Mercurial > repos > iuc > hyphy_sm19
comparison macros.xml @ 4:c60fcdf8f01e draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit e31ca8967662206fc17d608efea398502569437a"
| author | iuc |
|---|---|
| date | Mon, 17 Feb 2020 14:53:22 -0500 |
| parents | a96a307afb40 |
| children | 5f1830cb9135 |
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| 3:a96a307afb40 | 4:c60fcdf8f01e |
|---|---|
| 78 <requirement type="package" version="@VERSION@"> | 78 <requirement type="package" version="@VERSION@"> |
| 79 hyphy</requirement> | 79 hyphy</requirement> |
| 80 <yield/> | 80 <yield/> |
| 81 </requirements> | 81 </requirements> |
| 82 </xml> | 82 </xml> |
| 83 <token name="@HYPHYMPI@">mpirun -np \${GALAXY_SLOTS:-1} HYPHYMPI</token> | 83 <token name="@HYPHYMPI@">\${GALAXY_MPIRUN:-mpirun -np \${GALAXY_SLOTS:-1}} HYPHYMPI</token> |
| 84 <token name="@HYPHY_ENVIRONMENT@"><![CDATA[export HYPHY=`which hyphy` && | 84 <token name="@HYPHY_ENVIRONMENT@"><![CDATA[export HYPHY=`which hyphy` && |
| 85 export HYPHY_PATH=`dirname \$HYPHY` && | 85 export HYPHY_PATH=`dirname \$HYPHY` && |
| 86 export HYPHY_LIB=`readlink -f \$HYPHY_PATH/../lib/hyphy` &&]]></token> | 86 export HYPHY_LIB=`readlink -f \$HYPHY_PATH/../lib/hyphy` &&]]></token> |
| 87 <token name="@HYPHY_INVOCATION@"><![CDATA[@HYPHY_ENVIRONMENT@ hyphy LIBPATH=\$HYPHY_LIB ]]></token> | 87 <token name="@HYPHY_INVOCATION@"><![CDATA[@HYPHY_ENVIRONMENT@ hyphy LIBPATH=\$HYPHY_LIB ]]></token> |
| 88 </macros> | 88 </macros> |