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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/idba_ud commit 9c0a7395ca18043ae2dd957f39f47b65c938750a
author iuc
date Thu, 21 Jul 2022 13:35:37 +0000
parents a81c5169e9fc
children
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number of threads 4
reads 302
long reads 0
extra reads 0
read_length 76
kmer 20
kmers 728 727
merge bubble 0
contigs: 1 n50: 747 max: 747 mean: 747 total length: 747 n80: 747
aligned 300 reads
confirmed bases: 690 correct reads: 230 bases: 0
distance mean 214 sd 49.643
seed contigs 1 local contigs 2
kmer 40
kmers 710 709
merge bubble 0
contigs: 1 n50: 749 max: 749 mean: 749 total length: 749 n80: 749
aligned 302 reads
confirmed bases: 692 correct reads: 231 bases: 0
distance mean 213.649 sd 49.4062
seed contigs 1 local contigs 2
kmer 60
kmers 690 689
merge bubble 0
contigs: 1 n50: 749 max: 749 mean: 749 total length: 749 n80: 749
aligned 302 reads
confirmed bases: 692 correct reads: 231 bases: 0
distance mean 213.649 sd 49.4062
seed contigs 1 local contigs 2
kmer 80
kmers 670 669
merge bubble 0
contigs: 1 n50: 749 max: 749 mean: 749 total length: 749 n80: 749
aligned 302 reads
confirmed bases: 692 correct reads: 231 bases: 0
distance mean 213.649 sd 49.4062
seed contigs 1 local contigs 2
kmer 100
kmers 650 649
merge bubble 0
contigs: 1 n50: 749 max: 749 mean: 749 total length: 749 n80: 749
reads 302
aligned 302 reads
distance mean 213.649 sd 49.4062
expected coverage 0.448071
edgs 0
contigs: 1 n50: 749 max: 749 mean: 749 total length: 749 n80: 749