Mercurial > repos > iuc > ivar_removereads

comparison ivar_removereads.xml @ 18:9f4805c61d29 draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ivar/ commit b548a504e88bd330f534be0dd018175c9341b1f1
author iuc
date Mon, 10 Feb 2025 15:10:52 +0000
parents 8c05afb547fa
children
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17:5dc33613c288 18:9f4805c61d29
1 <tool id="ivar_removereads" name="ivar removereads" version="@TOOL_VERSION@+galaxy0" profile="@PROFILE@"> 1 <tool id="ivar_removereads" name="ivar removereads" version="@TOOL_VERSION@+galaxy0" profile="@PROFILE@">
2 <description>Remove reads from trimmed BAM file</description> 2 <description>Remove reads from trimmed BAM file</description>
3 <macros> 3 <macros>
4 <import>macros.xml</import> 4 <import>macros.xml</import>
5 </macros> 5 </macros>
6 <expand macro="xrefs"/>
6 <expand macro="requirements"/> 7 <expand macro="requirements"/>
7 <expand macro="version_command"/> 8 <expand macro="version_command"/>
8 <command detect_errors="exit_code"><![CDATA[ 9 <command detect_errors="exit_code"><![CDATA[
9 cp '$input_bed' binding_sites.bed && 10 cp '$input_bed' binding_sites.bed &&
10 python '$__tool_directory__/sanitize_bed.py' binding_sites.bed && 11 python '$__tool_directory__/sanitize_bed.py' binding_sites.bed &&