comparison macros.xml @ 2:8eb7dded0d52 draft

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/iwtomics commit 11ee7ac206d41894c0b6a11f2439aaea490824f0

1:ee7dd07a530e

        <param name="size" type="boolean" truevalue="TRUE" falsevalue="FALSE" checked="True" label="Plot sample size in each position" />
        <!-- conditional plot type -->
        <conditional name="conditionalplottype">
            <!-- plot type -->
            <param name="plottype" type="select" label="Plot type">
            <option value="boxplot">Pointwise quantile curves (boxplot)</option>
            <option value="curves">Curves (aligned)</option>
            </param>
            <!-- conditional choice: plottype=boxplot -->
            <when value="boxplot">
            <section name="probabilitiessection" title="Probabilities" expanded="True" help="Probabilities corresponding to the quantile curves to be drawn.">
                <param name="prob0" size="3" type="float" value="0.25" min="0.0" max="1.0" label="Probability" />
                <param name="prob1" size="3" type="float" value="0.5" min="0.0" max="1.0" label="Probability" />
                <param name="prob2" size="3" type="float" value="0.75" min="0.0" max="1.0" label="Probability" />
                <repeat name="probabilities" title="Probabilities">
                <param name="prob" size="3" type="float" value="0.5" min="0.0" max="1.0" label="Probability" />
                </repeat>
            </section>
            </when>
        </conditional>
    </xml>

    <xml name="plot-sum">
        <section name="plotsum" title="Summary plot" expanded="True">
            <!-- conditional group by -->
            <conditional name="conditionalgroupby">
                <!-- group by -->
                <param name="groupby" type="select" label="Group by" help="How tests should be grouped.">
                <option value="none">No plot</option>
                <option value="test">Group by test</option>
                <option value="feature">Group by feature</option>
                </param>
                <when value="test">
                <param name="testalphaplot" size="3" type="float" value="0.05" min="0.0" max="1.0" label="Level of the test (alpha)" />
                <param name="testonlysig" type="boolean" truevalue="TRUE" falsevalue="FALSE" label="Plot only significant tests" />
                </when>
                <when value="feature">
                <param name="featurealphaplot" size="3" type="float" value="0.05" min="0.0" max="1.0" label="Level of the test (alpha)" />
                <param name="featureonlysig" type="boolean" truevalue="TRUE" falsevalue="FALSE" label="Plot only significant tests" />
                </when>
            </conditional>
        </section>
    </xml>
</macros>

2:8eb7dded0d52

        <param name="size" type="boolean" truevalue="TRUE" falsevalue="FALSE" checked="True" label="Plot sample size in each position" />
        <!-- conditional plot type -->
        <conditional name="conditionalplottype">
            <!-- plot type -->
            <param name="plottype" type="select" label="Plot type">
                <option value="boxplot">Pointwise quantile curves (boxplot)</option>
                <option value="curves">Curves (aligned)</option>
            </param>
            <when value="boxplot">
                <section name="probabilitiessection" title="Probabilities" expanded="True" help="Probabilities corresponding to the quantile curves to be drawn.">
                    <param name="prob0" size="3" type="float" value="0.25" min="0.0" max="1.0" label="Probability" />
                    <param name="prob1" size="3" type="float" value="0.5" min="0.0" max="1.0" label="Probability" />
                    <param name="prob2" size="3" type="float" value="0.75" min="0.0" max="1.0" label="Probability" />
                    <repeat name="probabilities" title="Probabilities">
                        <param name="prob" size="3" type="float" value="0.5" min="0.0" max="1.0" label="Probability" />
                    </repeat>
                </section>
            </when>
            <when value="curves" />
        </conditional>
    </xml>

    <xml name="plot-sum">
        <section name="plotsum" title="Summary plot" expanded="True">
            <!-- conditional group by -->
            <conditional name="conditionalgroupby">
                <!-- group by -->
                <param name="groupby" type="select" label="Group by" help="How tests should be grouped.">
                    <option value="none">No plot</option>
                    <option value="test">Group by test</option>
                    <option value="feature">Group by feature</option>
                </param>
                <when value="none" />
                <when value="test">
                    <param name="testalphaplot" size="3" type="float" value="0.05" min="0.0" max="1.0" label="Level of the test (alpha)" />
                    <param name="testonlysig" type="boolean" truevalue="TRUE" falsevalue="FALSE" label="Plot only significant tests" />
                </when>
                <when value="feature">
                    <param name="featurealphaplot" size="3" type="float" value="0.05" min="0.0" max="1.0" label="Level of the test (alpha)" />
                    <param name="featureonlysig" type="boolean" truevalue="TRUE" falsevalue="FALSE" label="Plot only significant tests" />
                </when>
            </conditional>
        </section>
    </xml>
</macros>