Mercurial > repos > iuc > ivar_trim
annotate test-data/primer_scheme_bedfiles.loc @ 5:cf65217ad61c draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ivar/ commit a5ff06c631a2a5a0d5d44edd6cb58a599d50918b"
author | iuc |
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date | Wed, 19 May 2021 16:51:27 +0000 |
parents | cb903c9dc33d |
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cb903c9dc33d
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ivar/ commit 2d91c217cf30938da84dea51aa3c45a7789db0fc"
iuc
parents:
diff
changeset
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1 # this is a tab separated file describing the location of primer schemes used for amplicon |
cb903c9dc33d
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ivar/ commit 2d91c217cf30938da84dea51aa3c45a7789db0fc"
iuc
parents:
diff
changeset
|
2 # sequencing (e.g. using the ARTIC SARS-CoV-2 protocol) |
cb903c9dc33d
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ivar/ commit 2d91c217cf30938da84dea51aa3c45a7789db0fc"
iuc
parents:
diff
changeset
|
3 # |
cb903c9dc33d
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ivar/ commit 2d91c217cf30938da84dea51aa3c45a7789db0fc"
iuc
parents:
diff
changeset
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4 # the columns are: |
cb903c9dc33d
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ivar/ commit 2d91c217cf30938da84dea51aa3c45a7789db0fc"
iuc
parents:
diff
changeset
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5 # value description path |
cb903c9dc33d
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ivar/ commit 2d91c217cf30938da84dea51aa3c45a7789db0fc"
iuc
parents:
diff
changeset
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6 # |
cb903c9dc33d
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ivar/ commit 2d91c217cf30938da84dea51aa3c45a7789db0fc"
iuc
parents:
diff
changeset
|
7 # for example |
cb903c9dc33d
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ivar/ commit 2d91c217cf30938da84dea51aa3c45a7789db0fc"
iuc
parents:
diff
changeset
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8 SARS-CoV-2-ARTICv1 SARS-CoV-2-ARTIC v1 ${__HERE__}/sars-cov-2/SARS-CoV-2-ARTICv1.bed |