comparison idr_download_by_ids.xml @ 3:381f248febba draft

"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/idr_download commit 0ae8913ec1c14caedc9836d4889650ea836a1d70"

2:17b1cd0f4812

<?xml version="1.0"?>
<tool id="idr_download_by_ids" name="IDR Download" version="0.20" profile="18.09">
    <description>- download images from the Image Data Resource using image IDs</description>
    <macros>
        <xml name="region_spec" token_pos="upper-left corner">
            <param name="x_coord" type="integer" value="0" min="0"
            label="x-coordinate of region @POS@" />

**Input**

A set of image IDs as can be obtained from the IDR webclient_ like this:

1. select the images you want to download
2. click on the 'Link' button on the top right of the page and copy the provided
   URL
3. paste the URL into the input field of this tool, for example: ::

    https://idr.openmicroscopy.org/webclient/?show=image-9036708|image-9036710|image-9036711

Alternatively, you can simply provide a list of known image IDs in the text
input field (comma or '|'-separated ), or as an input file (each ID on a

3:381f248febba

<?xml version="1.0"?>
<tool id="idr_download_by_ids" name="IDR Download" version="0.30" profile="18.09">
    <description>- download images from the Image Data Resource using image IDs</description>
    <macros>
        <xml name="region_spec" token_pos="upper-left corner">
            <param name="x_coord" type="integer" value="0" min="0"
            label="x-coordinate of region @POS@" />

**Input**

A set of image IDs as can be obtained from the IDR webclient_ like this:

1. Select the wells you want to download in the thumbnails.

2. Select at the bottom the images in those wells that you want to download (one well might contain several images).

3. Click on the 'Link' button on the top right of the page and copy the provided URL.

4. Paste the URL into the input field of this tool, for example:

    https://idr.openmicroscopy.org/webclient/?show=image-9036708|image-9036710|image-9036711

Alternatively, you can simply provide a list of known image IDs in the text
input field (comma or '|'-separated ), or as an input file (each ID on a