01580156952635168)Node2:0,CHICKEN_THAILAND_KANCHANABURI_CK_160_2005:0.003890598353658968)Node1:0,((HUMAN_VIETNAM_CL105_2005:0.003905371265795895,DUCK_VIETNAM_376_2005:0.0137665342243657)Node35:0.001932867193851192,MALLARD_VIETNAM_16_2003:0.003887459835724038)Node34:0,VIETNAM_3062_2004:0.00194102772512571)" |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
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29 }, |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
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30 "3":{ |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
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31 "bps": [ |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
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32 [1167, 1698] |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
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33 ], |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
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34 "tree":"(TREESPARROW_HENAN_1_2004:0,((TREESPARROW_HENAN_3_2004:0.005713571370335148,TREESPARROW_HENAN_4_2004:0)Node3:0.00189607429178233,(CHICKEN_HEBEI_326_2005:0.005712316903324198,(SWINE_ANHUI_2004:0.005701998731046575,(((CHICKEN_HONGKONG_915_97:0,HONGKONG_97_98:0)Node12:0.001895621658683188,(GOOSE_HONGKONG_W355_97:0,HONGKONG_538_97:0)Node15:0)Node11:0.01534803500036186,((DUCK_HONGKONG_Y283_97:0.0001941011375241317,(((HUMAN_VIETNAM_CL105_2005:0.001928158212296621,DUCK_VIETNAM_376_2005:0.003824815472812549)Node23:0.001900556734363341,(VIETNAM_3062_2004:0.001945118440015516,MALLARD_VIETNAM_16_2003:0)Node26:0)Node22:0,(CHICKEN_THAILAND_KANCHANABURI_CK_160_2005:0.00380825293990655,DUCK_VIETNAM_272_2005:0.005749159769097136)Node29:0.001884324589239026)Node21:0.006136201619836659)Node19:0.006956231732180768,(((DUCK_GUANGZHOU_20_2005:0.003782134609270667,GOOSE_SHANTOU_2216_2005:0.005745814969410696)Node34:0.005728903718080784,PEREGRINEFALCON_HK_D0028_2004:0)Node33:0.001883474579815808,CK_HK_WF157_2003:0.005783922057126199)Node32:0.003686703559509533)Node18:0.002359028413665987)Node10:0.003781653021946557)Node8:0.003836413220384994)Node6:0.001894177236914572)Node2:0,TREESPARROW_HENAN_2_2004:0.00767492225272676)" |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
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35 } |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
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36 }, |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
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37 "improvements":{ |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
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38 "0":{ |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
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39 "breakpoints": [ |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
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40 [696] |
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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
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41 ], |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
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42 "deltaAICc":121.2176698921212 |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
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43 }, |
ae7c42d49717
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44 "1":{ |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
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45 "breakpoints": [ |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
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46 [692], |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
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47 [1166] |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
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48 ], |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
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49 "deltaAICc":51.31089620615057 |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
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50 }, |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
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51 "2":{ |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
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52 "breakpoints": [ |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
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53 [461], |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
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54 [650], |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
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55 [1166] |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
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56 ], |
ae7c42d49717
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iuc
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57 "deltaAICc":0.1679528998429305 |
ae7c42d49717
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iuc
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58 } |
ae7c42d49717
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iuc
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59 }, |
ae7c42d49717
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iuc
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60 "input":{ |
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iuc
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61 "file name":"/Users/ryanvelazquez/Documents/galaxy_items/tools-iuc/tools/hyphy/./test-data/gard-in1.fa", |
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iuc
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62 "number of sequences":21, |
ae7c42d49717
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iuc
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63 "number of sites":1698, |
ae7c42d49717
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iuc
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64 "partition count":1 |
ae7c42d49717
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iuc
parents:
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65 }, |
ae7c42d49717
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iuc
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66 "potentialBreakpoints":244, |
ae7c42d49717
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iuc
parents:
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67 "singleTreeAICc":8952.770360670584, |
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iuc
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68 "siteBreakPointSupport":{ |
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iuc
parents:
diff
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69 "1005":3.828454313051127e-38, |
ae7c42d49717
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iuc
parents:
diff
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70 "1006":3.079286891225441e-38, |
ae7c42d49717
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iuc
parents:
diff
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71 "101":1.367441431357884e-42, |
ae7c42d49717
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iuc
parents:
diff
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72 "1013":1.999228647805731e-38, |
ae7c42d49717
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iuc
parents:
diff
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73 "1015":5.581552407151915e-37, |
ae7c42d49717
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iuc
parents:
diff
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74 "1016":6.637544467285419e-30, |
ae7c42d49717
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iuc
parents:
diff
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75 "1020":8.283127276807708e-36, |
ae7c42d49717
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iuc
parents:
diff
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76 "1021":5.149224738126319e-36, |
ae7c42d49717
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iuc
parents:
diff
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77 "1023":2.572721275288951e-33, |
ae7c42d49717
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iuc
parents:
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78 "1031":1.729227457250037e-39, |
ae7c42d49717
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iuc
parents:
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79 "1041":4.668316272061274e-41, |
ae7c42d49717
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iuc
parents:
diff
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80 "1052":7.068163653642667e-45, |
ae7c42d49717
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iuc
parents:
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81 "1058":4.410408926058965e-40, |
ae7c42d49717
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iuc
parents:
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82 "1061":3.620416399436108e-31, |
ae7c42d49717
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iuc
parents:
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83 "1070":1.30023862441172e-32, |
ae7c42d49717
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iuc
parents:
diff
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84 "1073":2.392244771912456e-29, |
ae7c42d49717
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iuc
parents:
diff
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85 "108":1.088323481504585e-09, |
ae7c42d49717
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iuc
parents:
diff
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86 "1082":1.781042369034824e-32, |
ae7c42d49717
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iuc
parents:
diff
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87 "1085":1.072215721126058e-30, |
ae7c42d49717
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iuc
parents:
diff
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88 "1106":8.711808244586844e-32, |
ae7c42d49717
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iuc
parents:
diff
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89 "1124":2.066632617058007e-32, |
ae7c42d49717
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iuc
parents:
diff
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90 "1130":2.365201133574919e-32, |
ae7c42d49717
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iuc
parents:
diff
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91 "1136":1.180024224431614e-32, |
ae7c42d49717
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iuc
parents:
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92 "1149":2.0594328664778e-30, |
ae7c42d49717
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iuc
parents:
diff
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93 "116":3.062613098803733e-06, |
ae7c42d49717
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iuc
parents:
diff
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94 "1166":1.382998480016903e-28, |
ae7c42d49717
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iuc
parents:
diff
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95 "1206":4.271112529885021e-30, |
ae7c42d49717
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iuc
parents:
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96 "1223":2.439400027544238e-30, |
ae7c42d49717
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iuc
parents:
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97 "1250":2.1846050762587e-31, |
ae7c42d49717
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iuc
parents:
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98 "1271":1.963370249731928e-32, |
ae7c42d49717
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iuc
parents:
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99 "1286":1.143587697307953e-32, |
ae7c42d49717
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iuc
parents:
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100 "1292":1.940620880105886e-32, |
ae7c42d49717
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iuc
parents:
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101 "1298":1.19984441620646e-32, |
ae7c42d49717
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iuc
parents:
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102 "1319":5.201055420999954e-33, |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
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103 "1322":1.490898155414118e-32, |
ae7c42d49717
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iuc
parents:
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104 "1334":6.386384600277327e-33, |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
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105 "134":7.744769428033727e-17, |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
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106 "1361":2.822486839844269e-33, |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
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107 "1384":1.557822413676087e-33, |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
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108 "1397":1.068642031138833e-35, |
ae7c42d49717
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iuc
parents:
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109 "1412":6.831611952947673e-38, |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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110 "1418":1.522690852126543e-39, |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
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111 "1430":7.96352395927298e-40, |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
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112 "1433":1.156793517215151e-37, |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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113 "1436":5.651778976453802e-38, |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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114 "144":8.552230281908163e-07, |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
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115 "1442":2.016530452321108e-37, |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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116 "1454":2.386567702095966e-36, |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
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117 "1463":9.043007916183422e-39, |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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118 "1465":7.669880260535686e-39, |
ae7c42d49717
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iuc
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119 "1473":3.675784601460829e-36, |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
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120 "1481":2.661546849207671e-37, |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
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121 "149":1.304259029589306e-05, |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
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122 "1495":4.622941797307467e-44, |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
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123 "1496":4.226996151791482e-44, |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
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124 "1499":2.730615034063184e-44, |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
diff
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125 "151":1.790975065283929e-08, |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
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126 "1515":4.749012537570416e-45, |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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127 "1516":1.058313486583168e-45, |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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128 "1519":3.729412022561233e-46, |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
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129 "1520":2.407045351616036e-46, |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
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130 "1521":1.689577693820857e-46, |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
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131 "1523":5.07686612591507e-46, |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
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132 "1524":1.741238756038766e-46, |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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133 "1526":3.855324589536673e-46, |
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iuc
parents:
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134 "1537":2.062102436942228e-46, |
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iuc
parents:
diff
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135 "1538":3.417841619348906e-47, |
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iuc
parents:
diff
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136 "1539":3.047730711305713e-47, |
ae7c42d49717
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iuc
parents:
diff
changeset
|
137 "1544":1.7639941893744e-47, |
ae7c42d49717
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iuc
parents:
diff
changeset
|
138 "155":1.315748190900565e-29, |
ae7c42d49717
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iuc
parents:
diff
changeset
|
139 "1556":1.89572005098281e-47, |
ae7c42d49717
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iuc
parents:
diff
changeset
|
140 "1580":5.505818788734445e-49, |
ae7c42d49717
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iuc
parents:
diff
changeset
|
141 "1585":1.614020745294316e-49, |
ae7c42d49717
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iuc
parents:
diff
changeset
|
142 "159":2.814745521856487e-30, |
ae7c42d49717
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iuc
parents:
diff
changeset
|
143 "161":5.278607654454491e-08, |
ae7c42d49717
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iuc
parents:
diff
changeset
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144 "1610":6.983674612335563e-50, |
ae7c42d49717
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iuc
parents:
diff
changeset
|
145 "1613":1.219959907173526e-49, |
ae7c42d49717
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iuc
parents:
diff
changeset
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146 "1616":1.379005387331829e-49, |
ae7c42d49717
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iuc
parents:
diff
changeset
|
147 "1618":1.403866743396411e-51, |
ae7c42d49717
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iuc
parents:
diff
changeset
|
148 "1619":6.05913881499244e-52, |
ae7c42d49717
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iuc
parents:
diff
changeset
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149 "1631":1.563107434100785e-52, |
ae7c42d49717
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iuc
parents:
diff
changeset
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150 "1632":5.045949522041951e-52, |
ae7c42d49717
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iuc
parents:
diff
changeset
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151 "1644":1.457045566204417e-52, |
ae7c42d49717
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iuc
parents:
diff
changeset
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152 "1646":1.817307863422175e-52, |
ae7c42d49717
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iuc
parents:
diff
changeset
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153 "1658":2.336582715408929e-53, |
ae7c42d49717
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iuc
parents:
diff
changeset
|
154 "173":3.057688318766887e-09, |
ae7c42d49717
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iuc
parents:
diff
changeset
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155 "174":3.878560193985558e-09, |
ae7c42d49717
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iuc
parents:
diff
changeset
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156 "176":8.37052095471109e-08, |
ae7c42d49717
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iuc
parents:
diff
changeset
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157 "177":1.79882740520206e-07, |
ae7c42d49717
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iuc
parents:
diff
changeset
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158 "178":4.189275930585918e-07, |
ae7c42d49717
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iuc
parents:
diff
changeset
|
159 "180":3.648108711445327e-07, |
ae7c42d49717
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iuc
parents:
diff
changeset
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160 "185":8.602578155282706e-07, |
ae7c42d49717
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iuc
parents:
diff
changeset
|
161 "191":2.146033440200939e-05, |
ae7c42d49717
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iuc
parents:
diff
changeset
|
162 "197":1.254742955877914e-07, |
ae7c42d49717
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iuc
parents:
diff
changeset
|
163 "203":1.782085063210574e-09, |
ae7c42d49717
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iuc
parents:
diff
changeset
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164 "205":3.9041258553037e-08, |
ae7c42d49717
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iuc
parents:
diff
changeset
|
165 "206":6.68882932678853e-21, |
ae7c42d49717
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iuc
parents:
diff
changeset
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166 "209":6.086107365200133e-07, |
ae7c42d49717
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iuc
parents:
diff
changeset
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167 "218":3.339578115382376e-06, |
ae7c42d49717
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iuc
parents:
diff
changeset
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168 "230":4.417475117693213e-07, |
ae7c42d49717
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iuc
parents:
diff
changeset
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169 "233":5.355261458449197e-05, |
ae7c42d49717
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iuc
parents:
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changeset
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170 "236":0.007922604577960988, |
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iuc
parents:
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changeset
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171 "239":0.001674452816751232, |
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iuc
parents:
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changeset
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172 "242":0.003084865524315277, |
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iuc
parents:
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changeset
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173 "251":0.001911517032820398, |
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iuc
parents:
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changeset
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174 "257":0.001206425464437376, |
ae7c42d49717
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iuc
parents:
diff
changeset
|
175 "266":0.0006256067585931275, |
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iuc
parents:
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changeset
|
176 "272":0.0004205386287599137, |
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iuc
parents:
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changeset
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177 "295":0.0006020604873750697, |
ae7c42d49717
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iuc
parents:
diff
changeset
|
178 "298":7.88207661427839e-10, |
ae7c42d49717
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iuc
parents:
diff
changeset
|
179 "303":1.196432870877656e-11, |
ae7c42d49717
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iuc
parents:
diff
changeset
|
180 "304":4.034129303399593e-10, |
ae7c42d49717
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iuc
parents:
diff
changeset
|
181 "310":1.00120863585874e-18, |
ae7c42d49717
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iuc
parents:
diff
changeset
|
182 "320":9.255079503229926e-08, |
ae7c42d49717
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iuc
parents:
diff
changeset
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183 "326":1.316695923941227e-11, |
ae7c42d49717
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iuc
parents:
diff
changeset
|
184 "327":9.749462853855344e-30, |
ae7c42d49717
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iuc
parents:
diff
changeset
|
185 "328":5.468914334726157e-06, |
ae7c42d49717
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iuc
parents:
diff
changeset
|
186 "335":5.399829244004923e-09, |
ae7c42d49717
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iuc
parents:
diff
changeset
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187 "336":1.259324706217958e-11, |
ae7c42d49717
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iuc
parents:
diff
changeset
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188 "338":4.933684745749596e-07, |
ae7c42d49717
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iuc
parents:
diff
changeset
|
189 "348":4.415481383174255e-09, |
ae7c42d49717
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iuc
parents:
diff
changeset
|
190 "383":1.208370214471027e-18, |
ae7c42d49717
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iuc
parents:
diff
changeset
|
191 "391":4.182822911348255e-18, |
ae7c42d49717
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iuc
parents:
diff
changeset
|
192 "407":6.023041146737167e-09, |
ae7c42d49717
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iuc
parents:
diff
changeset
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193 "414":5.844791249373782e-06, |
ae7c42d49717
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iuc
parents:
diff
changeset
|
194 "417":1.35252270798266e-09, |
ae7c42d49717
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iuc
parents:
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changeset
|
195 "418":0.0002946717374488142, |
ae7c42d49717
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iuc
parents:
diff
changeset
|
196 "419":2.325837885934838e-10, |
ae7c42d49717
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iuc
parents:
diff
changeset
|
197 "424":1.929854665115397e-05, |
ae7c42d49717
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iuc
parents:
diff
changeset
|
198 "425":8.20012614644675e-05, |
ae7c42d49717
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iuc
parents:
diff
changeset
|
199 "426":4.822853182787663e-05, |
ae7c42d49717
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iuc
parents:
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changeset
|
200 "433":0.001868063738600832, |
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iuc
parents:
diff
changeset
|
201 "437":3.538850116792625e-27, |
ae7c42d49717
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iuc
parents:
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changeset
|
202 "440":0.08010977685280053, |
ae7c42d49717
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iuc
parents:
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changeset
|
203 "448":0.07606312788914485, |
ae7c42d49717
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iuc
parents:
diff
changeset
|
204 "45":5.811735655101648e-16, |
ae7c42d49717
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iuc
parents:
diff
changeset
|
205 "453":0.03671194147765044, |
ae7c42d49717
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iuc
parents:
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changeset
|
206 "455":0.02091509793683489, |
ae7c42d49717
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iuc
parents:
diff
changeset
|
207 "458":0.07150971750425916, |
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iuc
parents:
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changeset
|
208 "460":0.7998321443046799, |
ae7c42d49717
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iuc
parents:
diff
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209 "461":1, |
ae7c42d49717
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iuc
parents:
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210 "464":0.001724550519344097, |
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iuc
parents:
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211 "466":0.0008356143264203861, |
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iuc
parents:
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212 "467":1.657561796358788e-05, |
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iuc
parents:
diff
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213 "468":1.348444812921266e-23, |
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iuc
parents:
diff
changeset
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214 "498":1.148320825350936e-24, |
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iuc
parents:
diff
changeset
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215 "50":8.32428744865e-23, |
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iuc
parents:
diff
changeset
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216 "509":1.189408841111924e-08, |
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iuc
parents:
diff
changeset
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217 "511":2.022119078897978e-24, |
ae7c42d49717
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iuc
parents:
diff
changeset
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218 "513":3.201599896136264e-07, |
ae7c42d49717
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iuc
parents:
diff
changeset
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219 "518":2.988923843741992e-13, |
ae7c42d49717
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iuc
parents:
diff
changeset
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220 "522":2.646016563727863e-07, |
ae7c42d49717
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iuc
parents:
diff
changeset
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221 "524":2.999275395428511e-07, |
ae7c42d49717
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iuc
parents:
diff
changeset
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222 "531":7.048583824652365e-06, |
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iuc
parents:
diff
changeset
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223 "532":8.871326441721272e-07, |
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iuc
parents:
diff
changeset
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224 "534":0.008873756999646102, |
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iuc
parents:
diff
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225 "535":0.004214591771216962, |
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iuc
parents:
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changeset
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226 "542":0.08914224508165824, |
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iuc
parents:
diff
changeset
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227 "553":7.90490584470731e-05, |
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iuc
parents:
diff
changeset
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228 "57":2.385720839099584e-24, |
ae7c42d49717
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iuc
parents:
diff
changeset
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229 "570":9.913916137860915e-09, |
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iuc
parents:
diff
changeset
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230 "572":4.275862281976158e-10, |
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iuc
parents:
diff
changeset
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231 "584":3.314094298879245e-10, |
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iuc
parents:
diff
changeset
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232 "587":3.973343100406481e-07, |
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iuc
parents:
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233 "590":4.873195666004712e-11, |
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iuc
parents:
diff
changeset
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234 "598":6.298174788936176e-09, |
ae7c42d49717
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iuc
parents:
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235 "60":1.133242133399893e-14, |
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iuc
parents:
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changeset
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236 "600":7.913894896186118e-20, |
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iuc
parents:
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changeset
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237 "61":2.995574404290199e-12, |
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iuc
parents:
diff
changeset
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238 "610":4.210551218094785e-06, |
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iuc
parents:
diff
changeset
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239 "615":9.779938062686411e-06, |
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iuc
parents:
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changeset
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240 "617":3.115657726300164e-05, |
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iuc
parents:
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changeset
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241 "626":1.626356028661979e-05, |
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iuc
parents:
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changeset
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242 "631":1.964642052027623e-05, |
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iuc
parents:
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changeset
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243 "635":2.944226387161727e-05, |
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iuc
parents:
diff
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244 "638":3.016399268517012e-06, |
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iuc
parents:
diff
changeset
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245 "639":2.178996517448726e-17, |
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iuc
parents:
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changeset
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246 "650":7.796278074051867e-11, |
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iuc
parents:
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247 "662":8.522743624982774e-11, |
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iuc
parents:
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changeset
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248 "665":2.026783501294749e-13, |
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iuc
parents:
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249 "671":1.546378067090648e-12, |
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iuc
parents:
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250 "675":0.002961528524188881, |
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iuc
parents:
diff
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251 "677":2.552472267524399e-10, |
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iuc
parents:
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changeset
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252 "681":0.02600692507802804, |
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iuc
parents:
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changeset
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253 "682":0.005058690616537698, |
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iuc
parents:
diff
changeset
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254 "689":2.914183309131261e-06, |
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iuc
parents:
diff
changeset
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255 "692":0.3722918462191203, |
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iuc
parents:
diff
changeset
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256 "696":0.002394988564901264, |
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iuc
parents:
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changeset
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257 "702":0.1907562583825546, |
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iuc
parents:
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changeset
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258 "707":1.690629082138237e-08, |
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iuc
parents:
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changeset
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259 "710":7.270598199039235e-12, |
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iuc
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260 "719":1.193577032271698e-24, |
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iuc
parents:
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261 "722":6.242541477357492e-12, |
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iuc
parents:
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262 "725":2.246819705265767e-24, |
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iuc
parents:
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263 "749":1.075902126658883e-29, |
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iuc
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264 "75":1.958058873662239e-39, |
ae7c42d49717
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iuc
parents:
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265 "758":1.862151711463288e-23, |
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iuc
parents:
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266 "759":5.809642307223274e-30, |
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iuc
parents:
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changeset
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267 "761":7.82644516929739e-23, |
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iuc
parents:
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changeset
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268 "767":6.985390677891108e-34, |
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iuc
parents:
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changeset
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269 "773":1.159688507258433e-33, |
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iuc
parents:
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270 "78":8.369563434460729e-21, |
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iuc
parents:
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changeset
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271 "794":2.615288564009047e-34, |
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iuc
parents:
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272 "803":3.007434714722189e-27, |
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iuc
parents:
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273 "810":6.65516462801252e-34, |
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iuc
parents:
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changeset
|
274 "812":2.065239894547715e-33, |
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iuc
parents:
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changeset
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275 "83":1.903013516419069e-15, |
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iuc
parents:
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changeset
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276 "833":1.55354314155857e-30, |
ae7c42d49717
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iuc
parents:
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changeset
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277 "834":5.458420523940027e-37, |
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iuc
parents:
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changeset
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278 "836":1.227693373364261e-29, |
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iuc
parents:
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changeset
|
279 "845":2.516382791081784e-31, |
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iuc
parents:
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changeset
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280 "848":5.804977376214689e-37, |
ae7c42d49717
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iuc
parents:
diff
changeset
|
281 "863":2.868441667452538e-42, |
ae7c42d49717
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iuc
parents:
diff
changeset
|
282 "872":1.784676508419814e-43, |
ae7c42d49717
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iuc
parents:
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changeset
|
283 "878":2.0081213960433e-43, |
ae7c42d49717
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iuc
parents:
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changeset
|
284 "887":1.13493422288884e-43, |
ae7c42d49717
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iuc
parents:
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changeset
|
285 "891":1.700300743179312e-36, |
ae7c42d49717
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iuc
parents:
diff
changeset
|
286 "905":1.109981525417329e-42, |
ae7c42d49717
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iuc
parents:
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287 "911":2.50641030292061e-44, |
ae7c42d49717
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iuc
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288 "917":1.208124588626152e-44, |
ae7c42d49717
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iuc
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289 "926":5.840308910078806e-45, |
ae7c42d49717
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iuc
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290 "932":2.793211015138247e-45, |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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291 "935":4.67970437488018e-44, |
ae7c42d49717
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iuc
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292 "94":9.387247404190512e-24, |
ae7c42d49717
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iuc
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293 "942":6.30144926979359e-44, |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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294 "950":3.018547209001381e-44, |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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295 "978":2.723057526622017e-45, |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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296 "98":2.547710617920883e-27, |
ae7c42d49717
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iuc
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297 "983":2.72991889467319e-45, |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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298 "986":6.142043558494514e-45, |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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299 "992":1.349612353859241e-47, |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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300 "995":3.874956487042822e-49 |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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301 }, |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
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302 "timeElapsed":1045, |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
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303 "totalModelCount":4369, |
ae7c42d49717
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304 "trees":{ |
ae7c42d49717
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305 "0":{ |
ae7c42d49717
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iuc
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306 "newickString":"(((((((TREESPARROW_HENAN_1_2004:0.01973996359641645,TREESPARROW_HENAN_2_2004:0)Node6:0.006601594605919903,CHICKEN_HEBEI_326_2005:0.02877904543700591)Node5:0.002960697265622527,SWINE_ANHUI_2004:0.01220336915594569)Node4:0.004301817483024902,((DUCK_GUANGZHOU_20_2005:0.006496379151101181,(GOOSE_SHANTOU_2216_2005:0.008666763019733412,PEREGRINEFALCON_HK_D0028_2004:0.006494907750172948)Node14:0)Node12:0.006529386248252737,CK_HK_WF157_2003:0.008749819170042668)Node11:0.006517868346508392)Node3:0.004369843971142481,((TREESPARROW_HENAN_3_2004:0.004310725480928182,((CHICKEN_HONGKONG_915_97:0,(HONGKONG_97_98:0.007234718327388172,HONGKONG_538_97:0)Node24:0)Node22:0,(GOOSE_HONGKONG_W355_97:0,DUCK_HONGKONG_Y283_97:0)Node27:0.002160209380619512)Node21:0.02651640051975179)Node19:0.002209468499615626,TREESPARROW_HENAN_4_2004:0.008707376458939551)Node18:0)Node2:0.01527162191938894,MALLARD_VIETNAM_16_2003:0.00216300836609909)Node1:0,HUMAN_VIETNAM_CL105_2005:0.01089634139979296,(((DUCK_VIETNAM_376_2005:0.002165747961920766,CHICKEN_THAILAND_KANCHANABURI_CK_160_2005:0.01092964139649115)Node35:0.002165571630784742,VIETNAM_3062_2004:0)Node34:0.002160659783816526,DUCK_VIETNAM_272_2005:0.006501625005083654)Node33:0)" |
ae7c42d49717
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307 }, |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
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308 "1":{ |
ae7c42d49717
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309 "newickString":"((((((TREESPARROW_HENAN_1_2004:0,TREESPARROW_HENAN_3_2004:0.01064277225673711)Node5:0.00531987705161906,TREESPARROW_HENAN_2_2004:0)Node4:0.005231591103466107,CHICKEN_HEBEI_326_2005:0.05043188754547531)Node3:0.005435427857192481,CK_HK_WF157_2003:0)Node2:0.005367407450692448,((TREESPARROW_HENAN_4_2004:0.005403333058615208,(((CHICKEN_HONGKONG_915_97:0,(GOOSE_HONGKONG_W355_97:0,DUCK_HONGKONG_Y283_97:0)Node18:0.005303893633648769)Node16:0,HONGKONG_97_98:0)Node15:0,HONGKONG_538_97:0)Node14:0.0160450339521957)Node12:0.01065583332597595,((DUCK_GUANGZHOU_20_2005:0.02156617952480121,GOOSE_SHANTOU_2216_2005:0.005315754078746889)Node24:0,PEREGRINEFALCON_HK_D0028_2004:0.005310132566451705)Node23:0)Node11:0.005324661683629481)Node1:0.01075596871747344,(SWINE_ANHUI_2004:0.01612941661930485,DUCK_VIETNAM_272_2005:0.005332918418299072)Node28:0.005343017103483476,((HUMAN_VIETNAM_CL105_2005:0.01615610619083483,DUCK_VIETNAM_376_2005:0.01622595235090508)Node32:0.005403715853761346,(VIETNAM_3062_2004:0,(MALLARD_VIETNAM_16_2003:0.01066500623689393,CHICKEN_THAILAND_KANCHANABURI_CK_160_2005:0)Node37:0.005316372444723995)Node35:0)Node31:0)" |
ae7c42d49717
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310 }, |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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311 "2":{ |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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312 "newickString":"(((((((TREESPARROW_HENAN_1_2004:0.001954008187578416,TREESPARROW_HENAN_3_2004:0.003896316686452931)Node6:0.001938506890703636,TREESPARROW_HENAN_4_2004:0)Node5:0.005890390504717593,((CHICKEN_HEBEI_326_2005:0.0118071209154035,(SWINE_ANHUI_2004:0,TREESPARROW_HENAN_2_2004:0.001939618450410721)Node13:0.01383276182388132)Node11:0.009974147725569997,((CHICKEN_HONGKONG_915_97:0,GOOSE_HONGKONG_W355_97:0)Node17:0.001941847153562197,((DUCK_HONGKONG_Y283_97:0,HONGKONG_538_97:0)Node21:0,HONGKONG_97_98:0.005840445012127324)Node20:0.001942715072940801)Node16:0.01987446960589405)Node10:0.005913850464875198)Node4:0.005886750382502456,(((DUCK_GUANGZHOU_20_2005:0.003893604042162395,GOOSE_SHANTOU_2216_2005:0.003905435534305824)Node27:0.001941929040845811,PEREGRINEFALCON_HK_D0028_2004:0.003899037680959845)Node26:0.001951590047476092,CK_HK_WF157_2003:0.005864286435734769)Node25:0.001925781157666145)Node3:0.009803928769016717,DUCK_VIETNAM_272_2005:0.01580156952635168)Node2:0,CHICKEN_THAILAND_KANCHANABURI_CK_160_2005:0.003890598353658968)Node1:0,((HUMAN_VIETNAM_CL105_2005:0.003905371265795895,DUCK_VIETNAM_376_2005:0.0137665342243657)Node35:0.001932867193851192,MALLARD_VIETNAM_16_2003:0.003887459835724038)Node34:0,VIETNAM_3062_2004:0.00194102772512571)" |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
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313 }, |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
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314 "3":{ |
ae7c42d49717
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iuc
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315 "newickString":"(TREESPARROW_HENAN_1_2004:0,((TREESPARROW_HENAN_3_2004:0.005713571370335148,TREESPARROW_HENAN_4_2004:0)Node3:0.00189607429178233,(CHICKEN_HEBEI_326_2005:0.005712316903324198,(SWINE_ANHUI_2004:0.005701998731046575,(((CHICKEN_HONGKONG_915_97:0,HONGKONG_97_98:0)Node12:0.001895621658683188,(GOOSE_HONGKONG_W355_97:0,HONGKONG_538_97:0)Node15:0)Node11:0.01534803500036186,((DUCK_HONGKONG_Y283_97:0.0001941011375241317,(((HUMAN_VIETNAM_CL105_2005:0.001928158212296621,DUCK_VIETNAM_376_2005:0.003824815472812549)Node23:0.001900556734363341,(VIETNAM_3062_2004:0.001945118440015516,MALLARD_VIETNAM_16_2003:0)Node26:0)Node22:0,(CHICKEN_THAILAND_KANCHANABURI_CK_160_2005:0.00380825293990655,DUCK_VIETNAM_272_2005:0.005749159769097136)Node29:0.001884324589239026)Node21:0.006136201619836659)Node19:0.006956231732180768,(((DUCK_GUANGZHOU_20_2005:0.003782134609270667,GOOSE_SHANTOU_2216_2005:0.005745814969410696)Node34:0.005728903718080784,PEREGRINEFALCON_HK_D0028_2004:0)Node33:0.001883474579815808,CK_HK_WF157_2003:0.005783922057126199)Node32:0.003686703559509533)Node18:0.002359028413665987)Node10:0.003781653021946557)Node8:0.003836413220384994)Node6:0.001894177236914572)Node2:0,TREESPARROW_HENAN_2_2004:0.00767492225272676)" |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
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316 } |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
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317 } |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
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318 } |