Mercurial > repos > iuc > hyphy_sm19
changeset 9:638942ba8e37 draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 8abccd4b7a288b6a321a6662eec88577ad83b36f"
| author | iuc |
|---|---|
| date | Wed, 22 Apr 2020 12:10:17 -0400 |
| parents | 6cf8d753e93e |
| children | 188452adcaa0 |
| files | hyphy_sm19.xml macros.xml |
| diffstat | 2 files changed, 7 insertions(+), 6 deletions(-) [+] |
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--- a/hyphy_sm19.xml Fri Mar 27 13:17:03 2020 -0400 +++ b/hyphy_sm19.xml Wed Apr 22 12:10:17 2020 -0400 @@ -13,6 +13,7 @@ '${partition.regex}' #end for $replicates + --output '$sm19_output' ]]></command> <inputs> <param name="input_file" type="data" format="nhx" label="Input tree"/> @@ -32,7 +33,7 @@ <param name="replicates" type="integer" min="1" max="1000000" value="100"/> </inputs> <outputs> - <data name="sm19_output" format="hyphy_results.json" from_work_dir="sm19_input.nhx.json"/> + <data name="sm19_output" format="hyphy_results.json" /> </outputs> <tests> <test> @@ -66,11 +67,11 @@ SM2019 : Structured Slatkin-Maddison ==================================== - + What does this do? ------------------ -Test for evidence of genetically segregated populations, using a "detuned" version of +Test for evidence of genetically segregated populations, using a "detuned" version of the Slatkin-Maddison test. Brief description @@ -108,8 +109,8 @@ 06,x_US_x_A_13C:-4.34574e-06):4.34574e-06,((x_US_x_A_08C:0.0029538, x_US_x_A_09C:-1.31511e-05):0.00296627,x_US_x_A_10C:-8.69148e-06):4. 34574e-06,x_US_x_A_15C:-4.34574e-06); - -Which can be partitioned into two groups of leaves, those that end in "P", and those that + +Which can be partitioned into two groups of leaves, those that end in "P", and those that end in "C" 1. Reg-exp 1: `P^`
--- a/macros.xml Fri Mar 27 13:17:03 2020 -0400 +++ b/macros.xml Wed Apr 22 12:10:17 2020 -0400 @@ -106,7 +106,7 @@ <yield/> </citations> </xml> - <token name="@VERSION@">2.5.8</token> + <token name="@VERSION@">2.5.9</token> <xml name="requirements"> <requirements> <requirement type="package" version="@VERSION@">hyphy</requirement>