diff test-data/zika/Z52_b.tsv @ 0:8858fa037a15 draft

"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ivar/ commit 4b0b7fb6c79dcd437392a496a99301d124c9f1dd"

--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/zika/Z52_b.tsv	Mon Mar 30 07:31:25 2020 -0400
@@ -0,0 +1,24 @@
+REGION	POS	REF	ALT	REF_DP	REF_RV	REF_QUAL	ALT_DP	ALT_RV	ALT_QUAL	ALT_FREQ	TOTAL_DP	PVAL	PASS
+PRV	685	C	T	268	203	36	10	0	37	0.0359712	278	0.000867393	TRUE
+PRV	1682	C	T	1505	1475	37	50	50	37	0.0321543	1555	1.59703e-14	TRUE
+PRV	1721	A	T	27	0	36	1	0	38	0.0357143	28	0.509091	FALSE
+PRV	1818	A	T	31	31	37	1	1	37	0.03125	32	0.507937	FALSE
+PRV	1848	T	C	31	31	36	1	1	36	0.03125	32	0.5	FALSE
+PRV	1965	T	G	469	28	36	71	1	36	0.131481	540	1.31011e-23	TRUE
+PRV	2781	T	G	404	75	37	35	7	36	0.0788288	444	1.12705e-11	TRUE
+PRV	2922	C	T	277	0	36	19	0	34	0.0641892	296	1.46245e-06	TRUE
+PRV	3148	Y	T	0	0	0	1943	271	36	0.740473	2624	0	TRUE
+PRV	3148	Y	C	0	0	0	679	99	37	0.258765	2624	0	TRUE
+PRV	3295	A	G	1806	1806	36	69	69	34	0.0368	1875	2.28815e-20	TRUE
+PRV	3827	C	T	248	0	37	14	0	36	0.0534351	262	5.10688e-05	TRUE
+PRV	5680	C	T	38	5	50	7	1	49	0.155556	45	0.00133612	TRUE
+PRV	5683	G	-A	45	8	53	2	0	20	0.0444444	45	0.159299	FALSE
+PRV	6301	T	G	10	10	37	1	1	24	0.0909091	11	0.52381	FALSE
+PRV	6374	A	-AGAGTGCTCAAACCGAGGTGGATGGACGCC	12	12	37	1	0	20	0.0833333	12	0.52	FALSE
+PRV	6390	A	G	26	12	37	1	0	38	0.037037	27	0.5	FALSE
+PRV	6439	T	A	27	12	36	1	1	38	0.0357143	28	0.509091	FALSE
+PRV	6479	A	T	14	0	36	1	0	37	0.0666667	15	0.517241	FALSE
+PRV	7916	C	T	286	227	36	45	38	37	0.135952	331	4.31473e-15	TRUE
+PRV	8074	C	T	18	2	39	1	0	76	0.0526316	19	0.463415	FALSE
+PRV	9713	C	T	475	0	37	27	0	36	0.0537849	502	4.66646e-09	TRUE
+PRV	10227	G	T	533	528	37	18	18	37	0.0326087	552	2.31457e-06	TRUE