Mercurial > repos > iuc > hyphy_sm19
annotate test-data/fel-out1.json @ 19:466217f0aa76 draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 22226cfa6cd1eaf04b0a77f4b3a0a9d38430df00"
author | iuc |
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date | Thu, 07 Jan 2021 23:23:49 +0000 (2021-01-07) |
parents | ae7c42d49717 |
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ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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1 { |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
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2 "analysis":{ |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
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3 "info":"FEL (Fixed Effects Likelihood)\n estimates site-wise synonymous (α) and non-synonymous (β) rates, and\n uses a likelihood ratio test to determine if beta &neq; alpha at a site.\n The estimates aggregate information over all branches,\n so the signal is derived from\n pervasive diversification or conservation. A subset of branches can be selected\n for testing as well, in which case an additional (nuisance) parameter will be\n inferred -- the non-synonymous rate on branches NOT selected for testing.\n Multiple partitions within a NEXUS file are also supported\n for recombination - aware analysis.\n ", |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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4 "version":"2.00", |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
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5 "citation":"Not So Different After All: A Comparison of Methods for Detecting Amino Acid Sites Under Selection (2005). _Mol Biol Evol_ 22 (5): 1208-1222", |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
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6 "authors":"Sergei L Kosakovsky Pond and Simon DW Frost", |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
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7 "contact":"spond@temple.edu", |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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8 "requirements":"in-frame codon alignment and a phylogenetic tree" |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
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9 }, |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
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10 "input":{ |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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11 "file name":"/Users/stephenshank/Documents/Data/Datamonkey/CD2.fasta", |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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12 "number of sequences":10, |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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13 "number of sites":187, |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
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14 "partition count":1, |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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15 "trees":{ |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
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16 "0":"((((Pig:0.147969,Cow:0.21343)Node3:0.085099,Horse:0.165787,Cat:0.264806)Node2:0.058611,((RhMonkey:0.002015,Baboon:0.003108)Node9:0.022733,(Human:0.004349,Chimp:0.000799)Node12:0.011873)Node8:0.101856)Node1:0.340802,Rat:0.050958,Mouse:0.09795)" |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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17 } |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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18 }, |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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19 "fits":{ |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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20 "Nucleotide GTR":{ |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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21 "Log Likelihood":-3531.963798530155, |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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22 "estimated parameters":24, |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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23 "AIC-c":7112.142458295762, |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
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24 "Equilibrium frequencies":[ |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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25 [0.3563279857397504], |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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26 [0.1837789661319073], |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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27 [0.2402852049910873], |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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28 [0.2196078431372549] |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
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29 ], |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
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30 "Rate Distributions":{ |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
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31 "Substitution rate from nucleotide A to nucleotide C":0.5474490057204714, |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
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32 "Substitution rate from nucleotide A to nucleotide G":1, |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
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33 "Substitution rate from nucleotide A to nucleotide T":0.2645352969683238, |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
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34 "Substitution rate from nucleotide C to nucleotide G":0.4863078374555331, |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
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35 "Substitution rate from nucleotide C to nucleotide T":1.018028772244997, |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
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36 "Substitution rate from nucleotide G to nucleotide T":0.3025951149895378 |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
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37 }, |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
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38 "display order":0 |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
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39 }, |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
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40 "Global MG94xREV":{ |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
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41 "Log Likelihood":-3466.725508616141, |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
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42 "estimated parameters":31, |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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43 "AIC-c":6996.530451399855, |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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44 "Equilibrium frequencies":[ |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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45 [0.04785168648208005], |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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46 [0.03911346079312019], |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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47 [0.04842054060317301], |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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48 [0.04069665666515385], |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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49 [0.01817010744778396], |
ae7c42d49717
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50 [0.01485205303123071], |
ae7c42d49717
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51 [0.01838611113045968], |
ae7c42d49717
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52 [0.01545321970309948], |
ae7c42d49717
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53 [0.0190138898893362], |
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54 [0.01554175184587827], |
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77 [0.03287895020631181], |
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iuc
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78 [0.02687490503171972], |
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iuc
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|
79 [0.033269810543681], |
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iuc
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|
80 [0.0279627207822247], |
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iuc
parents:
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|
81 [0.01248470225271473], |
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iuc
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|
82 [0.01020486315060615], |
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iuc
parents:
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|
83 [0.01263311863778268], |
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iuc
parents:
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|
84 [0.01061792547971484], |
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iuc
parents:
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|
85 [0.01306446616325414], |
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iuc
parents:
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|
86 [0.01067875601941112], |
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iuc
parents:
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|
87 [0.01321977470017749], |
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iuc
parents:
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|
88 [0.01111100011404158], |
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iuc
parents:
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|
89 [0.01921770557551369], |
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iuc
parents:
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|
90 [0.01570834862514353], |
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iuc
parents:
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|
91 [0.01944616295744266], |
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iuc
parents:
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|
92 [0.01634417558076203], |
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iuc
parents:
diff
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|
93 [0.01975257768318274], |
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iuc
parents:
diff
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|
94 [0.02055210293142003], |
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iuc
parents:
diff
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|
95 [0.009176034326710849], |
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iuc
parents:
diff
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|
96 [0.007500393094996483], |
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iuc
parents:
diff
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|
97 [0.00928511773266342], |
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iuc
parents:
diff
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|
98 [0.007803986567571961], |
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iuc
parents:
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|
99 [0.00784869593340758], |
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iuc
parents:
diff
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|
100 [0.009716299514778986], |
ae7c42d49717
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iuc
parents:
diff
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|
101 [0.008166387662818644], |
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iuc
parents:
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|
102 [0.01412467213650941], |
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iuc
parents:
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|
103 [0.01154535713247913], |
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iuc
parents:
diff
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|
104 [0.01429258425298098], |
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iuc
parents:
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105 [0.01201267864744234] |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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106 ], |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
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107 "Rate Distributions":{ |
ae7c42d49717
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108 "non-synonymous/synonymous rate ratio for *test*":[ |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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109 [0.9970623081401093, 1] |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
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110 ] |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
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111 }, |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
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112 "display order":1 |
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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
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113 } |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
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114 }, |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
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115 "timers":{ |
ae7c42d49717
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116 "Total time":{ |
ae7c42d49717
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iuc
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117 "timer":240, |
ae7c42d49717
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118 "order":0 |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
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119 }, |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
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120 "Model fitting":{ |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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121 "timer":21, |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
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122 "order":1 |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
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123 }, |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
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124 "FEL analysis":{ |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
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125 "timer":208, |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
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126 "order":2 |
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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
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127 } |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
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128 }, |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
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129 "tested":{ |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
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130 "0":{ |
ae7c42d49717
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131 "Pig":"test", |
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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
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132 "Cow":"test", |
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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
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133 "Node3":"test", |
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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
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134 "Horse":"test", |
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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
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135 "Cat":"test", |
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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
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136 "Node2":"test", |
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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
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137 "RhMonkey":"test", |
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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
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138 "Baboon":"test", |
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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
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139 "Node9":"test", |
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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
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140 "Human":"test", |
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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
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141 "Chimp":"test", |
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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
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142 "Node12":"test", |
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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
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143 "Node8":"test", |
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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
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144 "Node1":"test", |
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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
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145 "Rat":"test", |
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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
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146 "Mouse":"test" |
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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
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147 } |
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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
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148 }, |
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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
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149 "data partitions":{ |
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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
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150 "0":{ |
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151 "name":"fel.filter.default", |
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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
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152 "coverage":[ |
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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
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153 [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 142, 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 154, 155, 156, 157, 158, 159, 160, 161, 162, 163, 164, 165, 166, 167, 168, 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181, 182, 183, 184, 185, 186] |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
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154 ] |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
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155 } |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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156 }, |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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157 "branch attributes":{ |
ae7c42d49717
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iuc
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158 "0":{ |
ae7c42d49717
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iuc
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159 "Human":{ |
ae7c42d49717
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iuc
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160 "original name":"Human", |
ae7c42d49717
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iuc
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161 "Nucleotide GTR":0, |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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162 "Global MG94xREV":0 |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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163 }, |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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164 "Chimp":{ |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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165 "original name":"Chimp", |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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166 "Nucleotide GTR":0.001818647577470898, |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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167 "Global MG94xREV":0.001828142895085465 |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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168 }, |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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169 "Baboon":{ |
ae7c42d49717
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iuc
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170 "original name":"Baboon", |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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171 "Nucleotide GTR":0.001683434956773037, |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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172 "Global MG94xREV":0.001771624553208579 |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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173 }, |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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174 "RhMonkey":{ |
ae7c42d49717
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iuc
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175 "original name":"RhMonkey", |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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176 "Nucleotide GTR":0.003773669075849421, |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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177 "Global MG94xREV":0.003717699096857038 |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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178 }, |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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179 "Cow":{ |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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180 "original name":"Cow", |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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181 "Nucleotide GTR":0.2483322373763571, |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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182 "Global MG94xREV":0.2480141631033857 |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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183 }, |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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184 "Pig":{ |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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185 "original name":"Pig", |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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186 "Nucleotide GTR":0.187244836750842, |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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187 "Global MG94xREV":0.1926081878751187 |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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188 }, |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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189 "Horse":{ |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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190 "original name":"Horse", |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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191 "Nucleotide GTR":0.2091766851769093, |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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192 "Global MG94xREV":0.2111575880588217 |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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193 }, |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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194 "Cat":{ |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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195 "original name":"Cat", |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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196 "Nucleotide GTR":0.266381043956941, |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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197 "Global MG94xREV":0.273601177885004 |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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198 }, |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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199 "Mouse":{ |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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200 "original name":"Mouse", |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
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|
201 "Nucleotide GTR":0.1181831744338598, |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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202 "Global MG94xREV":0.1201847378516324 |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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203 }, |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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204 "Rat":{ |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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205 "original name":"Rat", |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
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206 "Nucleotide GTR":0.06669700444436912, |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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207 "Global MG94xREV":0.0670850471739789 |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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208 }, |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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209 "Node1":{ |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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210 "Nucleotide GTR":0.276880831396131, |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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211 "Global MG94xREV":0.2843521449765504 |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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212 }, |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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213 "Node12":{ |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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214 "Nucleotide GTR":0.01783434870161725, |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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215 "Global MG94xREV":0.01788794906051452 |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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216 }, |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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217 "Node2":{ |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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218 "Nucleotide GTR":0.06617535490721377, |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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219 "Global MG94xREV":0.06447679597474805 |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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220 }, |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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221 "Node3":{ |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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222 "Nucleotide GTR":0.09884524766349881, |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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223 "Global MG94xREV":0.1017497956116402 |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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224 }, |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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225 "Node8":{ |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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226 "Nucleotide GTR":0.1061610073141143, |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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227 "Global MG94xREV":0.1093806684969149 |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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228 }, |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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229 "Node9":{ |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
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230 "Nucleotide GTR":0.02568007351415409, |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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231 "Global MG94xREV":0.02593963430985144 |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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232 } |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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233 }, |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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234 "attributes":{ |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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235 "original name":{ |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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236 "attribute type":"node label", |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
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237 "display order":-1 |
ae7c42d49717
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238 }, |
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239 "Nucleotide GTR":{ |
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240 "attribute type":"branch length", |
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241 "display order":0 |
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242 }, |
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243 "Global MG94xREV":{ |
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244 "attribute type":"branch length", |
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245 "display order":1 |
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iuc
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246 } |
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iuc
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247 } |
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248 }, |
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249 "MLE":{ |
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250 "headers":[ |
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iuc
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251 ["alpha", "Synonymous substitution rate at a site"], |
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iuc
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252 ["beta", "Non-synonymous substitution rate at a site"], |
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253 ["alpha=beta", "The rate estimate under the neutral model"], |
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iuc
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254 ["LRT", "Likelihood ration test statistic for beta = alpha, versus beta &neq; alpha"], |
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iuc
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255 ["p-value", "Likelihood ration test statistic for beta = alpha, versus beta &neq; alpha"], |
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256 ["Total branch length", "The total length of branches contributing to inference at this site, and used to scale dN-dS"] |
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257 ], |
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258 "content":{ |
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259 "0":[ |
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iuc
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ae7c42d49717
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iuc
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diff
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ae7c42d49717
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iuc
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diff
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ae7c42d49717
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iuc
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ae7c42d49717
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iuc
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ae7c42d49717
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iuc
parents:
diff
changeset
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ae7c42d49717
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iuc
parents:
diff
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ae7c42d49717
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iuc
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iuc
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iuc
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diff
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ae7c42d49717
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iuc
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ae7c42d49717
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iuc
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iuc
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diff
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ae7c42d49717
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iuc
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diff
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ae7c42d49717
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iuc
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iuc
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iuc
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ae7c42d49717
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iuc
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ae7c42d49717
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iuc
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ae7c42d49717
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iuc
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changeset
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ae7c42d49717
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iuc
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ae7c42d49717
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iuc
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iuc
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iuc
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iuc
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iuc
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ae7c42d49717
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iuc
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iuc
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changeset
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ae7c42d49717
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iuc
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iuc
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iuc
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changeset
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iuc
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changeset
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iuc
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iuc
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iuc
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iuc
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iuc
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changeset
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340 [2.775557561562891e-17, 1.479511936473496, 0.8595616248049279, 4.054419816108123, 0.04405585547270052, 1.896493175169415], |
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iuc
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iuc
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changeset
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iuc
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iuc
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iuc
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iuc
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iuc
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iuc
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iuc
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iuc
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iuc
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iuc
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iuc
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iuc
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iuc
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iuc
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diff
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iuc
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359 [1.688604795441202, 0.872115599385068, 0.9970309244905823, 0.2332631373879224, 0.6291147466886393, 1.870494163474329], |
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iuc
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diff
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ae7c42d49717
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iuc
parents:
diff
changeset
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361 [4.831079741237706e-15, 1.872227996629259, 1.338817825475637, 2.958050663671813, 0.08545090318855553, 2.399891160345569], |
ae7c42d49717
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iuc
parents:
diff
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362 [0, 0.3155926018515626, 0.227927233616331, 0.6389465390328013, 0.424092528291347, 0.4045382810307382], |
ae7c42d49717
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iuc
parents:
diff
changeset
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363 [0.5319815450678259, 1.26048510790621, 0.9545232457171584, 0.5399069382343029, 0.4624712968621087, 1.852832127998092], |
ae7c42d49717
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iuc
parents:
diff
changeset
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364 [6.3200939411278e-17, 0.2612399935967081, 0.2085046557787528, 0.4469288682907759, 0.5037970055265162, 0.3348670955087856], |
ae7c42d49717
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iuc
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diff
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iuc
parents:
diff
changeset
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366 [4.064293333262663e-16, 0.3147353092435951, 0.1892496296493958, 1.005211237068874, 0.316052818172837, 0.403439371626865], |
ae7c42d49717
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iuc
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367 [0, 0, 0, 0, 1, 0], |
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iuc
parents:
diff
changeset
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368 [2.246206053032266, 1.591915623888851, 1.775412838865879, 0.0923677564662384, 0.761188351384973, 3.041674429499818], |
ae7c42d49717
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iuc
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diff
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iuc
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diff
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ae7c42d49717
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iuc
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iuc
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iuc
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373 [0, 0, 0, 0, 1, 0], |
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iuc
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374 [7.778148691157165, 1.860650391600178, 2.849277056181007, 1.654663703771426, 0.1983253629031985, 5.851646798149392], |
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iuc
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diff
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iuc
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iuc
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iuc
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changeset
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iuc
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379 [1.197972684360613, 0, 0.3536531962660297, 4.702553000864214, 0.03011784771964165, 0.5339172300241064], |
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iuc
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iuc
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ae7c42d49717
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iuc
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iuc
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ae7c42d49717
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iuc
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ae7c42d49717
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iuc
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iuc
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iuc
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iuc
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changeset
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ae7c42d49717
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iuc
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389 [3.523567377334621, 0.2335304901191692, 0.6177263077025978, 4.228898713425224, 0.03974121895028215, 1.869745549217599], |
ae7c42d49717
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iuc
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changeset
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iuc
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changeset
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391 [3.872313743903038, 0.3001945145652326, 0.7495263599737007, 3.410817991154875, 0.064770332490796, 2.110628631346173], |
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iuc
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392 [1.348224506553748, 0, 0.5197532181393312, 3.550798210218449, 0.05951681303729162, 0.6008820596556348], |
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iuc
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iuc
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iuc
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changeset
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iuc
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changeset
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396 [0.1034310192418253, 1.892263187474957, 1.008923952682121, 1.276547568016404, 0.2585419448894165, 2.471670557698045], |
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iuc
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changeset
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iuc
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iuc
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changeset
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399 [1.275233552258837, 7.58672612865101, 6.266836228563596, 0.3981887367271355, 0.5280261541769634, 10.29329759095573], |
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iuc
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changeset
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400 [2.30657897102124e-14, 5.489421798035384, 3.571070021097467, 2.41593347948983, 0.1201063553307153, 7.036544091975854], |
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iuc
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iuc
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changeset
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402 [2.771180756542641, 1.796618778766233, 2.013958967103253, 0.1158698946809622, 0.7335578241908924, 3.538043325574558], |
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iuc
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iuc
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iuc
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iuc
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iuc
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changeset
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iuc
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iuc
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iuc
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iuc
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changeset
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iuc
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412 [0, 1.009408180447169, 0.7201317416266795, 1.906505699392216, 0.1673519284290025, 1.293896776352589], |
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iuc
parents:
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changeset
|
413 [1.701545575395463e-14, 1.16201561388296, 1.114130105107937, 0.2442491813364853, 0.6211538364843379, 1.489514634415266], |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
diff
changeset
|
414 [0.8883515458297054, 1.623622648529189, 1.334319744829745, 0.1803627821799836, 0.6710616565201941, 2.477143670911062], |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
diff
changeset
|
415 [0, 0.5570419450087813, 0.3610157342941877, 1.689213063741757, 0.193704737236408, 0.7140369881099469], |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
diff
changeset
|
416 [2.804120856177222e-15, 1.378683497609396, 1.139416739891161, 1.532228496397977, 0.215778295124767, 1.767247549328411], |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
diff
changeset
|
417 [0.630106498235145, 1.530183136222741, 1.176306017317766, 0.5627230344194487, 0.4531651666494674, 2.242273764894695], |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
diff
changeset
|
418 [4.996412325715582, 2.072849087019975, 2.501919619833955, 0.4374688424558926, 0.5083466741660978, 4.883875616363817], |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
diff
changeset
|
419 [1.476720795366284, 1.192713829097381, 1.265398043718104, 0.04756528081958322, 0.827355357807033, 2.187015539850353], |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
diff
changeset
|
420 [1.778599502537943, 2.833030015698272, 2.535624910277768, 0.2150914997093523, 0.642805674139892, 4.424176058896644], |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
diff
changeset
|
421 [1.502754420888704, 0.2825342556426603, 0.4733601919284142, 1.180637234982843, 0.2772263054246996, 1.031916435368656], |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
diff
changeset
|
422 [0, 0.2915937523113351, 0.2283654592452333, 0.4790160930559324, 0.4888683243803773, 0.3737756671964466], |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
diff
changeset
|
423 [10.08767614696688, 0, 0.4133910037948654, 8.462162631979279, 0.003626104567950983, 4.495915621518065], |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
diff
changeset
|
424 [1.984506219150062, 1.662771746660892, 1.756718773063347, 0.03121207319557584, 0.8597680862487451, 3.015865008244778], |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
diff
changeset
|
425 [3.805655301370652, 0, 0.7005303037771143, 11.62838958327228, 0.0006495276635800629, 1.696119588919385], |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
diff
changeset
|
426 [3.173406516538895, 2.860065663238961, 2.926441853316894, 0.003891888657044262, 0.9502562372040178, 5.080474489659786], |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
diff
changeset
|
427 [0, 0, 0, 0, 1, 0], |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
diff
changeset
|
428 [2.194271257132928, 4.019627316522699, 3.237226152191341, 0.09176983643381931, 0.7619391181878015, 6.130458650322728], |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
diff
changeset
|
429 [0, 0.2994174888128062, 0.1834705090468997, 0.9675444779876443, 0.3252933434590788, 0.3838044222970849], |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
diff
changeset
|
430 [1.737488918246139, 0.4263169813102716, 0.5705211950188817, 0.9504457433159637, 0.3296058631975952, 1.320839860569391], |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
diff
changeset
|
431 [9.491047642026737e-16, 2.201411562959478, 1.602398780540194, 2.916382754860905, 0.08768422447478674, 2.82185084281439], |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
diff
changeset
|
432 [1.033236674389839, 0.5673779129005597, 0.6682462878144323, 0.1916420169326862, 0.6615534805841186, 1.187783044398971], |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
diff
changeset
|
433 [0.6633763440867723, 2.065196310532788, 1.40713862608088, 0.9931353495817845, 0.318977273245592, 2.942901296371888], |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
diff
changeset
|
434 [3.88753619664278e-15, 1.779262169776622, 1.549159808629328, 1.288480285336618, 0.2563282037478503, 2.280724121673174], |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
diff
changeset
|
435 [137.6200023666397, 1.712312972734741, 2.612335663828599, 4.571254357285468, 0.03251275075427451, 63.52993609974021], |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
diff
changeset
|
436 [0.9069803858948896, 1.008331374883533, 0.9795641413367016, 0.006632998551161506, 0.9350894763840309, 1.696743112350582], |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
diff
changeset
|
437 [1.250218074119796, 2.685270528336648, 2.279331033581541, 0.4656302199387952, 0.4950043706394306, 3.99928134132692], |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
diff
changeset
|
438 [0.5981237480607854, 1.191515517605649, 0.9684057167421628, 0.3651500230254783, 0.5456598635374844, 1.793902873797072], |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
diff
changeset
|
439 [5.567356236371868, 1.655977785625157, 2.134648959148231, 0.8514639837247273, 0.3561385136046764, 4.60397510129604], |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
diff
changeset
|
440 [0, 0, 0, 0, 1, 0], |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
diff
changeset
|
441 [0.5915176036957202, 0.7772525687759813, 0.7215979531128016, 0.05398776775817282, 0.8162640993312603, 1.259941036310695], |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
diff
changeset
|
442 [0, 0.543676760549953, 0.4362855008937696, 0.8539326132569869, 0.3554421959431151, 0.6969049998601837], |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
diff
changeset
|
443 [1.00226665989553, 0.6268338660673796, 0.7169253651929272, 0.1172739583266811, 0.7320101172431673, 1.250193047146509], |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
diff
changeset
|
444 [0, 0, 0, 0, 1, 0], |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
diff
changeset
|
445 [0, 0, 0, 0, 1, 0], |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
diff
changeset
|
446 [2.797676857161142, 0.824684447244541, 1.167394064072366, 1.285234262338761, 0.2569280765461694, 2.303990803636788] |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
diff
changeset
|
447 ] |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
diff
changeset
|
448 } |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
diff
changeset
|
449 } |
ae7c42d49717
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
diff
changeset
|
450 } |