Mercurial > repos > iuc > ivar_filtervariants
diff write_amplicon_info_file.py @ 10:0135f1d487a0 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ivar/ commit 8ce6fd9aee543d9e62db33a9c95f79d8dc4e6dea
author | iuc |
---|---|
date | Wed, 13 Jul 2022 15:19:34 +0000 |
parents | 47a27906d750 |
children |
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--- a/write_amplicon_info_file.py Fri Aug 20 20:32:33 2021 +0000 +++ b/write_amplicon_info_file.py Wed Jul 13 15:19:34 2022 +0000 @@ -10,7 +10,10 @@ def write_amplicon_info_file(bed_file, amplicon_info_file): amplicon_sets = {} for line in bed_file: - fields = line.strip().split('\t') + line = line.strip() + if not line: + continue + fields = line.split('\t') start = int(fields[1]) name = fields[3] re_match = AMPLICON_PAT.match(name)