comparison iqtree.xml @ 10:b8476e82ac20 draft

"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/iqtree/ commit 1bda7ff567a523740d76eea8d7df6db97c905693"

9:f58a10e2e46d

                        <param argument="--rcluster-max" type="integer" optional="true" label="Max number of partition pairs" />
                    </when>
                </conditional>
                <param argument="--mset" type="text" optional="true" label="Specify the name of a program (raxml, phyml or mrbayes) to restrict to only those models supported by the specified program" help="Alternatively, one can specify a comma-separated list of base models. For example, -mset WAG,LG,JTT will restrict model selection to WAG, LG, and JTT instead of all 18 AA models to save computations.">
                    <expand macro="sanitize_query"
                    validinitial="string.ascii_uppercase,string.punctuation" />
                </param>
                <param argument="--msub" type="select" label="Specify either nuclear, mitochondrial, chloroplast or viral to restrict to those AA models designed for specified source." help="">
                    <option value="nuclear">nuclear</option>
                    <option value="mitochondrial">mitochondrial</option>
                    <option value="chloroplast">chloroplast</option>

10:b8476e82ac20

                        <param argument="--rcluster-max" type="integer" optional="true" label="Max number of partition pairs" />
                    </when>
                </conditional>
                <param argument="--mset" type="text" optional="true" label="Specify the name of a program (raxml, phyml or mrbayes) to restrict to only those models supported by the specified program" help="Alternatively, one can specify a comma-separated list of base models. For example, -mset WAG,LG,JTT will restrict model selection to WAG, LG, and JTT instead of all 18 AA models to save computations.">
                    <expand macro="sanitize_query"
                    validinitial="string.ascii_letters,string.punctuation" />
                </param>
                <param argument="--msub" type="select" label="Specify either nuclear, mitochondrial, chloroplast or viral to restrict to those AA models designed for specified source." help="">
                    <option value="nuclear">nuclear</option>
                    <option value="mitochondrial">mitochondrial</option>
                    <option value="chloroplast">chloroplast</option>